View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18276_low_6 (Length: 457)

Name: NF18276_low_6
Description: NF18276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18276_low_6
NF18276_low_6
[»] chr4 (66 HSPs)
chr4 (17-363)||(52963451-52963804)
chr4 (129-367)||(40792752-40792988)
chr4 (129-270)||(2310924-2311065)
chr4 (154-363)||(52241037-52241245)
chr4 (129-272)||(390218-390361)
chr4 (129-275)||(42871096-42871242)
chr4 (129-306)||(393575-393753)
chr4 (129-302)||(2312421-2312597)
chr4 (129-306)||(6348156-6348333)
chr4 (151-273)||(37882857-37882981)
chr4 (129-328)||(1829754-1829954)
chr4 (163-367)||(7708665-7708869)
chr4 (129-337)||(1587183-1587392)
chr4 (154-367)||(23203830-23204043)
chr4 (120-237)||(24426331-24426448)
chr4 (129-252)||(4128994-4129117)
chr4 (129-328)||(42810118-42810318)
chr4 (129-278)||(1188844-1188994)
chr4 (151-302)||(11968534-11968687)
chr4 (154-342)||(53435654-53435843)
chr4 (129-341)||(1794412-1794627)
chr4 (141-337)||(13533168-13533363)
chr4 (129-302)||(27850878-27851047)
chr4 (151-278)||(44503644-44503771)
chr4 (129-302)||(52239878-52240053)
chr4 (129-255)||(4871352-4871479)
chr4 (129-278)||(11438533-11438683)
chr4 (129-239)||(44501519-44501629)
chr4 (130-304)||(6349490-6349667)
chr4 (154-303)||(13165522-13165671)
chr4 (144-238)||(54485551-54485645)
chr4 (129-238)||(1190198-1190307)
chr4 (129-293)||(1588037-1588204)
chr4 (254-367)||(2311080-2311192)
chr4 (154-336)||(10168689-10168873)
chr4 (151-274)||(27847701-27847824)
chr4 (129-302)||(15450015-15450190)
chr4 (129-235)||(42872308-42872414)
chr4 (129-238)||(49344015-49344125)
chr4 (129-238)||(1831269-1831378)
chr4 (129-238)||(31968398-31968507)
chr4 (154-278)||(53432088-53432213)
chr4 (150-238)||(53204383-53204471)
chr4 (129-237)||(55764342-55764450)
chr4 (129-256)||(31965836-31965963)
chr4 (129-275)||(53205451-53205598)
chr4 (164-278)||(33232664-33232777)
chr4 (154-302)||(7707614-7707765)
chr4 (129-278)||(37884243-37884392)
chr4 (129-237)||(55828786-55828894)
chr4 (220-278)||(13166734-13166793)
chr4 (152-269)||(54484336-54484455)
chr4 (164-302)||(40723264-40723402)
chr4 (196-272)||(5591421-5591498)
chr4 (196-272)||(48126872-48126949)
chr4 (157-278)||(50548190-50548310)
chr4 (154-263)||(54866612-54866720)
chr4 (224-303)||(4714116-4714196)
chr4 (196-303)||(22069303-22069411)
chr4 (152-295)||(49342643-49342787)
chr4 (154-300)||(33231415-33231563)
chr4 (239-302)||(44498573-44498636)
chr4 (154-238)||(10167451-10167535)
chr4 (238-302)||(56085458-56085522)
chr4 (154-269)||(54865131-54865245)
chr4 (154-238)||(50546932-50547016)
[»] chr3 (57 HSPs)
chr3 (129-367)||(40244188-40244425)
chr3 (129-367)||(34818087-34818325)
chr3 (129-367)||(38240907-38241144)
chr3 (154-367)||(27837946-27838158)
chr3 (154-367)||(35372036-35372248)
chr3 (153-367)||(40745343-40745557)
chr3 (129-337)||(53624269-53624476)
chr3 (163-326)||(10730920-10731083)
chr3 (151-328)||(18197170-18197340)
chr3 (154-362)||(26887437-26887645)
chr3 (151-300)||(38242458-38242609)
chr3 (142-323)||(53420330-53420513)
chr3 (129-236)||(37736089-37736196)
chr3 (129-239)||(18458662-18458772)
chr3 (129-239)||(37735307-37735417)
chr3 (154-367)||(41263664-41263877)
chr3 (152-276)||(53194837-53194962)
chr3 (135-269)||(50810808-50810943)
chr3 (135-269)||(50864921-50865056)
chr3 (129-300)||(3208485-3208658)
chr3 (131-278)||(18442255-18442399)
chr3 (131-278)||(19487329-19487473)
chr3 (129-278)||(40364320-40364470)
chr3 (129-337)||(42684880-42685086)
chr3 (154-367)||(53612897-53613101)
chr3 (251-367)||(3209843-3209959)
chr3 (135-269)||(50809428-50809563)
chr3 (135-269)||(50866299-50866434)
chr3 (141-278)||(20288189-20288327)
chr3 (129-238)||(36176512-36176622)
chr3 (129-304)||(12107917-12108098)
chr3 (129-273)||(24403240-24403385)
chr3 (129-238)||(53187560-53187668)
chr3 (171-275)||(36175306-36175410)
chr3 (141-302)||(3455565-3455728)
chr3 (129-238)||(41544663-41544772)
chr3 (149-238)||(53421767-53421856)
chr3 (129-302)||(34819225-34819399)
chr3 (154-239)||(41264658-41264743)
chr3 (199-278)||(20336622-20336702)
chr3 (183-306)||(12106629-12106752)
chr3 (144-302)||(28909548-28909705)
chr3 (124-191)||(55328358-55328425)
chr3 (282-367)||(42592693-42592778)
chr3 (139-191)||(8796366-8796418)
chr3 (199-270)||(20314737-20314809)
chr3 (129-191)||(3209984-3210046)
chr3 (120-174)||(8795932-8795986)
chr3 (129-306)||(23443394-23443572)
chr3 (154-264)||(26886298-26886407)
chr3 (169-237)||(3807980-3808048)
chr3 (154-302)||(53614213-53614363)
chr3 (151-191)||(12105313-12105353)
chr3 (134-238)||(38247482-38247586)
chr3 (260-328)||(43346365-43346433)
chr3 (169-237)||(44182323-44182391)
chr3 (166-285)||(53622700-53622822)
[»] chr7 (52 HSPs)
chr7 (129-367)||(43459456-43459694)
chr7 (129-367)||(32256273-32256510)
chr7 (129-328)||(47454338-47454537)
chr7 (141-367)||(11501193-11501419)
chr7 (214-367)||(22337248-22337401)
chr7 (154-363)||(22538729-22538938)
chr7 (136-363)||(41079716-41079942)
chr7 (129-327)||(6173369-6173565)
chr7 (149-315)||(47060404-47060570)
chr7 (129-306)||(47456320-47456490)
chr7 (129-320)||(40509658-40509849)
chr7 (129-239)||(32602934-32603044)
chr7 (154-363)||(40812491-40812703)
chr7 (124-256)||(45455360-45455492)
chr7 (139-238)||(30333296-30333395)
chr7 (129-275)||(40508379-40508526)
chr7 (129-320)||(4299972-4300163)
chr7 (129-306)||(47059109-47059288)
chr7 (151-320)||(22115088-22115257)
chr7 (120-276)||(30310113-30310270)
chr7 (141-337)||(9662144-9662339)
chr7 (129-294)||(33779036-33779199)
chr7 (141-337)||(3413545-3413742)
chr7 (151-302)||(43460763-43460916)
chr7 (144-274)||(11344523-11344651)
chr7 (154-367)||(13562848-13563052)
chr7 (129-238)||(30311475-30311584)
chr7 (129-238)||(45454039-45454148)
chr7 (151-302)||(32255012-32255166)
chr7 (135-237)||(30334648-30334746)
chr7 (129-238)||(33096870-33096979)
chr7 (129-275)||(24282944-24283090)
chr7 (129-238)||(4298714-4298823)
chr7 (154-302)||(13564179-13564329)
chr7 (154-302)||(22336005-22336155)
chr7 (141-302)||(11502361-11502525)
chr7 (145-238)||(24281091-24281185)
chr7 (239-285)||(15992247-15992293)
chr7 (161-269)||(22690400-22690509)
chr7 (144-238)||(3414840-3414934)
chr7 (197-266)||(24844330-24844399)
chr7 (129-182)||(40811341-40811394)
chr7 (245-337)||(669295-669386)
chr7 (164-264)||(22537595-22537694)
chr7 (154-256)||(25533214-25533317)
chr7 (129-239)||(35664286-35664396)
chr7 (141-238)||(40738844-40738942)
chr7 (246-324)||(44554687-44554764)
chr7 (129-239)||(46835676-46835786)
chr7 (245-302)||(2414863-2414920)
chr7 (242-302)||(39981431-39981492)
chr7 (243-287)||(16755987-16756031)
[»] chr8 (54 HSPs)
chr8 (133-367)||(45279685-45279919)
chr8 (129-367)||(41629709-41629947)
chr8 (154-363)||(42099987-42100196)
chr8 (129-367)||(32797139-32797380)
chr8 (129-367)||(32693831-32694069)
chr8 (154-367)||(13116356-13116569)
chr8 (129-337)||(30786677-30786887)
chr8 (129-337)||(6397784-6397992)
chr8 (120-302)||(42872131-42872313)
chr8 (129-323)||(8571536-8571732)
chr8 (129-302)||(32798472-32798647)
chr8 (129-302)||(32695214-32695390)
chr8 (151-337)||(22551030-22551216)
chr8 (129-238)||(8570119-8570228)
chr8 (129-337)||(42870814-42871025)
chr8 (129-343)||(44076261-44076478)
chr8 (129-238)||(26696533-26696642)
chr8 (154-302)||(42877645-42877793)
chr8 (129-256)||(4810470-4810597)
chr8 (135-257)||(28418813-28418936)
chr8 (135-269)||(28420148-28420283)
chr8 (151-328)||(30787516-30787693)
chr8 (154-274)||(17338067-17338187)
chr8 (120-256)||(6398485-6398622)
chr8 (154-302)||(42098589-42098739)
chr8 (150-238)||(211617-211705)
chr8 (150-238)||(240551-240639)
chr8 (150-238)||(725240-725328)
chr8 (150-238)||(793906-793994)
chr8 (141-302)||(38696321-38696483)
chr8 (140-275)||(17702241-17702379)
chr8 (154-263)||(17339530-17339639)
chr8 (129-238)||(41630130-41630239)
chr8 (129-271)||(212684-212827)
chr8 (129-271)||(239427-239570)
chr8 (129-271)||(726307-726450)
chr8 (129-271)||(792782-792925)
chr8 (129-271)||(798808-798951)
chr8 (129-224)||(13197961-13198056)
chr8 (164-278)||(26697798-26697912)
chr8 (148-278)||(41742087-41742217)
chr8 (129-255)||(45281178-45281303)
chr8 (238-302)||(10669386-10669450)
chr8 (238-302)||(24192604-24192668)
chr8 (154-238)||(13117639-13117723)
chr8 (141-272)||(41743586-41743718)
chr8 (149-256)||(45437469-45437577)
chr8 (244-302)||(17455164-17455222)
chr8 (168-238)||(29103527-29103597)
chr8 (129-215)||(34504669-34504755)
chr8 (241-302)||(42362691-42362752)
chr8 (159-239)||(29104370-29104450)
chr8 (169-237)||(37400839-37400907)
chr8 (141-177)||(42878883-42878919)
[»] chr2 (38 HSPs)
chr2 (129-367)||(32470452-32470690)
chr2 (129-367)||(17460571-17460799)
chr2 (199-367)||(6028787-6028956)
chr2 (129-306)||(11315934-11316111)
chr2 (129-300)||(43033083-43033254)
chr2 (154-367)||(1083014-1083227)
chr2 (129-276)||(17459254-17459404)
chr2 (129-302)||(43034411-43034586)
chr2 (129-276)||(28561369-28561518)
chr2 (129-302)||(11317308-11317483)
chr2 (129-337)||(28562716-28562924)
chr2 (151-238)||(7437767-7437854)
chr2 (129-256)||(11547660-11547787)
chr2 (141-302)||(18616945-18617109)
chr2 (141-302)||(29219398-29219562)
chr2 (141-302)||(29332697-29332861)
chr2 (154-367)||(18615542-18615746)
chr2 (141-323)||(34512827-34513008)
chr2 (141-323)||(34463981-34464164)
chr2 (129-232)||(36010578-36010681)
chr2 (124-239)||(36011647-36011761)
chr2 (141-278)||(21664816-21664953)
chr2 (154-367)||(29220762-29220966)
chr2 (154-367)||(29334061-29334265)
chr2 (130-278)||(7436469-7436616)
chr2 (129-256)||(6030458-6030585)
chr2 (214-364)||(6032193-6032344)
chr2 (141-270)||(35903521-35903651)
chr2 (129-238)||(42641867-42641975)
chr2 (151-278)||(2277434-2277562)
chr2 (129-238)||(32469149-32469259)
chr2 (154-239)||(34468984-34469069)
chr2 (129-177)||(6028746-6028794)
chr2 (151-278)||(34147159-34147287)
chr2 (150-275)||(12359647-12359773)
chr2 (154-238)||(1085394-1085476)
chr2 (243-302)||(16295158-16295217)
chr2 (251-323)||(34467630-34467702)
[»] chr5 (33 HSPs)
chr5 (129-337)||(325092-325300)
chr5 (129-367)||(39605345-39605584)
chr5 (129-367)||(30857801-30858030)
chr5 (154-367)||(30912039-30912252)
chr5 (129-302)||(39603854-39604030)
chr5 (129-300)||(22047733-22047907)
chr5 (151-302)||(27705256-27705409)
chr5 (129-302)||(30859111-30859287)
chr5 (129-269)||(22049111-22049251)
chr5 (141-321)||(22308721-22308902)
chr5 (141-302)||(8521268-8521429)
chr5 (141-294)||(1010314-1010467)
chr5 (154-302)||(30910767-30910918)
chr5 (129-367)||(11263576-11263811)
chr5 (154-337)||(33173865-33174050)
chr5 (141-256)||(8523734-8523849)
chr5 (151-278)||(32757848-32757976)
chr5 (129-191)||(11262257-11262319)
chr5 (129-187)||(41798004-41798062)
chr5 (129-238)||(34894150-34894259)
chr5 (129-256)||(15548241-15548365)
chr5 (135-238)||(24503191-24503294)
chr5 (129-232)||(34898963-34899066)
chr5 (240-302)||(1102731-1102793)
chr5 (129-235)||(15941275-15941380)
chr5 (242-306)||(324153-324218)
chr5 (141-238)||(22307521-22307618)
chr5 (245-325)||(35081355-35081435)
chr5 (141-212)||(26047826-26047897)
chr5 (149-302)||(1009205-1009360)
chr5 (244-278)||(9220425-9220459)
chr5 (141-191)||(20538066-20538116)
chr5 (164-238)||(24509042-24509116)
[»] scaffold0077 (2 HSPs)
scaffold0077 (132-367)||(52596-52831)
scaffold0077 (129-302)||(54124-54300)
[»] scaffold0034 (2 HSPs)
scaffold0034 (129-367)||(109622-109860)
scaffold0034 (129-302)||(108514-108689)
[»] chr1 (49 HSPs)
chr1 (141-367)||(16963847-16964073)
chr1 (120-295)||(15072738-15072914)
chr1 (183-337)||(46110337-46110491)
chr1 (129-303)||(23091352-23091528)
chr1 (151-328)||(27814315-27814493)
chr1 (154-367)||(15233919-15234131)
chr1 (141-278)||(24499621-24499758)
chr1 (154-363)||(49802777-49802985)
chr1 (129-300)||(14470857-14471029)
chr1 (129-255)||(45584998-45585124)
chr1 (129-238)||(15071343-15071452)
chr1 (129-337)||(50444605-50444813)
chr1 (129-278)||(52628839-52628988)
chr1 (129-328)||(14477706-14477906)
chr1 (130-278)||(44276124-44276272)
chr1 (129-253)||(46111479-46111603)
chr1 (129-306)||(16123288-16123466)
chr1 (149-234)||(44278359-44278444)
chr1 (150-315)||(35943375-35943541)
chr1 (129-337)||(41873877-41874086)
chr1 (141-341)||(15746669-15746869)
chr1 (129-328)||(41872577-41872777)
chr1 (151-256)||(50442647-50442753)
chr1 (141-276)||(51042310-51042445)
chr1 (129-232)||(34351968-34352071)
chr1 (129-237)||(52627516-52627625)
chr1 (140-287)||(46467158-46467306)
chr1 (154-302)||(15232778-15232928)
chr1 (144-302)||(48096973-48097131)
chr1 (162-328)||(30535585-30535751)
chr1 (141-275)||(46318585-46318720)
chr1 (129-177)||(35942238-35942286)
chr1 (164-264)||(49801653-49801752)
chr1 (129-191)||(33369248-33369310)
chr1 (238-295)||(3617445-3617502)
chr1 (245-302)||(9226156-9226213)
chr1 (141-285)||(18821697-18821842)
chr1 (131-191)||(836246-836306)
chr1 (132-191)||(835249-835308)
chr1 (243-306)||(16757461-16757524)
chr1 (141-224)||(42244644-42244727)
chr1 (156-278)||(10376574-10376695)
chr1 (245-335)||(10722284-10722374)
chr1 (289-331)||(22766735-22766777)
chr1 (244-302)||(48527651-48527709)
chr1 (246-275)||(836176-836205)
chr1 (141-269)||(15743289-15743418)
chr1 (214-278)||(44999427-44999492)
chr1 (245-337)||(12665909-12666000)
[»] chr6 (25 HSPs)
chr6 (120-297)||(7310268-7310445)
chr6 (154-367)||(23397231-23397444)
chr6 (154-367)||(29380217-29380430)
chr6 (154-364)||(17839019-17839229)
chr6 (129-238)||(6452517-6452626)
chr6 (141-302)||(12669736-12669898)
chr6 (154-306)||(5186594-5186745)
chr6 (129-243)||(6452285-6452399)
chr6 (135-269)||(232183-232316)
chr6 (127-239)||(27080923-27081035)
chr6 (154-285)||(32506984-32507116)
chr6 (129-235)||(34024073-34024178)
chr6 (154-263)||(6702852-6702960)
chr6 (129-300)||(7311667-7311839)
chr6 (129-224)||(34023887-34023982)
chr6 (154-264)||(18346731-18346840)
chr6 (154-302)||(23392240-23392390)
chr6 (135-269)||(233543-233673)
chr6 (129-239)||(27967054-27967164)
chr6 (154-302)||(5187562-5187712)
chr6 (154-238)||(2687930-2688014)
chr6 (154-274)||(6701406-6701526)
chr6 (154-238)||(2687256-2687340)
chr6 (245-302)||(11967334-11967391)
chr6 (129-237)||(15730036-15730145)
[»] scaffold0031 (2 HSPs)
scaffold0031 (129-302)||(123970-124143)
scaffold0031 (120-315)||(125159-125357)
[»] scaffold0019 (2 HSPs)
scaffold0019 (141-337)||(63037-63234)
scaffold0019 (141-240)||(61864-61963)
[»] scaffold2071 (1 HSPs)
scaffold2071 (141-337)||(587-784)
[»] scaffold1152 (1 HSPs)
scaffold1152 (164-363)||(2365-2556)
[»] scaffold0078 (1 HSPs)
scaffold0078 (129-238)||(18813-18922)
[»] scaffold0011 (1 HSPs)
scaffold0011 (141-302)||(127446-127608)
[»] scaffold0118 (2 HSPs)
scaffold0118 (151-302)||(43514-43668)
scaffold0118 (179-227)||(42458-42506)
[»] scaffold0013 (1 HSPs)
scaffold0013 (141-302)||(32585-32745)
[»] scaffold0201 (1 HSPs)
scaffold0201 (164-337)||(21163-21337)
[»] scaffold1251 (1 HSPs)
scaffold1251 (151-278)||(1050-1178)
[»] scaffold0472 (1 HSPs)
scaffold0472 (214-256)||(733-775)


Alignment Details
Target: chr4 (Bit Score: 280; Significance: 1e-156; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 17 - 363
Target Start/End: Original strand, 52963451 - 52963804
Alignment:
Q  17 atacaactctaactcattgcatagaaaagcacatcaactacttttatgtaatcaattgttatatttatgtgtgttta-------tagaacctaatttgct 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       || |||||||||||||    
T  52963451 atacaactctaactcattgcatagaaaagcacatcaactacttttatgtaatcaattgttatatttttgtgtgtttactgtttataaaacctaatttgct 52963550  T
Q  110 actataagagaaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccct 209  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52963551 actataagagcaaataagtttatttgatcaattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccct 52963650  T
Q  210 caagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcat 309  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52963651 caagtttttctccgtttgtcaaataaatctcgactgttaactttaactccaaatgtctatggtggaccagccttaaaagtggtccatcatagaccttcat 52963750  T
Q  310 aaatttgttaattttaacctttagatctatttatgataaaagggaccgttagat 363  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  52963751 aaatttgttagttttaacctttagatctatttatgataaaagggacggttagat 52963804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 40792752 - 40792988
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||  | ||||||||||| |||||| ||||||||||||||||| ||||||||||||| | ||| |||||||||||||  |||||||||||||||    
T  40792752 ttatttgatttaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgc 40792851  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  ||  |||||||||||||| |||||||||| |||||||| |||||||| ||||| ||  ||||||||  ||| ||| ||||||||| ||    
T  40792852 caaataaatcccga--gttaactttaactttaaatgtctatagtggaccaaccttaaaagtggtctatggtagaccttattaattttcttaattttatcc 40792949  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||||||||||||||||||||    
T  40792950 gttcgatctatttatcataaaagggaccgttagatcttc 40792988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 129 - 270
Target Start/End: Original strand, 2310924 - 2311065
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||| ||||| ||||    
T  2310924 ttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgattgc 2311023  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatg 270  Q
    |||||||||| | || |||||||||||||| |||||||||||    
T  2311024 caaataaatcctaacagttaactttaactttaaatgtctatg 2311065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 52241245 - 52241037
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| |||||||||||| |  ||||||||||||| ||||||||||| | |||||  |||| |||||||||||||||||||   ||| |||||||||    
T  52241245 taatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaattccgaccgttaacttt 52241146  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||| ||||| |||||||| ||||| |||||||| |||||||| |||||||||  ||  ||||||||||||| || || ||||||||||| |||||||||    
T  52241145 aactccaaatatctatggt-gaccatccttaaaagtggtccatgatagaccttattagttttgttaattttatccattcgatctatttatcataaaaggg 52241047  T
Q  354 accgttagat 363  Q
    || |||||||    
T  52241046 acagttagat 52241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 129 - 272
Target Start/End: Original strand, 390218 - 390361
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||  | || ||||||||||    
T  390218 ttatttgattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgc 390317  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggt 272  Q
    |||||||||| |||||||||| |||||| |||||||||| ||||    
T  390318 caaataaatcctgactgttaagtttaacctcaaatgtctgtggt 390361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 129 - 275
Target Start/End: Original strand, 42871096 - 42871242
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||| || | ||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||  |||| ||||||||||    
T  42871096 ttatttgatccaatggtcccctgattaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgc 42871195  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtgga 275  Q
    |||||||||| |||||||||| ||||| | |||||||||| ||||||    
T  42871196 caaataaatcctgactgttaagtttaattccaaatgtctacggtgga 42871242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 129 - 306
Target Start/End: Complemental strand, 393753 - 393575
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||  |||||   |||||||||||| |||||||||||||| |||||||||||||  |||  |||||||||||||  |||||||||||||||    
T  393753 ttatttgatccaacggtccctcaaataatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgc 393654  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    ||||||||| |  ||||||||||||||| |  |||||| ||| |||||||| |||||||| ||||||||| ||||||||    
T  393653 caaataaatcccggactgttaactttaattctaaatgtttatagtggaccaaccttaaaagtggtccatcgtagacctt 393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 2312597 - 2312421
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||||||||  || |||||||||||||| |||||| ||| ||||||||||||| |||||||||  ||||||||  |||| ||||||||||    
T  2312597 ttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgc 2312498  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| |||| ||||| ||||||  |||   |||||||||||||||||  ||||||| ||||||| ||||||    
T  2312497 caaataaatcatgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccataga 2312421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 129 - 306
Target Start/End: Original strand, 6348156 - 6348333
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||  |||| ||| |||||     
T  6348156 ttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtttgt 6348255  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    |||||||||  |||  ||||| |||||| ||||||||||||||||||||| |||||| | ||||||| | ||||||||    
T  6348256 caaataaattctgatggttaagtttaacctcaaatgtctatggtggaccaaccttaagagtggtccaccgtagacctt 6348333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 37882857 - 37882981
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc--ttgactgtta 248  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||  |||| ||||||||||||||||||||  ||||||||||    
T  37882857 aaataatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatcatttgactgtta 37882956  T
Q  249 actttaacttcaaatgtctatggtg 273  Q
    |||||||  |||||| |||||||||    
T  37882957 actttaatctcaaatatctatggtg 37882981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 328
Target Start/End: Original strand, 1829754 - 1829954
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||  |||||   ||||||||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||||  |||| || ||||||     
T  1829754 ttatttgatccaacggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgt 1829853  T
Q  229 caaataaatcttgactgttaac-tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    |||||||||   |||||||||| |||||||  |||||||||| |||||||| | |||||| ||||||||| ||||||||  ||| ||| ||||| |||||    
T  1829854 caaataaattccgactgttaacttttaactctaaatgtctatcgtggaccaactttaaaagtggtccatcgtagaccttattaattttattaatcttaac 1829953  T
Q  328 c 328  Q
    |    
T  1829954 c 1829954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 7708869 - 7708665
Alignment:
Q  163 gttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaa 262  Q
    ||||||||||||||   ||||||||||||     |||||| ||||||||  |||||||| ||||||||||||||||   | ||||||||||||||  |||    
T  7708869 gttttcattttggttctacaattaataaaagtggcgttttagtccctcacctttttctctgtttgccaaataaatcccaagtgttaactttaactctaaa 7708770  T
Q  263 tgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaagggaccgttaga 362  Q
    | |||||||||||||| |||||||| |||| |||||||||||||  ||| |||||||||| ||||| |  |||||||||||  ||||| ||||| |||||    
T  7708769 tatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaattctaaccatccgatctatttatcttaaaatggaccattaga 7708670  T
Q  363 tcttc 367  Q
    |||||    
T  7708669 tcttc 7708665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 1587183 - 1587392
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||  |||||   ||||||||| || |||||||||| ||||||||||||||||| ||||| |||||||||||||  |||| ||||||||||    
T  1587183 ttatttgatccaacggtccctcaaataattttaaattttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgc 1587282  T
Q  229 caaataaatcttgactgttaac-tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    ||||||||||  ||  |||||| |||||||  |||||||||| || ||||| | |||||| || |||||| || |||||  ||| ||||||||| |||||    
T  1587283 caaataaatcccgatggttaacttttaactctaaatgtctatagtagaccaactttaaaagtgttccatcgtataccttattaattttgttaatcttaac 1587382  T
Q  328 ctttagatct 337  Q
    | || |||||    
T  1587383 cgtttgatct 1587392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 23204043 - 23203830
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||| ||||||||     ||||||||||| |||  |||||||||||||||||| ||||||   | | ||||||||    
T  23204043 taatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctccgtttgccaattaaatcccaagtattaacttt 23203944  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||  |||| ||||||||||| || |||||||| ||||| ||  ||||||||  ||| |||||||||||||||| || ||| ||||||| |||||| ||    
T  23203943 aactctaaatatctatggtggatcaaccttaaaagtggtctattgtagaccttattaattttgttaattttaaccattcgatatatttatcataaaatgg 23203844  T
Q  354 accgttagatcttc 367  Q
    ||| ||||||||||    
T  23203843 accattagatcttc 23203830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 24426331 - 24426448
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttc 219  Q
    |||||| | |||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||| |    
T  24426331 aaaataggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcc 24426430  T
Q  220 tccgtttgccaaataaat 237  Q
    ||||||||||||| ||||    
T  24426431 tccgtttgccaaaaaaat 24426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 4128994 - 4129117
Alignment:
Q  129 ttatttgatccattgg-tcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttg 227  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||  |||| ||||||||||| |  ||||||||||||||    
T  4128994 ttatttgatccaatggttcctc-aaataatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttg 4129092  T
Q  228 ccaaataaatcttgactgttaactt 252  Q
    |||||||||||  ||| ||||||||    
T  4129093 ccaaataaatcccgaccgttaactt 4129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 328
Target Start/End: Complemental strand, 42810318 - 42810118
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | ||||  ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||  ||||||||  |||| ||||||||||    
T  42810318 ttatttgatccaatagtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgc 42810219  T
Q  229 caaataaatcttgactgttaactttaa-cttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    |||||||||| |   |||||| ||||| |  || |||||||||||| ||||  ||||| | | ||||| ||||||||||  ||||||| ||||||| |||    
T  42810218 caaataaatccttggtgttaagtttaacccccagatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaatttaaac 42810119  T
Q  328 c 328  Q
    |    
T  42810118 c 42810118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 278
Target Start/End: Original strand, 1188844 - 1188994
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | ||||   ||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||  |||| ||||||||||    
T  1188844 ttatttgatccaatagtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgc 1188943  T
Q  229 caaataaatcttgactgttaac-tttaacttcaaatgtctatggtggacca 278  Q
    ||||||||||  ||  |||||| ||||||   |||||||||||||| ||||    
T  1188944 caaataaatcccgaacgttaacttttaaccctaaatgtctatggtgaacca 1188994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 11968534 - 11968687
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||  |||| |||||||||  ||||||||   | |||| |||    
T  11968534 aaataatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtttgtaaaataaattccggctgtcaac 11968633  T
Q  251 tttaacttcaa--atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||   |  ||||||||| ||||||| |||||| | ||||||||||||||    
T  11968634 tttaactcagattatgtctatgatggaccaaccttaagagtggtccatcataga 11968687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 342
Target Start/End: Complemental strand, 53435843 - 53435654
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaactt 252  Q
    |||||||||||||||||||||||| || || ||||||| |  | ||||||| |||||||||||  ||||||| | ||||||||| |||||| ||||| ||    
T  53435843 taatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatccttgacggttaagtt 53435744  T
Q  253 taacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt-aattttaacctttagatctattta 342  Q
    |||||| ||||||||||||| ||||| |||||| | ||||||| | |||| |||||| ||||| || |||||||||| || ||||| ||||    
T  53435743 taactttaaatgtctatggtagaccaaccttaagagtggtccaccgtaga-cttcattaattttttaaattttaaccgtttgatcttttta 53435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 341
Target Start/End: Original strand, 1794412 - 1794627
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   |||||||||||||||||||||||| ||||||||||||||||   ||| ||||| |||||||  |||| ||| |||||     
T  1794412 ttatttgattcaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtttgt 1794511  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaatttta 325  Q
    |||||||||| | || ||||| |||||   |||   |||| |||||||||||| |||||| | ||||||| ||||||||||  ||||||| ||||||| |    
T  1794512 caaataaatcctaacggttaagtttaatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaa 1794611  T
Q  326 acctttagatctattt 341  Q
    ||| || |||| ||||    
T  1794612 accgtttgatcaattt 1794627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 141 - 337
Target Start/End: Complemental strand, 13533363 - 13533168
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||||||| ||||||||||||||||| || ||  || || ||| ||| |  | |||||||||||||| |||| |||||||  | ||||||||||      
T  13533363 ttggtcctctaattaatttcaagttttcatcttagttccataactaaaaaaactcatgttttggtccctcacgtttgtctccgtcggtcaaataaatcca 13533264  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
    ||||||||| |||||||||||||||||||||||||||| | ||| |  | ||||| |||||||||| || ||||| | |||||||||| || |||||    
T  13533263 gactgttaaatttaacttcaaatgtctatggtggaccaacattatagatagtccaccatagacctt-attaatttttcaattttaaccatttgatct 13533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 27851047 - 27850878
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||| |||| ||||||        
T  27851047 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt---- 27850952  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
       |||||||   || ||||| |||||| ||||   ||||||||||||||||| |||||||| ||||||| ||||||    
T  27850951 ---ataaatcccaacagttaagtttaacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccataga 27850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 151 - 278
Target Start/End: Complemental strand, 44503771 - 44503644
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||  |||| ||| ||||||||||||||||  ||| ||||||    
T  44503771 aaataatttcaagtttttattttggtctcacaattaataaa-cgtacattttggtccctcactttttcctctgtttgccaaataaatcccgaccgttaac 44503673  T
Q  251 -tttaacttcaaatgtctatggtggacca 278  Q
     ||||||   |||||||||||||| ||||    
T  44503672 ttttaaccctaaatgtctatggtgaacca 44503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 302
Target Start/End: Original strand, 52239878 - 52240053
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | ||||||   |||||||||||| |||| |||||| || ||||||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  52239878 ttatttgatctaatggtccctcaaataatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtttgc 52239977  T
Q  229 caaataaatcttgactgttaactttaacttcaa--atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||    |  ||||||||||||   ||  ||||||||||||||||| |||||| | ||||||| ||||||    
T  52239978 caaataaattccaagggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 52240053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 4871479 - 4871352
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||   |||||||||||| |||| ||||  ||||| || |||||||||||||||     
T  4871479 ttatttgatccattggtccccaaaataatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgt 4871380  T
Q  229 caaataaat-cttgactgttaactttaa 255  Q
    ||||||||| | ||| ||||||||||||    
T  4871379 caaataaatccctgaatgttaactttaa 4871352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 129 - 278
Target Start/End: Complemental strand, 11438683 - 11438533
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||| |||||| |||| ||| ||||||| ||||||| |||||||||||| |||||||||| |   |||||||||||||||  |||| |||| |||||    
T  11438683 ttatttgttccattagtcccctatataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgc 11438584  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatggtggacca 278  Q
     |||||||||| ||||| |||| ||||||  |||||||||| |||||||||    
T  11438583 taaataaatctctgacttttaagtttaaccccaaatgtctacggtggacca 11438533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 44501519 - 44501629
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||| ||||||||||   ||||||||||||||||||||| ||||| || |||||||||| |||||||||  ||||||||  |||||||| ||||||    
T  44501519 ttatttgaaccattggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtttgc 44501618  T
Q  229 caaataaatct 239  Q
    |||||||||||    
T  44501619 caaataaatct 44501629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 6349667 - 6349490
Alignment:
Q  130 tatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgcc 229  Q
    |||||||| || ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||  ||||  ||||||| ||    
T  6349667 tatttgattcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttacc 6349568  T
Q  230 aaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcatagacc 304  Q
    ||||| |||  ||  ||||| ||||||  |||   |||| ||||||||| || |||||| | ||||||| ||||||||    
T  6349567 aaatagatcccgaacgttaagtttaaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccatagacc 6349490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 13165522 - 13165671
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttgactgttaactt 252  Q
    |||||||| ||||||||||||||| |  ||||||||||     |||||| |||| |||  |||| ||||||||| |||||||||| ||||||||||| ||    
T  13165522 taatttcatgttttcattttggtccct-aattaataaaaatggcgttttcgtccttcatcttttcctccgtttgtcaaataaatccttgactgttaagtt 13165620  T
Q  253 taacttcaaatgtctatggtggaccagccttaaaattggtccatcatagac 303  Q
    ||||||||||| |||||||||||||| |||||| | ||||||| |||||||    
T  13165621 taacttcaaatttctatggtggaccaaccttaagagtggtccaccatagac 13165671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 54485645 - 54485551
Alignment:
Q  144 gtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||| |||||||||||||||||||||||||| || || |||||||||| | | ||||||| |||||||||||||  |||||||||||||||||||    
T  54485645 gtcccctaaataatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatc 54485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 1190307 - 1190198
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||| ||||||||||   ||||||||| ||||||||||||||||| || |||||||||| |||||||||  || |||||  |||||||| ||||||    
T  1190307 ttatttgaaccattggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgc 1190208  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  1190207 caaataaatc 1190198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 293
Target Start/End: Complemental strand, 1588204 - 1588037
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||  |||||||   ||||||||| ||||||||||||| ||| |||||||||||||  ||||||||   |||||||  |||| |||||||| |    
T  1588204 ttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtttac 1588105  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtc 293  Q
    |||||||||  |||||||||| ||||||  |||   ||||||||||| ||||| ||||||| ||||||    
T  1588104 caaataaattatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaagttggtc 1588037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 2311080 - 2311192
Alignment:
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||| |||||||||||||||||||  ||||||| ||||| ||| ||||||||  |||  ||||||||||||||| || ||||||||||| |||||| ||    
T  2311080 aactttaaatgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaatattgttaattttaaccattcgatctatttatcataaaa-gg 2311178  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  2311179 accgttagatcttc 2311192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 10168873 - 10168689
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaactt 252  Q
    |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||| | |||| ||||||||    
T  10168873 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatccatgacagttaactt 10168774  T
Q  253 taa-cttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatc 336  Q
    ||| |  |||||||||||||||||||| | ||| |  ||||||| | || |||||  ||| ||  ||||||||| ||||||||||    
T  10168773 taacccccaaatgtctatggtggaccaacattatagatggtccaccgtacaccttattaatttatttaattttagcctttagatc 10168689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 27847701 - 27847824
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    ||||||||||||||||| ||||||||| |||||||||||||  |||  ||| ||||||| || ||||  |||||||||||||||||||  ||| |||||     
T  27847701 aaataatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttgccaaataaatccagacggttaag 27847800  T
Q  251 tttaacttcaaatgtctatggtgg 274  Q
    ||||||  ||||||| ||||||||    
T  27847801 tttaaccccaaatgtatatggtgg 27847824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 15450190 - 15450015
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| |||||||||  |||||||||||| ||||||||| || || |  | |||||||| |||||||||  ||| || |  |||| ||||||||||    
T  15450190 ttatttgattcattggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtttgc 15450091  T
Q  229 caaataaatcttgactgttaactttaacttcaaa---tgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||| || ||||| ||||||| ||||   ||||||| |||||||| |||||| | ||||||| ||||||    
T  15450090 caaataaatctt-acggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccataga 15450015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 42872414 - 42872308
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || |||||| |||| ||||| | | |||||||||||||| || ||||||||||  ||||||||||||||||||  |||| ||||||||||    
T  42872414 ttatttgattcaatggtcccctaattaattaccatttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgc 42872315  T
Q  229 caaataa 235  Q
    |||||||    
T  42872314 caaataa 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 49344125 - 49344015
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccc-tcaagtttttctccgtttg 227  Q
    |||||||||||| |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| |||  ||||  ||||| |||  |||| |||||||||    
T  49344125 ttatttgatccaatggtcctctaaataattttaagcttttattttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgtttg 49344026  T
Q  228 ccaaataaatc 238  Q
    |||||||||||    
T  49344025 ccaaataaatc 49344015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 1831378 - 1831269
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   || |||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||  |||| |||| |||      
T  1831378 ttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccattttt 1831279  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  1831278 caaataaatc 1831269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 31968507 - 31968398
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| ||||||  ||||| |||| |||||| || ||||||||||||||  |||||||||||| ||||||||||||||| |||  |||| ||| ||||||    
T  31968507 ttattagatccaacggtcccctaattaattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtttgc 31968408  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  31968407 caaataaatc 31968398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 53432088 - 53432213
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaactt 252  Q
    |||||||||||||||||||||||| || || ||||||| | || |||||||||||||||||||  || |||| | ||||||||| | |||| ||||| ||    
T  53432088 taatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatccctgacggttaagtt 53432187  T
Q  253 taacttcaaatgtctatggtggacca 278  Q
    ||||  ||||||||||||||| ||||    
T  53432188 taaccccaaatgtctatggtgaacca 53432213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 53204383 - 53204471
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||| | |||||||||||| |||||||||||||||| |   |||||| || |||||| |||||||||||||||||||||||||    
T  53204383 taaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatc 53204471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 55764450 - 55764342
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| ||||||||||| | |||||||||||||||||||||||| || ||| |||||||||| | | |||||||| | ||||||||||  |  ||||||    
T  55764450 ttatttcatccattggtcttttaaataatttcaagttttcatttttgtatcataattaataaaacttccgttttggccgctcaagttttcttttgtttgc 55764351  T
Q  229 caaataaat 237  Q
    |||||||||    
T  55764350 caaataaat 55764342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 31965836 - 31965963
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | || ||| |||| |||||||||||||| ||| |||||  |||||||| |||  |||| |||||||||||||  |||| ||||||||||    
T  31965836 ttatttgatctaatgatcccctaattaatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttgc 31965935  T
Q  229 caaataaatcttgactgttaactttaac 256  Q
    |||||||||| ||  |||||| ||||||    
T  31965936 caaataaatcctgggtgttaagtttaac 31965963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 275
Target Start/End: Complemental strand, 53205598 - 53205451
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| |||| |||| | |||||||||||  |||||||||| ||| ||||||||| |||     |||||| ||||||||  |||| ||||||||||    
T  53205598 ttatttgattcattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgc 53205499  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtgga 275  Q
    ||||||||| | ||  ||||||||||||  ||||||||||||||||||    
T  53205498 caaataaatccatgggtgttaactttaatctcaaatgtctatggtgga 53205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 33232777 - 33232664
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaat 263  Q
    |||| ||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||||  | |||||||||||| ||||||    
T  33232777 tttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcttttccgttaactttaac-tcaaat 33232679  T
Q  264 gtctatggtggacca 278  Q
    |||||| ||||||||    
T  33232678 gtctattgtggacca 33232664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 7707614 - 7707765
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||    ||||||| |||| |||  |||| ||| |||||||||||||||| |||| |||| ||||    
T  7707614 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatcctgacggttagcttt 7707713  T
Q  254 aacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  |||   |||||| |||| ||||| |||||| | ||||||| ||||||    
T  7707714 aacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccataga 7707765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 129 - 278
Target Start/End: Complemental strand, 37884392 - 37884243
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   ||||||||| || |||||||||| ||| || ||||||||||  |||| ||||||||| | |  |||| ||||||||||    
T  37884392 ttatttgattcaatggtccctcaaataattttaaattttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctccgtttgc 37884293  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    ||||||||||  ||||||||| ||||||  ||||| | ||||||| ||||    
T  37884292 caaataaatccagactgttaagtttaaccccaaatatatatggtgaacca 37884243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 55828894 - 55828786
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| ||||||||||| | |||||||||||||||||| ||||| || ||| |||||||||| | | |||||||| | ||||||||||  |  ||||||    
T  55828894 ttatttcatccattggtcttttaaataatttcaagtttttatttttgtatcataattaataaaacttccgttttggccactcaagttttcttttgtttgc 55828795  T
Q  229 caaataaat 237  Q
    |||||||||    
T  55828794 caaataaat 55828786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 13166793 - 13166734
Alignment:
Q  220 tccgtttgccaaataaatc-ttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  13166793 tccgtttgccaaataaatccttgactgttaagtttaacttcaaatgtctatgatggacca 13166734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 54484336 - 54484455
Alignment:
Q  152 aataatttc-aagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct-tgactgttaa 249  Q
    ||||||||| || |||| ||||||||  || |||||||||| ||| ||||||||||||| || |||| ||| |||||||||||||||||   ||||||||    
T  54484336 aataatttccaattttttattttggtaccataattaataaaacgttcgttttggtccctaaaattttcctctgtttgccaaataaatctcaaactgttaa 54484435  T
Q  250 ctttaacttcaaatgtctat 269  Q
    ||||||||  ||||||||||    
T  54484436 ctttaactctaaatgtctat 54484455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 40723264 - 40723402
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaat 263  Q
    |||||||||||||| || || ||||||| |  | |||||||||||| | |||| |||||||  | ||||||||||   |||||||| |||||| ||||||    
T  40723264 ttttcattttggtcccataactaataaaactcatgttttggtcccttaggtttatctccgtcggtcaaataaatccatactgttaagtttaacctcaaat 40723363  T
Q  264 gtctatggtggaccagccttaaaattggtccatcataga 302  Q
    || |||||||||||| |||||| | ||||| | ||||||    
T  40723364 gtatatggtggaccaaccttaagagtggtctaccataga 40723402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 5591498 - 5591421
Alignment:
Q  196 acgttttggtccctcaagtttttctccgtttgccaaataaatctt-gactgttaactttaacttcaaatgtctatggt 272  Q
    ||||||| ||||||||   ||||||| |||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  5591498 acgttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggt 5591421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 48126872 - 48126949
Alignment:
Q  196 acgttttggtccctcaagtttttctccgtttgccaaataaatctt-gactgttaactttaacttcaaatgtctatggt 272  Q
    ||||||| ||||||||   ||||||| |||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  48126872 acgttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggt 48126949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 50548310 - 50548190
Alignment:
Q  157 tttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaac 256  Q
    ||||| ||||||||||||||| ||||||||||||     ||||||| ||||||||  |||| ||| |||||||||||||||| |  | || |||||||||    
T  50548310 tttcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatcctttccgtcaactttaac 50548211  T
Q  257 ttcaaatgtctatggtggacca 278  Q
     |||||||||||| ||||||||    
T  50548210 -tcaaatgtctattgtggacca 50548190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 54866720 - 54866612
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||||||||||||      ||||| |||||| | ||||| |||||||||||||||||||| |||||||||| |||    
T  54866720 taatttcatattttcattttggtc-cacaattaataaaaatggtgttttagtcccttacgttttcctccgtttgccaaataaatcatgactgttaagttt 54866622  T
Q  254 aacttcaaat 263  Q
    |||| |||||    
T  54866621 aactccaaat 54866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 4714116 - 4714196
Alignment:
Q  224 tttgccaaataaatctt-gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagac 303  Q
    ||||||||||||||| | |||| |||| ||||||||||||||||||||||||| || |||||| | ||||||| |||||||    
T  4714116 tttgccaaataaatcatcgactattaagtttaacttcaaatgtctatggtggatcaaccttaagagtggtccaccatagac 4714196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 303
Target Start/End: Original strand, 22069303 - 22069411
Alignment:
Q  196 acgttttggtccctcaagtttttctccgtttgccaaataaatct-tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtcc 294  Q
    |||||||||||||| | |||| | ||||||   ||||||||||  ||  ||||||||||||||||||||||||||||||||| | |||||||| |||| |    
T  22069303 acgttttggtcccttatgtttgtttccgttattcaaataaatcaatggttgttaactttaacttcaaatgtctatggtggacgaaccttaaaagtggttc 22069402  T
Q  295 atcatagac 303  Q
    | |||||||    
T  22069403 accatagac 22069411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 295
Target Start/End: Original strand, 49342643 - 49342787
Alignment:
Q  152 aataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaa-tcttgactgttaac 250  Q
    |||||||| |||||||||||||| || |||||||||||||  ||||||||  ||||||||  |||| |||| ||||  ||||||| | ||   ||||||     
T  49342643 aataattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaattattcggtgttaag 49342742  T
Q  251 tttaacttcaaatgtctatggtggaccagccttaaaattggtcca 295  Q
    ||||||  |||| |||||| |||||||| |||||||| |||||||    
T  49342743 tttaaccccaaacgtctatagtggaccaaccttaaaagtggtcca 49342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 33231415 - 33231563
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaa-tcttgactgttaactt 252  Q
    |||||||| ||||||||||| ||| |||||||||||||      ||||| ||||||||  |||||| |||||||||||||||| || |   |||||| ||    
T  33231415 taatttcatgttttcattttagtcccacaattaataaaaatggtgttttagtccctcatctttttcaccgtttgccaaataaattcatacttgttaagtt 33231514  T
Q  253 taa-cttcaaatgtctatggtggaccagccttaaaattggtccatcata 300  Q
    ||| | ||||||||||||||||||| | ||||| || ||||||| ||||    
T  33231515 taaccctcaaatgtctatggtggacaaaccttagaagtggtccaccata 33231563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 302
Target Start/End: Original strand, 44498573 - 44498636
Alignment:
Q  239 ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||| |||||||||||||| |||||||||||||||| || |||||| | ||||||| ||||||    
T  44498573 ttgacggttaactttaactttaaatgtctatggtggatcaaccttaagagtggtccaccataga 44498636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 10167451 - 10167535
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||| ||||||||||||||  |||||||||||||   | | |||| ||||||||  |||| ||||||||| ||||||||||    
T  10167451 taatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtttgtcaaataaatc 10167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 56085458 - 56085522
Alignment:
Q  238 cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||| ||||||||||||||  |||||||||||||||||| | |||||| | ||||||| ||||||    
T  56085458 cttggctgttaactttaaccccaaatgtctatggtggactaaccttaagagtggtccaccataga 56085522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 54865131 - 54865245
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaa-tcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactt 252  Q
    |||||| | ||||||||||||||| || |||||||||| | ||  ||||| ||||||||  |||| ||||||||| |||||||||| |   ||| |||||    
T  54865131 taattttatgttttcattttggtcccataattaataaaattgt--gttttagtccctcacattttcctccgtttgtcaaataaatcatttatgtcaactt 54865228  T
Q  253 taacttcaaatgtctat 269  Q
    |||  ||||||||||||    
T  54865229 taatctcaaatgtctat 54865245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 50546932 - 50547016
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||| || |||||||| ||| |||||||||||||     |||||| ||||||||  |||| | ||||||||||||||||||    
T  50546932 taatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccaccgtttgccaaataaatc 50547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 40244188 - 40244425
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  40244188 ttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgtttgc 40244287  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||| ||| ||||| ||||||||||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||||  ||| |||||||||||||||     
T  40244288 caaat-aattttgacagttaactttaacttcaagtgtctatggtggaccaaacttaaaagtggtccatcgtagaccttattaattttgttaattttaact 40244386  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||| ||||||||||||||||    
T  40244387 ctttgatctatttatcataaaatggaccgttagatcttc 40244425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 34818087 - 34818325
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||  |||| |||| |||||    
T  34818087 ttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgc 34818186  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||   |  |||||||||||||| ||||||||||||| || || |||||||| || || ||||||||||||  ||| ||||||||||||||||    
T  34818187 caaataaatcccaatagttaactttaactttaaatgtctatggttgatcaaccttaaaaatgatctatcatagaccttattaattttgttaattttaacc 34818286  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||||||||| ||||||||||    
T  34818287 gttcgatctatttatcataaaagggaccattagatcttc 34818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 38240907 - 38241144
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||||||||  | ||||||||||| |||| ||||||||| ||||||||||||| |||||||||  |||| |||  |||| ||||||||||    
T  38240907 ttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtttgc 38241006  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  | ||||||| ||||||| ||||||||||||||| ||||  ||||||| ||||||||| |||| |||  ||| ||||||||||||||||    
T  38241007 caaataaatcccggctgttaagtttaactccaaatgtctatggtgaacca-acttaaaaatggtccatcgtagagcttattaattttgttaattttaacc 38241105  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| ||||||| ||| |||||||||||    
T  38241106 attcgatctatttatcataaaagagacggttagatcttc 38241144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 27837946 - 27838158
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| ||||||||||||||    |||||| ||||||||  |||| |||||||||||||||||||| |||||||||||||     
T  27837946 taatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctgactgttaactt- 27838044  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||||||||| |||||   |||||| ||||||||| ||||||||  ||| |||||||||||||||  || ||||||||||| |||||| ||    
T  27838045 aacttcaaatgtctatggtagaccaattttaaaagtggtccatcgtagaccttattaattttgttaattttaactattcgatctatttatcataaaatgg 27838144  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  27838145 accgttagatcttc 27838158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 35372248 - 35372036
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| |||||||||||||||||||||||||||||     |||||| ||||||||  |||| ||| |||||||||||||||| | |||||||||||     
T  35372248 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttactgttaactt- 35372150  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||||||| |||||||   |||||| ||||||||| ||||||||  ||| |||||||||||||||| || ||||||||||| |||||| ||    
T  35372149 aacttcaaatgtctatgttggaccaattttaaaagtggtccatcgtagaccttattaattttgttaattttaaccattcgatctatttatcataaaatgg 35372050  T
Q  354 accgttagatcttc 367  Q
    || |||||||||||    
T  35372049 actgttagatcttc 35372036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 153 - 367
Target Start/End: Complemental strand, 40745557 - 40745343
Alignment:
Q  153 ataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactt 252  Q
    ||||||| ||||||||||||||||||||||||| ||||| | | ||||||| |||||||  |||| ||  |||||| |||||||||||||| ||||||||    
T  40745557 ataattttaagttttcattttggtctcacaattgataaaactttcgttttgatccctcagattttcctttgtttgcaaaataaatcttgaccgttaactt 40745458  T
Q  253 taacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaagg 352  Q
    ||| | ||||||| |||| || | || |||||||| |||| |||| ||||||||  ||| ||||||||||||||    | ||||||||||| ||||||||    
T  40745457 taattccaaatgtttatgatgtatcaaccttaaaagtggttcatcgtagaccttattaattttgttaattttaattactcgatctatttattataaaagg 40745358  T
Q  353 gaccgttagatcttc 367  Q
    |||||||||||||||    
T  40745357 gaccgttagatcttc 40745343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 53624476 - 53624269
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||  |||||||| ||||||    
T  53624476 ttatttgatccaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggtttgc 53624377  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  ||| ||||  ||||||  ||||||| |||||||||||| | ||| |  | ||||| |||||||||| || ||||| | ||||||||||    
T  53624376 caaataaatccagacggttaggtttaaccccaaatgtatatggtggaccaacattatagatagtccaccatagacctt-attaatttttcaattttaacc 53624278  T
Q  329 tttagatct 337  Q
    ||| |||||    
T  53624277 ttttgatct 53624269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 326
Target Start/End: Original strand, 10730920 - 10731083
Alignment:
Q  163 gttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaa 262  Q
    ||||||||||||||| || ||||||||||     | ||||||||| |||  |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10730920 gttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctccgtttgccaaataaatcccgactgttaactttaacttcaaa 10731019  T
Q  263 tgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaa 326  Q
    ||||||||||| |||| |||||||| ||||| |||||| |||||  ||| ||||||||||||||    
T  10731020 tgtctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgttaattttaa 10731083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 151 - 328
Target Start/End: Original strand, 18197170 - 18197340
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||  |||| ||||||||||||||||||||  ||| ||||||    
T  18197170 aaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatccagaccgttaac 18197269  T
Q  251 tttaacttc-aaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||| | |||  ||||||||| |||| ||||        |||||||||||||||  ||| ||||||||||||||||    
T  18197270 tttaactccaaaacatctatggtgaaccaacctt--------tccatcatagaccttattaattttgttaattttaacc 18197340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 154 - 362
Target Start/End: Complemental strand, 26887645 - 26887437
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||| ||| |||||||||||||     |  ||| ||||||||  |||| ||| |||| ||||||||||  |||| |||||||||    
T  26887645 taatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatcttttcctctgtttcccaaataaattctgacggttaacttt 26887546  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||||||||| ||||||||| |||| |||||||| ||||| ||| |||||||   ||| ||| || |||| |||| || |||||| ||||||||||||||    
T  26887545 aacttcaaatatctatggtgtaccaaccttaaaagtggtctatcgtagacctcattaattttatttatttcaaccattcgatctaattatgataaaaggg 26887446  T
Q  354 accgttaga 362  Q
    |||||||||    
T  26887445 accgttaga 26887437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 38242609 - 38242458
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||  ||||| || |||||||||||||||| | || |||||     
T  38242609 aaataatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatcctcacagttaag 38242510  T
Q  251 tttaacttcaa--atgtctatggtggaccagccttaaaattggtccatcata 300  Q
    |||||||  ||  ||||||||||||||||| |||||| | ||||||| ||||    
T  38242509 tttaactcaaatgatgtctatggtggaccaaccttaagagtggtccaccata 38242458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 142 - 323
Target Start/End: Original strand, 53420330 - 53420513
Alignment:
Q  142 tggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat--ct 239  Q
    |||||| |||| ||||||||  ||||||||||||||  |||||||||||| |||||||||||||||||||  |||||||||||||  |||||||||  ||    
T  53420330 tggtcccctaactaatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatccct 53420429  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattt 323  Q
     | || |||| ||||||  |||||||||||||||||||| | |||||| || |||| ||||||||||  |||| || |||||||    
T  53420430 agtctattaagtttaaccacaaatgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaattt 53420513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 37736196 - 37736089
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||| |||| |||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||    
T  37736196 ttatgtgattcattagtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgc 37736097  T
Q  229 caaataaa 236  Q
    ||||||||    
T  37736096 caaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 18458772 - 18458662
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| | | |||||| ||||||||  |||| ||||||||||    
T  18458772 ttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgc 18458673  T
Q  229 caaataaatct 239  Q
    |||||||||||    
T  18458672 caaataaatct 18458662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 37735307 - 37735417
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| || |||||||||| |||| ||||| ||||||||  ||||||| ||||||     
T  37735307 ttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcgtttgt 37735406  T
Q  229 caaataaatct 239  Q
    |||||||||||    
T  37735407 caaataaatct 37735417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 41263664 - 41263877
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||| ||| ||||     | ||||||||| |||  |||||||||||||| ||| ||||||   | ||||||||||    
T  41263664 taatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctccgtttgtcaattaaatcccaagtgttaacttt 41263763  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||  |||| ||||||||||| || |||||||| ||||| ||  ||||||||  ||| |||||||||||||||| || ||||||||||| |||||| ||    
T  41263764 aactctaaatatctatggtggatcaaccttaaaagtggtctattctagaccttattaattttgttaattttaaccattcgatctatttatcataaaatgg 41263863  T
Q  354 accgttagatcttc 367  Q
    ||| ||||||||||    
T  41263864 accattagatcttc 41263877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 152 - 276
Target Start/End: Complemental strand, 53194962 - 53194837
Alignment:
Q  152 aataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaac 250  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||  |||| |||  |||||||||||||| | || |||||||     
T  53194962 aataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatccatgtctgttaag 53194863  T
Q  251 tttaacttcaaatgtctatggtggac 276  Q
    |||||||  |||||||||||||||||    
T  53194862 tttaactcaaaatgtctatggtggac 53194837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 50810943 - 50810808
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||||||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||||||||||    
T  50810943 gatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaata 50810844  T
Q  235 aatct-tgactgttaactttaacttcaaatgtctat 269  Q
    |||||   ||||||||||||||||  ||||||||||    
T  50810843 aatctcaaactgttaactttaactctaaatgtctat 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 135 - 269
Target Start/End: Original strand, 50864921 - 50865056
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||||||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||||||||||    
T  50864921 gatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaata 50865020  T
Q  235 aatct-tgactgttaactttaacttcaaatgtctat 269  Q
    |||||   ||||||||||||||||  ||||||||||    
T  50865021 aatctcaaactgttaactttaactctaaatgtctat 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 3208485 - 3208658
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||||||| || |||||||||| ||||||||||| ||||| |  |||| |||||||||     
T  3208485 ttatttaatccattggtcctctaattaatttccatttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgt 3208584  T
Q  229 caaataaatcttgactgttaactttaacttcaaatg--tctatggtggaccagccttaaaattggtccatcata 300  Q
    |||||||||| | || ||||| ||||||  ||||||    |||||||||||| |||||| | ||||||| ||||    
T  3208585 caaataaatccttaccgttaagtttaaccccaaatgatattatggtggaccaaccttaagagtggtccaccata 3208658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 18442255 - 18442399
Alignment:
Q  131 atttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgcca 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||| |||| |||   |||| |||  ||||||    
T  18442255 atttgatccattggtcctctaaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatca---ttttttcctcttgcca 18442351  T
Q  231 aataaa-tcttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||||| || ||  |||||| ||||||  ||||||||||||||||||||    
T  18442352 aataaattcatg-ttgttaagtttaaccccaaatgtctatggtggacca 18442399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 19487329 - 19487473
Alignment:
Q  131 atttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgcca 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||| |||| |||   |||| |||  ||||||    
T  19487329 atttgatccattggtcctctaaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatca---ttttttcctcttgcca 19487425  T
Q  231 aataaa-tcttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||||| || ||  |||||| ||||||  ||||||||||||||||||||    
T  19487426 aataaattcatg-ttgttaagtttaaccccaaatgtctatggtggacca 19487473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 278
Target Start/End: Original strand, 40364320 - 40364470
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | |||| | |||||||||||||||||||||||||||||  | ||||||||||  ||||||||  ||||||||  |||||||||||||||    
T  40364320 ttatttgatctaatggttccctaaataatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgc 40364419  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    ||||||||| |||   |||||| |||||| | |||||||||||||| ||||    
T  40364420 caaataaatccttcggtgttaagtttaacctaaaatgtctatggtgaacca 40364470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 42684880 - 42685086
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||  ||| ||||||||||| ||||||||||||||||  || ||| |||||| |  ||||||| ||||||||  |||||||  |||| |    
T  42684880 ttatttgatccatt--tcc-ctaaataattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttac 42684976  T
Q  229 caaataaatc-ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    |||||||||| ||||||||||| ||||||  ||||||||||||||| ||||  ||||| | ||||||| |||| |||||  ||||||| ||||||| |||    
T  42684977 caaataaatccttgactgttaagtttaaccccaaatgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaac 42685076  T
Q  328 ctttagatct 337  Q
    | || |||||    
T  42685077 cgtttgatct 42685086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 53612897 - 53613101
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| || ||||||||||     ||||||  |||||||  |||| ||| ||||||||||||||||  ||| |||||||||    
T  53612897 taatttcttgttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcctctgtttgccaaataaatcccgaccgttaacttt 53612996  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||||||| || |||| | |||||| |||| |||  ||||||         || |||||||||||| || ||||||||||| |||||||||    
T  53612997 aacttcaaatgtctatgatgaaccaactttaaaagtggttcattgtagacc---------ttattaattttaaccattcgatctatttatcataaaaggg 53613087  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  53613088 accgttagatcttc 53613101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 3209959 - 3209843
Alignment:
Q  251 tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaa 350  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||| || |||||  ||| |||||||||||||||| || ||||||||||| ||||||    
T  3209959 tttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtaaaccttattaattttgttaattttaaccatttgatctatttatcataaaa 3209860  T
Q  351 gggaccgttagatcttc 367  Q
     | ||||||||||||||    
T  3209859 tgaaccgttagatcttc 3209843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 135 - 269
Target Start/End: Original strand, 50809428 - 50809563
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||| ||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||||||||||    
T  50809428 gatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaata 50809527  T
Q  235 aatct-tgactgttaactttaacttcaaatgtctat 269  Q
    |||||   ||||| ||||||||||  ||||||||||    
T  50809528 aatctcaaactgtcaactttaactctaaatgtctat 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 50866434 - 50866299
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||| ||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||||||||||    
T  50866434 gatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaata 50866335  T
Q  235 aatct-tgactgttaactttaacttcaaatgtctat 269  Q
    |||||   ||||| ||||||||||  ||||||||||    
T  50866334 aatctcaaactgtcaactttaactctaaatgtctat 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 278
Target Start/End: Complemental strand, 20288327 - 20288189
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    ||||||| |||| ||||||  ||||||||||||| || || |||||||||| |  | || |||||||||||||||| |||| ||| | ||||||||| |     
T  20288327 ttggtcccctaattaatttttagttttcattttgatcccataattaataaaactcatgtgttggtccctcaagtttgtctctgttagtcaaataaatccc 20288228  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  20288227 tgactgttaagtttaactccaaatgtctatggtggacca 20288189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 36176622 - 36176512
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagttttt-ctccgtttg 227  Q
    |||||||||||| |||||| || | |||||||| ||||||||||||||| |||||||||||||  ||| ||||||||||||||  ||||| ||| |||||    
T  36176622 ttatttgatccaatggtcccctgattaatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgtttg 36176523  T
Q  228 ccaaataaatc 238  Q
    |||||||||||    
T  36176522 ccaaataaatc 36176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 304
Target Start/End: Complemental strand, 12108098 - 12107917
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || | ||||  |||||||||||||||||||||||||||| ||||| ||||||| | ||  |||||||||||||  |||| ||||||||||    
T  12108098 ttatttgattcaatagtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgc 12107999  T
Q  229 caa---ataaatcttgactgttaactttaacttcaaatg---tctatggtggaccagccttaaaattggtccatcatagacc 304  Q
    |||   |||||||  |  |||||| ||||||  ||||||   | |||||||||||| |||||||| ||||||| ||||||||    
T  12107998 caaataataaatcacgggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagacc 12107917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 273
Target Start/End: Original strand, 24403240 - 24403385
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||| || |||||||| |||| |||||||||||||||||| |||||||| ||||||||||   || ||||||||||||||||||   |||||||||     
T  24403240 ttatttggtctattggtccactaattaatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctcaagttcacctccgtttgt 24403339  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtg 273  Q
    ||| ||||| | ||  |||||||||||||   ||||||||||||||    
T  24403340 caagtaaatccatgtttgttaactttaaccctaaatgtctatggtg 24403385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 53187560 - 53187668
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | |||||| |||||||||||||||||||||||||| ||| ||||||||||||  ||| | ||||||||||||  ||||  |||||||||    
T  53187560 ttatttgatcgaatggtcccctaaataatttcaagttttcattttgatcttacaattaataaaatgtatg-tttggtccctcactttttcttccgtttgc 53187658  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  53187659 caaataaatc 53187668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 36175306 - 36175410
Alignment:
Q  171 tttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatg 270  Q
    |||||| ||| ||||||| || ||||||||||||| |||||  |||||||||||||||||||||||||  ||||||||| ||||||  ||||||||||||    
T  36175306 tttggtgtcataattaatgaaacgtacgttttggtgcctcatttttttctccgtttgccaaataaatccggactgttaagtttaaccccaaatgtctatg 36175405  T
Q  271 gtgga 275  Q
     ||||    
T  36175406 atgga 36175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 141 - 302
Target Start/End: Complemental strand, 3455728 - 3455565
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    ||||||| | || ||||||||||||||||||||||||||| || ||||||| |  | |||||||||| ||| |||| |||||||  | |||||||||| |    
T  3455728 ttggtccccgaattaatttcaagttttcattttggtctcataactaataaaactcatgttttggtccttcatgtttgtctccgtcagtcaaataaatcct 3455629  T
Q  241 gactgttaactttaacttc---aaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||| ||||||||||||  |   |||||| |||||||||||| |||||| | ||||||| ||||||    
T  3455628 gacagttaactttaaccccccaaaatgt-tatggtggaccaaccttaagagtggtccaccataga 3455565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 41544663 - 41544772
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| ||| |||||||||  ||||||||||||||||||||||||||||  | |||||||| | |||||||||  ||||||||  |||| ||| ||||||    
T  41544663 ttattagattcattggtccattaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgc 41544762  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  41544763 caaataaatc 41544772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 53421856 - 53421767
Alignment:
Q  149 ctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||| |||||| | ||||||||||| |||  |||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||    
T  53421856 ctaattaattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatc 53421767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 34819399 - 34819225
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| ||||   |||||||||||||||||||||||| ||  |||||||||||| |||||||||  |||| || | |||||||| ||||||    
T  34819399 ttatttgatccattagtccctcaaataatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttc-actttttctctgtttgc 34819301  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||   |||| ||||||| ||||||  |||   |||||||| ||||| || |||||| | ||||||| ||||||    
T  34819300 caaatagtccttg-ctgttaagtttaaccccaaatgatgtctatagtggatcaaccttaagagtggtccaccataga 34819225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 41264743 - 41264658
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct 239  Q
    |||||||| |||||||||||||||||||| ||||||||     ||||||| |||||||  ||||||||||||||||||||||||||    
T  41264743 taatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtttgccaaataaatct 41264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 20336702 - 20336622
Alignment:
Q  199 ttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||||||||||||||||| |||||||| | ||||||||| | |||||||||| ||||||| |||||||||||| |||||||    
T  20336702 ttttggtccctcaagtttgtctccgttagtcaaataaattcatgactgttaagtttaactccaaatgtctatgttggacca 20336622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 306
Target Start/End: Original strand, 12106629 - 12106752
Alignment:
Q  183 attaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagcct 282  Q
    ||||||||| ||||| |||||||||||||  |||||||||||||  |||||||||| |  |||| ||||||||| | ||||||||||  ||||||||  |    
T  12106629 attaataaaacgtacattttggtccctcacttttttctccgtttatcaaataaatcctttctgtcaactttaaccttaaatgtctattatggaccagtat 12106728  T
Q  283 taaaattggtccatcatagacctt 306  Q
    || || ||||||| | ||||||||    
T  12106729 tataaatggtccaccgtagacctt 12106752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 28909705 - 28909548
Alignment:
Q  144 gtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct-tga 242  Q
    ||||||||| ||||||  |||||||||||||||| || || ||||||| |  | |||||||||||||| |||| |||||||| | ||||||||||| |||    
T  28909705 gtcctctaattaattttcagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgttggtcaaataaatctctga 28909606  T
Q  243 ctgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |  |||| ||||||  ||||| ||| ||||| ||||  |||||  |||||||| ||||||    
T  28909605 c--ttaagtttaaccccaaatatctgtggtgaaccactcttaaggttggtccaccataga 28909548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 55328425 - 55328358
Alignment:
Q  124 taagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    |||| |||||||||||||| |||  |||| ||||||||||||||||||||| ||||| ||||||||||    
T  55328425 taagcttatttgatccattagtctcctaattaatttcaagttttcattttgatctcataattaataaa 55328358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 42592693 - 42592778
Alignment:
Q  282 ttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaagggaccgttagatcttc 367  Q
    |||||| ||||| ||  ||||||||  ||| |||||||||||||||| || ||||||||||| |||||| ||||| ||||||||||    
T  42592693 ttaaaagtggtctattctagaccttattaattttgttaattttaaccattcgatctatttatcataaaatggaccattagatcttc 42592778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 8796418 - 8796366
Alignment:
Q  139 cattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    |||||||| ||||||||||||||| |||| ||||| |||||||||||||||||    
T  8796418 cattggtcatctaaataatttcaaatttttattttagtctcacaattaataaa 8796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 20314809 - 20314737
Alignment:
Q  199 ttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaactttaacttcaaatgtctatg 270  Q
    |||||||||||||||||| |||| ||| | ||||||||| | |||||||||| ||||||| ||||||||||||    
T  20314809 ttttggtccctcaagtttgtctctgttagtcaaataaattcatgactgttaagtttaactccaaatgtctatg 20314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 3210046 - 3209984
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    ||||||||| || ||||||  |||||||||| || |||||||||||||| |||||||||||||    
T  3210046 ttatttgattcaatggtcccttaaataattttaaattttcattttggtcccacaattaataaa 3209984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 8795932 - 8795986
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttg 174  Q
    |||||| | ||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  8795932 aaaataggcttattagatccattgatcccctaaataatttcaagttttcattttg 8795986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 306
Target Start/End: Complemental strand, 23443572 - 23443394
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| || |||  ||| |||||| || |||||||||||||| || |||||||||| ||||| |||  |||| |||  ||||  || ||||||    
T  23443572 ttatttgatccaatgatcccttaattaattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgc 23443473  T
Q  229 caaataaatcttgactgttaactttaa-cttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    |||||||||| |   |||||| ||||| |  ||||||||||| ||| | ||  ||||||| | ||||| ||||||||||    
T  23443472 caaataaatcattggtgttaagtttaacccccaaatgtctattgtgaatcaatcttaaaagtagtccaccatagacctt 23443394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 26886298 - 26886407
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  ||||||||||||||| ||||||||||||      |||||| ||||||| |||| |||| ||||||||||||||||  ||||||||| ||     
T  26886298 taatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatc-cgactgttaatttc 26886396  T
Q  254 aacttcaaatg 264  Q
    ||| |||||||    
T  26886397 aacctcaaatg 26886407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 3808048 - 3807980
Alignment:
Q  169 attttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat 237  Q
    ||||||||||||||||||||||| |  ||||||| |||| |||  |||||| | |||||||||||||||    
T  3808048 attttggtctcacaattaataaaactcacgttttagtccttcacttttttcacagtttgccaaataaat 3807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 53614363 - 53614213
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||| ||||||||| ||||||||||||| |   |||||| ||||||||  |||| |||  |||||||||||||||  | | ||||| |||    
T  53614363 taatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctatttgccaaataaatccaggc-gttaagttt 53614265  T
Q  254 aacttca---aatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  ||   ||||||||||||||| || |||||| | ||||||| ||||||    
T  53614264 aaccccaaataatgtctatggtggatcatccttaagagtggtccaccataga 53614213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 12105313 - 12105353
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  12105313 aaataatttcaagttttcatattggccccacaattaataaa 12105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 38247586 - 38247482
Alignment:
Q  134 tgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaat 233  Q
    ||||||||||||||  ||| ||||||| | ||||||||||||||  | || ||||||| ||||| ||||||| ||| |  |||  | ||||||||||||     
T  38247586 tgatccattggtcccttaattaatttccaattttcattttggtcatataagtaataaaacgtacattttggttccttagttttcacaccgtttgccaaaa 38247487  T
Q  234 aaatc 238  Q
    |||||    
T  38247486 aaatc 38247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 43346433 - 43346365
Alignment:
Q  260 aaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||| ||||||||| | ||| |  ||||||| ||||||||||  ||||||| ||||||||||||    
T  43346433 aaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaacc 43346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 44182323 - 44182391
Alignment:
Q  169 attttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat 237  Q
    ||||||||||||||||||||||| |  ||||||| |||| |||  |||| | | |||||||||||||||    
T  44182323 attttggtctcacaattaataaaactcacgttttagtccttcactttttccacagtttgccaaataaat 44182391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 53622700 - 53622822
Alignment:
Q  166 ttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaa---a 262  Q
    |||||||||||| |||||||||||||   ||  ||||| ||||| |  |||| ||||||||||||| ||||||   || ||||| ||||||  |||   |    
T  53622700 ttcattttggtcgcacaattaataaaaaatatattttgatcccttagattttcctccgtttgccaactaaatcccaacggttaagtttaaccccaaatga 53622799  T
Q  263 tgtctatggtggaccagccttaa 285  Q
    |||||||||||||||| ||||||    
T  53622800 tgtctatggtggaccaaccttaa 53622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 43459456 - 43459694
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||  |||||||| ||||| ||||||||||    
T  43459456 ttatttgatccattagtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgc 43459555  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||| | ||||||| ||||||| ||||||||||||||||| || |||||||| |||| |||| ||||||||  ||| ||||||||||||||||    
T  43459556 caaataaatctcggctgttaagtttaactccaaatgtctatggtggatcaaccttaaaaatggtacatcgtagaccttattaattttgttaattttaacc 43459655  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| ||||||| |||||||||||||||    
T  43459656 attcgatctatttatcataaaagagaccgttagatcttc 43459694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 129 - 367
Target Start/End: Complemental strand, 32256510 - 32256273
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||||| || ||||||||||  |||| |||||||||||||  |||| |||| |||||    
T  32256510 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgc 32256411  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    |||||||||    || |||||||||||||||||||||||||||||||||| | |||||| ||||||||  || ||||| || | ||||||||||||||||    
T  32256410 caaataaattccaaccgttaactttaacttcaaatgtctatggtggaccaacattaaaagtggtccattgtaaaccttaat-attttgttaattttaacc 32256312  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || |||| |||||| |||||||||||||||||||||||    
T  32256311 gttcgatccatttatcataaaagggaccgttagatcttc 32256273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 129 - 328
Target Start/End: Original strand, 47454338 - 47454537
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   ||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  47454338 ttatttgatccagtggtccctcaaataatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttcttcgtttgc 47454437  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  |||| ||||||||||||  ||||||||||||| ||||| |||||| | ||||||||| ||||||||  ||| ||| ||||||||||||    
T  47454438 caaataaatcccgactattaactttaactctaaatgtctatggtagaccaaccttaagagtggtccatcgtagaccttattaattttattaattttaacc 47454537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 141 - 367
Target Start/End: Original strand, 11501193 - 11501419
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||| ||| |||||||| ||||||||||||||| |||| ||||||||     | |||| ||||||||  |||| |||| |||||||||||||||      
T  11501193 ttggtcctttaattaatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttgccaaataaatccc 11501292  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatt 340  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||| |||  ||||||||  ||| |||||||||||||||| || ||||||||    
T  11501293 gactgttaactttaacttcaaatgtctatggtggaccaaccttaaaagtggttcattgtagaccttattaattttgttaattttaaccattcgatctatt 11501392  T
Q  341 tatgataaaagggaccgttagatcttc 367  Q
    ||| ||||||| |||| ||||||||||    
T  11501393 tatcataaaagagaccattagatcttc 11501419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 214 - 367
Target Start/End: Complemental strand, 22337401 - 22337248
Alignment:
Q  214 tttttctccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaat 313  Q
    |||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||  | || || | ||||||||  ||| |    
T  22337401 ttttcctccgtttgccaaataaatcctgaccgttaaatttaacttcaaatgtctatggtggaccaaccttaaatgtagtacaccgtagaccttattaatt 22337302  T
Q  314 ttgttaattttaacctttagatctatttatgataaaagggaccgttagatcttc 367  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  22337301 ttgttaattttaacatttcgatctatttatcataaaagggaccgttagatcttc 22337248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 22538938 - 22538729
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| |||||| |||||||| |||||||||||||    ||||||| ||||||||  |||| ||||||||||||||||||||| ||| |||||||||    
T  22538938 taatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtttgccaaataaatctcgacggttaacttt 22538839  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||| ||||| ||||||||| |||| | ||||||  |||| ||| |||||||   ||| |||||| |||| || | || |||||| ||||||||||||||    
T  22538838 aactccaaatatctatggtgtaccaacattaaaagcggtctatcgtagacctcattaattttgtttatttcaatcattcgatctaattatgataaaaggg 22538739  T
Q  354 accgttagat 363  Q
    ||||||||||    
T  22538738 accgttagat 22538729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 41079942 - 41079716
Alignment:
Q  136 atccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataa 235  Q
    ||||||||||||   || ||||||| | |||| ||||||||| |||||| |||||| ||||||||||||||||| |  |||| |||||||||| ||||||    
T  41079942 atccattggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccgtttgctaaataa 41079844  T
Q  236 atcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagat 335  Q
    |||   || ||||||||||||| ||||| ||||||||||| || | |||||| ||||||||| ||||||||  ||| |||||| ||||||||| ||  ||    
T  41079843 atccctaccgttaactttaactccaaatatctatggtggaacaacattaaaagtggtccatcgtagaccttattaattttgttgattttaaccattcaat 41079744  T
Q  336 ctatttatgataaaagggaccgttagat 363  Q
    |||||||| |||||||| | ||||||||    
T  41079743 ctatttatcataaaaggaatcgttagat 41079716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 129 - 327
Target Start/End: Complemental strand, 6173565 - 6173369
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||  | || |||||||||| ||||| |||||||||||||  |||| ||||||||||    
T  6173565 ttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgtttgc 6173466  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    ||||||||||    || ||||||||||||  |||| ||||| |||||||| | |||||| ||||||||| |||||||| |||| ||||||||| |||||    
T  6173465 caaataaatc-catctattaactttaactctaaatatctatagtggaccaactttaaaagtggtccatcgtagacctt-ataattttgttaatcttaac 6173369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 47060570 - 47060404
Alignment:
Q  149 ctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgtta 248  Q
    |||| |||||| |||||||||||||||||  | |||||||||| |||||||||||||||||||   |||| |||||||||||||||||||  ||||||||    
T  47060570 ctaattaattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccggactgtta 47060471  T
Q  249 actttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaattt 315  Q
    | ||||||  ||||||| |||||||||||| |||||| | | ||||| ||||||||||  |||||||    
T  47060470 agtttaacaccaaatgtatatggtggaccaaccttaagaatagtccaccatagaccttattaaattt 47060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 129 - 306
Target Start/End: Complemental strand, 47456490 - 47456320
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||  ||||  || ||||||    
T  47456490 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtttgc 47456391  T
Q  229 caaataaatcttgactgttaac-tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    ||||||||||| |||||||||| ||||||        ||||||||||| || | |||||| ||||||||||||||||||    
T  47456390 caaataaatctcgactgttaacttttaac--------tctatggtggaacaactttaaaagtggtccatcatagacctt 47456320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 320
Target Start/End: Complemental strand, 40509849 - 40509658
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||| | || |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||  || |||||  |||| |||||||| |    
T  40509849 ttatttgtttcaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttac 40509750  T
Q  229 caaataaatc-ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaa 320  Q
    |||||||||| ||   |||||| ||||||  ||||||||||| |||||||| |||||| | ||||||| |||||| |||||| ||||| ||||    
T  40509749 caaataaatcattcggtgttaagtttaaccccaaatgtctatagtggaccaaccttaagagtggtccaccataga-cttcattaattttttaa 40509658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 32602934 - 32603044
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||| || |||||||||| |||||||||| ||||||||  |||| ||||||||||    
T  32602934 ttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgtttgc 32603033  T
Q  229 caaataaatct 239  Q
    |||||||||||    
T  32603034 caaataaatct 32603044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 40812703 - 40812491
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||  || |||||||||| ||||||||||| |||||||  |||| ||| ||||| |||||| |||  ||||||| |||||    
T  40812703 taatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtttgtcaaatatatcccgactgtttacttt 40812604  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataa---atttgttaattttaacctttagatctatttatgataaaa 350  Q
    |||| |||||  | ||||||||||| |||||||| || |||||| |||| |||  |||    |||||||||||||| | || |||||||||||  |||||    
T  40812603 aactccaaataaccatggtggaccaaccttaaaagtgatccatcgtagatcttattaatttttttgttaattttaatcgttcgatctatttatcttaaaa 40812504  T
Q  351 gggaccgttagat 363  Q
    |||||||||||||    
T  40812503 gggaccgttagat 40812491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 45455492 - 45455360
Alignment:
Q  124 taagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccg 223  Q
    |||| |||||||||||  ||||||  ||| ||||||||| |||||||||||||| ||||||||||||| ||||| ||||| |||||||  ||||||||||    
T  45455492 taagcttatttgatccgatggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccg 45455393  T
Q  224 tttgccaaataaatcttgactgttaactttaac 256  Q
    ||||||||||||||| || ||||||| ||||||    
T  45455392 tttgccaaataaatcatggctgttaagtttaac 45455360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 30333296 - 30333395
Alignment:
Q  139 cattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||  |||||||||||||| ||||||||||    
T  30333296 cattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatc 30333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 275
Target Start/End: Original strand, 40508379 - 40508526
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||||  |||| ||||||| ||    
T  40508379 ttatttgatccaatggtcccctaaataatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagc 40508478  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtgga 275  Q
    ||||||||| |||   |||||| |||||   |||||||||||||||||    
T  40508479 caaataaatccttcggtgttaagtttaatcccaaatgtctatggtgga 40508526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 320
Target Start/End: Complemental strand, 4300163 - 4299972
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | |||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||  |||| ||| ||||||    
T  4300163 ttatttgatccaatcgtcccctgaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgc 4300064  T
Q  229 caaataaatc-ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaa 320  Q
    |||||||||| ||   |||||| ||||||  |||| |||||| ||||| || |||||| | ||| ||| |||||| |||||| ||||| ||||    
T  4300063 caaataaatctttcggtgttaagtttaaccccaaacgtctatagtggatcaaccttaagagtggcccaccataga-cttcattaattttttaa 4299972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 306
Target Start/End: Original strand, 47059109 - 47059288
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| ||| || |||||| |||| |||||| |||||||||||||||||  ||||||||||||  |||||||||| |||||||  |||| ||||||||||    
T  47059109 ttattagattcaatggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtttgc 47059208  T
Q  229 caaataaatcttgactgttaactttaa--cttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    |||||||||| |||| ||||| |||||  || |||| |||||||||||| || |||||| | | | ||| ||||||||||    
T  47059209 caaataaatcctgaccgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagtagcccaccatagacctt 47059288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 151 - 320
Target Start/End: Complemental strand, 22115257 - 22115088
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttgactgttaa 249  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||  || |||||  |||| |||||||  ||||||||||| ||   ||||||    
T  22115257 aaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatcnttcggtgttaa 22115158  T
Q  250 ctttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaa 320  Q
     ||||||  ||||||||||| |||||||| |||||| | ||||||| |||||| |||||| ||||| ||||    
T  22115157 gtttaaccccaaatgtctatagtggaccaaccttaagagtggtccaccataga-cttcattaattttttaa 22115088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 120 - 276
Target Start/End: Original strand, 30310113 - 30310270
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttc 219  Q
    |||||| | |||||||||||| | ||||  |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||  || |||||  |||| |    
T  30310113 aaaataggcttatttgatccaatagtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcc 30310212  T
Q  220 tccgtttgccaaataaat-cttgactgttaactttaacttcaaatgtctatggtggac 276  Q
    |||||||||||||||||| |  |||||||||  |||||  ||||||||||||||||||    
T  30310213 tccgtttgccaaataaatcccagactgttaaagttaaccccaaatgtctatggtggac 30310270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 141 - 337
Target Start/End: Complemental strand, 9662339 - 9662144
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||||||| ||||||||||||||||| || ||  || || ||| ||| |  | |||||||||||||| |||| |||||||  | ||||||||||      
T  9662339 ttggtcctctaattaatttcaagttttcatcttagttccataactaaaaaaactcatgttttggtccctcacgtttgtctccgtcggtcaaataaatcca 9662240  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
    ||||||||| |||||||||||||||||||||||||||| | ||| |  | ||||| |||||||||| || ||||| | |||||||||| || |||||    
T  9662239 gactgttaaatttaacttcaaatgtctatggtggaccaacattatagatagtccaccatagacctt-attaatttttcaattttaaccatttgatct 9662144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 294
Target Start/End: Complemental strand, 33779199 - 33779036
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||| |  ||||||| |||||||   |||| |||||    |    
T  33779199 ttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg---cc 33779103  T
Q  229 caaataaatc-ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtcc 294  Q
    | |||||||| ||| ||||||| ||||||  |||||||||||||||||||| |||||| | ||||||    
T  33779102 ccaataaatctttggctgttaagtttaaccacaaatgtctatggtggaccaaccttaagagtggtcc 33779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 141 - 337
Target Start/End: Original strand, 3413545 - 3413742
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    ||||||||||||||||||||  |||||||||||||||  ||||||||||||     |||||| ||||||||  |||| ||| ||||||||||||||| |     
T  3413545 ttggtcctctaaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactctgtttgccaaataaatccc 3413644  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt-aattttaacctttagatct 337  Q
    | |||||||| |||||||||| |||||||||||||| ||  ||||| | | ||||| |||||| |||||| ||||| || |||||||||| || |||||    
T  3413645 taactgttaagtttaacttcagatgtctatggtggatcaatcttaagagttgtccaccataga-cttcattaattttttaaattttaaccgtttgatct 3413742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 43460916 - 43460763
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    |||| |||| ||||||||||||||||| ||||||||||||| ||||| |||| ||||||||  |||| |||| ||||||||||||||| | || |||||     
T  43460916 aaattatttgaagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcctcacagttaag 43460817  T
Q  251 tttaacttcaa--atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||  ||  ||||||||||||||||| | |||| | ||||||| ||||||    
T  43460816 tttaactcaaattatgtctatggtggaccaactttaagagtggtccaccataga 43460763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 144 - 274
Target Start/End: Original strand, 11344523 - 11344651
Alignment:
Q  144 gtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttga 242  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||  |||| |||   ||||||||||||| |||||||||| ||      
T  11344523 gtcctctgaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttca---ttttctccgtttgtcaaataaatctttcg 11344619  T
Q  243 ctgttaactttaacttcaaatgtctatggtgg 274  Q
     |||||| |||||| |||||| ||||||||||    
T  11344620 gtgttaagtttaacctcaaatatctatggtgg 11344651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 13562848 - 13563052
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||| ||||||||| ||||| |||||||     |||||| ||||||||  |||||||| |||| |||||||||||  || ||||||||||    
T  13562848 taatttcttgtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctctgtttaccaaataaatcccgattgttaacttt 13562947  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||||||  ||||||| |||||||| |||| ||         || || |  || |||||||||||| || ||||||||||| |||||||||    
T  13562948 aacttcaaatgtctataatggaccaaccttaaaagtggttca---------ttgatgaccttattaattttaaccgtttgatctatttatcataaaaggg 13563038  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  13563039 accgttagatcttc 13563052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 30311584 - 30311475
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||| | |||||||  ||||||||  |||||||| ||| ||    
T  30311584 ttatttgatccattagtcccctaaataatttcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttttctctgttagc 30311485  T
Q  229 caaataaatc 238  Q
    ||| ||||||    
T  30311484 caattaaatc 30311475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 45454039 - 45454148
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||  | |||||| |||| |||||||| |||||||||||||||||| |||||||||| | |||||||| ||||||||  |||| ||||||||||    
T  45454039 ttatttgattaaatggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgc 45454138  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  45454139 caaataaatc 45454148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 32255012 - 32255166
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    |||||||||||| |||| ||||||||| || |||||||||| ||||| ||||| |||||||  |||| ||||||||||||||||||||  ||| |||||     
T  32255012 aaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatcccgacggttaag 32255111  T
Q  251 tttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||  |||   |||| |||||||||||| |||||| | ||||||| ||||||    
T  32255112 tttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccataga 32255166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 30334746 - 30334648
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||    |  ||||||||||||||||    
T  30334746 gatccattggtcccctaactaatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctca----tccctccgtttgccaaata 30334651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 33096870 - 33096979
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   ||||||||||||||| ||||||| | | ||||||||||||| | ||| |||||||||||||  |||| ||||||||||    
T  33096870 ttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgtttgc 33096969  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  33096970 caaataaatc 33096979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 275
Target Start/End: Complemental strand, 24283090 - 24282944
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||| ||||| ||| |||||||||||  |||||||||||||  ||||||||| |||  |  || ||| ||||||||  |||| ||||||||||    
T  24283090 ttatttgatccgttggttctccaaataatttcagattttcattttggttccacaattaaaaaacagg-cgctttagtccctcacattttcctccgtttgc 24282992  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatggtgga 275  Q
    ||||||||||  ||  |||||||||||||  |||||||||||||||||    
T  24282991 caaataaatccatgggtgttaactttaaccccaaatgtctatggtgga 24282944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 4298714 - 4298823
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||| ||||||||||| ||||||| |||||| || |||||||||||||  ||  ||||  ||||||||  |||| ||| ||||||    
T  4298714 ttatttgatccaatggtcccctaaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtttgc 4298813  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  4298814 caaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 13564329 - 13564179
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| ||||||||||||| |   |||||| ||||||||  |||| ||||||||||||||||||||  ||| ||||| |||    
T  13564329 taatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatcccgac-gttaagttt 13564231  T
Q  254 aacttca---aatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  ||   ||||||||||||||| || |||||| | ||||||| ||||||    
T  13564230 aaccccaaataatgtctatggtggatcatccttaagagtggtccaccataga 13564179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 22336005 - 22336155
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||| ||||||||||||||||  || |||||| |||    
T  22336005 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtttgccaaataaatcccgaatgttaagttt 22336104  T
Q  254 aacttcaaatg--tctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  ||||||   |||||||||| || |||||||| ||||||| ||||||    
T  22336105 aaccccaaatgatgctatggtggatcaaccttaaaagtggtccaccataga 22336155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 302
Target Start/End: Complemental strand, 11502525 - 11502361
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||| ||| |||||||| |||||||||||| || |||| ||||||||   | ||  || ||||||||| |||| ||| ||||||||||||||||      
T  11502525 ttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgtttgccaaataaatccc 11502426  T
Q  241 gactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
     || ||||| |||||| ||||   ||||||||||| ||||| |||||| | ||||||| ||||||    
T  11502425 aacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccataga 11502361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 24281091 - 24281185
Alignment:
Q  145 tcctctaaataatttcaagttttcattttggtctcacaattaataaatcgta-cgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||    | |||||| ||||||||| ||||| |||||| ||||||||||||    
T  24281091 tcctctaaataatttcatgtttttattttggtcccacaattaataaaaacaagcgttttagtccctcaattttttatccgttcgccaaataaatc 24281185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 15992247 - 15992293
Alignment:
Q  239 ttgactgttaactttaacttcaaatgtctatggtggaccagccttaa 285  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  15992247 ttgactgttaactttaacctcaaatgtctatggtggaccaaccttaa 15992293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 22690400 - 22690509
Alignment:
Q  161 aagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct-tgactgttaactttaacttc 259  Q
    ||||||||||||| ||  |||||||||||||   | |||||||||| |||  ||||| | | |||||||||||||||||  ||| ||||| |||||||||    
T  22690400 aagttttcatttttgttccacaattaataaaagttccgttttggtctctcgggttttcccctgtttgccaaataaatctcggacagttaattttaacttc 22690499  T
Q  260 aaatgtctat 269  Q
    ||||||||||    
T  22690500 aaatgtctat 22690509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 3414934 - 3414840
Alignment:
Q  144 gtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||| ||||||||||||| ||||||||||||||| || ||||||||||     |||||| |||| |||  |||| |||| |||||||||||||||    
T  3414934 gtcccctaaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatttgccaaataaatc 3414840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 24844330 - 24844399
Alignment:
Q  197 cgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaatgtc 266  Q
    |||||| ||||||||  ||||  ||||||||||||||||||| | |||||||| |||||| |||||||||    
T  24844330 cgttttagtccctcacattttcttccgtttgccaaataaatcctcactgttaagtttaacctcaaatgtc 24844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 40811341 - 40811394
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcaca 182  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||||| ||||    
T  40811341 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccaca 40811394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 337
Target Start/End: Complemental strand, 669386 - 669295
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
    |||||||||||| |||||||||||||||||||||  ||||| | ||||||| |||||| | |  ||| ||||||||||| |||| || |||||    
T  669386 gttaactttaacctcaaatgtctatggtggacca-tcttaagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgatct 669295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 22537595 - 22537694
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaat 263  Q
    |||||||||||||| |||||||| ||||    || ||||| ||||||| |||| |||| ||||||||||||||||   |||||||| |||||| ||||||    
T  22537595 ttttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtctctgtttgccaaataaatc-caactgttaattttaacctcaaat 22537693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 256
Target Start/End: Original strand, 25533214 - 25533317
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct-tgactgttaactt 252  Q
    |||||||||||||||||||||||| || || |||||||    | |||||||||| |||| | | |||||||  | ||||||||||| |||||||||| ||    
T  25533214 taatttcaagttttcattttggtcccataactaataaaattcatgttttggtccttcaattgtatctccgtcggtcaaataaatctctgactgttaagtt 25533313  T
Q  253 taac 256  Q
    ||||    
T  25533314 taac 25533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 35664396 - 35664286
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| ||||||||| |||  ||| ||||||| | ||||||||||| || || || |||||||   ||| ||||||||||| |  ||| |||||||||||    
T  35664396 ttattagatccattgatcccttaattaatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagttttatctccgtttgc 35664297  T
Q  229 caaataaatct 239  Q
    |||| ||||||    
T  35664296 caaaaaaatct 35664286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 40738942 - 40738844
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaat-cgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    ||||||| ||||| ||||||| ||||| ||||||||| || ||||||||||  |   |||||| ||||||||  |||| ||| ||||||||||||||||    
T  40738942 ttggtcccctaaacaatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgctctgtttgccaaataaatc 40738844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 44554764 - 44554687
Alignment:
Q  246 ttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaatttt 324  Q
    |||||||||||| |||||||||||||||||||| | ||| || ||||||| | |||| |||  ||| ||||||||||||    
T  44554764 ttaactttaactccaaatgtctatggtggaccaacattataa-tggtccaccgtagatcttattaattttgttaatttt 44554687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 46835676 - 46835786
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||| ||||||| ||||||  ||||||||||||| ||||| |||| |||  ||||||||||||  |||  |||  ||| ||||| |||| ||| |||||     
T  46835676 ttatatgatccaatggtcccttaaataatttcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctctgtttgt 46835775  T
Q  229 caaataaatct 239  Q
    |||||||||||    
T  46835776 caaataaatct 46835786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 2414863 - 2414920
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||||||||  |||||||||||  ||||||| |||||||| ||||||| ||||||    
T  2414863 gttaactttaaccccaaatgtctataatggaccaaccttaaaagtggtccaccataga 2414920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 39981431 - 39981492
Alignment:
Q  242 actgttaactttaacttc-aaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||||||  | ||||||||||||||||||| | |||||| ||||||| ||||||    
T  39981431 actgttaactttaacccccaaatgtctatggtggaccaactttaaaaatggtccaccataga 39981492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 16755987 - 16756031
Alignment:
Q  243 ctgttaactttaacttcaaatgtctatggtggaccagccttaaaa 287  Q
    |||||||||||||| |||||||||||||||| | || ||||||||    
T  16755987 ctgttaactttaacctcaaatgtctatggtgaaacaaccttaaaa 16756031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 133 - 367
Target Start/End: Original strand, 45279685 - 45279919
Alignment:
Q  133 ttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaa 232  Q
    ||||| |||| ||| | ||||||||||||| |||||||||| |||  |||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  45279685 ttgattcatttgtcttttaaataatttcaaattttcattttagtcatacaattaataaaacgtacgttttggtccctcaagttttttttcgtttggcaaa 45279784  T
Q  233 taaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaaccttta 332  Q
    ||||||  ||| |||||||||||||  |||||| ||||||||||||| ||||||| ||||| ||| |||||||| |||| |||||||||||||||| ||     
T  45279785 taaatcccgacggttaactttaactctaaatgtatatggtggaccagtcttaaaagtggtctatcgtagaccttaataattttgttaattttaaccattc 45279884  T
Q  333 gatctatttatgataaaagggaccgttagatcttc 367  Q
    |||||||||||||||||||||| ||||||||||||    
T  45279885 gatctatttatgataaaagggatcgttagatcttc 45279919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 41629709 - 41629947
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||| |||||||||||||  |||||||||    
T  41629709 ttatttgatccattagtcccctaaataatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgc 41629808  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  ||| |||||||| |||| |||| |||||||||| |||| |||||||| |||| |||| || |||||  ||| ||||||||||||||||    
T  41629809 caaataaatcccgaccgttaacttgaactccaaaagtctatggtgaaccaaccttaaaagtggttcatcgtataccttattaattttgttaattttaacc 41629908  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     ||  || ||||||| ||||||| |||| ||||||||||    
T  41629909 attcaatttatttatcataaaagagaccattagatcttc 41629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 42100196 - 42099987
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| |||||||||||||||||||||||||||||     ||||||| |||||||  |||| ||||||||||||||||| ||  |||||||||||||    
T  42100196 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtttgccaaataattcccgactgttaacttt 42100097  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||||||||||||| |||||||||| |||||||| ||||||||| ||||||||  ||| |||||||||||||||| || ||||||||||| ||||||||     
T  42100096 aacttcaaatgtctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaattttaaccattcgatctatttatcataaaagga 42099997  T
Q  354 accgttagat 363  Q
    ||||||||||    
T  42099996 accgttagat 42099987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 32797139 - 32797380
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||  |||||||| ||||| |||||||| |    
T  32797139 ttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttac 32797238  T
Q  229 caaataa---atcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaatttta 325  Q
    |||||||   |||  | | ||||| ||||||| |||||||||||| |||| || |||||||| |||| |||| ||||||||  ||| |||||||||||||    
T  32797239 caaataataaatcgcggccgttaagtttaactccaaatgtctatgatggatcaaccttaaaaatggttcatcgtagaccttattaattttgttaatttta 32797338  T
Q  326 acctttagatctatttatgataaaagggaccgttagatcttc 367  Q
    ||| || ||||||||||| ||||||| |||||||||||||||    
T  32797339 accattcgatctatttatcataaaagagaccgttagatcttc 32797380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 32693831 - 32694069
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||| ||||||||||||| | |||| |||||||| |||  |||| ||||||||||    
T  32693831 ttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgc 32693930  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||   || |||||||||||||| |||||| |||| ||||||| |||||||| ||| | ||||||||||||  ||| ||| ||||||||||||    
T  32693931 caaataaatcccaacagttaactttaactttaaatgtatatgatggaccaaccttaaaagtggcctatcatagaccttattaattttattaattttaacc 32694030  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| ||||||| |||| ||||||||||    
T  32694031 gtttgatctatttatcataaaagagaccattagatcttc 32694069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 13116356 - 13116569
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||     |||||| |||| |||  |||| ||||||||||||||||||||  |||||||||||||    
T  13116356 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgtttgccaaataaatcccgactgttaacttt 13116455  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||| |||||||||||  | |||||  ||| | | ||||||||| |||||| |  ||  |||||||||||||||| || ||||||||||| |||||||||    
T  13116456 aactccaaatgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaattttaaccattcgatctatttatcataaaaggg 13116555  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  13116556 accgttagatcttc 13116569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 30786677 - 30786887
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || |||||||  ||||||||| |||||||||||||| || || |||||||||| ||||  ||||| |||||||  |||||||||||||||    
T  30786677 ttatttgattcaatggtccttcaaataattttaagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctccgtttgc 30786776  T
Q  229 caaataaatcttgactgttaac--tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaa 326  Q
    |||||||||   ||||||||||  |||||||  |||||||||||||||| || | |||||| |||||||||||| |||||  ||| ||||||||||||||    
T  30786777 caaataaattccgactgttaactttttaactctaaatgtctatggtggatcaactttaaaagtggtccatcataaaccttattaattttgttaattttaa 30786876  T
Q  327 cctttagatct 337  Q
    || || |||||    
T  30786877 ccgtttgatct 30786887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 6397784 - 6397992
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||  || ||||||||||||||  |||||||||||||| ||||||||||||| | ||| |||| ||||||||  |||||||||||||||    
T  6397784 ttatttgatccattaatcttctaaataatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgc 6397883  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    |||||||||| ||| |||||| ||||||| |||||  |||||||  |||| |||| | | ||||||| ||||||||||  ||| ||| ||||||| ||||    
T  6397884 caaataaatcatgaatgttaaatttaactccaaataactatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaatttaaacc 6397983  T
Q  329 tttagatct 337  Q
     || |||||    
T  6397984 atttgatct 6397992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 120 - 302
Target Start/End: Complemental strand, 42872313 - 42872131
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttc 219  Q
    |||||| | |||||||||||| ||||||  |||||||||| |||||||||||||  ||||| ||| |||||| |||||||||| |||| |||  |||| |    
T  42872313 aaaataggcttatttgatccaatggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcc 42872214  T
Q  220 tccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||| |||||||||| |||| |||||||||||| ||||||||||||||| ||||| |||||| | ||||| | ||||||    
T  42872213 tccgtttgtcaaataaatcctgacggttaactttaacctcaaatgtctatggtagaccaaccttaagagtggtctaccataga 42872131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 129 - 323
Target Start/End: Complemental strand, 8571732 - 8571536
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| |||||||  |||| ||||||||  ||||||||||||||  |||||||||||| ||||||||||||||| |||  ||||||||||||| |    
T  8571732 ttatttgatctattggtctcctaactaatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtttac 8571633  T
Q  229 caaataaat--cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattt 323  Q
    |||||||||  || | ||||||| ||||||  |||||||||||||||||||| | |||||| ||||||| |||| |||||  |||| || |||||||    
T  8571632 caaataaatccctagtctgttaagtttaaccccaaatgtctatggtggaccaactttaaaaatggtccaccatataccttattaaactttttaattt 8571536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 32798647 - 32798472
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| |||| ||||||||| ||||||||||||||     
T  32798647 ttatttgatgcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgt 32798548  T
Q  229 caaataaatcttgactgttaactttaacttcaa--atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| | || ||||| |||||||  ||  |||||||||||||| || |||||| | ||||||| ||||||    
T  32798547 caaataaatcctcacggttaagtttaactcaaatgatgtctatggtggatcaaccttaagagtggtccaccataga 32798472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 32695390 - 32695214
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||  |||| ||| ||||| ||| ||||||    
T  32695390 ttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgtttgc 32695291  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||| | || |||| ||||| ||||||  |||   |||||||||||| ||||  ||||| ||||||||| ||||||    
T  32695290 caaattagtcctgaccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccataga 32695214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 337
Target Start/End: Original strand, 22551030 - 22551216
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaa 249  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||  |||||||||||| | ||||||||| |||||||||||||| || || ||||||    
T  22551030 aaataatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctc-actttttctccatttgccaaataaatcctggattgttaa 22551128  T
Q  250 ctttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
     ||||||  ||||| |||||||||||| | |||||||| || |||| |||| |||||  |||||||  |||||| |||| || |||||    
T  22551129 gtttaaccccaaatctctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttgatct 22551216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 8570119 - 8570228
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||| |||| |||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||  ||| |||| ||||||    
T  8570119 ttatttgatccaatggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtttgc 8570218  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  8570219 caaataaatc 8570228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 42870814 - 42871025
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||| |  ||||  || ||||||    
T  42870814 ttatttgatccaatggtttcctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttgc 42870913  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaatttta 325  Q
    | ||| |||| |||||||||| ||||||  |||   |||||||| ||||||||  ||||| | ||||||| | ||||||||  |||||||  |||||| |    
T  42870914 cgaatgaatcctgactgttaagtttaaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaa 42871013  T
Q  326 acctttagatct 337  Q
    ||| || |||||    
T  42871014 accgtttgatct 42871025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 129 - 343
Target Start/End: Complemental strand, 44076478 - 44076261
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||   |||||||||||| |||| ||||||||| ||||||||||||| ||||  ||||||| |||||| |||| ||||||||||    
T  44076478 ttatttgatccaatggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtttgc 44076379  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaatttta 325  Q
    ||||||||||   || ||||| ||||||  |||   |||||||||||||| || | |||||| || |||| |||| | |||  ||| ||| ||||||| |    
T  44076378 caaataaatccctacagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaatttaa 44076279  T
Q  326 acctttagatctatttat 343  Q
    ||| || |||||||||||    
T  44076278 accatttgatctatttat 44076261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 26696533 - 26696642
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || |||||| |||| |||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||  |||| |||| |||||    
T  26696533 ttatttgattcaatggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgc 26696632  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  26696633 caaataaatc 26696642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 42877645 - 42877793
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||||||||||||||||||||| || ||||||| |  | |||||||||||||| |||| ||| |||  | ||||||||||  ||| |||||||||    
T  42877645 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttcgtcagtcaaataaatcccgacggttaacttt 42877744  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  ||||||| |||||||||||| |||||| | ||||||| ||||||    
T  42877745 aaccccaaatgtgtatggtggaccaaccttaagaatggtccaccataga 42877793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 4810470 - 4810597
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | ||||||   ||||| |||||| |||| ||||||||| || |||||||||| |||| |||||||||| |||| |||||||||||||||    
T  4810470 ttatttgatctaatggtccctcaaatactttcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtttgc 4810569  T
Q  229 caaataaatcttgactgttaactttaac 256  Q
    ||||||||||  ||| ||||||||||||    
T  4810570 caaataaatcccgacggttaactttaac 4810597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 28418813 - 28418936
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||||||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||||||||||    
T  28418813 gatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaata 28418912  T
Q  235 aatct-tgactgttaactttaact 257  Q
    |||||   ||||||||||||||||    
T  28418913 aatctcaaactgttaactttaact 28418936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 28420283 - 28420148
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||||||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||| ||||||    
T  28420283 gatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgtcaaata 28420184  T
Q  235 aatct-tgactgttaactttaacttcaaatgtctat 269  Q
    |||||   ||||||||||||||||  ||||||||||    
T  28420183 aatctcaaactgttaactttaactctaaatgtctat 28420148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 328
Target Start/End: Complemental strand, 30787693 - 30787516
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    ||||||||| ||||||||||||||||| || ||||||||||   ||  |||||||||||||  ||||  ||||||||||||||||||| ||  |||||||    
T  30787693 aaataattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtttgccaaataaatcctgtatgttaac 30787594  T
Q  251 tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    |||||||  |||||| ||| |||||||| | |||||| |||| |||| |||| | | | || ||||||||| ||||||    
T  30787593 tttaactctaaatgtttatagtggaccaactttaaaaatggttcatcgtagaaccttagaattttgttaatcttaacc 30787516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 17338067 - 17338187
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  ||||||||||||||||||||||||| |  |||| ||||||    
T  17338067 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatcgtttctgtcaacttt 17338166  T
Q  254 aacttcaaatgtctatggtgg 274  Q
    ||| |||||||||||| ||||    
T  17338167 aacctcaaatgtctattgtgg 17338187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 6398622 - 6398485
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttca-agttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagttttt 218  Q
    |||| ||| |||||||||  |||||||| ||||||||||| | | ||||||||||||||||| |||||||||| |   |||||| ||||||||  ||||     
T  6398622 aaaaaaagtttatttgatttattggtcccctaaataattttagatttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttc 6398523  T
Q  219 ctccgtttgccaaataaatcttgactgttaactttaac 256  Q
    ||||||||| |||||||||| |||||||||| ||||||    
T  6398522 ctccgtttgtcaaataaatcatgactgttaagtttaac 6398485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 42098589 - 42098739
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||     ||||||| |||| || |||| |||||||||||||||||||||  ||||||||| |||    
T  42098589 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctccgtttgccaaataaatc-cgactgttaatttt 42098687  T
Q  254 aacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  |||   |||||| |||||||||| |||||||| ||||||| ||||||    
T  42098688 aaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccataga 42098739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 211617 - 211705
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |  ||||||| |||||| || ||||||||||||| |||||||||||    
T  211617 taaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 211705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 240639 - 240551
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |  ||||||| |||||| || ||||||||||||| |||||||||||    
T  240639 taaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 240551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 725240 - 725328
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |  ||||||| |||||| || ||||||||||||| |||||||||||    
T  725240 taaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 725328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 793994 - 793906
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |  ||||||| |||||| || ||||||||||||| |||||||||||    
T  793994 taaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 793906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 38696321 - 38696483
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-- 238  Q
    ||||||| |||| |||||| |||||||||||||||||||| || ||||||| |  | |||||||||||||||||||  ||||||  | ||||||||||      
T  38696321 ttggtcccctaattaattttaagttttcattttggtctcataactaataaaactcatgttttggtccctcaagtttgcctccgtcggtcaaataaatccc 38696420  T
Q  239 ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||| || |||| ||||||   ||||||||||||| ||||| |||||||| ||||||| ||||||    
T  38696421 ttg-ctattaagtttaaccctaaatgtctatggtagaccaaccttaaaagtggtccaccataga 38696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 275
Target Start/End: Complemental strand, 17702379 - 17702241
Alignment:
Q  140 attggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgcc--aaataaat 237  Q
    ||||||||  ||| ||||||| | |||||||||||||| || || ||||||| | || ||||||||||||||||||  ||||| |||| |  ||| ||||    
T  17702379 attggtcccttaattaatttccaattttcattttggtcccataactaataaaacctatgttttggtccctcaagttcatctccatttgtcaaaaagaaat 17702280  T
Q  238 ct-tgactgttaactttaacttcaaatgtctatggtgga 275  Q
    || |||| |||||||||||| ||||||||||||||||||    
T  17702279 ctctgaccgttaactttaacctcaaatgtctatggtgga 17702241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 17339639 - 17339530
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  ||||||||||||||  ||||||||||||     | |||| |||||||| ||||| |||||||||||||||||||| |||||||||| |||    
T  17339639 taatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgtttgccaaataaatcctgactgttaagttt 17339540  T
Q  254 aacttcaaat 263  Q
    |||| |||||    
T  17339539 aactccaaat 17339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 41630239 - 41630130
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||| |  |||||||||| || |||||||||| ||||||||||||||||| ||||| |||  ||||||||| |||||||  |||||     
T  41630239 ttatttgatccaatggttccttaaataattttaaattttcattttagtctcacaattaataaaacgtacctttaagtccctcaattttttctatgtttgt 41630140  T
Q  229 caaataaatc 238  Q
     |||||||||    
T  41630139 taaataaatc 41630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 212827 - 212684
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| | |||||||||||  |||||||||| ||| ||||||||| ||| |    ||||| ||||||||  |||| || ||||||     
T  212827 ttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgt 212728  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatgg 271  Q
    ||||||||||| ||  |||||||||||||  |||||||||||||    
T  212727 caaataaatctatgggtgttaactttaaccccaaatgtctatgg 212684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 239427 - 239570
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| | |||||||||||  |||||||||| ||| ||||||||| ||| |    ||||| ||||||||  |||| || ||||||     
T  239427 ttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgt 239526  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatgg 271  Q
    ||||||||||| ||  |||||||||||||  |||||||||||||    
T  239527 caaataaatctatgggtgttaactttaaccccaaatgtctatgg 239570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 726450 - 726307
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| | |||||||||||  |||||||||| ||| ||||||||| ||| |    ||||| ||||||||  |||| || ||||||     
T  726450 ttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgt 726351  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatgg 271  Q
    ||||||||||| ||  |||||||||||||  |||||||||||||    
T  726350 caaataaatctatgggtgttaactttaaccccaaatgtctatgg 726307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 792782 - 792925
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| | |||||||||||  |||||||||| ||| ||||||||| ||| |    ||||| ||||||||  |||| || ||||||     
T  792782 ttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgt 792881  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatgg 271  Q
    ||||||||||| ||  |||||||||||||  |||||||||||||    
T  792882 caaataaatctatgggtgttaactttaaccccaaatgtctatgg 792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 798951 - 798808
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| | |||||||||||  |||||||||| ||| ||||||||| ||| |    ||||| ||||||||  |||| || ||||||     
T  798951 ttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgt 798852  T
Q  229 caaataaatct-tgactgttaactttaacttcaaatgtctatgg 271  Q
    ||||||||||| ||  |||||||||||||  |||||||||||||    
T  798851 caaataaatctatgggtgttaactttaaccccaaatgtctatgg 798808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 13198056 - 13197961
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgt 224  Q
    ||||||| |||| ||||||  ||||||||||| ||||||| |||||||| |||||||||||||  ||||||||  ||||||||  |||| ||||||    
T  13198056 ttatttgctccaatggtccattaaataatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctccgt 13197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 26697912 - 26697798
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaat 263  Q
    |||||||||| ||| || |||||||||| |||||||||| ||||||||  ||||  ||| |||| | |||||||| | | |||||| ||||||  |||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaatcctaattgttaagtttaaccccaaat 26697813  T
Q  264 gtctatggtggacca 278  Q
    || ||||||||||||    
T  26697812 gtttatggtggacca 26697798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 278
Target Start/End: Original strand, 41742087 - 41742217
Alignment:
Q  148 tctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgtt 247  Q
    ||||| |||||||||||||||||||| || | | ||||||||||   || ||||||||||||||  ||| | | | |  | |||||||||||| || |||    
T  41742087 tctaattaatttcaagttttcattttagttttataattaataaaatttatgttttggtccctcacatttgttttcatcggtcaaataaatcttaaccgtt 41742186  T
Q  248 aactttaacttcaaatgtctatggtggacca 278  Q
    ||||||||| |||| ||||| ||||||||||    
T  41742187 aactttaacatcaagtgtctgtggtggacca 41742217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 45281303 - 45281178
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | ||||   |||||||||||||||||||||||||||  ||||||||||||   || |||||| ||| |||  |||| |||| |||||    
T  45281303 ttatttgatccaatagtccctcaaataatttcaagttttcattttggtccaacaattaataaa-aatatgttttgatccttcagattttcctccatttgc 45281205  T
Q  229 caaataaatcttgactgttaactttaa 255  Q
    ||||||||||   || |||||||||||    
T  45281204 caaataaatcccaacagttaactttaa 45281178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 10669450 - 10669386
Alignment:
Q  238 cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||| |||||||||||||| |||||||||||||||| |||| |||||| | ||||||| ||||||    
T  10669450 cttggctgttaactttaacctcaaatgtctatggtgaaccaaccttaagagtggtccaccataga 10669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 24192668 - 24192604
Alignment:
Q  238 cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||| | ||||||| ||||||    
T  24192668 cttgactgttaactttaaccctaaatgtctatggtggaccaaccttaagagtggtccaccataga 24192604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 13117723 - 13117639
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||| ||||||||||||||| || ||||||||||     |||||| ||||||||  |||| ||| ||||||||||||||||    
T  13117723 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatc 13117639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 41743718 - 41743586
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct- 239  Q
    |||||||| ||| |||||| ||||||||||||||||| || || ||||||| | || |||||||||| | || | |||||||||  | |||| ||||||     
T  41743718 ttggtcctttaattaattttaagttttcattttggtcccataagtaataaaacttatgttttggtcctttaattgtttctccgtcggtcaaaaaaatctc 41743619  T
Q  240 tgactgttaactttaacttcaaatgtctatggt 272  Q
      |||||||| ||||||| ||| || |||||||    
T  41743618 acactgttaagtttaactccaagtgcctatggt 41743586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 45437577 - 45437469
Alignment:
Q  149 ctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgtt 247  Q
    |||| ||||||||||||||||||||| || || |||||||||| |  | |||||||||||||  ||||  ||||| | | ||||||||| | ||||||||    
T  45437577 ctaattaatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgctagtcaaataaatccctgactgtt 45437478  T
Q  248 aactttaac 256  Q
    || ||||||    
T  45437477 aagtttaac 45437469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 17455164 - 17455222
Alignment:
Q  244 tgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||||||||||| |||||| | |||||  ||||||| ||||||| ||||||    
T  17455164 tgttaactttaacttcaaatatctatgctagaccaatcttaaaagtggtccaccataga 17455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 29103527 - 29103597
Alignment:
Q  168 cattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||| ||||||||||||| ||||| |||  ||||||||  |||| ||||| |||| |||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatc 29103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 34504755 - 34504669
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtt 215  Q
    ||||||| ||||||||||  |||| ||||||  |||||| ||||| |||||| || ||||||| |  | ||||||||||||||||||    
T  34504755 ttatttggtccattggtctcctaattaattttcagtttttattttagtctcataactaataaaacacatgttttggtccctcaagtt 34504669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 42362752 - 42362691
Alignment:
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||||||||||| | || ||||||||||||||||| | |||| | |||| |||||||||    
T  42362752 gactgttaactttaattccagatgtctatggtggaccaacattaagagtggttcatcataga 42362691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 29104450 - 29104370
Alignment:
Q  159 tcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct 239  Q
    |||| |||| |||||| || ||||||||||||| |||| ||||  ||||||||  |||| ||| ||||| |||||||||||    
T  29104450 tcaaatttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatct 29104370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 37400839 - 37400907
Alignment:
Q  169 attttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat 237  Q
    ||||||||||||||||||||||| |  ||||||| |||| ||| ||||  | | |||||||||||||||    
T  37400839 attttggtctcacaattaataaaactcacgttttagtccttcacgtttcccacagtttgccaaataaat 37400907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 42878919 - 42878883
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtc 177  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  42878919 ttggtcccctaattaatttcaagttttcattttggtc 42878883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 129 - 367
Target Start/End: Complemental strand, 32470690 - 32470452
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||||||  || ||||| ||||| |||||||||     
T  32470690 ttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtttgt 32470591  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  | ||||||| ||||||| |||||||||||||||||  | |||||||| ||||||||| ||||||||  ||| ||||||||||||||||    
T  32470590 caaataaatcccggctgttaagtttaactccaaatgtctatggtggataaaccttaaaaatggtccatcgtagaccttattaattttgttaattttaacc 32470491  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||||  ||||||||||||||    
T  32470490 attcgatctatttatcataaaagaaaccgttagatcttc 32470452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 367
Target Start/End: Complemental strand, 17460799 - 17460571
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||| |||||||| |    
T  17460799 ttatttgatccaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcc 17460700  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  ||| |||||||||||||| |||||||||||||||||||  ||||||| ||||| ||| ||||||         || ||||||||||||    
T  17460699 caaataaatcccgaccgttaactttaactttaaatgtctatggtggaccaatcttaaaagtggtctatcgtagacc---------ttattaattttaacc 17460609  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||| ||||||||||||||||    
T  17460608 attcgatctatttattataaaa-ggaccgttagatcttc 17460571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 199 - 367
Target Start/End: Original strand, 6028787 - 6028956
Alignment:
Q  199 ttttggtccctcaagtttttctccgtttgccaaataaatctt-gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatc 297  Q
    |||||||||||||||||||||| |||||||||||||||| |  ||| |||||||||||||  |||||| ||||||||||||| ||||||| |||||||||    
T  6028787 ttttggtccctcaagtttttcttcgtttgccaaataaatttccgacggttaactttaactctaaatgtatatggtggaccagtcttaaaagtggtccatc 6028886  T
Q  298 atagaccttcataaatttgttaattttaacctttagatctatttatgataaaagggaccgttagatcttc 367  Q
     |||||||| |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  6028887 gtagaccttaataattttgttaattttaaccattcgatctatttatgataaaagggaccgttagatcttc 6028956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 306
Target Start/End: Original strand, 11315934 - 11316111
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||  |||||||| ||||| ||||||||||    
T  11315934 ttatttaattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgc 11316033  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    ||||||||||  | ||||||| ||||| | ||||||||||||||||| || |||||||| ||||||| | ||||||||    
T  11316034 caaataaatcccggctgttaagtttaattccaaatgtctatggtggatcaaccttaaaaatggtccaccgtagacctt 11316111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 43033083 - 43033254
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| || |||  |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||  |||| ||||||||||    
T  43033083 ttatttgatccaatgatcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgc 43033182  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcata 300  Q
    |||||||||| |   |||||| |||||| ||||||||||||||| ||||| |||||| | ||||||| ||||    
T  43033183 caaataaatcctcgatgttaagtttaacctcaaatgtctatggtagaccaaccttaagagtggtccaccata 43033254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 1083014 - 1083227
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||| ||||||||      |||||||||| |||  |||||||||||||||||| ||||||   | ||||||||||    
T  1083014 taatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttctccgtttgccaattaaatcccaagtgttaacttt 1083113  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||  |||| ||||||||||| || |||||||| ||||| ||  ||||||||  ||| |||||||||||||||| || ||||||||||| |||||| ||    
T  1083114 aactctaaatatctatggtggatcaaccttaaaagtggtctattgtagaccttattaattttgttaattttaaccattcgatctatttattataaaatgg 1083213  T
Q  354 accgttagatcttc 367  Q
    ||| ||||||||||    
T  1083214 accattagatcttc 1083227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 276
Target Start/End: Original strand, 17459254 - 17459404
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||  |||| ||||||||||    
T  17459254 ttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgc 17459353  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggac 276  Q
    |||||||||  ||||| |||| ||||||  |||   |||||||||||||||    
T  17459354 caaataaattctgacttttaagtttaaccccaaatgatgtctatggtggac 17459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 43034586 - 43034411
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   |||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||  |||| |||||||||     
T  43034586 ttatttgattcaatggtccctcaaataatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgt 43034487  T
Q  229 caaataaatcttgactgttaactttaac--ttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||||||||  ||||||| ||||||   |||||||||||||||||| || | |||| | ||||||| ||||||    
T  43034486 caaataaatcttcgctgttaagtttaacctctcaaatgtctatggtggatcaactttaagagtggtccaccataga 43034411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 276
Target Start/End: Original strand, 28561369 - 28561518
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||  |||| || ||||||     
T  28561369 ttatttgattcaatggtcccttaaataattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttgt 28561468  T
Q  229 caaataaat--cttgactgttaactttaacttcaaatgtctatggtggac 276  Q
    |||||||||   ||||||||||| |||||  |||||| ||||||||||||    
T  28561469 caaataaattctttgactgttaagtttaatctcaaatatctatggtggac 28561518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 11317483 - 11317308
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   |||||||||||| |||||||||||||| ||||||||||||| | ||  |||||||||||||| |||| |||||||||     
T  11317483 ttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttgg 11317384  T
Q  229 caaataaatcttgactgttaactttaacttcaa--atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| | || ||||| |||||||  ||  ||||||||||| ||||| |||||| | ||||| | ||||||    
T  11317383 caaataaatcctcacagttaagtttaactcaaatgatgtctatggtagaccaaccttaagagtggtctaccataga 11317308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 28562924 - 28562716
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   |||||||||||| |||||||||||||| || |||||||||| | ||| |||||||||||||  |||| |||||||||     
T  28562924 ttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgt 28562825  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  ||||||||| |||||   ||||| | |||||||||||| | ||| |  | ||||| ||||||||||  |||||||   ||||||||||    
T  28562824 caaataaatccagactgttaagtttaatcccaaatatatatggtggaccaacattatagatagtccaccatagaccttattaaattttccaattttaacc 28562725  T
Q  329 tttagatct 337  Q
     || |||||    
T  28562724 ctttgatct 28562716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 7437854 - 7437767
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||| |||| |||||||| | |||||||||    
T  7437854 aaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtttacaaaataaatc 7437767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 11547660 - 11547787
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |  | |||||   ||||||  |||| || ||||||     
T  11547660 ttatttgatttattggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgt 11547759  T
Q  229 caaataaatcttgactgttaactttaac 256  Q
    |||||||||| |||||||||| ||||||    
T  11547760 caaataaatcctgactgttaagtttaac 11547787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 302
Target Start/End: Complemental strand, 18617109 - 18616945
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||| ||  |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||      
T  18617109 ttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc 18617010  T
Q  241 gactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
     ||| |||| ||||||  |||   |||||||||||||||||| ||||||| ||||||| ||||||    
T  18617009 aactattaagtttaaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccataga 18616945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 29219398 - 29219562
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||| ||  |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||      
T  29219398 ttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc 29219497  T
Q  241 gactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
     |||||||| ||||||  |||   |||||||||||||||||  ||||||| ||||||| ||||||    
T  29219498 aactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccataga 29219562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 29332697 - 29332861
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||| ||  |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||      
T  29332697 ttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc 29332796  T
Q  241 gactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
     |||||||| ||||||  |||   |||||||||||||||||  ||||||| ||||||| ||||||    
T  29332797 aactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccataga 29332861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 18615542 - 18615746
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  ||||||||||||||||||||||||||||     | |||| |||||  |  |||| ||||||||||||||||||||  ||||||||| |||    
T  18615542 taatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctccgtttgccaaataaatcccgactgttaatttt 18615641  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    || || |||| | |||||||||| | ||||||||  | |||||| ||| ||||          |||||||||||| || ||||||||||| |||||||||    
T  18615642 aattttaaatatttatggtggacgaaccttaaaagcgatccatcgtaggcctta---------ttaattttaaccgtttgatctatttatcataaaaggg 18615732  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  18615733 accgttagatcttc 18615746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 141 - 323
Target Start/End: Original strand, 34512827 - 34513008
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    ||||||| |||| ||||| | |||||||||||||||| || |||||||||| |  | |||||| |||||||| |||  ||||||| | |||||||||| |    
T  34512827 ttggtcccctaattaattaccagttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatcat 34512926  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattt 323  Q
    ||||||||| |||||| |  ||||| ||||||||| || || ||| | ||||||| |||| |||||  ||||||| |||||||    
T  34512927 gactgttaagtttaacct-taatgtatatggtggatcaaccataagagtggtccaccatataccttattaaattttttaattt 34513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 323
Target Start/End: Original strand, 34463981 - 34464164
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct- 239  Q
    ||||||| |||| ||||| | ||||||||||||||| | | |||||||||| |  |  ||||||||| ||| ||||  |||||||   |||||||||||     
T  34463981 ttggtcccctaattaattaccagttttcattttggtttgataattaataaaacaaatcttttggtccatcaggtttgcctccgttaatcaaataaatctc 34464080  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattt 323  Q
    |||||||||| ||||||  ||||||||||| || ||||| |||||| | ||||||| ||||||||||  || |||| |||||||    
T  34464081 tgactgttaagtttaaccccaaatgtctatcgttgaccaaccttaagagtggtccaccatagaccttattagattttttaattt 34464164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 36010578 - 36010681
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||| ||||  |||||||||||| |||||||||||||||| || ||||||||| ||||  |||| ||||||||  |||| || |||||||    
T  36010578 ttatttgatccattagtcccttaaataatttcatgttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttccttcgtttgc 36010677  T
Q  229 caaa 232  Q
    ||||    
T  36010678 caaa 36010681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 36011761 - 36011647
Alignment:
Q  124 taagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccg 223  Q
    |||| ||||||||||||||| |||| |||||||||| |||||| ||||||  || || ||||||||||  ||||||||| ||||||||  ||||  ||||    
T  36011761 taagcttatttgatccattgatcctttaaataattttaagttt-cattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccg 36011663  T
Q  224 tttgccaaataaatct 239  Q
    ||||||||||||||||    
T  36011662 tttgccaaataaatct 36011647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 21664816 - 21664953
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct- 239  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||| |||||   |  ||||| || | |||  |||| |||| ||||  |||||||| |     
T  21664816 ttggtcctttaattaatttcaagttttcattttggtcacacaattcataaaatttctgttttagt-cttcattttttcctccatttgttaaataaatttc 21664914  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  21664915 tgactgttaagtttaacttcaaatgtctatggtggacca 21664953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 29220966 - 29220762
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||||||||||||     | |||| |||||| |  |||| ||| ||||||||||| ||||  ||||||||| |||    
T  29220966 taatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtttgccaaattaatcccgactgttaatttt 29220867  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    || || |||| | |||||||||| | ||||||||  | |||||| ||| ||||          |||||||||||| || ||||||||||| |||||||||    
T  29220866 aattttaaatatttatggtggacgaaccttaaaagcgatccatcgtaggcctta---------ttaattttaaccgtttgatctatttatcataaaaggg 29220776  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  29220775 accgttagatcttc 29220762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 29334265 - 29334061
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||||||||||||     | |||| |||||| |  |||| ||| ||||||||||| ||||  ||||||||| |||    
T  29334265 taatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtttgccaaattaatcccgactgttaatttt 29334166  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    || || |||| | |||||||||| | ||||||||  | |||||| ||| ||||          |||||||||||| || ||||||||||| |||||||||    
T  29334165 aattttaaatatttatggtggacgaaccttaaaagcgatccatcgtaggcctta---------ttaattttaaccgtttgatctatttatcataaaaggg 29334075  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  29334074 accgttagatcttc 29334061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 278
Target Start/End: Original strand, 7436469 - 7436616
Alignment:
Q  130 tatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgcc 229  Q
    ||||||||||| ||||||   ||||||||||||||||| |||||||||  ||||||||||||   ||| ||||||| |||||| ||||  |||||||| |    
T  7436469 tatttgatccaatggtccctcaaataatttcaagtttttattttggtcctacaattaataaaatataccttttggt-cctcaatttttcttccgtttgtc 7436567  T
Q  230 aaataaatcttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    ||||||||| | || ||||| | ||||  ||||||| ||||||| ||||    
T  7436568 aaataaatcctaacagttaagtctaaccccaaatgtatatggtgaacca 7436616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 6030585 - 6030458
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | ||||   ||||||||| |||||||||||||| || |||||||||| ||  |||||||||| ||| |||  |||| |||  |||||    
T  6030585 ttatttgatccaatagtccctcaaataatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatttgc 6030486  T
Q  229 caaataaatcttgactgttaactttaac 256  Q
    |||||||||||  || ||||||||||||    
T  6030485 caaataaatctcaacagttaactttaac 6030458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 364
Target Start/End: Complemental strand, 6032344 - 6032193
Alignment:
Q  214 tttttctccgtttgccaaataaatct-tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaa 312  Q
    |||| ||| ||||||||||||||||  |||| |||||||||||||||||||||||||||| ||||| | | | |  || |||||| ||||||||  |||     
T  6032344 ttttcctctgtttgccaaataaatccatgaccgttaactttaacttcaaatgtctatggttgaccaacataagacatgatccatcgtagaccttattaat 6032245  T
Q  313 tttgttaattttaacctttagatctatttatgataaaagggaccgttagatc 364  Q
    ||  ||||||||| || || ||||| || || ||||| ||||||||||||||    
T  6032244 ttaattaattttagccgtttgatcttttaatcataaaggggaccgttagatc 6032193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 35903521 - 35903651
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    |||||||| ||| |||||||||||||||||||||||| || || |||||||    | ||||||||||||||| | | |||||||  | ||||||||| ||    
T  35903521 ttggtcctttaattaatttcaagttttcattttggtcccataactaataaaagtcatgttttggtccctcaattatatctccgtcagtcaaataaatcct 35903620  T
Q  240 tgactgttaactttaacttcaaatgtctatg 270  Q
    || ||||||| ||||||  ||||||||||||    
T  35903621 tggctgttaagtttaaccccaaatgtctatg 35903651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 42641975 - 42641867
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   |||||||||||| |||| ||||||||| || |||||||||| || || |||||||||| | | ||||| |||||||||    
T  42641975 ttatttgattcaatggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgcaccttttggtccc-ccactttttttccgtttgc 42641877  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  42641876 caaataaatc 42641867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 278
Target Start/End: Complemental strand, 2277562 - 2277434
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaa 249  Q
    |||||||||| |||||||||||||||| || || ||||||| | || ||||||||||||||||||   ||| ||  | ||||||||| | ||   |||||    
T  2277562 aaataatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagttcacctcagtcggtcaaataaatccatgggagttaa 2277463  T
Q  250 ctttaacttcaaatgtctatggtggacca 278  Q
    |||||||  ||||||||||||||||||||    
T  2277462 ctttaaccccaaatgtctatggtggacca 2277434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 32469149 - 32469259
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatc--gtacgttttggtccctcaagtttttctccgttt 226  Q
    ||||||||| || ||||||   |||||||||||||||||||||||| || ||||||||||||| |  |||| ||||||||| |||  |||| ||||| ||    
T  32469149 ttatttgattcaatggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccg-tt 32469247  T
Q  227 gccaaataaatc 238  Q
    ||||||||||||    
T  32469248 gccaaataaatc 32469259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 34468984 - 34469069
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct 239  Q
    |||||||| ||||||||||||||| |||||||||||||    ||||||| ||||||||  ||||  || |||||||||||||||||    
T  34468984 taatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgtttgccaaataaatct 34469069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 6028746 - 6028794
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtc 177  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  6028746 ttatttgatccattggtctcctaaataatttcaaattttcattttggtc 6028794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 278
Target Start/End: Original strand, 34147159 - 34147287
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaa 249  Q
    |||||||||  |||||||||||||||| || || ||||||| |  | ||||||||||||||||||   |||||   | ||||||||| | ||  ||||||    
T  34147159 aaataattttcagttttcattttggtcccataagtaataaaactcatgttttggtccctcaagttcacctccgccagtcaaataaatccatgggtgttaa 34147258  T
Q  250 ctttaacttcaaatgtctatggtggacca 278  Q
    |||||||  ||||||||||||||||||||    
T  34147259 ctttaaccccaaatgtctatggtggacca 34147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 12359773 - 12359647
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgtta 248  Q
    |||||||||||| |||||| |||| ||| |||||||||||||     |||||||||||||||  |||| ||  ||| ||||||||||| | |  ||||||    
T  12359773 taaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttgttcgccaaataaatccgtagctgtta 12359674  T
Q  249 actttaacttcaaatgtctatggtgga 275  Q
    |||||||| | || |||||||||||||    
T  12359673 actttaaccttaagtgtctatggtgga 12359647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 1085476 - 1085394
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||| ||||||||||||||  |||| ||||||||     |||||||||||||||  |||| ||||||||||||||||||||    
T  1085476 taatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctca--ttttcctccgtttgccaaataaatc 1085394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 16295217 - 16295158
Alignment:
Q  243 ctgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||||||| |||||| | |||||||||| |||||| | ||||||| ||||||    
T  16295217 ctgttaactttaactttaaatgtttttggtggaccaaccttaacagtggtccaccataga 16295158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 34467630 - 34467702
Alignment:
Q  251 tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattt 323  Q
    |||||||||||||||||||| ||||| | |||||| | ||||||| |||| |||||  ||| ||| |||||||    
T  34467630 tttaacttcaaatgtctatgatggacaaaccttaagagtggtccaccataaaccttattaagttttttaattt 34467702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 8e-62; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 325300 - 325092
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  325300 ttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtttgc 325201  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||||||||  |||||||||||||||||  ||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| ||||||||||||||||    
T  325200 caaataaatcccgactgttaactttaactctaaatgtctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaattttaacc 325101  T
Q  329 tttagatct 337  Q
     || |||||    
T  325100 gtttgatct 325092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 129 - 367
Target Start/End: Complemental strand, 39605584 - 39605345
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||  |||| ||||||||||    
T  39605584 ttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgc 39605485  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagcctt-aaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    |||||||||| |||| |||||||| ||||| |||||| ||||||||||||  ||| |||| ||||| ||  ||||||||  ||| ||| ||||||||| |    
T  39605484 caaataaatcctgacggttaacttcaactttaaatgtatatggtggaccaatcttaaaaagtggtctatggtagaccttattaattttcttaattttatc 39605385  T
Q  328 ctttagatctatttatgataaaagggaccgttagatcttc 367  Q
    | || ||||||||||| |||||||||||||||||||||||    
T  39605384 cgttcgatctatttatcataaaagggaccgttagatcttc 39605345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 30857801 - 30858030
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||| ||||||||||||| |||| |||||||||| |||  |||| |||| ||||     
T  30857801 ttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttttgt 30857900  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    |||||||||||| || |||||||||||||| ||||||||||| ||||||| |||||||| ||||| |||| |||||         || ||||||||||||    
T  30857901 caaataaatcttaacagttaactttaactttaaatgtctatgatggaccaaccttaaaagtggtctatcagagacc---------ttattaattttaacc 30857991  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||||||||| ||||||||||    
T  30857992 gttcgatctatttatcataaaagggaccattagatcttc 30858030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 30912252 - 30912039
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||||||||||||||||||||||||   | ||||||||||    
T  30912252 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtttgccaaataaatcccaagtgttaacttt 30912153  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||  ||| |||||||||| ||| | |  |||||||||||  ||||||||    
T  30912152 aactccaaatatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaattctaatcatccgatctatttatcttaaaaggg 30912053  T
Q  354 accgttagatcttc 367  Q
    ||| ||||||||||    
T  30912052 accattagatcttc 30912039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 302
Target Start/End: Original strand, 39603854 - 39604030
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||| |||   |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  39603854 ttatttgatccattgatccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgc 39603953  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| |||||||||| ||||||  |||   ||||||||||| ||||| |||||||| || |||| ||||||    
T  39603954 caaataaatcatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccataga 39604030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 22047733 - 22047907
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||  ||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||| ||||||||||    
T  22047733 ttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtttgc 22047832  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcata 300  Q
    |||||||||| || ||||||| |||||||  ||   |||||||||||||| || |||||| | ||||||| ||||    
T  22047833 caaataaatcctggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccata 22047907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 27705409 - 27705256
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||  |||| |||| ||||||||||||||   ||| ||||||    
T  27705409 aaataatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaatacagacagttaac 27705310  T
Q  251 tttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||| | |||   ||||||||||||||||| |||||||| ||||||| ||||||    
T  27705309 tttaa-tccaaatgatgtctatggtggaccaaccttaaaagtggtccaccataga 27705256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 30859287 - 30859111
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| |||| ||||   ||||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||  |||| ||| ||||||    
T  30859287 ttatttgattcattagtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgc 30859188  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||| ||||||| ||||| ||||||  |||   |||||||||||||||||  ||||| | ||||||| ||||||    
T  30859187 caaataagtcttgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccataga 30859111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 22049251 - 22049111
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||  |||| ||| |||||     
T  22049251 ttatttgaaccattagtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttgg 22049152  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctat 269  Q
    ||||||||||    ||||||| ||||||  |||||||||||    
T  22049151 caaataaatccctgctgttaagtttaaccccaaatgtctat 22049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 22308902 - 22308721
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    ||||||| ||||||||||||| ||||||||||||||| || |||||||||| |   |||||| ||||||||  |||| ||||||||||||||||||| |     
T  22308902 ttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgtttgccaaataaatcca 22308803  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaat 321  Q
    ||  |||||| ||||||  |||||||||||||||||||  |||||| | ||||||| ||||||| ||  ||||||| |||||    
T  22308802 tggttgttaagtttaaccccaaatgtctatggtggacctaccttaagagtggtccaccatagacattattaaattttttaat 22308721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 8521268 - 8521429
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||  ||| |||||||||||||||||||||||| || || ||||||| |  | |||||||||||||| |||| |||||||  | ||||||||||      
T  8521268 ttggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatccc 8521367  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||| ||||||||||||  ||||||| |||||||||||| |||||| | ||||||| ||||||    
T  8521368 gacggttaactttaaccccaaatgtgtatggtggaccaaccttaagaatggtccaccataga 8521429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 1010467 - 1010314
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||  ||| |||||||||||||| ||||||||| || || ||||||| |  | |||||||||||||| |||| |||||||  | ||||||||||      
T  1010467 ttggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatccc 1010368  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtcc 294  Q
    ||| ||||||||||||  ||||||| |||||||||||| |||||| | ||||||    
T  1010367 gacggttaactttaaccccaaatgtgtatggtggaccaaccttaagagtggtcc 1010314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 30910767 - 30910918
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||| |||| |||||||||||| |||||||||||||    
T  30910767 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgtttaccaaataaatctcgactgttaacttt 30910866  T
Q  254 aacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  |||   |||||| |||||||||| |||||| | ||||||| ||||||    
T  30910867 aacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccataga 30910918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 367
Target Start/End: Complemental strand, 11263811 - 11263576
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||  |||| | ||||||||||||| || |||| |||||||||  | ||| |||||| ||||  |||| || | |||  |||||||||||||      
T  11263811 ttatttgatttattgattctctaaataattttaaatttttattttggtcctataatcaataaaacgtattttttagttcttcatatttttctccgtttat 11263712  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaa-c 327  Q
    |||||||||  |||| ||||| |||||||||||||||||||  || ||||  ||||||| || ||||||||| |||||  ||| |||||||||||||| |    
T  11263711 caaataaattgtgacagttaa-tttaacttcaaatgtctataatgaaccaaacttaaaaatgatccatcataaaccttattaattttgttaattttaatc 11263613  T
Q  328 ctttagatctatttatgataaaagggaccgttagatcttc 367  Q
    ||||| || || |||| |||||| ||||||||||||||||    
T  11263612 cttta-at-tagttatcataaaa-ggaccgttagatcttc 11263576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 337
Target Start/End: Complemental strand, 33174050 - 33173865
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttgactgttaactt 252  Q
    |||||||| |||||||||||| || |||| ||||||||     |||||| ||||||||  |||| ||| |||||||||||||||| ||| ||||||| ||    
T  33174050 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttggctgttaagtt 33173951  T
Q  253 taacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt--aattttaacctttagatct 337  Q
    ||||  |||||||||||||||||||| |||||| | ||||| | |||||| |||||| ||||| ||  |||||||||| || |||||    
T  33173950 taaccccaaatgtctatggtggaccaaccttaagagtggtctaccataga-cttcattaatttttttaaattttaaccgtttgatct 33173865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 8523849 - 8523734
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    ||||||| |||| |||||||||||||||||||||||| || || ||||||| |  | |||||| ||| ||| |||| |||||||  | |||||||||| |    
T  8523849 ttggtcccctaattaatttcaagttttcattttggtcccataactaataaaactcatgttttgatccttcatgtttgtctccgtcagtcaaataaatcct 8523750  T
Q  241 gactgttaactttaac 256  Q
    ||| ||||||||||||    
T  8523749 gacagttaactttaac 8523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 278
Target Start/End: Original strand, 32757848 - 32757976
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-cttgactgttaa 249  Q
    |||||||||| |||||||||||||||| || || ||||||| |  | ||||||||||||||||||   |||||   | ||||||||| | ||  ||||||    
T  32757848 aaataatttccagttttcattttggtcccataaataataaaactcatgttttggtccctcaagttcacctccgccggtcaaataaatccatgggtgttaa 32757947  T
Q  250 ctttaacttcaaatgtctatggtggacca 278  Q
    |||||||  ||||||||||||||||||||    
T  32757948 ctttaaccccaaatgtctatggtggacca 32757976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 11262257 - 11262319
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    |||||| |||||||||| | ||||||||||| ||||||||||||| ||| |||||||||||||    
T  11262257 ttattttatccattggttccctaaataattttaagttttcattttagtcccacaattaataaa 11262319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 41798062 - 41798004
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaa 187  Q
    |||||||||||||||||||   ||||||||||||||||| ||||||||| |||||||||    
T  41798062 ttatttgatccattggtccctcaaataatttcaagtttttattttggtcccacaattaa 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 34894150 - 34894259
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| |||||||||||||  ||| ||||||| | |||||||||||||| |  || |||||||  |||| ||||||||||| |  ||| |||||||||||    
T  34894150 ttattagatccattggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaagtaccttttggtcccttagttttgtctccgtttgc 34894249  T
Q  229 caaataaatc 238  Q
    |||| |||||    
T  34894250 caaaaaaatc 34894259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 15548241 - 15548365
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||  || || ||||||||||    ||  ||| ||||||| | |||| ||||||||||    
T  15548241 ttatttgatccattggtcccctaaataatttcaaatttt--tttttatcccataattaataaaattcactatttagtccctc-atttttcctccgtttgc 15548337  T
Q  229 caaataaatcttgactgttaactttaac 256  Q
    |||||||||| || ||||||| ||||||    
T  15548338 caaataaatcctgcctgttaagtttaac 15548365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 24503191 - 24503294
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||||||||||||  ||| ||||| | | |||||||||||||| || || ||||||| ||||| ||||||||||| |  ||| |||| |||||||||| |    
T  24503191 gatccattggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaa 24503290  T
Q  235 aatc 238  Q
    ||||    
T  24503291 aatc 24503294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 34899066 - 34898963
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| |||||||||||||  ||| ||||||  | |||||||||||||| || || |||||||  |||| ||||||||||| |  ||| |||||||||||    
T  34899066 ttattagatccattggtcccttaattaattttcatttttcattttggtcccataagtaataaaaagtacattttggtcccttagttttgtctccgtttgc 34898967  T
Q  229 caaa 232  Q
    ||||    
T  34898966 caaa 34898963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 1102731 - 1102793
Alignment:
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||||||||  |||||||||||||| ||||| |||||| | ||||||| ||||||    
T  1102731 tgactgttaactttaaccccaaatgtctatggtagaccaaccttaagagtggtccaccataga 1102793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 15941275 - 15941380
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||  |||||| | |||||||| |||||||||||||| |  || |||||||||| |||||  ||||||||||||  ||||  ||||||||     
T  15941275 ttatttgatccaacggtcct-tcaataattttaagttttcattttgattccataattaataaaacgtaccatttggtccctcactttttcttccgtttgt 15941373  T
Q  229 caaataa 235  Q
    |||||||    
T  15941374 caaataa 15941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 324153 - 324218
Alignment:
Q  242 actgttaacttt-aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    |||||||||||| ||||  ||||||||||||||||||| | |||| | ||||||||||||||||||    
T  324153 actgttaacttttaactctaaatgtctatggtggaccaactttaatagtggtccatcatagacctt 324218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 22307521 - 22307618
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    ||||||| ||||| ||||||| ||||||||||||||  || |||||||||| |    ||||| ||||||||  |||| ||| ||||||||||||||||    
T  22307521 ttggtcccctaaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctctgtttgccaaataaatc 22307618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 35081435 - 35081355
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaatttta 325  Q
    |||||||||||| |||||||||||| ||||| || |||||| | | ||||| |||| ||||| |||| ||| |||||||||    
T  35081435 gttaactttaacctcaaatgtctatagtggatcaaccttaagagttgtccaccataaaccttaataatttttttaatttta 35081355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 26047826 - 26047897
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaa 212  Q
    |||||||||||| ||||||||| |||| |||||||||||| || ||||||| |  | ||||| |||||||||    
T  26047826 ttggtcctctaattaatttcaaatttttattttggtctcataactaataaaactcatgttttagtccctcaa 26047897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 1009205 - 1009360
Alignment:
Q  149 ctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgtta 248  Q
    |||| |||||||||||||||||||||||  || || ||||||| |  | |||||||| | ||| |||| ||||| |  | ||||||||||||||  ||||    
T  1009205 ctaattaatttcaagttttcattttggttccataactaataaaactcatgttttggttcttcatgtttgtctccatcagtcaaataaatcttgatagtta 1009304  T
Q  249 actttaacttc---aaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||| ||  |   |||||| |||||||||||| |||||| | ||||||| ||||||    
T  1009305 acttttaccccccaaaatgt-tatggtggaccaaccttaagagtggtccaccataga 1009360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 9220459 - 9220425
Alignment:
Q  244 tgttaactttaacttcaaatgtctatggtggacca 278  Q
    ||||||||||||| |||||||||||||||||||||    
T  9220459 tgttaactttaacctcaaatgtctatggtggacca 9220425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 20538066 - 20538116
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    ||||||| |||| ||||||||| |||||||||||||| || ||||||||||    
T  20538066 ttggtcccctaattaatttcaaattttcattttggtcccataattaataaa 20538116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 24509116 - 24509042
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||||||||| || || ||||||| ||||| ||||||||||| |  ||| |||| |||||||||| |||||    
T  24509116 ttttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatc 24509042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 116; Significance: 8e-59; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 132 - 367
Target Start/End: Original strand, 52596 - 52831
Alignment:
Q  132 tttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaa 231  Q
    |||||| || ||||||||||| ||||||||||||||||||||| || |||||||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  52596 tttgattcaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaa 52695  T
Q  232 ataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaaccttt 331  Q
    |||||||  ||| |||||||||||||| |||||| |||||||||||| |||||||| ||||| ||  ||||||||  ||| ||| ||||||||| || ||    
T  52696 ataaatcccgacagttaactttaactttaaatgtatatggtggaccaaccttaaaaatggtctatggtagaccttattaattttcttaattttatccgtt 52795  T
Q  332 agatctatttatgataaaagggaccgttagatcttc 367  Q
     ||||||||||| | ||||||||  |||||||||||    
T  52796 cgatctatttatcacaaaagggattgttagatcttc 52831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 54300 - 54124
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||| |||| ||||||||||    
T  54300 ttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgtttgc 54201  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| |||||||||| | ||||  |||   ||||||||||||||||| |||||||| ||||||| ||||||    
T  54200 caaataaatcgtgactgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccataga 54124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 367
Target Start/End: Complemental strand, 109860 - 109622
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||  ||||||||||||||||||||||||||||  |||||||||||| ||||| |||| ||||||||  ||||||||  |||||    
T  109860 ttatttgattcaatggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatttgc 109761  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    ||||| ||||   ||| |||||||||||||||||||| |||||||||||| |||||||| | ||||||| ||||||||  ||| ||||||||||||||||    
T  109760 caaatgaatcccaactattaactttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttgttaattttaacc 109661  T
Q  329 tttagatctatttatgataaaagggaccgttagatcttc 367  Q
     || ||||||||||| |||||| | ||||||||||||||    
T  109660 atttgatctatttatcataaaatgaaccgttagatcttc 109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 302
Target Start/End: Original strand, 108514 - 108689
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| || ||||||| | |||| ||||||| | ||| ||||||| || || |||||||||| ||||||||||| |||||||  |||| |||| |||||    
T  108514 ttatttaattcattggttccctaattaatttccattttacattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgc 108613  T
Q  229 caaataaatcttgactgttaactttaacttcaaat--gtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| |  | ||||| ||||||  |||||     |||||||||||| |||||||| ||||||| ||||||    
T  108614 caaataaatccttgcagttaagtttaaccccaaataatattatggtggaccaaccttaaaagtggtccaccataga 108689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 141 - 367
Target Start/End: Original strand, 16963847 - 16964073
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||| | ||| |||||||| ||||||||||||||| |||||||||||||      ||||| ||||||||  |||| |||||||||||||||||||  |    
T  16963847 ttggtcttttaattaatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaatgct 16963946  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatt 340  Q
    |||||||||||||||||  |||||| |||| ||||||| |||||||| ||||||||||||||||||  ||| |||||||||||||||| || ||||||||    
T  16963947 gactgttaactttaactctaaatgtttatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaattttaacccttcgatctatt 16964046  T
Q  341 tatgataaaagggaccgttagatcttc 367  Q
    ||| |||||||||||| ||||||||||    
T  16964047 tatcataaaagggaccattagatcttc 16964073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 295
Target Start/End: Complemental strand, 15072914 - 15072738
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttc 219  Q
    |||||| | ||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |  |||| |    
T  15072914 aaaataggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcc 15072815  T
Q  220 tccgtttgccaaataaat-cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtcca 295  Q
    |||||||||||||||||| | || |||||||||||||| ||||||||||||||||||||| ||| || | |||||||    
T  15072814 tccgtttgccaaataaatccatgtctgttaactttaacctcaaatgtctatggtggaccaacctaaagagtggtcca 15072738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 183 - 337
Target Start/End: Original strand, 46110337 - 46110491
Alignment:
Q  183 attaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagcct 282  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||  |||| |||||||||||||| |||    
T  46110337 attaataaaacgtactttttggtcactcaagtttttctccgtttgctaaataaatctcgactgttaactttaactctaaatatctatggtggaccaacct 46110436  T
Q  283 taaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
    ||| | ||||||||| ||||||||  ||| |||||||||||||||| || |||||    
T  46110437 taagagtggtccatcgtagaccttattaattttgttaattttaaccgtttgatct 46110491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 303
Target Start/End: Original strand, 23091352 - 23091528
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| |||||||| |||| ||||||||  ||||||||||||| | |||||||||||| |||||||||||||| ||||  |||||||||||||||    
T  23091352 ttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgtttgc 23091451  T
Q  229 caaataaat--cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagac 303  Q
    |||||||||  || | ||||||| |||||  ||||||||||||||||||||| | |||||| ||||||| |||||||    
T  23091452 caaataaatccctagtctgttaagtttaatctcaaatgtctatggtggaccaactttaaaagtggtccaccatagac 23091528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 151 - 328
Target Start/End: Original strand, 27814315 - 27814493
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    ||||||||||||||||||||||| |||  | |||||||||| ||||| |||||||||||||  |||| ||| ||||||||||||||||  ||| ||||||    
T  27814315 aaataatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcctctgtttgccaaataaatcccgacggttaac 27814414  T
Q  251 -tttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
     |||||||  ||||||||||||||||||| | |||||| ||||||||| || |||||  ||| ||||||||||||||||    
T  27814415 ttttaactctaaatgtctatggtggaccaactttaaaagtggtccatcgtaaaccttattaattttgttaattttaacc 27814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 15234131 - 15233919
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||  |||||||| ||||    
T  15234131 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcccgactgtta-cttt 15234033  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||||||  | |||||  ||| | | ||||||||| |||||| |  ||  |||||||||||||||| || ||||||||||| |||||||||    
T  15234032 aacttcaaatgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaattttaaccattcgatctatttatcataaaaggg 15233933  T
Q  354 accgttagatcttc 367  Q
    ||| ||| ||||||    
T  15233932 accattatatcttc 15233919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 141 - 278
Target Start/End: Complemental strand, 24499758 - 24499621
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||  |||| |||||||| |||||||||||      
T  24499758 ttggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaatccg 24499659  T
Q  241 gactgttaactttaacttcaaatgtctatggtggacca 278  Q
    | |||| ||||||||  |||||||||||| ||||||||    
T  24499658 gtctgtcaactttaaactcaaatgtctattgtggacca 24499621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 49802985 - 49802777
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||    ||||||| ||||||||  |||||||||||||||||||||||||  ||| ||||||||     
T  49802985 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtttgccaaataaatcccgacggttaacttc 49802886  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||  |||||||||||||| |||| |||||||| ||||| ||| |||||||   ||| |||||| |||| |||  || |||||| |||| |||||||||    
T  49802885 aactctaaatgtctatggtgtaccaaccttaaaagtggtctatcgtagacctcattaattttgtttatttcaactattcgatctacttat-ataaaaggg 49802787  T
Q  354 accgttagat 363  Q
    || |||||||    
T  49802786 actgttagat 49802777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 14470857 - 14471029
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||  ||||||||  |||| || |||||||    
T  14470857 ttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtttgc 14470956  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcata 300  Q
    ||||||||| |||   |||||| ||||||  |||| |||||| |||||||| |||||| | ||||||| ||||    
T  14470957 caaataaatccttcggtgttaagtttaaccccaaacgtctatagtggaccaaccttaagagtggtccaccata 14471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 45585124 - 45584998
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||  |||| ||||||||||    
T  45585124 ttatttgatccaatagtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgc 45585025  T
Q  229 caaataaatcttgactgttaactttaa 255  Q
    |||||||||| |||| ||||| |||||    
T  45585024 caaataaatcctgaccgttaagtttaa 45584998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 15071343 - 15071452
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| || |||||||||| |||| ||||||||||||||  |||| |||||||| |    
T  15071343 ttatttaatccattggtcccctaaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtttac 15071442  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  15071443 caaataaatc 15071452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 50444813 - 50444605
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||   |||||||||||| |||||||||| ||| ||||||||||||| ||||| |||||||||||||  |||| ||||| ||||    
T  50444813 ttatttgattcaatggtccctcaaataatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgc 50444714  T
Q  229 caaataaatcttgactgttaactttaacttc-aaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    ||||||||||   || ||||||||||||| | ||| ||||||| ||||||| |||||| | | ||||||| ||||||||  ||| |||||| ||||||||    
T  50444713 caaataaatccaaaccgttaactttaactccaaaacgtctatgttggaccaaccttaagagt-gtccatcgtagaccttattaattttgttcattttaac 50444615  T
Q  328 ctttagatct 337  Q
    | || |||||    
T  50444614 cgtttgatct 50444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 278
Target Start/End: Complemental strand, 52628988 - 52628839
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| || |||||  |||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||  |||| ||||||||||    
T  52628988 ttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgc 52628889  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||||||||||  || ||||| ||||||  ||||| | || |||||||||    
T  52628888 caaataaatctcaaccgttaagtttaaccccaaatatgtaaggtggacca 52628839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 328
Target Start/End: Complemental strand, 14477906 - 14477706
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| ||||||  |||||||||| ||||||||| |||| || ||||||||||||| |||||||||  ||||||||  |||||||||||||||    
T  14477906 ttatttgatccaatggtcccataaataattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtttgc 14477807  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt-aattttaa 326  Q
    ||||||||| |||   |||||| |||||||  ||||||||||||| || ||  ||||| | | ||||| |||||| |||||| ||||| || ||||||||    
T  14477806 caaataaatccttcgatgttaagtttaactctaaatgtctatggtagatcaatcttaagagttgtccaccataga-cttcattaattttttaaattttaa 14477708  T
Q  327 cc 328  Q
    ||    
T  14477707 cc 14477706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 278
Target Start/End: Original strand, 44276124 - 44276272
Alignment:
Q  130 tatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgcc 229  Q
    ||||| |||||||||| | |||| ||||||| | ||||||||||||||||| |||||||||| ||||||||||| ||| |||  |||||||| ||||| |    
T  44276124 tatttaatccattggttccctaattaatttccatttttcattttggtctcataattaataaaacgtacgttttgatccttcacttttttctctgtttgtc 44276223  T
Q  230 aaataaatcttgactgttaactttaacttcaaatgtctatggtggacca 278  Q
    || |||||| |||||||||| ||||||  ||||||  ||||||||||||    
T  44276224 aattaaatcctgactgttaagtttaaccacaaatgcgtatggtggacca 44276272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 46111603 - 46111479
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| || ||||||  |||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||| |||||  |||| || |||||||    
T  46111603 ttatttgattcaatggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgc 46111504  T
Q  229 caaataaatcttgactgttaacttt 253  Q
    ||||||||||  |||||||||||||    
T  46111503 caaataaatcccgactgttaacttt 46111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 306
Target Start/End: Original strand, 16123288 - 16123466
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||||  |||||||||||||    ||||||| ||||||||  ||||  |||||||||    
T  16123288 ttatttgattcattgatcctctaaataatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgc 16123387  T
Q  229 caaataaat-cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    ||||||||| | ||  |||||| |||||  ||||||||||||||| ||||| | |||||| || |||| |||| |||||    
T  16123388 caaataaatccctggttgttaagtttaatctcaaatgtctatggtagaccaactttaaaagtgatccaccatatacctt 16123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 44278444 - 44278359
Alignment:
Q  149 ctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  44278444 ctaattaatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaata 44278359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 35943541 - 35943375
Alignment:
Q  150 taaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat--cttgactgtt 247  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| ||||| ||||||| |||||  |||| || ||||||||||||||||  | || |||||    
T  35943541 taaataatttcaaatttttattttggtcccacaattaataaaacgtacattttggt-cctcactttttccttcgtttgccaaataaatcccctggctgtt 35943443  T
Q  248 aactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaattt 315  Q
    || ||||||   ||||||||||||||||||| |||||| | || |||| ||||||||||  |||||||    
T  35943442 aagtttaaccctaaatgtctatggtggaccaaccttaagagtgatccaccatagaccttattaaattt 35943375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 41874086 - 41873877
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||| |||||||||||||   || ||||||| | ||||||| ||||||||| ||||||||||  |||  |||||| || | |  |||| |||||||| |    
T  41874086 ttattagatccattggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagcttttcctccgtttac 41873987  T
Q  229 caaataaatc-ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt-aattttaa 326  Q
    |||||||||| |||  |||||| ||||||  |||||||||||||||||||| |||||| | ||||||| |||||| |||||| ||||| || ||||||||    
T  41873986 caaataaatccttggttgttaagtttaaccacaaatgtctatggtggaccaaccttaagagtggtccaccataga-cttcattaattttttaaattttaa 41873888  T
Q  327 cctttagatct 337  Q
    || || |||||    
T  41873887 ccgtttgatct 41873877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 141 - 341
Target Start/End: Complemental strand, 15746869 - 15746669
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    ||||||| |||| ||||||| | |||||||||||||| || || ||||||| |  | |||||||||||| || | | |||||||  | |||||||||| |    
T  15746869 ttggtcccctaattaatttccaattttcattttggtcccataagtaataaaactcatgttttggtcccttaattgtatctccgtcagtcaaataaatcat 15746770  T
Q  241 g-actgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctat 339  Q
      |||||||| ||||||||||||||||||||||||||||  ||||| | ||||||| |||||| | | || ||| | |||||||||||| || |||||||    
T  15746769 ccactgttaagtttaacttcaaatgtctatggtggaccaatcttaagagtggtccaccatagatcct-attaatcttttaattttaaccctttgatctat 15746671  T
Q  340 tt 341  Q
    ||    
T  15746670 tt 15746669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 328
Target Start/End: Original strand, 41872577 - 41872777
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||| | ||||||  | | ||||||||| ||||||||||| ||  |||||||||||| |||||||||  ||| ||||  |||| ||||||||||    
T  41872577 ttatttgatctaatggtcccttgattaatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgtttgc 41872676  T
Q  229 caaataaatcttgactgttaactttaa-cttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaac 327  Q
    |||||||||| |   |||||| ||||| |  ||||||||||||||| ||||  ||||| ||| || || ||||||||||  ||||||| ||||||| |||    
T  41872677 caaataaatcattggtgttaagtttaacccccaaatgtctatggtgaaccaatcttaagattagttcaccatagaccttattaaattttttaatttaaac 41872776  T
Q  328 c 328  Q
    |    
T  41872777 c 41872777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 50442647 - 50442753
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttgactgttaa 249  Q
    ||||||||| | ||||| ||||||||||||||||||||||| ||||| ||||| | |||||  |||| ||| ||||| |||||||||| |||||||||||    
T  50442647 aaataattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaaataaatctttgactgttaa 50442746  T
Q  250 ctttaac 256  Q
    |||||||    
T  50442747 ctttaac 50442753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 276
Target Start/End: Complemental strand, 51042445 - 51042310
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaa-tct 239  Q
    |||||||  ||| ||||||| | |||||||||||||| ||||||||||||| |  ||||||| |||||||   ||||||||||||||||||||||| ||     
T  51042445 ttggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaattca 51042347  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggac 276  Q
    |||| ||||| | |||| ||||||||||||| |||||    
T  51042346 tgaccgttaagtataacctcaaatgtctatgatggac 51042310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 34352071 - 34351968
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| | ||||  |||||||||| ||||||||||||||||| |||||||||||||  |||| |||||||||||||  |||| || ||||||     
T  34352071 ttatttgatccaatagtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgtttgt 34351972  T
Q  229 caaa 232  Q
    ||||    
T  34351971 caaa 34351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 52627516 - 52627625
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaat-aaatcgtacgttttggtccctcaagtttttctccgtttg 227  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||||| |||||||||| ||| | ||| |||||| || | || |||| |||||||||    
T  52627516 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaaacatacattttggacctttaatttttcctccgtttg 52627615  T
Q  228 ccaaataaat 237  Q
    ||||| ||||    
T  52627616 ccaaaaaaat 52627625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 46467158 - 46467306
Alignment:
Q  140 attggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-c 238  Q
    |||| |||| ||| |||||||||||||||||||||||| || || ||||||| |  | |||| ||||||||| ||||  ||||||||| ||||||||| |    
T  46467158 attgatcctttaattaatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatcc 46467257  T
Q  239 ttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaa 287  Q
     |  ||||||| ||||||   ||||||||||||||||||| | ||||||    
T  46467258 ctcgctgttaagtttaaccataaatgtctatggtggaccaacattaaaa 46467306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 15232778 - 15232928
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| || ||||||||||     |||||| ||||||||  |||| ||| |||||||||||||||| |||| ||||| |||    
T  15232778 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatcatgaccgttaagttt 15232877  T
Q  254 aacttcaa--atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||   ||  |||| ||| |||||||| | |||||| ||||||||||||||    
T  15232878 aacccaaatgatgtatatagtggaccaactttaaaagtggtccatcataga 15232928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 48097131 - 48096973
Alignment:
Q  144 gtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgac 243  Q
    ||||||||| ||||||| | |||| ||||||||| || || ||||||| |  | ||||| |||||| | |||| |||||||  | ||||||||||   ||    
T  48097131 gtcctctaattaatttccaatttttattttggtcccataactaataaaactcatgttttagtcccttaggtttgtctccgtcggtcaaataaatccctac 48097032  T
Q  244 tgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||| |||||| |||||||| |||||||||||| |||||| | ||||| | ||||||    
T  48097031 tgttaagtttaacctcaaatgtatatggtggaccaaccttaagagtggtctaccataga 48096973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 328
Target Start/End: Complemental strand, 30535751 - 30535585
Alignment:
Q  162 agttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttga-ctgttaactttaacttca 260  Q
    |||||||||||||||  || |||||||||| |  ||||||| || |||||| | |  ||||||||| ||||||||||   | || ||||||||| |||||    
T  30535751 agttttcattttggttccataattaataaaaccaacgttttagttcctcaaatctaactccgtttgtcaaataaatccacatctattaactttagcttca 30535652  T
Q  261 aatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacc 328  Q
    |||||||||||||||||| | ||| |  | ||||| |||||||||| ||  |||| ||||||||||||    
T  30535651 aatgtctatggtggaccaacattatagatagtccaccatagacctt-atttattttttaattttaacc 30535585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 46318720 - 46318585
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    |||||||| ||| |||||||||||||| ||||| ||| || || |||||||    | ||||||||||||||| | | ||||||| || ||||||||| ||    
T  46318720 ttggtcctttaattaatttcaagttttgatttttgtcccataactaataaaagtcatgttttggtccctcaattgtatctccgtctgtcaaataaatcct 46318621  T
Q  240 tgactgttaactttaacttcaaatgtctatggtgga 275  Q
    || ||||||| ||||||  |||||||||||| ||||    
T  46318620 tggctgttaagtttaaccccaaatgtctatgatgga 46318585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 35942238 - 35942286
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtc 177  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  35942238 ttatttgattcattggtcctctaaataatttcaaatttttattttggtc 35942286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 49801653 - 49801752
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaat 263  Q
    |||||||||||||| |||||||||||||      |||||| ||||||| |||| |||| ||||||||||||||||  ||||||||| |||||| ||||||    
T  49801653 ttttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatc-cgactgttaattttaacctcaaat 49801751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 33369310 - 33369248
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    |||||||||||| |||||  |||| ||||||||||| |||||||||||| || ||||||||||    
T  33369310 ttatttgatccaatggtctcctaattaatttcaagtattcattttggtcccataattaataaa 33369248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 3617502 - 3617445
Alignment:
Q  238 cttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtcca 295  Q
    |||| |||||||||||||| |||||||||||||||| |||| |||||| | |||||||    
T  3617502 cttggctgttaactttaacctcaaatgtctatggtgaaccaaccttaagagtggtcca 3617445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 9226213 - 9226156
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||| |||||| |||||||||||||||||| || |||||||| ||||||| ||||||    
T  9226213 gttaaatttaacctcaaatgtctatggtggatcaaccttaaaagtggtccaccataga 9226156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 18821842 - 18821697
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct- 239  Q
    |||||||||||| ||| ||  ||||||||||||| |||||||| |  ||||    |||||| ||||||||||  ||| | ||||| |||||||  |||      
T  18821842 ttggtcctctaattaactttcagttttcattttgatctcacaactcgtaaaatcaacgtttcggtccctcaacgtttgcaccgttagccaaattgatcca 18821743  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaa 285  Q
    | || |||| ||||||||||||||||||||||||||| | ||||||    
T  18821742 taaccgttatctttaacttcaaatgtctatggtggactaaccttaa 18821697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 836306 - 836246
Alignment:
Q  131 atttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    ||||| || ||||||||||||| ||||||  ||||||||||||||||||| || |||||||    
T  836306 atttggtctattggtcctctaattaattttcagttttcattttggtctcataactaataaa 836246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 835249 - 835308
Alignment:
Q  132 tttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaa 191  Q
    |||| ||||||||||| |||| ||||||  ||||||||||||||||||| || |||||||    
T  835249 tttggtccattggtcccctaattaatttgcagttttcattttggtctcataactaataaa 835308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 16757524 - 16757461
Alignment:
Q  243 ctgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    ||||||||||||||  |||||||||| | ||||||| | ||| || ||||||||||||||||||    
T  16757524 ctgttaactttaaccacaaatgtctaagatggaccaacattataagtggtccatcatagacctt 16757461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 42244644 - 42244727
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgt 224  Q
    |||||||| ||| ||||||||| ||||||||||| || || |||||||||| |  | |||||||||||| |||||  |||||||    
T  42244644 ttggtcctttaattaatttcaaattttcattttgatcccataattaataaaactcatgttttggtcccttaagttgatctccgt 42244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 10376695 - 10376574
Alignment:
Q  156 atttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaa 255  Q
    |||||||||||||| |||| ||||| |||||||||| | || |||||||||| | || |||  ||| || || |||| |||||||| ||  ||| |||||    
T  10376695 atttcaagttttca-tttgatctcataattaataaaacttatgttttggtccataaattttccctctgtctgtcaaaaaaatcttgtcttctaagtttaa 10376597  T
Q  256 cttcaaatgtctatggtggacca 278  Q
    || ||||||| |||||| |||||    
T  10376596 ctgcaaatgtatatggtagacca 10376574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 10722374 - 10722284
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagat 335  Q
    |||||||||||| |||||| |||||| ||||||| ||| || | ||||||||||||||   |  ||| ||| ||||||| |||||||||||    
T  10722374 gttaactttaacctcaaatatctatgatggaccaacctaaagagtggtccatcatagattctactaatttttttaatttaaacctttagat 10722284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 22766777 - 22766735
Alignment:
Q  289 tggtccatcatagaccttcataaatttgttaattttaaccttt 331  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||    
T  22766777 tggtccaccatggaccttcataaattttttaattttaaccttt 22766735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 48527651 - 48527709
Alignment:
Q  244 tgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||||| |||||||||||||| ||||| | |||| | ||||||| ||||||    
T  48527651 tgttaactttaactccaaatgtctatggtcgaccaactttaagagtggtccaccataga 48527709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 275
Target Start/End: Complemental strand, 836205 - 836176
Alignment:
Q  246 ttaactttaacttcaaatgtctatggtgga 275  Q
    ||||||||||||||||||||||||||||||    
T  836205 ttaactttaacttcaaatgtctatggtgga 836176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 269
Target Start/End: Original strand, 15743289 - 15743418
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    |||||||||||| ||||||| | |||| |||||||||||| || ||||||| |  | ||||||||||||  | | | ||||| |  | ||||||||| ||    
T  15743289 ttggtcctctaattaatttccaatttttattttggtctcataagtaataaaactcatgttttggtcccttgattgtatctccatcagtcaaataaatcct 15743388  T
Q  240 tgactgttaactttaacttcaaatgtctat 269  Q
    |  | ||||| |||||||||||||||||||    
T  15743389 tccccgttaagtttaacttcaaatgtctat 15743418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 44999492 - 44999427
Alignment:
Q  214 tttttctccgtttgccaaataaatcttga-ctgttaactttaacttcaaatgtctatggtggacca 278  Q
    |||| ||| ||||||||||||||||   | |||||||||||||| | |||||||||||||||||||    
T  44999492 ttttcctctgtttgccaaataaatccctagctgttaactttaaccttaaatgtctatggtggacca 44999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 12665909 - 12666000
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
    |||||||||||| |||||||| ||||||| ||||  ||||| | ||||||| |||||| |||  ||| ||||||||||| |||| || |||||    
T  12665909 gttaactttaacctcaaatgtttatggtgaacca-tcttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgatct 12666000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 120 - 297
Target Start/End: Original strand, 7310268 - 7310445
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttc 219  Q
    ||||| || ||||||||||||| |||||| |||||||||| ||||||||||||||||| || |||||||||| |||| ||||  |||| ||| |||||||    
T  7310268 aaaattagcttatttgatccatcggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttc 7310367  T
Q  220 tccgtttgccaaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatc 297  Q
    ||||||| |||||||||||| | ||||||| ||||||| ||||||||||||||| |||| |||||||| |||||||||    
T  7310368 tccgtttaccaaataaatctcggctgttaagtttaactccaaatgtctatggtgaaccaaccttaaaaatggtccatc 7310445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 367
Target Start/End: Complemental strand, 23397444 - 23397231
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||  ||| ||||| |||    
T  23397444 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaaattt 23397345  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||||||||||||||| |||||||| | ||||| | || |||||  ||| |||||||||||||||| |  ||||||||||| |||||| ||    
T  23397344 aacttcaaatgtctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaattttaaccatccgatctatttatcataaaatgg 23397245  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  23397244 accgttagatcttc 23397231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 367
Target Start/End: Original strand, 29380217 - 29380430
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| ||||||||| |||     |||||| ||||||||  ||||  |||||||||||||||||||  ||| ||||| |||    
T  29380217 taatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtttgccaaataaatcccgaccgttaatttt 29380316  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    |||||||||||| ||||||||| || |||||||| | ||||||| ||||||||  ||| |||||||||||||||| || ||||||||||| |||||||||    
T  29380317 aacttcaaatgtatatggtggatcaaccttaaaagtagtccatcgtagaccttattaattttgttaattttaaccattcgatctatttatcataaaaggg 29380416  T
Q  354 accgttagatcttc 367  Q
    ||||||||||||||    
T  29380417 accgttagatcttc 29380430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 154 - 364
Target Start/End: Complemental strand, 17839229 - 17839019
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| |||||||||||||     |||||| ||||||||  |||| ||||||||||||||||||||  ||| ||||| |||    
T  17839229 taatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaatttt 17839130  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaaggg 353  Q
    ||||||||||||  ||||||||  | |||||||| | ||||||  ||||||||  ||| |||||||||||||||| || ||||||||||| |||||||||    
T  17839129 aacttcaaatgtagatggtggattaaccttaaaagtagtccattgtagaccttattaattttgttaattttaaccattcgatctatttatcataaaaggg 17839030  T
Q  354 accgttagatc 364  Q
    |||||||||||    
T  17839029 accgttagatc 17839019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 6452626 - 6452517
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||||||  ||||||||  |||| ||||||||||    
T  6452626 ttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtttgc 6452527  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  6452526 caaataaatc 6452517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 12669736 - 12669898
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatct- 239  Q
    ||||| ||||||||||| | || |||| ||||||||||||||||||||||| |  | ||||| |||| |||  |||| |||||||||| ||||||||||     
T  12669736 ttggtactctaaataatattaaatttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctc 12669835  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    | ||||||||||||||| |||||||| |||||||||||| |||||| | ||||||| ||||||    
T  12669836 taactgttaactttaacctcaaatgtgtatggtggaccaaccttaagagtggtccaccataga 12669898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 5186594 - 5186745
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| |||||||||||||    |||||||  ||| |||  |||| ||||||||||||||||||||  ||| |||||||||    
T  5186594 taatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccgtttgccaaataaatcccgaccgttaacttt 5186693  T
Q  254 aacttcaaatgtctatggtggaccagccttaaaattggtccatcatagacctt 306  Q
    |||||||||| ||||||||| || | |||||||| ||||| ||| ||||||||    
T  5186694 aacttcaaatatctatggtgaacaaaccttaaaa-tggtcaatcgtagacctt 5186745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 6452285 - 6452399
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| |||||| ||||| |||||||||||||||||||| ||||||||  | ||||||||||  ||||||||| ||||||||  |||| ||||||||||    
T  6452285 ttatttaatccatcggtcccctaaataatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgc 6452384  T
Q  229 caaataaatcttgac 243  Q
    |||||||||| ||||    
T  6452385 caaataaatcctgac 6452399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 269
Target Start/End: Original strand, 232183 - 232316
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||||||||||||  ||||||||||||| |||||||||||||| || |||||||||| |  ||||||| ||||||||  |||| ||||||||||||||||    
T  232183 gatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaac--acgttttagtccctcactttttcctccgtttgccaaata 232280  T
Q  235 aat-cttgactgttaactttaacttcaaatgtctat 269  Q
    ||| |   ||||||||||||||||  ||||||||||    
T  232281 aatcccaaactgttaactttaactctaaatgtctat 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 27080923 - 27081035
Alignment:
Q  127 gattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgttt 226  Q
    |||||||||||||| || |||  ||||||||||| ||||||||||||||||| ||||||||||||   ||| |||  ||||||||  |||||||||||||    
T  27080923 gattatttgatccaatgatcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgttt 27081022  T
Q  227 gccaaataaatct 239  Q
    || ||||||||||    
T  27081023 gcgaaataaatct 27081035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 32507116 - 32506984
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttgactgttaactt 252  Q
    |||||||| |||||||||||| || |||| ||||||||      ||||| ||||||||  |||||||| |||||||||||||||| ||||||||||| ||    
T  32507116 taatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtttgccaaataaatccttgactgttaagtt 32507017  T
Q  253 taacttcaaatgtctatggtggaccagccttaa 285  Q
    ||||  ||||| |||||||||||||| ||||||    
T  32507016 taaccccaaatatctatggtggaccaaccttaa 32506984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 34024178 - 34024073
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| || | ||| |||||||||||| |||||||||||||| |||||||||||||  |||| ||||| |||||||  |||| |||||||||     
T  34024178 ttatttgatccaatgattctc-aaataatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtttgt 34024080  T
Q  229 caaataa 235  Q
    |||||||    
T  34024079 caaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 6702960 - 6702852
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||||||||||||     ||||||  ||||||| ||||| |||||||||||||||||||| |||||||||| |||    
T  6702960 taatttcatattttcattttggtcccacaattaataaaaatggcgtttta-tccctcacgttttcctccgtttgccaaataaatcctgactgttaagttt 6702862  T
Q  254 aacttcaaat 263  Q
    |||| |||||    
T  6702861 aactccaaat 6702852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 300
Target Start/End: Complemental strand, 7311839 - 7311667
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||| || || ||||||  |||||||||| |||||||||||||| || ||||||||||||| ||||| ||||||||||| |  ||||| ||  |||||    
T  7311839 ttatttaattcaatggtcccttaaataattttaagttttcattttgatcccacaattaataaa-cgtaccttttggtcccttacttttttatctatttgc 7311741  T
Q  229 caaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcata 300  Q
    |||||||||| | || ||||| ||||| | |||   |||||||||||| |||| |||||| | ||||||| ||||    
T  7311740 caaataaatcctcacagttaagtttaa-tccaaatgatgtctatggtgaaccaaccttaagagtggtccaccata 7311667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 34023887 - 34023982
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgt 224  Q
    |||||||||| | ||||||   ||||||||| ||||||||||||||||  ||||||||||||| ||||| |||||||||||||  |||| ||||||    
T  34023887 ttatttgatcaaatggtccctcaaataattttaagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctccgt 34023982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 264
Target Start/End: Complemental strand, 18346840 - 18346731
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    ||||||||  |||||||||||||| |||||||||||||     ||||||| ||||||| |||| |||| ||||||||||||||||  ||||||||| |||    
T  18346840 taatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgtttgccaaataaatc-cgactgttaatttt 18346742  T
Q  254 aacttcaaatg 264  Q
    ||| |||||||    
T  18346741 aacctcaaatg 18346731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 23392240 - 23392390
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||  ||||||||||||||| |||||||||||||     |||||  ||||||||  |||| |||||||||||||||||||| | | |||||| |||    
T  23392240 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 23392339  T
Q  254 aacttcaaatg--tctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  ||||||   ||| |||||| || |||||||| ||||||| ||||||    
T  23392340 aaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccataga 23392390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 233673 - 233543
Alignment:
Q  135 gatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaata 234  Q
    |||| ||||||||| ||||||||||||| |||||||||||||| || ||||||||||    ||||||| ||||||| | ||||||    |||||||||||    
T  233673 gatcaattggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctc-attttttc----tttgccaaata 233579  T
Q  235 aatct-tgactgttaactttaacttcaaatgtctat 269  Q
    |||||   | ||||||||||||||  ||||||||||    
T  233578 aatctcaaattgttaactttaactctaaatgtctat 233543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 27967164 - 27967054
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||| | |||||||| | ||||||||||||| || ||||||||||| | | ||| ||||| ||| | || |||| || |||||||    
T  27967164 ttatttgatccaatggtcccccaaataattcctagttttcattttgatcccacaattaatagaacatacattttgatcctttaatttttcctacgtttgc 27967065  T
Q  229 caaataaatct 239  Q
    |||| ||||||    
T  27967064 caaaaaaatct 27967054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 5187712 - 5187562
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaacttt 253  Q
    |||||||| ||||||||||||||| || ||||||||||     |||||| || ||| |  ||||| ||||||||||||||||||| |||| ||||| |||    
T  5187712 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccgtttgccaaataaatcctgacggttaagttt 5187613  T
Q  254 aacttcaaa---tgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||  ||||   ||||||| |||||||| |||||||| |||| || ||||||    
T  5187612 aac-ccaaatgttgtctatagtggaccaaccttaaaagtggttcaccataga 5187562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 2688014 - 2687930
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||| ||||||||||| ||| |||||||||||||     |||||| ||||||||  ||||| |||||||||||||||||||    
T  2688014 taatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccgtttgccaaataaatc 2687930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 6701406 - 6701526
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaa--tcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaact 251  Q
    ||||||||  |||||||||||||| |||||||||||||  | |||  |||| ||||||||  |||| |||||||||||||||||||| |   ||| ||||    
T  6701406 taatttcatattttcattttggtcccacaattaataaaaatggta--ttttagtccctcacattttcctccgtttgccaaataaatcgtttatgtcaact 6701503  T
Q  252 ttaacttcaaatgtctatggtgg 274  Q
    ||||| |||||| ||||| ||||    
T  6701504 ttaacctcaaatatctattgtgg 6701526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 2687256 - 2687340
Alignment:
Q  154 taatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc 238  Q
    |||||||| |||||||||||| || |||||||||||||     |||||| |||| |||  |||| ||||||||||||||||||||    
T  2687256 taatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatc 2687340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 11967334 - 11967391
Alignment:
Q  245 gttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||||| |||||||||||| |||||||| |||| | |  |||||||||||||    
T  11967334 gttaactttaacctcaaatgtctattgtggaccaaccttgagaggggtccatcataga 11967391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 15730145 - 15730036
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcg-tacgttttggtccctcaagtttttctccgtttg 227  Q
    ||||| ||| |||||||||   || ||||||| | |||||||||||||| |||||||||||||    ||| |||||||||||||  ||||  ||||||||    
T  15730145 ttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccgtttg 15730046  T
Q  228 ccaaataaat 237  Q
    | ||||||||    
T  15730045 ctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 129 - 302
Target Start/End: Original strand, 123970 - 124143
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||  |||| ||| ||||||    
T  123970 ttatttgatccaatggtccttcaaataatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgc 124069  T
Q  229 caaataaatcttgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||||||||| | || ||||| ||||||  ||||| |||||||||||||| |||||| | ||||||| ||||||    
T  124070 caaataaatccttacggttaagtttaaccccaaatatctatggtggaccaaccttaagagtggtccaccataga 124143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 120 - 315
Target Start/End: Complemental strand, 125357 - 125159
Alignment:
Q  120 aaaataagattatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttc 219  Q
    |||| ||| |||||||||||| ||||||   |||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||  |||| |    
T  125357 aaaaaaagcttatttgatccaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcc 125258  T
Q  220 tccgtttgccaaataaatcttgactgttaactttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcatagaccttcataaattt 315  Q
    ||||||||||||||||||| | || ||||| ||||||  |||   |||| |||| ||||||| |||||||| ||||||| ||||||||||  |||||||    
T  125257 tccgtttgccaaataaatcctaacggttaagtttaaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaattt 125159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 337
Target Start/End: Complemental strand, 63234 - 63037
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    ||||||||| ||||||||||  ||||||||||||||| |||||||||||||     |||||| ||||||||  |||||||||||||||||||||||| |     
T  63234 ttggtcctccaaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttctccgtttgccaaataaatccc 63135  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt-aattttaacctttagatct 337  Q
    |||||||||| |||||||||||||||||||| |||| ||  ||||| | ||||||| |||| | |||||| ||||| || |||||||||| || |||||    
T  63134 tgactgttaagtttaacttcaaatgtctatgatggatcaatcttaagaatggtccaccata-aacttcattaattttttaaattttaaccgtttgatct 63037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 61864 - 61963
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||||     |||||| ||||||||  ||||  |||||||||||||||||||||    
T  61864 ttggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccgtttgccaaataaatctt 61963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 337
Target Start/End: Complemental strand, 784 - 587
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    |||||||||||| ||||||| |||||||||||||||| || || ||||||| |  | ||||||||||||||||||| |||| ||  | ||||||||| |     
T  784 ttggtcctctaattaatttccagttttcattttggtcccataactaataaaactcatgttttggtccctcaagtttgtctctgtcggtcaaataaatccc 685  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatct 337  Q
    ||| ||| || |||||| |||||||| |||  ||||||| |||||| | ||||||| ||||||||||  ||||||| ||||||| |||| || |||||    
T  684 tgattgtcaagtttaacctcaaatgtatataatggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatct 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 164 - 363
Target Start/End: Complemental strand, 2556 - 2365
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaactttaacttcaaat 263  Q
    |||||||||||||| |||||||||||||  |||| ||||||||||| |  |||| ||| |||| ||||||||||   ||||||||||||||||| |||||    
T  2556 ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgttttccaaataaattccgactgttaactttaactccaaat 2457  T
Q  264 gtct-atggtggaccagccttaaaattggtccatcatagaccttcataaatttgttaattttaacctttagatctatttatgataaaagggaccgttaga 362  Q
     | | ||||||||||| |||||||| ||||| ||| ||||||         || |||||||||||| || |||||||||||  |||||||||||||||||    
T  2456 atgtaatggtggaccaaccttaaaagtggtctatcgtagacc---------ttattaattttaaccattcgatctatttatcttaaaagggaccgttaga 2366  T

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Target: scaffold0078 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 18813 - 18922
Alignment:
Q  129 ttatttgatccattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgc 228  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||| || | |||||||| | || ||||| ||||||||  |||| ||||||||||    
T  18813 ttatttgatccattgatcctttaaataattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgc 18912  T
Q  229 caaataaatc 238  Q
    ||||||||||    
T  18913 caaataaatc 18922  T

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Target: scaffold0011 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 127446 - 127608
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaat-ct 239  Q
    ||||||| |||| ||||||||||||||| |||||||| || || ||||||| |  | |||||||||||||| ||||  ||||||  | ||||||||| |     
T  127446 ttggtcccctaattaatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtcggtcaaataaatccc 127545  T
Q  240 tgactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    |||| |||||||||||| |||||||||||||||| | || |||||| | ||||||| ||||||    
T  127546 tgacagttaactttaacctcaaatgtctatggtgaaacaaccttaagagtggtccaccataga 127608  T

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Target: scaffold0118 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 43668 - 43514
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatcttgactgttaac 250  Q
    ||||||||| ||||||| ||||||||| || |||||||||| |||| ||||  ||||||||  |||| ||||||||||||||||| || |||| |||||     
T  43668 aaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcctgacggttaag 43569  T
Q  251 tttaacttcaa---atgtctatggtggaccagccttaaaattggtccatcataga 302  Q
    ||||||  |||   |||||||||||||||||  ||||| | ||||||| ||||||    
T  43568 tttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccataga 43514  T

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Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 42458 - 42506
Alignment:
Q  179 cacaattaataaatcgtacgttttggtccctcaagtttttctccgtttg 227  Q
    |||||||||||||  |||||||||||||| |||  ||||||||||||||    
T  42458 cacaattaataaaaagtacgttttggtccttcagatttttctccgtttg 42506  T

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Target: scaffold0013 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 32585 - 32745
Alignment:
Q  141 ttggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatctt 240  Q
    |||||||  ||| |||||||||||||| ||||||||| || || ||||||| |    |||||||| || || |||| ||||| |  |||||||||||| |    
T  32585 ttggtcccgtaattaatttcaagtttttattttggtcacataactaataaaactcgtgttttggtgcc-catgtttgtctccatcggccaaataaatcct 32683  T
Q  241 gactgttaactttaacttcaaatgtctatggtggaccagccttaaaattggtccatcataga 302  Q
     ||||||||||||||| | ||||||||||||||||||| |||||  | ||||||||||||||    
T  32684 aactgttaactttaaccttaaatgtctatggtggaccaaccttaggagtggtccatcataga 32745  T

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Target: scaffold0201 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 337
Target Start/End: Original strand, 21163 - 21337
Alignment:
Q  164 ttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaatc-ttgactgttaactttaacttcaaa 262  Q
    |||||||||| ||| || ||||||||||  |||| ||||| ||||| |  |||| |||||||||||||||||||| ||   |||||| ||||||  ||||    
T  21163 ttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccgtttgccaaataaatcattcgttgttaagtttaaccacaaa 21262  T
Q  263 tgtctatggtggaccagccttaaaattggtccatcatagaccttcataaatttgtt-aattttaacctttagatct 337  Q
    |||||||||||||||| |||| | | ||||||| |||||| |||||| ||||| || |||||||||| || |||||    
T  21263 tgtctatggtggaccaaccttcagagtggtccaccataga-cttcattaattttttaaattttaaccgtttgatct 21337  T

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Target: scaffold1251 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 278
Target Start/End: Complemental strand, 1178 - 1050
Alignment:
Q  151 aaataatttcaagttttcattttggtctcacaattaataaatcgtacgttttggtccctcaagtttttctccgtttgccaaataaa-tcttgactgttaa 249  Q
    |||||||||| |||||||||||||||| || || ||||||| |  | ||||||||||||||| ||   ||||||  | |||||||| || ||  ||||||    
T  1178 aaataatttccagttttcattttggtcccataagtaataaaactcatgttttggtccctcaaattcacctccgtcagtcaaataaattcatgggtgttaa 1079  T
Q  250 ctttaacttcaaatgtctatggtggacca 278  Q
    |||||||  ||||||||||||||||||||    
T  1078 ctttaaccccaaatgtctatggtggacca 1050  T

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Target: scaffold0472 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 775 - 733
Alignment:
Q  214 tttttctccgtttgccaaataaatcttgactgttaactttaac 256  Q
    |||| |||||||||||| ||||||| |||||||||||||||||    
T  775 ttttcctccgtttgccatataaatcctgactgttaactttaac 733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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