View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18277_low_17 (Length: 267)

Name: NF18277_low_17
Description: NF18277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18277_low_17
NF18277_low_17
[»] chr2 (12 HSPs)
chr2 (183-255)||(26543105-26543177)
chr2 (23-72)||(1093920-1093969)
chr2 (19-74)||(33830894-33830949)
chr2 (19-72)||(20986070-20986123)
chr2 (19-72)||(2647681-2647734)
chr2 (19-72)||(18053400-18053453)
chr2 (78-127)||(26543163-26543212)
chr2 (35-72)||(34116851-34116888)
chr2 (19-72)||(36538083-36538136)
chr2 (19-80)||(18667123-18667184)
chr2 (19-72)||(27633148-27633201)
chr2 (28-60)||(40675188-40675220)
[»] chr5 (23 HSPs)
chr5 (19-81)||(27451071-27451133)
chr5 (19-72)||(34720144-34720197)
chr5 (19-72)||(34724120-34724173)
chr5 (19-80)||(26217421-26217482)
chr5 (19-80)||(26299444-26299505)
chr5 (19-72)||(34856952-34857005)
chr5 (19-72)||(1841058-1841111)
chr5 (19-72)||(3805454-3805507)
chr5 (28-72)||(10493385-10493429)
chr5 (20-72)||(22921444-22921496)
chr5 (19-74)||(14501427-14501482)
chr5 (22-72)||(5385173-5385223)
chr5 (19-69)||(26297914-26297964)
chr5 (19-81)||(29322060-29322122)
chr5 (19-72)||(11136744-11136797)
chr5 (19-72)||(19283665-19283718)
chr5 (23-72)||(38523335-38523384)
chr5 (19-60)||(39408737-39408778)
chr5 (20-60)||(19715791-19715831)
chr5 (19-60)||(27195441-27195482)
chr5 (19-72)||(32157466-32157519)
chr5 (19-60)||(39406999-39407040)
chr5 (19-72)||(43385804-43385857)
[»] chr1 (25 HSPs)
chr1 (19-72)||(38061700-38061753)
chr1 (19-72)||(5205191-5205244)
chr1 (19-74)||(24575304-24575359)
chr1 (19-74)||(45654448-45654503)
chr1 (19-72)||(28005741-28005794)
chr1 (19-74)||(7955653-7955708)
chr1 (19-72)||(29678185-29678238)
chr1 (19-72)||(45582180-45582233)
chr1 (19-74)||(21681703-21681758)
chr1 (19-72)||(14579112-14579165)
chr1 (19-72)||(23916137-23916190)
chr1 (19-80)||(48575817-48575878)
chr1 (33-72)||(47982672-47982711)
chr1 (34-72)||(43090123-43090161)
chr1 (23-72)||(19507944-19507993)
chr1 (19-72)||(35810116-35810169)
chr1 (19-72)||(36418526-36418579)
chr1 (33-69)||(35634966-35635002)
chr1 (28-72)||(44595835-44595879)
chr1 (19-60)||(15257927-15257968)
chr1 (23-72)||(23915874-23915923)
chr1 (19-72)||(24470595-24470648)
chr1 (19-72)||(35309014-35309067)
chr1 (19-72)||(42936501-42936554)
chr1 (28-72)||(15014021-15014065)
[»] chr7 (26 HSPs)
chr7 (19-72)||(17026079-17026132)
chr7 (19-72)||(36926415-36926468)
chr7 (19-80)||(42012259-42012320)
chr7 (19-78)||(37106146-37106205)
chr7 (19-72)||(5795575-5795628)
chr7 (28-72)||(27232473-27232517)
chr7 (19-74)||(7443833-7443888)
chr7 (19-78)||(26215717-26215776)
chr7 (19-81)||(5776646-5776708)
chr7 (19-72)||(388433-388486)
chr7 (19-60)||(35544249-35544290)
chr7 (39-72)||(46574319-46574352)
chr7 (28-72)||(18740944-18740988)
chr7 (28-72)||(26719165-26719209)
chr7 (19-74)||(3931430-3931485)
chr7 (19-74)||(37333701-37333756)
chr7 (20-74)||(223025-223079)
chr7 (19-61)||(8390219-8390261)
chr7 (19-69)||(45174646-45174696)
chr7 (19-72)||(666297-666350)
chr7 (19-72)||(7539732-7539785)
chr7 (19-72)||(17608034-17608087)
chr7 (19-72)||(30918936-30918989)
chr7 (19-60)||(33899686-33899727)
chr7 (19-72)||(43052288-43052341)
chr7 (28-60)||(36471827-36471859)
[»] chr4 (27 HSPs)
chr4 (19-72)||(25133939-25133992)
chr4 (19-72)||(40797160-40797213)
chr4 (19-72)||(7505430-7505483)
chr4 (19-72)||(52705599-52705652)
chr4 (19-79)||(4275623-4275683)
chr4 (33-79)||(12673763-12673809)
chr4 (19-72)||(9469434-9469486)
chr4 (19-72)||(43386540-43386593)
chr4 (19-72)||(55892752-55892805)
chr4 (20-72)||(19850138-19850190)
chr4 (19-71)||(50605462-50605514)
chr4 (19-74)||(21436311-21436366)
chr4 (19-74)||(45674308-45674363)
chr4 (19-72)||(43812745-43812798)
chr4 (19-72)||(44792862-44792915)
chr4 (19-60)||(46945256-46945297)
chr4 (19-72)||(49820384-49820437)
chr4 (19-72)||(51994089-51994142)
chr4 (19-71)||(49378173-49378225)
chr4 (19-59)||(51409195-51409235)
chr4 (19-74)||(54742087-54742142)
chr4 (19-69)||(12790227-12790277)
chr4 (19-69)||(52812976-52813026)
chr4 (19-72)||(79766-79819)
chr4 (20-60)||(1803185-1803225)
chr4 (24-60)||(32398464-32398500)
chr4 (28-60)||(44377628-44377660)
[»] chr3 (19 HSPs)
chr3 (19-70)||(25252882-25252933)
chr3 (19-60)||(30662844-30662885)
chr3 (25-74)||(33439329-33439378)
chr3 (19-72)||(54432960-54433013)
chr3 (28-72)||(7834068-7834112)
chr3 (19-79)||(54394122-54394182)
chr3 (21-72)||(52198782-52198833)
chr3 (19-72)||(5418049-5418102)
chr3 (19-72)||(27040625-27040678)
chr3 (19-72)||(39471160-39471213)
chr3 (19-72)||(41609320-41609373)
chr3 (25-74)||(45714119-45714168)
chr3 (19-72)||(53530237-53530290)
chr3 (18-69)||(20407830-20407881)
chr3 (34-72)||(46294333-46294371)
chr3 (19-72)||(7029141-7029194)
chr3 (28-69)||(26050187-26050228)
chr3 (19-72)||(38644305-38644358)
chr3 (19-60)||(40942913-40942954)
[»] chr8 (7 HSPs)
chr8 (24-74)||(33280724-33280774)
chr8 (19-72)||(27189634-27189687)
chr8 (28-72)||(13784216-13784260)
chr8 (28-72)||(34515561-34515605)
chr8 (19-72)||(9413345-9413398)
chr8 (19-60)||(39477436-39477477)
chr8 (28-72)||(22930934-22930978)
[»] chr6 (10 HSPs)
chr6 (19-69)||(7436709-7436759)
chr6 (19-72)||(4442076-4442129)
chr6 (19-72)||(6998582-6998635)
chr6 (19-72)||(7957060-7957113)
chr6 (19-65)||(33109845-33109891)
chr6 (19-72)||(18961851-18961904)
chr6 (28-72)||(10962512-10962556)
chr6 (19-74)||(13311357-13311407)
chr6 (39-79)||(17493433-17493473)
chr6 (21-81)||(17507964-17508024)
[»] scaffold0043 (1 HSPs)
scaffold0043 (33-72)||(16498-16537)
[»] scaffold0658 (1 HSPs)
scaffold0658 (19-69)||(6474-6524)
[»] scaffold0106 (1 HSPs)
scaffold0106 (19-72)||(26499-26552)
[»] scaffold0746 (1 HSPs)
scaffold0746 (28-74)||(5371-5417)
[»] scaffold0316 (1 HSPs)
scaffold0316 (19-72)||(18716-18769)
[»] scaffold0444 (1 HSPs)
scaffold0444 (28-60)||(1498-1530)


Alignment Details
Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 26543177 - 26543105
Alignment:
Q  183 tttctgtttgatactgatcatttcagtatctgccttgattgaaccaccttcttcttctccgaagcatgatgat 255  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26543177 tttctgtttgatactgagcatttcagtatctgccttgattgaaccaccttattcttctccgaagcatgatgat 26543105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 1093969 - 1093920
Alignment:
Q  23 tcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  1093969 tcgagtcgagtcgaactcagacaggttcgactcgactcgactcatttcca 1093920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 33830949 - 33830894
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||||    
T  33830949 cttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccaac 33830894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 20986123 - 20986070
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  20986123 cttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 20986070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 2647681 - 2647734
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||| |||||||  |||||||||||||||||||||||||    
T  2647681 cttatcgagtcgagccgagttcagacaaattcgactcgactcgactcatttcca 2647734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 18053453 - 18053400
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| ||||| ||||||| |||||| |||||||||||||||||||    
T  18053453 cttaacgagtcgagtcgagatcagacaagttcgattcgactcgactcatttcca 18053400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 26543212 - 26543163
Alignment:
Q  78 aatgctaaacaaaaacttctttatacaactctttgtttatgtttgatact 127  Q
    |||||||||||||||| ||||||||||| ||||| ||| |||||||||||    
T  26543212 aatgctaaacaaaaacatctttatacaagtctttatttctgtttgatact 26543163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 34116851 - 34116888
Alignment:
Q  35 gagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||||||| |||||||||||||||||||    
T  34116851 gagctcagacaggttcgattcgactcgactcatttcca 34116888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 36538136 - 36538083
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||||||||||||   |||||||||||||||||||    
T  36538136 cttatcgagtcgagccgagctcagacaggttcagttcgactcgactcatttcca 36538083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 18667184 - 18667123
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaat 80  Q
    |||||||||||||  | |||||||||  |||||| ||||||||| ||||||||||| |||||    
T  18667184 cttatcgagtcgagccaagctcagacgagttcgattcgactcgattcatttccaaccctaat 18667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 27633201 - 27633148
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||| ||||||  ||||||||| ||||||||  |||||||||||||||||||    
T  27633201 cttatcaagtcgagccgagctcaggcaggttcggttcgactcgactcatttcca 27633148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 40675220 - 40675188
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||||||||||| ||||||||||||||    
T  40675220 tcgaatcgagctcagacaagttcgactcgactc 40675188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 27451071 - 27451133
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaatg 81  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27451071 cttatcgagtcgaatcgagctcagacaggtttgactcgactcgactcatttccaaccctaatg 27451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 34720144 - 34720197
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34720144 cttatcgagtcgaatcgagctcggacaggttcgactcgactcgactcatttcca 34720197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 34724120 - 34724173
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34724120 cttatcgagtcgaatcgagctcggacaggttcgactcgactcgactcatttcca 34724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 26217482 - 26217421
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaat 80  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  26217482 cttattgagtcgaaccgagctcagacaagttcgactcgactcgactcatttccaaccctaat 26217421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 26299505 - 26299444
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaat 80  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||    
T  26299505 cttatcgagtcgaatcgagctcagacaagtttgactcgactcgactcattttcaaccctaat 26299444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 34857005 - 34856952
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  34857005 cttatcgagtcgaatcgaactcagacagattcgactcgactcgactcatttcca 34856952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 1841058 - 1841111
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||||||||| |  |||||||||||||||||||    
T  1841058 cttatcgagtcgagtcgagctcagacaggtttggttcgactcgactcatttcca 1841111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 3805454 - 3805507
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  3805454 cttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 3805507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 10493429 - 10493385
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||||||||||||||| |||||||||||||||||||    
T  10493429 tcgagtcgagctcagacaggttcgattcgactcgactcatttcca 10493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 22921496 - 22921444
Alignment:
Q  20 ttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||| || ||||||||||||||| |||| |||||||||||||||||||    
T  22921496 ttatcgagtggagtcgagctcagacaggctcgattcgactcgactcatttcca 22921444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 14501427 - 14501482
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  ||||||||||||  ||||||||||| |||||||||||||||    
T  14501427 cttatcgagtcgagccgagctcagacaaattcgactcgacgcgactcatttccaac 14501482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 5385173 - 5385223
Alignment:
Q  22 atcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||| |||||||||||||||| | |||||| |||||||||||||||||||    
T  5385173 atcgaatcgaatcgagctcagaaaagttcgattcgactcgactcatttcca 5385223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 26297964 - 26297914
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    ||||||||||||||||||||||| ||||||| |||| || |||||||||||    
T  26297964 cttatcgagtcgaatcgagctcacacaggtttgacttgattcgactcattt 26297914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 29322122 - 29322060
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaatg 81  Q
    |||||||||||||  ||||||||| ||||||||  ||||||||||||||||||| | ||||||    
T  29322122 cttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagccctaatg 29322060  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 11136744 - 11136797
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||| ||||  |||| ||||||| ||||||||||||||||||||||||||    
T  11136744 cttatcgaatcgagccgagttcagacaagttcgactcgactcgactcatttcca 11136797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 19283665 - 19283718
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||| | |||||| || ||||||||||||||||    
T  19283665 cttatcgagtcgagtcgagctcagataagttcgattctactcgactcatttcca 19283718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 38523335 - 38523384
Alignment:
Q  23 tcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  38523335 tcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 38523384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 39408778 - 39408737
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  39408778 cttatcgagtcgaatcgagctcggacaggtacgactcgactc 39408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 19715831 - 19715791
Alignment:
Q  20 ttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  19715831 ttatcgagtcgaatcgagctcagacaagttcgactctactc 19715791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 27195482 - 27195441
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||    
T  27195482 cttattgagtcgagtcgagctcagacatgttcgactcgactc 27195441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 32157466 - 32157519
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||| |||||||||||   |||||||||||||||||||    
T  32157466 cttatcgagtcgagccgagcccagacaggttcagttcgactcgactcatttcca 32157519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 39407040 - 39406999
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||||||||| ||||| ||||||| |||||||||||    
T  39407040 cttatcgagtcgaatcaagctcggacaggtacgactcgactc 39406999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 43385857 - 43385804
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||||||  ||||||||||||||| | ||||||||    
T  43385857 cttatcgagtcgagccgagctcagacgagttcgactcgactcggcacatttcca 43385804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 38061700 - 38061753
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38061700 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 38061753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 5205191 - 5205244
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5205191 cttatggagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 5205244  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 24575359 - 24575304
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  24575359 cttatcgattcaaatcgagctcagacaggttcgactcgactcgactcatttccaac 24575304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 45654448 - 45654503
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  45654448 cttatcgagtcgagtcgagctcaggcaggttcgactcgactcgactcatttccaac 45654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 28005794 - 28005741
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  28005794 cttatcgagtcgagtcgagctcagagaggttcgactcgactcgactcatttcca 28005741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 7955708 - 7955653
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  7955708 cttattgagtcgagtcgagctcagacagattcgactcgactcgactcatttccaac 7955653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 29678185 - 29678238
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  29678185 cttatcgagtcgagtcaagctcagacaggttcgattcgactcgactcatttcca 29678238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 45582180 - 45582233
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  45582180 cttatcgagtcgagtcgagctcatacagattcgactcgactcgactcatttcca 45582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 21681703 - 21681758
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||    
T  21681703 cttatcgagtcgagttgagctcaggcaggttcgactcgactcggctcatttccaac 21681758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 14579112 - 14579165
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  14579112 cttaacgagtcgagtcgagctcatacaggttcgattcgactcgactcatttcca 14579165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 23916190 - 23916137
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  23916190 cttaacgagtcgagtcgagcttagacaggttcgattcgactcgactcatttcca 23916137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 48575817 - 48575878
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaat 80  Q
    ||||||||||||| ||||||||||||| |||||| |||| ||||||||||| |||| |||||    
T  48575817 cttatcgagtcgagtcgagctcagacatgttcgattcgattcgactcattttcaaccctaat 48575878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 47982711 - 47982672
Alignment:
Q  33 tcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  47982711 tcgagcttagacaggttcgactcgactcgactcatttcca 47982672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 43090123 - 43090161
Alignment:
Q  34 cgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  43090123 cgagctcagacaagttcgactcgactcgactcatttcca 43090161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 19507993 - 19507944
Alignment:
Q  23 tcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||  |||||||||| | ||||||||||||||||||||||||||    
T  19507993 tcgagtcgagccgagctcagataagttcgactcgactcgactcatttcca 19507944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 35810169 - 35810116
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  35810169 cttaacgagtcgagttgagctcagataggttcgattcgactcgactcatttcca 35810116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 36418579 - 36418526
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||| ||| ||||| |||||||||||||||||||    
T  36418579 cttatcgagtcgagccgagctcaggcagattcgattcgactcgactcatttcca 36418526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 35635002 - 35634966
Alignment:
Q  33 tcgagctcagacaggttcgactcgactcgactcattt 69  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35635002 tcgagctcagacaagttcgactcgactcgactcattt 35634966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 44595879 - 44595835
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||||||||||||||  |||||||||||||||||||    
T  44595879 tcgagtcgagctcagacaggttcggttcgactcgactcatttcca 44595835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 15257927 - 15257968
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    ||||||||||||| | |||||||||||| |||||||||||||    
T  15257927 cttatcgagtcgagttgagctcagacagattcgactcgactc 15257968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 23915874 - 23915923
Alignment:
Q  23 tcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||| ||||||||||||| |||||| || ||||||||||||||||    
T  23915874 tcgaatcgagtcgagctcagacaagttcgattctactcgactcatttcca 23915923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 24470595 - 24470648
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||| ||  ||||||||| ||||||||  |||||||||||||||||||    
T  24470595 cttatcgagttgagccgagctcaggcaggttcggttcgactcgactcatttcca 24470648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 35309067 - 35309014
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||| |||||||||  |||||||  ||||||| |||||||||||    
T  35309067 cttatcgagtcgaaccgagctcaggtaggttcggttcgactcaactcatttcca 35309014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 42936554 - 42936501
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| | || |||||||| |||||| |||||||||||||||||||    
T  42936554 cttaacgagtcgagttgaactcagacaagttcgattcgactcgactcatttcca 42936501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15014065 - 15014021
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| ||||||||||||| ||| || |||||||||||||||||||    
T  15014065 tcgagtcgagctcagacaagtttgattcgactcgactcatttcca 15014021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 17026079 - 17026132
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  17026079 cttatcgagtcgagtcgagctcagacaagttcgactcgactcgactcatttcca 17026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 36926468 - 36926415
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  36926468 cttatcgagtcgagccgagctcagacaggttcgattcgactcgactcatttcca 36926415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 42012259 - 42012320
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaat 80  Q
    |||| |||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  42012259 cttaacgagtcgagtcgagctcagacaagttcgattcgactcgactcatttccagctctaat 42012320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 37106205 - 37106146
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactcta 78  Q
    |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||    
T  37106205 cttaacgagtcgagtcgaactcagacaggttcgattcgactcgactcatttccagctcta 37106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 5795575 - 5795628
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||| ||||||||| |||||||||||||||||||    
T  5795575 cttatcgagtcgagccgagctcaggcaggttcgattcgactcgactcatttcca 5795628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27232473 - 27232517
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  27232473 tcgaatcgagctcagacagattcgattcgactcgactcatttcca 27232517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 7443888 - 7443833
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||    
T  7443888 cttatcgagtcgagccgagctcagacagattcggttcgactcgactcatttccaac 7443833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 26215776 - 26215717
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactcta 78  Q
    |||||||||||||  ||||||||| ||||||||  ||||||||||||||||||| |||||    
T  26215776 cttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagctcta 26215717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 5776646 - 5776708
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaatg 81  Q
    |||||||||||||  ||||||||| ||||||||  ||||||||||||||||||| | ||||||    
T  5776646 cttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagccctaatg 5776708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 388486 - 388433
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||| ||||||||| || |||||  |||||||||||||||||||    
T  388486 cttatcgagtcgaaccgagctcaggcaagttcggttcgactcgactcatttcca 388433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 35544249 - 35544290
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  35544249 cttatcgagtcgaatcgagctcagacatgtttgactcgactc 35544290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 46574319 - 46574352
Alignment:
Q  39 tcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||||||||||||||||||||||||    
T  46574319 tcagacaggttcgactcgactcgactcatttcca 46574352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 18740944 - 18740988
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||    
T  18740944 tcgagtcgagcttagagaggttcgactcgactcgactcatttcca 18740988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 26719209 - 26719165
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||    
T  26719209 tcgagtcgagctcagacagattcgactcgactcgactcatgtcca 26719165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 3931430 - 3931485
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  ||||||||||||||||||  | ||||| |||||||||||||    
T  3931430 cttatcgagtcgagccgagctcagacaggttcggttggactcaactcatttccaac 3931485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 37333756 - 37333701
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  | ||||||| ||||||||  |||||||||||||||||||||    
T  37333756 cttatcgagtcgagccaagctcaggcaggttcggttcgactcgactcatttccaac 37333701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 223025 - 223079
Alignment:
Q  20 ttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||||||||  | |||||||||||||||||  |||||| |||||||||||||    
T  223025 ttatcgagtcgagccaagctcagacaggttcgatccgactcaactcatttccaac 223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 8390219 - 8390261
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcg 61  Q
    ||||||||||||| ||||||||||||| | |||||||||||||    
T  8390219 cttatcgagtcgagtcgagctcagacaaggtcgactcgactcg 8390261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 45174696 - 45174646
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    ||||| |||||||  ||||||||||||||||||  ||||||||||||||||    
T  45174696 cttattgagtcgagccgagctcagacaggttcggttcgactcgactcattt 45174646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 666297 - 666350
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||| |  |||||||||||| |||||  |||||||||||||||||||    
T  666297 cttatcgagtcaagccgagctcagacatgttcggttcgactcgactcatttcca 666350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 7539732 - 7539785
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||||||  ||||||||| ||||| ||||||||||    
T  7539732 cttatcgagtcgagccgagctcagacgagttcgactcaactcggctcatttcca 7539785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 17608087 - 17608034
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| || ||||||||||||||| | ||||||| |||||||||||    
T  17608087 cttaacgagtcgagtcaagctcagacaggttcaattcgactctactcatttcca 17608034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 30918989 - 30918936
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||| || ||||||||||| |||||||  ||||||||| |||||||||    
T  30918989 cttatcgagttgagtcgagctcagataggttcggttcgactcgattcatttcca 30918936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 33899686 - 33899727
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    ||||||||||||| ||||||| |||||| |||||||||||||    
T  33899686 cttatcgagtcgagtcgagctgagacagattcgactcgactc 33899727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 43052341 - 43052288
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||| ||||||||  ||||||||||| |||||||    
T  43052341 cttatcgagtcgagccgagctcaggcaggttcggttcgactcgactgatttcca 43052288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 36471859 - 36471827
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||| ||||||||||||||||||||||||||||    
T  36471859 tcgagtcgagctcagacaggttcgactcgactc 36471827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 25133992 - 25133939
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  25133992 cttatcgagtcgagtcgagctcagacagattcgactcgactcgactcatttcca 25133939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 40797213 - 40797160
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  40797213 cttatcgagtcgagtcgagctcagacagattcgactcgactcgactcatttcca 40797160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 7505483 - 7505430
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  7505483 cttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttcca 7505430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 52705652 - 52705599
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  52705652 cttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttcca 52705599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 4275623 - 4275683
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaa 79  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  4275623 cttatcgagtcgagtcgagctcaggcagattcgactcgactcggctcatttccaaccctaa 4275683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 12673763 - 12673809
Alignment:
Q  33 tcgagctcagacaggttcgactcgactcgactcatttccaactctaa 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  12673763 tcgagctcagacaggttcgactcgactcgactcattttcaaccctaa 12673809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 9469486 - 9469434
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  9469486 cttatcgagtcgagccgagctcagacaggttcga-tcgactcgactcatttcca 9469434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 43386593 - 43386540
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||||||||    
T  43386593 cttatcgagtcgagtcgagctcagacaggttcagttcgactcgactcatttcca 43386540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 55892752 - 55892805
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  55892752 cttatcgagtcgagtcgagctcagatagattcgattcgactcgactcatttcca 55892805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 19850190 - 19850138
Alignment:
Q  20 ttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  19850190 ttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 19850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 50605514 - 50605462
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcc 71  Q
    |||||||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  50605514 cttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcc 50605462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 21436366 - 21436311
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  ||| ||||||||||||||  |||||||||||||||||||||    
T  21436366 cttatcgagtcgagccgaactcagacaggttcggttcgactcgactcatttccaac 21436311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 45674363 - 45674308
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||||||||  ||||||||| ||||||||  |||||||||||||||||||||    
T  45674363 cttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccaac 45674308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 43812745 - 43812798
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||    
T  43812745 cttaacgagtcgaatcgagctcatacatgttcgattcgactcgaatcatttcca 43812798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 44792862 - 44792915
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||| |||||||||  |||||||||||||||||||    
T  44792862 cttatcgagtcgagccgagctcatacaggttcggttcgactcgactcatttcca 44792915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 46945256 - 46945297
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  46945256 cttatcgagttgagtcgagctcagacaggttcgactcgactc 46945297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 49820437 - 49820384
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||| ||||||||| ||||||||| |||||||||    
T  49820437 cttatcgagtcgagccgagctcaggcaggttcgattcgactcgattcatttcca 49820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 51994142 - 51994089
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| |||||||||||| | ||||| |||||||||||||||||||    
T  51994142 cttaacgagtcgagtcgagctcagacggattcgattcgactcgactcatttcca 51994089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 49378173 - 49378225
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcc 71  Q
    |||||||| ||||  ||||||||||||||||||  ||||||||||||||||||    
T  49378173 cttatcgattcgagccgagctcagacaggttcggttcgactcgactcatttcc 49378225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 51409195 - 51409235
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgact 59  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  51409195 cttatcgagtcgagtcgagctcagacaagttcgactcgact 51409235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 54742142 - 54742087
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||| |||||| | ||||||||||||||||| || |||| ||||||||||||||||    
T  54742142 cttaacgagtcaagtcgagctcagacaggtttgattcgaatcgactcatttccaac 54742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 12790227 - 12790277
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    |||||||| ||||  ||||||||||||||||||  ||||||||||||||||    
T  12790227 cttatcgaatcgagccgagctcagacaggttcggttcgactcgactcattt 12790277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 52813026 - 52812976
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    |||||||||||||  ||| ||||||||||||||  ||||||||||||||||    
T  52813026 cttatcgagtcgagccgaactcagacaggttcggttcgactcgactcattt 52812976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 79819 - 79766
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||| || |||||||||||| |||| ||||||||||||||    
T  79819 cttatcgagtcgagccgaacttagacaggttcgattcgattcgactcatttcca 79766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 1803225 - 1803185
Alignment:
Q  20 ttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    ||||||| ||||||||| ||||||||||||| |||||||||    
T  1803225 ttatcgaatcgaatcgaactcagacaggttcaactcgactc 1803185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 32398464 - 32398500
Alignment:
Q  24 cgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  32398464 cgagtcgagtcgagctcagacaagttcgactcgactc 32398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 44377660 - 44377628
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||| ||||||||||||||||||||||||||||    
T  44377660 tcgagtcgagctcagacaggttcgactcgactc 44377628  T

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Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 25252933 - 25252882
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttc 70  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  25252933 cttatcgagtcgagttgagctcagacaggttcgactcgactcgactcatttc 25252882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 30662844 - 30662885
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  30662844 cttatcgagtcgaatcgagctcagacaggttcaactcgactc 30662885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 33439329 - 33439378
Alignment:
Q  25 gagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  33439329 gagtcgagtcgagctcagataggttcgattcgactcgactcatttccaac 33439378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 54432960 - 54433013
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  54432960 cttatcgagtcgagtcgagctcagacatattcgacttgactcgactcatttcca 54433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 7834112 - 7834068
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||    
T  7834112 tcgagtcgagttcagacaggttcgactcgactcgactcatttcca 7834068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 54394122 - 54394182
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaa 79  Q
    |||| |||||||| | || ||||||||||||||| ||||||||||||||||||||| ||||    
T  54394122 cttaacgagtcgagttgaactcagacaggttcgattcgactcgactcatttccaaccctaa 54394182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 52198833 - 52198782
Alignment:
Q  21 tatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  52198833 tatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 52198782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 5418102 - 5418049
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||| |  ||| |||||||| ||||||||||||||||||||||||||    
T  5418102 cttatcgagtcaagccgaactcagacaagttcgactcgactcgactcatttcca 5418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 27040625 - 27040678
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| | ||||||| ||| ||||||||||||||||||||||||||    
T  27040625 cttaacgagtcgagttgagctcaaacaagttcgactcgactcgactcatttcca 27040678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 39471160 - 39471213
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||| |||||||||||||  |||||||||||||||||||    
T  39471160 cttatcgagtcgagccgagttcagacaggttcggttcgactcgactcatttcca 39471213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 41609373 - 41609320
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||| ||||||||  |||||||||||||||||||    
T  41609373 cttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttcca 41609320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 45714168 - 45714119
Alignment:
Q  25 gagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||| ||||||||||| |||||||| || ||||||||||||||||||    
T  45714168 gagtcgagtcgagctcagataggttcgattcaactcgactcatttccaac 45714119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 53530237 - 53530290
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| ||||||||||||| |||||| |||| ||||||||||||||    
T  53530237 cttaacgagtcgagtcgagctcagacatgttcgattcgattcgactcatttcca 53530290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 20407830 - 20407881
Alignment:
Q  18 acttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    ||||||||||||||  |||||||| ||| ||| |||||||||||||||||||    
T  20407830 acttatcgagtcgagccgagctcaaacacgttggactcgactcgactcattt 20407881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 46294333 - 46294371
Alignment:
Q  34 cgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  46294333 cgagctcagacgagttcgactcgactcgactcatttcca 46294371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 7029194 - 7029141
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| |||| ||||||   |||||||| |||||||||||||||||    
T  7029194 cttatcgagtcgagtcgaactcagatgagttcgactggactcgactcatttcca 7029141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 26050187 - 26050228
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    |||| ||||||||||||| |||||||||||||| ||||||||    
T  26050187 tcgagtcgagctcagacatgttcgactcgactcaactcattt 26050228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 38644305 - 38644358
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||| ||||||  ||||||||||||||||||  ||||||| |||||||||||    
T  38644305 cttatctagtcgagccgagctcagacaggttcggttcgactccactcatttcca 38644358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 40942954 - 40942913
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||||||||| || |||||||||||||| |||||||||||||    
T  40942954 cttatcgagttgagtcgagctcagacagattcgactcgactc 40942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 33280724 - 33280774
Alignment:
Q  24 cgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  33280724 cgagtcgagtcgaactcagacaggttcgattcgactcgactcatttccaac 33280774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 27189634 - 27189687
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  27189634 cttaacgagtcgagtcgagctcagacaagttcgattcgactcgactcatttcca 27189687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 13784260 - 13784216
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  13784260 tcgagtcgagctcagacaggttcgactcgactcgaatcatttcca 13784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 34515605 - 34515561
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  34515605 tcgaatcgagctcagataggttcgattcgactcgactcatttcca 34515561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 9413345 - 9413398
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||||||| ||||   |||||||||||||||||||    
T  9413345 cttatcgagtcgagtcgagctcagacaagttcagttcgactcgactcatttcca 9413398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 39477477 - 39477436
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactc 60  Q
    ||||||||||||| |||||||||||||| |||||||||||||    
T  39477477 cttatcgagtcgagtcgagctcagacagattcgactcgactc 39477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 22930934 - 22930978
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| ||||| |||||||||||||  |||||||||||||||||||    
T  22930934 tcgagtcgagttcagacaggttcggttcgactcgactcatttcca 22930978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 7436759 - 7436709
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  7436759 cttatcgagtcgagtcgagctcagacaggttcgattcgactcgacttattt 7436709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 4442076 - 4442129
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| | |||||||||||||||||  |||||||||||||||||||    
T  4442076 cttatcgagtcgagttgagctcagacaggttcggttcgactcgactcatttcca 4442129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 6998635 - 6998582
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  6998635 cttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 6998582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 7957113 - 7957060
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  7957113 cttatcgagtcgagccgagctcagacaggttcgggtcgactcgactcatttcca 7957060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 33109891 - 33109845
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactc 65  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||    
T  33109891 cttatcgagtcgagccgagctcagacaagttcgactcgactcgactc 33109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 18961904 - 18961851
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  ||||||||| ||||||||| | |||||||||||||||||    
T  18961904 cttatcgagtcgagccgagctcaggcaggttcgatttgactcgactcatttcca 18961851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 10962512 - 10962556
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||    
T  10962512 tcgagtcgagctcagataggttcgattcgactcgactcatttcca 10962556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 13311407 - 13311357
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||||||||| ||||||||||||||     |||||||||||||||||||||||    
T  13311407 cttatcgagtcgagtcgagctcagacag-----actcgactcgactcatttccaac 13311357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 17493433 - 17493473
Alignment:
Q  39 tcagacaggttcgactcgactcgactcatttccaactctaa 79  Q
    |||||||  ||||| ||||||||||||||||||||||||||    
T  17493433 tcagacaaattcgattcgactcgactcatttccaactctaa 17493473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 17507964 - 17508024
Alignment:
Q  21 tatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttccaactctaatg 81  Q
    ||||||||||| || ||||||||   |||| |||||||| |||||||||||||| ||||||    
T  17507964 tatcgagtcgagtcaagctcagatgagttcaactcgactagactcatttccaaccctaatg 17508024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 16537 - 16498
Alignment:
Q  33 tcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  16537 tcgagctcagacaggttcgattcgactcgactcatttcca 16498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 6474 - 6524
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcattt 69  Q
    ||||||||||||| |||||||||| ||||||| | ||||||||||||||||    
T  6474 cttatcgagtcgagtcgagctcaggcaggttcaattcgactcgactcattt 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 26552 - 26499
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||| |||||||    
T  26552 cttatcgagtcgagtcgagctcaaacaggttcgattcaactcgactgatttcca 26499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 5371 - 5417
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactcgactcatttccaac 74  Q
    ||||||||||||||||||| || |  |||||||||||||||||||||    
T  5371 tcgaatcgagctcagacagatttggttcgactcgactcatttccaac 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 18769 - 18716
Alignment:
Q  19 cttatcgagtcgaatcgagctcagacaggttcgactcgactcgactcatttcca 72  Q
    |||||||||||||  |||||||| |||| ||||  |||||||||||||||||||    
T  18769 cttatcgagtcgagccgagctcaaacagattcggttcgactcgactcatttcca 18716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 1498 - 1530
Alignment:
Q  28 tcgaatcgagctcagacaggttcgactcgactc 60  Q
    |||| ||||||||||||||||||||||||||||    
T  1498 tcgagtcgagctcagacaggttcgactcgactc 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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