View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18276_low_16 (Length: 309)
Name: NF18276_low_16
Description: NF18276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18276_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 35866330 - 35866628
Alignment:
| Q |
1 |
tcgtttctcctatcaaaaagataacacacaagtcaaattgctttaaaagtgactaatattgcaataagttactattctgcttaagttatttaactatcca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
35866330 |
tcgtttctcctatcaaaaagataacacacaagtcaaattgctttaaaagtgactaatattgcaataagttactattctgcttaacttatttaactatcca |
35866429 |
T |
|
| Q |
101 |
aagtttcaaacaagctcttactgtgttcaacatgtgttttttagtgcctaatgacttttctatagtatagaaagtggaacttactcgtaattaacattat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35866430 |
aagtttcaaacaagctcttactgtgttcaacatgtgttttttagtgcctaatgacttttctatagtatagaaagtggaacttactcgtaattaacattat |
35866529 |
T |
|
| Q |
201 |
aatcctaagtttgtaaaataaaccattagaccaagaagcttaacaggggagtaaaaaatttgatcaattgggacaattaaactcattctttggcctttg |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
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| T |
35866530 |
aatcctaagtttgtaaaataaaccattagaccaagaagcttaacaggggagtaaaaaatttgatcaattgggacaataaaactcattctttggtctttg |
35866628 |
T |
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