View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18278_high_24 (Length: 385)

Name: NF18278_high_24
Description: NF18278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18278_high_24
NF18278_high_24
[»] chr6 (69 HSPs)
chr6 (132-226)||(22778631-22778725)
chr6 (132-226)||(22764382-22764476)
chr6 (132-226)||(25506040-25506134)
chr6 (132-226)||(19714146-19714240)
chr6 (132-226)||(19899414-19899508)
chr6 (133-226)||(26896909-26897002)
chr6 (132-226)||(19720302-19720396)
chr6 (132-226)||(22232119-22232213)
chr6 (152-226)||(12667066-12667140)
chr6 (132-226)||(20452159-20452253)
chr6 (132-226)||(28702398-28702492)
chr6 (132-224)||(30824036-30824129)
chr6 (132-224)||(35091176-35091269)
chr6 (132-224)||(3917102-3917198)
chr6 (136-217)||(10984589-10984670)
chr6 (132-226)||(20458976-20459070)
chr6 (264-367)||(5974233-5974336)
chr6 (264-370)||(15720984-15721089)
chr6 (264-367)||(8710103-8710209)
chr6 (132-226)||(18909546-18909638)
chr6 (264-370)||(22731919-22732024)
chr6 (264-321)||(12482023-12482080)
chr6 (264-321)||(29691881-29691938)
chr6 (13-67)||(10984450-10984504)
chr6 (264-370)||(16736574-16736679)
chr6 (264-317)||(1821247-1821300)
chr6 (264-370)||(10915571-10915679)
chr6 (264-321)||(17697356-17697413)
chr6 (264-321)||(26356799-26356856)
chr6 (132-191)||(29600943-29601002)
chr6 (264-314)||(5087167-5087217)
chr6 (13-55)||(25505919-25505961)
chr6 (264-321)||(17245848-17245905)
chr6 (264-321)||(20897781-20897838)
chr6 (11-56)||(22778511-22778556)
chr6 (13-62)||(26897074-26897122)
chr6 (132-205)||(28002323-28002396)
chr6 (264-321)||(30661047-30661104)
chr6 (13-53)||(28702292-28702332)
chr6 (26-62)||(30823913-30823949)
chr6 (27-62)||(12666942-12666977)
chr6 (264-319)||(34046655-34046710)
chr6 (13-55)||(20452039-20452081)
chr6 (13-55)||(20458856-20458898)
chr6 (275-365)||(20510747-20510834)
chr6 (222-263)||(844310-844351)
chr6 (264-321)||(5079476-5079533)
chr6 (222-263)||(10915506-10915547)
chr6 (14-55)||(12663257-12663298)
chr6 (11-56)||(22764262-22764307)
chr6 (222-263)||(26356734-26356775)
chr6 (222-263)||(30660982-30661023)
chr6 (264-364)||(20977631-20977730)
chr6 (264-316)||(30492977-30493029)
chr6 (264-311)||(18502972-18503019)
chr6 (27-62)||(22232012-22232047)
chr6 (229-263)||(15721115-15721149)
chr6 (222-260)||(17697440-17697478)
chr6 (229-263)||(20977573-20977607)
chr6 (224-262)||(33744714-33744752)
chr6 (222-263)||(5079558-5079599)
chr6 (222-263)||(5087241-5087282)
chr6 (222-263)||(5974360-5974401)
chr6 (222-263)||(8710038-8710079)
chr6 (222-263)||(12481958-12481999)
chr6 (264-321)||(14256121-14256178)
chr6 (18-55)||(29600829-29600866)
chr6 (222-263)||(30492912-30492953)
chr6 (26-62)||(35091070-35091106)
[»] chr2 (58 HSPs)
chr2 (132-226)||(17795-17889)
chr2 (132-224)||(42565446-42565538)
chr2 (132-224)||(42574070-42574162)
chr2 (132-226)||(24690554-24690648)
chr2 (132-226)||(36735784-36735878)
chr2 (132-226)||(38084031-38084125)
chr2 (132-224)||(15944055-15944147)
chr2 (132-224)||(15952570-15952662)
chr2 (132-224)||(35139069-35139161)
chr2 (132-224)||(35147405-35147497)
chr2 (132-226)||(5870618-5870712)
chr2 (132-226)||(5873760-5873854)
chr2 (132-226)||(11874156-11874250)
chr2 (132-226)||(19883947-19884040)
chr2 (132-224)||(41233340-41233433)
chr2 (132-226)||(18500692-18500780)
chr2 (132-214)||(18972610-18972690)
chr2 (264-370)||(29809176-29809281)
chr2 (266-321)||(3043331-3043386)
chr2 (264-367)||(44286611-44286711)
chr2 (268-370)||(6458413-6458514)
chr2 (264-365)||(35498820-35498919)
chr2 (222-370)||(25666241-25666376)
chr2 (13-62)||(17661-17710)
chr2 (264-321)||(10357583-10357640)
chr2 (264-321)||(25100852-25100909)
chr2 (264-319)||(21439804-21439859)
chr2 (264-370)||(7439488-7439593)
chr2 (264-370)||(13371917-13372022)
chr2 (13-55)||(15952449-15952491)
chr2 (264-318)||(30784443-30784497)
chr2 (13-55)||(35139240-35139282)
chr2 (13-55)||(35147576-35147618)
chr2 (13-55)||(42565325-42565367)
chr2 (13-55)||(42573949-42573991)
chr2 (264-321)||(20721199-20721256)
chr2 (264-365)||(33832051-33832151)
chr2 (13-53)||(24690714-24690754)
chr2 (27-62)||(15943934-15943969)
chr2 (268-370)||(31436309-31436411)
chr2 (264-321)||(31771584-31771642)
chr2 (222-263)||(10357518-10357559)
chr2 (222-263)||(13372046-13372087)
chr2 (264-321)||(18672459-18672516)
chr2 (264-321)||(42274271-42274328)
chr2 (265-321)||(36881289-36881345)
chr2 (332-370)||(8737749-8737787)
chr2 (11-53)||(18972503-18972544)
chr2 (222-264)||(31436240-31436282)
chr2 (222-264)||(33832174-33832216)
chr2 (222-263)||(7439423-7439464)
chr2 (264-321)||(8392304-8392361)
chr2 (222-263)||(18672394-18672435)
chr2 (222-263)||(25100788-25100829)
chr2 (223-263)||(3043412-3043452)
chr2 (276-320)||(20720221-20720265)
chr2 (222-262)||(31771519-31771559)
chr2 (264-320)||(42487639-42487695)
[»] scaffold0039 (2 HSPs)
scaffold0039 (132-226)||(89380-89474)
scaffold0039 (27-55)||(89273-89301)
[»] scaffold0016 (2 HSPs)
scaffold0016 (132-226)||(14563-14657)
scaffold0016 (13-62)||(14742-14791)
[»] chr5 (82 HSPs)
chr5 (132-226)||(20099156-20099250)
chr5 (132-226)||(23377808-23377902)
chr5 (132-226)||(25526645-25526739)
chr5 (132-226)||(25533327-25533421)
chr5 (132-226)||(36448709-36448803)
chr5 (132-226)||(36455093-36455187)
chr5 (132-226)||(15956505-15956599)
chr5 (132-226)||(20092279-20092373)
chr5 (133-226)||(26186158-26186251)
chr5 (132-224)||(28844396-28844488)
chr5 (132-224)||(28853006-28853098)
chr5 (136-228)||(40015354-40015446)
chr5 (132-226)||(20639372-20639466)
chr5 (132-226)||(30249779-30249873)
chr5 (132-226)||(25041776-25041870)
chr5 (132-216)||(10058248-10058333)
chr5 (132-225)||(24956347-24956440)
chr5 (132-224)||(43597561-43597654)
chr5 (132-224)||(43630355-43630448)
chr5 (132-224)||(24964807-24964899)
chr5 (132-226)||(37048822-37048916)
chr5 (132-224)||(1727674-1727767)
chr5 (133-224)||(23349590-23349682)
chr5 (264-365)||(8404321-8404421)
chr5 (264-364)||(17742594-17742694)
chr5 (264-370)||(9687453-9687558)
chr5 (264-321)||(621596-621653)
chr5 (264-321)||(8337110-8337167)
chr5 (264-321)||(10464005-10464062)
chr5 (13-62)||(23377674-23377723)
chr5 (264-321)||(27308087-27308144)
chr5 (264-321)||(34010190-34010247)
chr5 (264-367)||(31211457-31211560)
chr5 (264-370)||(37103300-37103404)
chr5 (264-321)||(8313476-8313533)
chr5 (264-317)||(22023071-22023124)
chr5 (13-62)||(24956227-24956276)
chr5 (13-62)||(24964687-24964736)
chr5 (264-321)||(27335898-27335955)
chr5 (264-365)||(28456776-28456876)
chr5 (264-321)||(34785220-34785277)
chr5 (264-321)||(42877582-42877639)
chr5 (264-320)||(4426290-4426346)
chr5 (264-365)||(4463024-4463127)
chr5 (13-55)||(28844567-28844609)
chr5 (13-55)||(28853177-28853219)
chr5 (264-365)||(1683091-1683192)
chr5 (264-321)||(2004212-2004269)
chr5 (13-54)||(40015560-40015601)
chr5 (26-62)||(1727551-1727587)
chr5 (331-371)||(41192897-41192937)
chr5 (26-62)||(43597439-43597475)
chr5 (26-62)||(43630233-43630269)
chr5 (27-62)||(20099036-20099071)
chr5 (264-319)||(34527286-34527341)
chr5 (13-55)||(23349467-23349509)
chr5 (132-216)||(38227452-38227535)
chr5 (222-263)||(8337046-8337087)
chr5 (222-263)||(9924444-9924485)
chr5 (222-263)||(10463940-10463981)
chr5 (264-321)||(24636908-24636965)
chr5 (264-321)||(26865676-26865733)
chr5 (222-263)||(37103235-37103276)
chr5 (264-321)||(38693436-38693493)
chr5 (273-321)||(9924509-9924557)
chr5 (13-53)||(25041670-25041710)
chr5 (11-51)||(30249941-30249980)
chr5 (16-55)||(20639254-20639293)
chr5 (229-263)||(6365348-6365382)
chr5 (223-261)||(8313412-8313450)
chr5 (264-314)||(37446668-37446718)
chr5 (222-263)||(1683216-1683257)
chr5 (264-321)||(4461932-4461989)
chr5 (264-321)||(18950840-18950896)
chr5 (222-263)||(24636990-24637031)
chr5 (16-53)||(26186054-26186091)
chr5 (230-263)||(27308030-27308063)
chr5 (222-263)||(34785301-34785342)
chr5 (222-263)||(38693517-38693558)
chr5 (264-321)||(40158532-40158589)
chr5 (27-62)||(10058403-10058439)
chr5 (222-262)||(21837142-21837182)
[»] chr4 (53 HSPs)
chr4 (132-226)||(19737520-19737614)
chr4 (132-226)||(20548836-20548930)
chr4 (132-226)||(50188250-50188344)
chr4 (132-226)||(55792744-55792838)
chr4 (132-226)||(3381951-3382045)
chr4 (132-226)||(8657955-8658049)
chr4 (132-226)||(3388697-3388791)
chr4 (132-226)||(39744937-39745031)
chr4 (132-224)||(8093790-8093883)
chr4 (132-224)||(8102595-8102688)
chr4 (133-226)||(38853819-38853912)
chr4 (132-205)||(8817024-8817097)
chr4 (264-365)||(28448317-28448418)
chr4 (264-363)||(33177350-33177448)
chr4 (264-370)||(7617340-7617445)
chr4 (264-365)||(51395540-51395639)
chr4 (264-321)||(53324043-53324100)
chr4 (11-62)||(50188415-50188466)
chr4 (264-370)||(38114159-38114264)
chr4 (264-365)||(22068365-22068466)
chr4 (264-321)||(55938335-55938392)
chr4 (264-364)||(7490961-7491058)
chr4 (139-226)||(18482899-18482985)
chr4 (264-370)||(3862411-3862515)
chr4 (264-370)||(3871168-3871272)
chr4 (264-370)||(47309702-47309807)
chr4 (264-321)||(11670374-11670431)
chr4 (276-365)||(20177772-20177861)
chr4 (264-321)||(13717964-13718021)
chr4 (264-321)||(47463634-47463691)
chr4 (26-62)||(8093668-8093704)
chr4 (26-62)||(8102473-8102509)
chr4 (264-319)||(53571514-53571569)
chr4 (213-263)||(28448442-28448492)
chr4 (222-263)||(3873203-3873244)
chr4 (13-62)||(8816905-8816953)
chr4 (222-263)||(19522915-19522956)
chr4 (264-321)||(30331248-30331305)
chr4 (264-321)||(31316809-31316865)
chr4 (222-263)||(47379227-47379268)
chr4 (222-263)||(53323978-53324019)
chr4 (222-263)||(53423614-53423655)
chr4 (222-262)||(30331330-30331370)
chr4 (331-370)||(3872967-3873006)
chr4 (262-321)||(4850360-4850419)
chr4 (331-365)||(6589099-6589133)
chr4 (224-262)||(44289883-44289921)
chr4 (264-321)||(10321963-10322020)
chr4 (264-321)||(25422334-25422391)
chr4 (222-263)||(31316744-31316785)
chr4 (222-263)||(33177472-33177513)
chr4 (222-263)||(43938206-43938247)
chr4 (222-263)||(47309637-47309678)
[»] chr3 (65 HSPs)
chr3 (132-226)||(4313104-4313198)
chr3 (132-226)||(8606618-8606712)
chr3 (132-226)||(13105152-13105246)
chr3 (132-226)||(23287640-23287734)
chr3 (132-223)||(13111309-13111400)
chr3 (132-226)||(68611-68705)
chr3 (132-226)||(74704-74798)
chr3 (132-226)||(8613079-8613173)
chr3 (132-226)||(9524928-9525022)
chr3 (132-226)||(9554604-9554698)
chr3 (132-226)||(14880824-14880918)
chr3 (132-226)||(14892639-14892733)
chr3 (132-226)||(17934530-17934624)
chr3 (132-226)||(48060242-48060336)
chr3 (132-226)||(14887541-14887635)
chr3 (132-226)||(21638071-21638165)
chr3 (132-226)||(37468484-37468578)
chr3 (132-224)||(8154154-8154247)
chr3 (134-226)||(261815-261907)
chr3 (136-226)||(26386224-26386314)
chr3 (132-224)||(41015813-41015906)
chr3 (132-226)||(11181227-11181319)
chr3 (132-224)||(41007033-41007127)
chr3 (132-226)||(16030828-16030922)
chr3 (132-226)||(16815364-16815454)
chr3 (155-223)||(35491496-35491564)
chr3 (264-365)||(45419712-45419812)
chr3 (264-365)||(40762528-40762627)
chr3 (13-59)||(14887194-14887240)
chr3 (264-321)||(117417-117474)
chr3 (264-317)||(11294062-11294115)
chr3 (276-365)||(29348552-29348640)
chr3 (264-321)||(32943254-32943311)
chr3 (264-321)||(44808809-44808866)
chr3 (264-316)||(23917588-23917640)
chr3 (13-55)||(68784-68826)
chr3 (13-55)||(74877-74919)
chr3 (13-55)||(23287519-23287561)
chr3 (264-370)||(38174170-38174275)
chr3 (142-216)||(44363049-44363123)
chr3 (13-62)||(9524793-9524842)
chr3 (13-62)||(9554468-9554517)
chr3 (132-181)||(12558353-12558402)
chr3 (13-57)||(48060122-48060166)
chr3 (267-370)||(53517706-53517808)
chr3 (222-263)||(25250217-25250258)
chr3 (264-321)||(50615054-50615111)
chr3 (264-320)||(11045672-11045727)
chr3 (27-62)||(17934708-17934743)
chr3 (331-365)||(14525122-14525156)
chr3 (13-55)||(14880703-14880745)
chr3 (13-55)||(14892518-14892560)
chr3 (224-262)||(39562601-39562639)
chr3 (13-55)||(44362918-44362960)
chr3 (222-260)||(45406866-45406904)
chr3 (224-262)||(46295258-46295296)
chr3 (13-62)||(11181405-11181453)
chr3 (222-263)||(21749769-21749810)
chr3 (334-371)||(28260538-28260575)
chr3 (222-263)||(37179145-37179186)
chr3 (264-321)||(44557549-44557606)
chr3 (222-263)||(45419836-45419877)
chr3 (222-262)||(11293997-11294037)
chr3 (13-53)||(26386113-26386153)
chr3 (222-262)||(38174105-38174145)
[»] scaffold0027 (1 HSPs)
scaffold0027 (132-228)||(24046-24142)
[»] chr8 (65 HSPs)
chr8 (132-226)||(32007195-32007289)
chr8 (132-224)||(39845122-39845214)
chr8 (132-226)||(22162499-22162592)
chr8 (132-224)||(39837080-39837172)
chr8 (132-223)||(32000229-32000320)
chr8 (132-226)||(22156496-22156589)
chr8 (132-226)||(25858778-25858872)
chr8 (132-226)||(32025161-32025255)
chr8 (132-224)||(30938758-30938851)
chr8 (163-226)||(25852562-25852625)
chr8 (264-370)||(25101882-25101987)
chr8 (136-216)||(13386096-13386176)
chr8 (264-370)||(5250310-5250415)
chr8 (264-370)||(36470745-36470850)
chr8 (265-365)||(8784845-8784944)
chr8 (264-320)||(30658424-30658480)
chr8 (266-321)||(12469467-12469522)
chr8 (276-370)||(27875366-27875460)
chr8 (267-365)||(41590265-41590361)
chr8 (264-321)||(5695881-5695938)
chr8 (264-365)||(6590532-6590632)
chr8 (264-365)||(30968930-30969029)
chr8 (264-321)||(37967803-37967860)
chr8 (264-321)||(44265714-44265771)
chr8 (264-367)||(43622715-43622816)
chr8 (267-365)||(6018308-6018403)
chr8 (13-55)||(39836959-39837001)
chr8 (13-55)||(39845001-39845043)
chr8 (264-321)||(18839886-18839943)
chr8 (276-321)||(28015596-28015641)
chr8 (264-316)||(36063409-36063461)
chr8 (275-321)||(17062246-17062292)
chr8 (275-321)||(17586066-17586112)
chr8 (264-370)||(42499300-42499406)
chr8 (222-263)||(6590467-6590508)
chr8 (264-317)||(17842729-17842782)
chr8 (264-317)||(18304638-18304691)
chr8 (264-321)||(35863307-35863364)
chr8 (276-321)||(38706411-38706456)
chr8 (222-263)||(42499429-42499470)
chr8 (264-321)||(43936485-43936541)
chr8 (264-299)||(23483610-23483645)
chr8 (264-319)||(39337246-39337301)
chr8 (224-262)||(5765766-5765804)
chr8 (224-262)||(28755225-28755263)
chr8 (264-318)||(35369456-35369510)
chr8 (222-260)||(36470877-36470915)
chr8 (222-263)||(5695962-5696003)
chr8 (222-263)||(6018240-6018281)
chr8 (264-317)||(21135589-21135642)
chr8 (132-205)||(21640609-21640681)
chr8 (222-263)||(23483545-23483586)
chr8 (222-263)||(24451685-24451726)
chr8 (222-263)||(27875496-27875537)
chr8 (222-263)||(28015677-28015718)
chr8 (264-321)||(33322799-33322856)
chr8 (222-263)||(35863242-35863283)
chr8 (230-263)||(37967745-37967778)
chr8 (222-263)||(38706492-38706533)
chr8 (264-321)||(41281270-41281327)
chr8 (222-263)||(44265649-44265690)
chr8 (334-370)||(547337-547373)
chr8 (264-320)||(24451750-24451806)
chr8 (27-55)||(32000399-32000427)
chr8 (230-262)||(33322742-33322774)
[»] chr7 (61 HSPs)
chr7 (132-226)||(6851522-6851616)
chr7 (134-226)||(46461629-46461721)
chr7 (132-226)||(28415591-28415685)
chr7 (132-226)||(20542412-20542505)
chr7 (132-224)||(18303899-18303992)
chr7 (132-226)||(1858081-1858175)
chr7 (152-226)||(43005217-43005291)
chr7 (132-224)||(12978931-12979024)
chr7 (132-224)||(13831954-13832047)
chr7 (132-224)||(13839984-13840077)
chr7 (133-226)||(44412824-44412918)
chr7 (132-226)||(46299433-46299526)
chr7 (132-226)||(4831856-4831949)
chr7 (264-365)||(27727152-27727253)
chr7 (171-226)||(34138683-34138738)
chr7 (264-370)||(6331164-6331269)
chr7 (264-370)||(7238498-7238603)
chr7 (264-321)||(38159220-38159277)
chr7 (264-321)||(43597454-43597511)
chr7 (264-320)||(29155933-29155989)
chr7 (174-226)||(34132374-34132426)
chr7 (264-370)||(22378380-22378485)
chr7 (264-321)||(14990518-14990575)
chr7 (264-321)||(15420129-15420186)
chr7 (264-321)||(43083825-43083882)
chr7 (264-319)||(3495911-3495966)
chr7 (264-370)||(4926643-4926748)
chr7 (13-55)||(34138533-34138575)
chr7 (264-321)||(1962166-1962223)
chr7 (264-321)||(6588955-6589012)
chr7 (264-321)||(18059272-18059328)
chr7 (26-62)||(18303792-18303828)
chr7 (20-67)||(18156628-18156675)
chr7 (27-62)||(34132236-34132271)
chr7 (222-263)||(18059209-18059250)
chr7 (189-226)||(22347309-22347346)
chr7 (264-321)||(33625053-33625110)
chr7 (222-263)||(38159155-38159196)
chr7 (264-321)||(38199317-38199373)
chr7 (222-263)||(43597535-43597576)
chr7 (264-321)||(44167764-44167821)
chr7 (264-321)||(46044261-46044318)
chr7 (13-59)||(4831762-4831808)
chr7 (222-260)||(4926578-4926616)
chr7 (132-166)||(34138654-34138688)
chr7 (264-313)||(4899842-4899891)
chr7 (222-263)||(6331099-6331140)
chr7 (222-263)||(7238627-7238668)
chr7 (264-321)||(11396928-11396985)
chr7 (222-263)||(15130913-15130954)
chr7 (132-205)||(25831800-25831873)
chr7 (222-263)||(35482110-35482151)
chr7 (222-263)||(44081161-44081202)
chr7 (276-321)||(45958696-45958741)
chr7 (222-263)||(46044342-46044383)
chr7 (222-263)||(46331002-46331043)
chr7 (189-217)||(7528458-7528486)
chr7 (333-365)||(10463223-10463255)
chr7 (13-53)||(20542292-20542332)
chr7 (222-262)||(33624990-33625030)
chr7 (275-311)||(35482039-35482075)
[»] chr1 (46 HSPs)
chr1 (132-226)||(2416213-2416307)
chr1 (132-226)||(44832062-44832156)
chr1 (133-228)||(19367922-19368017)
chr1 (132-226)||(47108834-47108928)
chr1 (132-226)||(20429818-20429913)
chr1 (132-226)||(15473376-15473470)
chr1 (132-224)||(31540430-31540523)
chr1 (132-224)||(31548999-31549092)
chr1 (132-224)||(3432410-3432501)
chr1 (133-226)||(51968390-51968483)
chr1 (264-321)||(30719748-30719805)
chr1 (13-62)||(19368089-19368138)
chr1 (264-365)||(21794602-21794701)
chr1 (264-321)||(26805461-26805518)
chr1 (264-321)||(35531054-35531111)
chr1 (273-365)||(28701192-28701284)
chr1 (264-370)||(46517093-46517199)
chr1 (264-321)||(12368213-12368270)
chr1 (264-321)||(36248592-36248649)
chr1 (264-317)||(29231375-29231428)
chr1 (264-321)||(33708915-33708972)
chr1 (264-365)||(43505035-43505135)
chr1 (13-62)||(47110405-47110454)
chr1 (273-321)||(15053896-15053944)
chr1 (13-53)||(20429979-20430019)
chr1 (264-316)||(37986719-37986771)
chr1 (262-317)||(26020373-26020428)
chr1 (264-321)||(11999986-12000043)
chr1 (222-263)||(30719683-30719724)
chr1 (222-263)||(43504970-43505011)
chr1 (222-263)||(46517223-46517264)
chr1 (222-263)||(51561398-51561439)
chr1 (264-321)||(52493797-52493854)
chr1 (285-365)||(47008603-47008682)
chr1 (267-317)||(2059615-2059665)
chr1 (222-264)||(26020449-26020491)
chr1 (224-262)||(31400425-31400463)
chr1 (264-321)||(10041210-10041267)
chr1 (264-321)||(19791506-19791563)
chr1 (132-205)||(23191469-23191542)
chr1 (265-314)||(33707346-33707395)
chr1 (222-263)||(33708996-33709037)
chr1 (276-321)||(36367860-36367905)
chr1 (222-263)||(39681998-39682039)
chr1 (222-263)||(47008698-47008739)
chr1 (222-263)||(52493731-52493772)
[»] scaffold0096 (1 HSPs)
scaffold0096 (132-217)||(893-978)
[»] scaffold0031 (2 HSPs)
scaffold0031 (132-216)||(33233-33317)
scaffold0031 (11-62)||(33112-33162)
[»] scaffold0119 (1 HSPs)
scaffold0119 (132-226)||(39725-39818)
[»] scaffold0046 (1 HSPs)
scaffold0046 (132-226)||(86204-86298)
[»] scaffold0043 (2 HSPs)
scaffold0043 (132-226)||(32737-32831)
scaffold0043 (16-62)||(32620-32666)
[»] scaffold1699 (2 HSPs)
scaffold1699 (132-224)||(901-993)
scaffold1699 (27-62)||(780-815)
[»] scaffold0085 (3 HSPs)
scaffold0085 (154-226)||(7323-7395)
scaffold0085 (132-182)||(18257-18307)
scaffold0085 (13-53)||(18151-18191)
[»] scaffold0306 (1 HSPs)
scaffold0306 (132-226)||(16109-16204)
[»] scaffold0028 (1 HSPs)
scaffold0028 (132-226)||(66269-66364)
[»] scaffold0301 (2 HSPs)
scaffold0301 (132-226)||(9365-9459)
scaffold0301 (11-53)||(9525-9566)
[»] scaffold0445 (2 HSPs)
scaffold0445 (262-370)||(5839-5946)
scaffold0445 (222-263)||(5968-6009)
[»] scaffold0351 (2 HSPs)
scaffold0351 (135-226)||(7125-7217)
scaffold0351 (13-55)||(6999-7041)
[»] scaffold1190 (1 HSPs)
scaffold1190 (264-365)||(129-229)
[»] scaffold1160 (2 HSPs)
scaffold1160 (264-321)||(1428-1484)
scaffold1160 (222-261)||(1363-1402)
[»] scaffold0514 (2 HSPs)
scaffold0514 (275-365)||(6108-6197)
scaffold0514 (222-261)||(6227-6266)
[»] scaffold0036 (1 HSPs)
scaffold0036 (264-370)||(17299-17404)
[»] scaffold0097 (2 HSPs)
scaffold0097 (264-321)||(25027-25084)
scaffold0097 (276-320)||(24059-24103)
[»] scaffold0003 (1 HSPs)
scaffold0003 (273-321)||(239982-240030)
[»] scaffold0385 (1 HSPs)
scaffold0385 (264-319)||(9932-9987)
[»] scaffold0571 (1 HSPs)
scaffold0571 (276-370)||(8733-8824)
[»] scaffold0001 (2 HSPs)
scaffold0001 (264-318)||(158001-158055)
scaffold0001 (222-263)||(158078-158119)
[»] scaffold1191 (1 HSPs)
scaffold1191 (264-321)||(937-994)
[»] scaffold0651 (2 HSPs)
scaffold0651 (264-321)||(6833-6889)
scaffold0651 (222-263)||(6913-6954)
[»] scaffold0562 (2 HSPs)
scaffold0562 (222-263)||(4022-4063)
scaffold0562 (331-370)||(3786-3825)
[»] scaffold0640 (1 HSPs)
scaffold0640 (224-262)||(3944-3982)
[»] scaffold0809 (1 HSPs)
scaffold0809 (264-321)||(729-786)
[»] scaffold0125 (1 HSPs)
scaffold0125 (222-263)||(21801-21842)
[»] scaffold0065 (1 HSPs)
scaffold0065 (132-197)||(43751-43815)
[»] scaffold0092 (1 HSPs)
scaffold0092 (26-58)||(14479-14511)


Alignment Details
Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 22778631 - 22778725
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22778631 gttctttgacaactcaatagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 22778725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 22764382 - 22764476
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22764382 gttctttgacaactcaatagaacttttggtgtctgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaatt 22764476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 25506040 - 25506134
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25506040 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 25506134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 19714240 - 19714146
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19714240 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 19714146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 19899508 - 19899414
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19899508 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 19899414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 26897002 - 26896909
Alignment:
Q  133 ttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26897002 ttctttgacaactcaagagaacttttggtgtttgaaattgtgtggaatgagggctctatttattggtgaggaggttgatgaaaaatggaaaatt 26896909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 19720396 - 19720302
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  19720396 gttctttgactactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtcaggagtttgatgaaaaaaggaaaatt 19720302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 22232119 - 22232213
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||    
T  22232119 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctatatttataggtggagaggttgatgaaaaaaggaaaatt 22232213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 12667066 - 12667140
Alignment:
Q  152 aacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12667066 aacttttgatgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 12667140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 20452159 - 20452253
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||| |||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  20452159 gttcattgacaactcaagagaacttttggtgtgtgtaattgtgtggaatgatggctctatttataggtgaggaagttgatgaaaaaaggaaaatt 20452253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 28702398 - 28702492
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||    
T  28702398 gttctttgacaactcaagagaactttttgtgtgtgaaattgtgtggaataagagctctatttataggtgaggagtttgatgaaaaaaggaaaatt 28702492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 30824036 - 30824129
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  30824036 gttctttgacaactcaagagaactttttggtgtgtcaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 30824129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 35091176 - 35091269
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  35091176 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 35091269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 3917102 - 3917198
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgt----gaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||||||||||    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  3917102 gttctttgacaactcaagagaacttttggtgtgtacgtgaaattgtgtggaatgagggctctatttatagatgaggaggttgatgaaaaaaggaaaa 3917198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 10984589 - 10984670
Alignment:
Q  136 tttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaa 217  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  10984589 tttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttatatgtgaggagtttgataaaaaa 10984670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 20458976 - 20459070
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| || |||||||| | ||||||    
T  20458976 gttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggaatgagggctctatttatatgtgatgagttttatgaaaaaagaaaaatt 20459070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 5974336 - 5974233
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  5974336 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaattttttttttgtacggactaaaaaacctattaaaattaagta 5974237  T
Q  364 agaa 367  Q
    ||||    
T  5974236 agaa 5974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 15721089 - 15720984
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  15721089 aagagtttaaggataattaaacaaactttgttgtaataaggactaaaattagaagtaattcttttt-tgtagggacttaaaaatctattaaaattaagta 15720991  T
Q  364 agaatta 370  Q
    || ||||    
T  15720990 aggatta 15720984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 367
Target Start/End: Original strand, 8710103 - 8710209
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa---nnnnnnnnctgtagggactgaaaaacctattaaaattaa 360  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||            |||||||||| |||||||||||||||||||    
T  8710103 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaattttttttttgttgtagggactaaaaaacctattaaaattaa 8710202  T
Q  361 gtaagaa 367  Q
    |||||||    
T  8710203 gtaagaa 8710209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 18909638 - 18909546
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | || |||| | |||| |||||||| || ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  18909638 gttctttgacaactcaagagaattttttg-gtgtcaaattgtgagggatgagggctctatttataggtgaagaggttgatg-aaaatggaaaatt 18909546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 22732024 - 22731919
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  22732024 aagagtttaagaataattaaacaaactttgttgtaacagggactaaaattagaagtaatatttttt-tgtaaggactaaaaaacctattaaaattaagta 22731926  T
Q  364 agaatta 370  Q
    || ||||    
T  22731925 aggatta 22731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 12482023 - 12482080
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12482023 aagagtttaaggataattaaacaaattttgttgtaatagggactaaaattagaagtaa 12482080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 29691938 - 29691881
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29691938 aagagtttaaggataattaaacaaactttgttgtagtagggactaaaattagaagtaa 29691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 10984450 - 10984504
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaatagac 67  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  10984450 aagggacaaaaattaccgaagggacaaaattccaaagggacttttccgaagagac 10984504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 16736679 - 16736574
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||| |||||| ||| |||  ||||||||||||||||         |||||||||| ||||||||||||||||||||||    
T  16736679 aagagtttaaggataattaaacaaattttgttttaacagggcctaaaattagaagtaattcttttt-tgtagggactaaaaaacctattaaaattaagta 16736581  T
Q  364 agaatta 370  Q
    || ||||    
T  16736580 aggatta 16736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 1821247 - 1821300
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  1821247 aagagtttaaagataattaaacaaactttgttgtaataggaactaacattagaa 1821300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 10915571 - 10915679
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnct--gtagggactgaaaaacctattaaaattaag 361  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||| ||||||          |  ||||||||| ||||||||||||||||||||    
T  10915571 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattcgaagtattttttttttttagtagggactaaaaaacctattaaaattaag 10915670  T
Q  362 taagaatta 370  Q
    |||| ||||    
T  10915671 taaggatta 10915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 17697413 - 17697356
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||||||||||||   |||||||||||||||||    
T  17697413 aagagtttaaggataattaaacaaactttgttgtaataaagactaaaattagaagtaa 17697356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 26356799 - 26356856
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  26356799 aagagtttaaggataattaaacaaactttgctgtaacagggactaaaattagaagtaa 26356856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 29600943 - 29601002
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctat 191  Q
    ||||||||||||||||| | || |||| ||||||||||||||| ||||||||||||||||    
T  29600943 gttctttgacaactcaagagaaattttagtgtgtgaaattgtgaggaatgagggctctat 29601002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 5087217 - 5087167
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaatta 314  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  5087217 aagagtttaaggataattaaacaaactttgttgtagtagggactaaaatta 5087167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 25505919 - 25505961
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  25505919 aagggacaaaaattaccgaagggacaaaattccgaagggactt 25505961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 17245848 - 17245905
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| | |||||||||||||||    
T  17245848 aagagtttaaggataattaaacaaactttgttttagtagggattaaaattagaagtaa 17245905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20897838 - 20897781
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||| ||||||    
T  20897838 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattaaaagtaa 20897781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 22778511 - 22778556
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaagggacttt 56  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  22778511 caaagggacaaaaattaccgaaggaacaaaattccgaagggacttt 22778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 26897122 - 26897074
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  26897122 aagggacaaaatt-atcgaagggacaaaattccgaagggacttttccgaa 26897074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 28002396 - 28002323
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggag 205  Q
    ||||||||||| ||||| | || |||| || |||||||||||||||||||   |||||||||||||||||||||    
T  28002396 gttctttgacagctcaagagaattttttgtatgtgaaattgtgtggaatgtcagctctatttataggtgaggag 28002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 30661047 - 30661104
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||    
T  30661047 aagagtttaagtataattaaacaaaatttgttgtaacagggactaaaattagaagtaa 30661104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 28702292 - 28702332
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28702292 aagggacaaaaattaccgaagggacaaaattccgaagggac 28702332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 30823913 - 30823949
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  30823913 taccgaagggacaaaattccgaagggacttttccgaa 30823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 12666942 - 12666977
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  12666942 accgaagggacaaaattccgaagggacttttccgaa 12666977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 34046655 - 34046710
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  34046655 aagaatttaaggataattaaacaaactttgttttagtagggactaaaattagaagt 34046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 20452039 - 20452081
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  20452039 aagggacaaaaatcaccgaagggacaaaattccgaagggactt 20452081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 20458856 - 20458898
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  20458856 aagggacaaaaatcaccgaagggacaaaattccgaagggactt 20458898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 20510747 - 20510834
Alignment:
Q  275 gataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    |||||||||||||||||| |||||| ||| ||||||| |||||||||         |||||||||| ||||||||||||||||||||||||    
T  20510747 gataattaaacaaactttattgtaacagggactaaaactagaagtaattttttt--tgtagggact-aaaaacctattaaaattaagtaag 20510834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 844310 - 844351
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  844310 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 844351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 5079533 - 5079476
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||| ||| ||||||||| ||||||||||||| ||  |||||||||||||||||||||    
T  5079533 aagactttaaggataatttaacaaactttgttttagcaggaactaaaattagaagtaa 5079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 10915506 - 10915547
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  10915506 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 10915547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 12663298 - 12663257
Alignment:
Q  14 agggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  12663298 agggacaaaaaataccgaagggacaaaattccgaagggactt 12663257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 22764262 - 22764307
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaagggacttt 56  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||    
T  22764262 caaagggacaaaaattaccgaaggaacaaaatttcgaagggacttt 22764307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 26356734 - 26356775
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  26356734 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 26356775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 30660982 - 30661023
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  30660982 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 30661023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 20977631 - 20977730
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||| |||||||||||||| | ||  ||| |||||||||||||||||         |||||||||| |||||||||||| |||||||||    
T  20977631 aagagtttaaggatagttaaacaaactttgctttagcagggactaaaattagaagtaatttttttt-tgtagggactaaaaaacctattataattaagta 20977729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 30492977 - 30493029
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattaga 316  Q
    |||||||| ||||||||||||||||||| |||||| |||  ||||||||||||    
T  30492977 aagagtttaaggataattaaacaaacttagttgtagtagagactaaaattaga 30493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 18503019 - 18502972
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaa 311  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||    
T  18503019 aagagtttaaggataattaaacaaactttgttttagtagggactaaaa 18502972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 22232012 - 22232047
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||| |||||    
T  22232012 accgaagggacaaaattccgaagggactttcccgaa 22232047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 15721149 - 15721115
Alignment:
Q  229 agtaaatgaacctttcatagttttctaaacttgtc 263  Q
    ||||||||||||||||||||| |||||||||||||    
T  15721149 agtaaatgaacctttcatagtgttctaaacttgtc 15721115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 260
Target Start/End: Complemental strand, 17697478 - 17697440
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaactt 260  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  17697478 aaattttagtaaatgaacctttcatagtgttctaaactt 17697440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 20977573 - 20977607
Alignment:
Q  229 agtaaatgaacctttcatagttttctaaacttgtc 263  Q
    ||||||||||||||||||||| |||||||||||||    
T  20977573 agtaaatgaacctttcatagtgttctaaacttgtc 20977607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 33744752 - 33744714
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  33744752 attttagtaaatgaacctttcatagtgttctaaacttgt 33744714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 5079599 - 5079558
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  5079599 aaattttagtaattgaacctttcatagtgttctaaacttgtc 5079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 5087282 - 5087241
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||| ||||||||| |||||||||||||    
T  5087282 aaattttagtaaatgaacatttcatagtgttctaaacttgtc 5087241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 5974401 - 5974360
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||| ||||||||||||||||| |||||||||||||    
T  5974401 aaattttagttaatgaacctttcatagtattctaaacttgtc 5974360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 8710038 - 8710079
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||| ||||||||||||||||| |||||||||||||    
T  8710038 aaattttagttaatgaacctttcatagtattctaaacttgtc 8710079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 12481958 - 12481999
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| || |||||||||||||||||| |||||||||||||    
T  12481958 aaattttagcaaatgaacctttcatagtgttctaaacttgtc 12481999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 14256178 - 14256121
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||| ||| |||||||||||||||||||| ||||  || | |||||||||||||||||    
T  14256178 aagaatttaaggataattaaacaaacttttttgttttatggactaaaattagaagtaa 14256121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 29600829 - 29600866
Alignment:
Q  18 acaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  29600829 acaaaaattaccgaagggacaaaatttcgaagggactt 29600866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 30492912 - 30492953
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| |||||||||||| |||||||| |||||||||||||    
T  30492912 aaattttagtaaatgaacccttcatagtgttctaaacttgtc 30492953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 35091070 - 35091106
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  35091070 taccgaaaggataaaattccgaagggacttttccgaa 35091106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 17795 - 17889
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17795 gttctttgacaactcaatagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 17889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 42565446 - 42565538
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42565446 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 42565538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 42574070 - 42574162
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42574070 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 42574162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 24690648 - 24690554
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24690648 gttctttgacaactcaagagaactttttgtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 24690554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 36735878 - 36735784
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36735878 gttctttgacaactcaagagaacttttggtatgtgaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 36735784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 38084031 - 38084125
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  38084031 gttcttttacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 38084125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 15944055 - 15944147
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15944055 gttctttgacaactcaagagaacttttggtgtgtgcaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 15944147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 15952570 - 15952662
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15952570 gttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 15952662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 35139161 - 35139069
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  35139161 gttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 35139069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 35147497 - 35147405
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  35147497 gttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 35147405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 5870618 - 5870712
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||    
T  5870618 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaagaggttgatgaagaaaggaaaatt 5870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 5873760 - 5873854
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||    
T  5873760 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaagaggttgatgaagaaaggaaaatt 5873854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 11874250 - 11874156
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  11874250 gttctttgacaactcaagagaactttttgtgtgtgaaattgtgtggaatgagggctccatttataggtgaggaggttgatgaaaaaatgaaaatt 11874156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 19883947 - 19884040
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  19883947 gttctttgacaactcaaaagaacttttggtgtgtgaaattttgtggaatgagagctctatttataggtgaggaggttgatg-aaaatggaaaatt 19884040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 41233340 - 41233433
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41233340 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 41233433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 18500780 - 18500692
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||| ||||||||    
T  18500780 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctc------taggtgaggagtttgatgaaaaaaggaaaatt 18500692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 18972610 - 18972690
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaa 214  Q
    ||||||||||||||||| | ||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18972610 gttctttgacaactcaagagaacttttggtgtc--aaattgtgtggaatgaaggctctatttataggtgaggaggttgatgaa 18972690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 29809281 - 29809176
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||        ||||| ||||| ||||||||||||||||||||||    
T  29809281 aagagtttaaggataattaaacaaactttgttgtaacatggactaaaattagaagtaa-ttcttttctgtatggactaaaaaacctattaaaattaagta 29809183  T
Q  364 agaatta 370  Q
    || ||||    
T  29809182 aggatta 29809176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 3043386 - 3043331
Alignment:
Q  266 gagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3043386 gagtttaaggataattaaacaaactttgttgtaacaggaactaaaattagaagtaa 3043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 44286711 - 44286611
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||         |||||||| | ||||||||||||||||||| ||    
T  44286711 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattataagtaatttttt---tgtagggattaaaaaacctattaaaattaatta 44286615  T
Q  364 agaa 367  Q
    ||||    
T  44286614 agaa 44286611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 370
Target Start/End: Original strand, 6458413 - 6458514
Alignment:
Q  268 gttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaagaa 367  Q
    |||| ||||||||||||||||||||||||||| | | ||||||||||||||| |         |||||||||| ||||||||||||||||||||||||||    
T  6458413 gtttaaggataattaaacaaactttgttgtaacatggactaaaattagaagt-atttttttcttgtagggactaaaaaacctattaaaattaagtaagaa 6458511  T
Q  368 tta 370  Q
    |||    
T  6458512 tta 6458514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 35498820 - 35498919
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||||||||| |||| | | |||||||||||||||||         |||||||||| ||||||||||||||||||||||    
T  35498820 aagagtttaaggataattaaacaaactttgtcgtaacaaggactaaaattagaagtaattttttt--tgtagggactaaaaaacctattaaaattaagta 35498917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 370
Target Start/End: Original strand, 25666241 - 25666376
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtcaagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||| ||||||||||||||||||||| ||||||||||||||            ||||||||||||||||||||||||||  |||||||||||||||||    
T  25666241 aaattttagtaaatgaacctttcatagtgttctaaacttgtca------------taattaaacaaactttgttgtaatagagactaaaattagaagtaa 25666328  T
Q  322 nnnnnnnnctgtagggactgaaaaacctattaaaattaagtaagaatta 370  Q
             |||||||||| ||||| ||||||||||||| |||| ||||    
T  25666329 ttcttttt-tgtagggactaaaaaatctattaaaattaaataaggatta 25666376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 17661 - 17710
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  17661 aagggacaaaaattaccgaatggacaaaattccgaagggacttttccgaa 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 10357583 - 10357640
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | ||||||||||||||||||||||||||||| | |||||||||||||||    
T  10357583 aagagtttaaagataattaaacaaactttgttgtaatagggattaaaattagaagtaa 10357640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 25100852 - 25100909
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  25100852 aagagtttaaggataattaaacaaactttgttgtaacagggactgaaattagaagtaa 25100909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 21439859 - 21439804
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  21439859 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagt 21439804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 7439488 - 7439593
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| || |||||||||||||||||||||||| ||  |||||||||||||||||         |||||||| | ||||||||||| ||||||||||    
T  7439488 aagagtttaagaataattaaacaaactttgttgtaacagagactaaaattagaagtaattattttt-tgtagggattaaaaaacctatttaaattaagta 7439586  T
Q  364 agaatta 370  Q
    || ||||    
T  7439587 aggatta 7439593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 13372022 - 13371917
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||  ||| | ||| |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  13372022 aagagtttaaggataattaaacaaactttagtgttacagggactaaaattagaagtaattcttttt-tgtatggactaaaaaacctattaaaattaagta 13371924  T
Q  364 agaatta 370  Q
    || ||||    
T  13371923 aggatta 13371917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15952449 - 15952491
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  15952449 aagggacaaaaattaccgaagggacaaaattccgaagggactt 15952491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 30784443 - 30784497
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaag 318  Q
    |||| ||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  30784443 aagaattttaggataattaaacaaactttgttgtaacatggactaaaattagaag 30784497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 35139282 - 35139240
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  35139282 aagggacaaaaattaccgaagggacaaaattccgaagggactt 35139240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 35147618 - 35147576
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  35147618 aagggacaaaaattaccgaagggacaaaattccgaagggactt 35147576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 42565325 - 42565367
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  42565325 aagggacaaaaattaccgaagggacaaaattccgaagggactt 42565367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 42573949 - 42573991
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  42573949 aagggacaaaaattaccgaagggacaaaattccgaagggactt 42573991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20721256 - 20721199
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | ||||||||||||||||||||| || |||| |||||||||||||||||    
T  20721256 aagagtttaacgataattaaacaaactttgttttagtagggactaaaattagaagtaa 20721199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 33832151 - 33832051
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||| ||||||| |||| | | |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  33832151 aagagtttaaggataattaaacagactttgtcgtaacaaggactaaaattagaagtaatttttttt-tgtatggactaaaaaacctattaaaattaagta 33832053  T
Q  364 ag 365  Q
    ||    
T  33832052 ag 33832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 24690754 - 24690714
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24690754 aagggacaaaaattaccgaagggacaaaattccgaagggac 24690714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 15943934 - 15943969
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  15943934 accgaagggacaaaattccgaagggacttttccgaa 15943969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 370
Target Start/End: Original strand, 31436309 - 31436411
Alignment:
Q  268 gttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaagaa 367  Q
    |||| ||||||||||||||||||||||  ||| | | |||||||||||||||||         | |||||||  |||||||||||||||||||||||| |    
T  31436309 gtttaaggataattaaacaaactttgtcataacaaggactaaaattagaagtaattttttttttatagggaccaaaaaacctattaaaattaagtaagga 31436408  T
Q  368 tta 370  Q
    |||    
T  31436409 tta 31436411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 31771584 - 31771642
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaata-ggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||| | || |||||||||||||||||    
T  31771584 aagagtttaaggataattaaacaaactttgttttaacaggggactaaaattagaagtaa 31771642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 10357518 - 10357559
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  10357518 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 10357559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 13372087 - 13372046
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  13372087 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 13372046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 18672459 - 18672516
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||  |||||||||||||||||    
T  18672459 aagagtttaaggataattaaacaaactttgttttagcagtgactaaaattagaagtaa 18672516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 42274328 - 42274271
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||| ||||||||||  || ||||||| |||||||||    
T  42274328 aagagtttaaggataattaaacaaattttgttgtaactgggactaaaactagaagtaa 42274271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 36881289 - 36881345
Alignment:
Q  265 agagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    ||||||| |||||||||||| ||| |||||||||| ||  |||||||||||||||||    
T  36881289 agagtttaaggataattaaataaattttgttgtaacagagactaaaattagaagtaa 36881345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 8737787 - 8737749
Alignment:
Q  332 gtagggactgaaaaacctattaaaattaagtaagaatta 370  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  8737787 gtagggactaaaaaacctattaaaattaagtaaggatta 8737749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 18972503 - 18972544
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  18972503 caaagggagaaaatt-accgaagggacaaaattccgaagggac 18972544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 31436240 - 31436282
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtca 264  Q
    |||||| ||||||||||||||||||||| || |||||||||||    
T  31436240 aaattttagtaaatgaacctttcatagtgttataaacttgtca 31436282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 33832216 - 33832174
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtca 264  Q
    |||||| ||||||||||||||||||||| || |||||||||||    
T  33832216 aaattttagtaaatgaacctttcatagtgttataaacttgtca 33832174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 7439423 - 7439464
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| | ||||||||||||||||||| |||||||||||||    
T  7439423 aaattttactaaatgaacctttcatagtgttctaaacttgtc 7439464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 8392361 - 8392304
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||| |||||| ||  ||| |||||||||| ||||||    
T  8392361 aagagtttaaggataattaaacaaattttgttttagcagggactaaaattataagtaa 8392304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 18672394 - 18672435
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  18672394 aaattttagtaattgaacctttcatagtgttctaaacttgtc 18672435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 25100788 - 25100829
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  25100788 aaattttagtaagtgaacctttcatagtgttctaaacttgtc 25100829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 3043452 - 3043412
Alignment:
Q  223 aatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    ||||| ||||||||||||||||||| | |||||||||||||    
T  3043452 aattttagtaaatgaacctttcatattgttctaaacttgtc 3043412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 20720221 - 20720265
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||||||||||||||| ||  ||| ||||||||||||||||    
T  20720221 ataattaaacaaactttgttttagaagggactaaaattagaagta 20720265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 31771519 - 31771559
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||| |||||||||| |||||||||| ||||||||||||    
T  31771519 aaattttagtaaatgaaactttcatagtgttctaaacttgt 31771559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 42487695 - 42487639
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||| | |||||| |||||||||||||| ||  ||| ||||||||||||||||    
T  42487695 aagagtttaaagataatcaaacaaactttgttttagcagggactaaaattagaagta 42487639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 89380 - 89474
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  89380 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 89474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 89273 - 89301
Alignment:
Q  27 accgaagggacaaaattccgaagggactt 55  Q
    |||||||||||||||||||||||||||||    
T  89273 accgaagggacaaaattccgaagggactt 89301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 14657 - 14563
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14657 gttctttgacaactcaatagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 14791 - 14742
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14791 aagggacaaaaattaccgaagggacaaaattccgaagggacttttccgaa 14742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 20099156 - 20099250
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20099156 gttctttgacaactcaatagaacttttggtgcgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 20099250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 23377808 - 23377902
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23377808 gttctttgacaactcaatagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 23377902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 25526739 - 25526645
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25526739 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 25526645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 25533421 - 25533327
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25533421 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 25533327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 36448803 - 36448709
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36448803 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 36448709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 36455187 - 36455093
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36455187 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 36455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 15956505 - 15956599
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15956505 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgaaggctctatttataggtgaggaggttgatgaaaaatggaaaatt 15956599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 20092279 - 20092373
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20092279 gttctttgacaactcaatagaacttttggtgcgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgtaaaatggaaaatt 20092373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 26186158 - 26186251
Alignment:
Q  133 ttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26186158 ttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggttctatttataggtgaggaggttgatgaaaaatggaaaatt 26186251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 28844488 - 28844396
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28844488 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 28844396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 28853098 - 28853006
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28853098 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 28853006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 40015446 - 40015354
Alignment:
Q  136 tttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatttg 228  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40015446 tttgacaactcaagataacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatttg 40015354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 20639372 - 20639466
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20639372 gttctttgacaattcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaatt 20639466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 30249873 - 30249779
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  30249873 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaataagggctctatttataggtgaggaggttgatgaaaaatgaaaaatt 30249779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 25041776 - 25041870
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  25041776 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgatagctctatttataggtgaggaggttgatgaaaaaaggaaaatt 25041870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 10058333 - 10058248
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaa 216  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058333 gttctttgacaactcaatagaactttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaa 10058248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 24956347 - 24956440
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaat 225  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  24956347 gttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaat 24956440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 43597561 - 43597654
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43597561 gttctttgacaactcaagagaactttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 43597654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 43630355 - 43630448
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43630355 gttctttgacaactcaagagaactttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 43630448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 24964807 - 24964899
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24964807 gttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 24964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 37048916 - 37048822
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||    
T  37048916 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgagaaggttgatgaagaaaggaaaatt 37048822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 1727674 - 1727767
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1727674 gttctttgacaactcaagagaacttttcggtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 1727767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 23349590 - 23349682
Alignment:
Q  133 ttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  23349590 ttctttgacaactcaagagaactttttggtgtgtgaaattgtgtggaatgatggctctatttataggtgaggaggttgatgaaaaaaggaaaa 23349682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 8404421 - 8404321
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  8404421 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaatttttttt-tgtaaggactaaaaaacctattaaaattaagta 8404323  T
Q  364 ag 365  Q
    ||    
T  8404322 ag 8404321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 17742594 - 17742694
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||||||||||||||  || |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  17742594 aagagtttaaggataattaaacaaactttgttgtaacggggactaaaattagaagtaattttttttttgtaaggactaaaaaacctattaaaattaagta 17742693  T
Q  364 a 364  Q
    |    
T  17742694 a 17742694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 9687558 - 9687453
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||  ||||||         |||||||||| ||||||||||||||||||||||    
T  9687558 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattcaaagtaatttttttt-tgtagggactaaaaaacctattaaaattaagta 9687460  T
Q  364 agaatta 370  Q
    || ||||    
T  9687459 aggatta 9687453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 621653 - 621596
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  621653 aagagtttaaggataattaaacaaactttgttgtaatagagactaaaattagaagtaa 621596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 8337110 - 8337167
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  8337110 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattaaaagtaa 8337167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 10464005 - 10464062
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  10464005 aagagtttaaggataattaaacaaactttattgtaatagggactaaaattagaagtaa 10464062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 23377674 - 23377723
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23377674 aagggacaaaaattaccgaagggacaaaattccgaagggacttttccgaa 23377723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 27308087 - 27308144
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  27308087 aagagtttaaggataattaaacaaactttgttgtaataaggactaaaattagaagtaa 27308144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 34010190 - 34010247
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  34010190 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattaaaagtaa 34010247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 367
Target Start/End: Original strand, 31211457 - 31211560
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||         ||||| |||| ||||| |||||||||||||||     
T  31211457 aagagtttaaggataattaaacaaactttgttttaagagggactaaaattagaagtaattttttatttgtagtgactaaaaaaactattaaaattaagtt 31211556  T
Q  364 agaa 367  Q
    ||||    
T  31211557 agaa 31211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 37103300 - 37103404
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||| |||||||||||||| | | ||||||||||||||||          |||||||||| ||||||||||||||||||||||    
T  37103300 aagagtttaaggataattaaataaactttgttgtaacaaggactaaaattagaagta--gttttttttgtagggactaaaaaacctattaaaattaagta 37103397  T
Q  364 agaatta 370  Q
    || ||||    
T  37103398 aggatta 37103404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 8313476 - 8313533
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||    
T  8313476 aagagtttaaggataattaaacaaactttcttataatagggactaaaattagaagtaa 8313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 22023124 - 22023071
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  22023124 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaa 22023071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 24956227 - 24956276
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  24956227 aaggtacaaaaattaccgaagggacaaaattccgaagggacttttccgaa 24956276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 24964687 - 24964736
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  24964687 aaggtacaaaaattaccgaagggacaaaattccgaagggacttttccgaa 24964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 27335898 - 27335955
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  27335898 aagagtttaaggataattaaataaactttgttgtaacaggaactaaaattaaaagtaa 27335955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 28456776 - 28456876
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| |   |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  28456776 aagagtttaaggataattaaacaaactttgttgtaacattgactaaaattagaagtaatgtttttt-tgtagggactaaaaaatctattaaaattaagta 28456874  T
Q  364 ag 365  Q
    ||    
T  28456875 ag 28456876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 34785277 - 34785220
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  34785277 aagaatttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaa 34785220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 42877639 - 42877582
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||    
T  42877639 aagagtttaagaataattaaacaaactttgttgtaacagggactaaaattagaagtaa 42877582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 4426290 - 4426346
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  4426290 aagagtttaaggataattaaacaaactttgttgtaataaggactaaaattaaaagta 4426346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 4463024 - 4463127
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnct-gta-gggactgaaaaacctattaaaattaag 361  Q
    |||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||| |         | ||| |||||||||||||||||||||||||||    
T  4463024 aagagtttaaggataattaaacaaactttgttgtacgagggactaaaattagaagtgatttttttttttgtaagggactgaaaaacctattaaaattaag 4463123  T
Q  362 taag 365  Q
    ||||    
T  4463124 taag 4463127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 28844609 - 28844567
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  28844609 aagggacaaaaattaccgaagggacaaaattccgaagggactt 28844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 28853219 - 28853177
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  28853219 aagggacaaaaattaccgaagggacaaaattccgaagggactt 28853177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 1683192 - 1683091
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||| ||||||||||||| || || |||| |||||||||||||||||         |||||||||| ||||||||||||||| ||| ||    
T  1683192 aagagtttaaggatagttaaacaaactttattttagtagggactaaaattagaagtaattttttttttgtagggactaaaaaacctattaaaactaaata 1683093  T
Q  364 ag 365  Q
    ||    
T  1683092 ag 1683091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 2004212 - 2004269
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  2004212 aagagtttaaggataattaaacaaactttgttgtagcagggactaaaattagacgtaa 2004269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 40015601 - 40015560
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggact 54  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  40015601 aagggacaaaaattaccgaagggacaaaattccgaagggact 40015560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 1727551 - 1727587
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  1727551 taccgaagggacaaaattccgaagggacttttccgaa 1727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 41192937 - 41192897
Alignment:
Q  331 tgtagggactgaaaaacctattaaaattaagtaagaattat 371  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  41192937 tgtagggactaaaaaacctattaaaattaagtaagaattat 41192897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 43597439 - 43597475
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  43597439 taccgaagggacaaaattccgaagggacttttccgaa 43597475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 43630233 - 43630269
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  43630233 taccgaagggacaaaattccgaagggacttttccgaa 43630269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 20099036 - 20099071
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  20099036 accgaagggacaaaattccgaagggacttttccgaa 20099071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 34527286 - 34527341
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  34527286 aagaatttaaggataattaaacaaactttgttttagtagggactaaaattagaagt 34527341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 23349467 - 23349509
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  23349467 aagggacaaaaattaccgaagggacaaaatttcgaagggactt 23349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 38227452 - 38227535
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttata-ggtgaggaggttgatgaaaa 216  Q
    |||||||||||| |||| | ||||||||||||||  ||  ||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  38227452 gttctttgacaagtcaagataacttttggtgtgtataa--gtgaggaatgagagctatatttatagggtgaggaggttgatgaaaa 38227535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 8337046 - 8337087
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  8337046 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 8337087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 9924444 - 9924485
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  9924444 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 9924485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 10463940 - 10463981
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  10463940 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 10463981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 24636965 - 24636908
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| ||||| |||||||||||    
T  24636965 aagagtttaaggataattaaacaaactttgttttaggagggactaatattagaagtaa 24636908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 26865733 - 26865676
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    ||||| || ||||||||||||||||||||||| || |||| |||||||||| ||||||    
T  26865733 aagagcttaaggataattaaacaaactttgttttagtagggactaaaattataagtaa 26865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 37103235 - 37103276
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  37103235 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 37103276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 38693493 - 38693436
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| ||||| |||||||||||    
T  38693493 aagagtttaaggataattaaacaaactttgttttagcagggactaatattagaagtaa 38693436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 9924509 - 9924557
Alignment:
Q  273 aggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||||||||||| |||||||||| ||| |||||||||| ||||||    
T  9924509 aggataattaaacaaattttgttgtaacagggactaaaattataagtaa 9924557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 25041670 - 25041710
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  25041670 aagggacaaaaattaccgaagggacaaaatttcgaagggac 25041710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 30249980 - 30249941
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaaggg 51  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  30249980 caaagggacaaaatt-accgaagggacaaaattccgaaggg 30249941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 20639254 - 20639293
Alignment:
Q  16 ggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  20639254 ggacaaaaattaccgaagagacaaaattccgaagggactt 20639293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 6365382 - 6365348
Alignment:
Q  229 agtaaatgaacctttcatagttttctaaacttgtc 263  Q
    ||||||||||| |||||||||||||||||||||||    
T  6365382 agtaaatgaacatttcatagttttctaaacttgtc 6365348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 8313412 - 8313450
Alignment:
Q  223 aatttgagtaaatgaacctttcatagttttctaaacttg 261  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  8313412 aattttagtaaatgaacctttcatagtgttctaaacttg 8313450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 37446668 - 37446718
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaatta 314  Q
    |||||||  ||||||||||||||||||||| | ||||||| ||||||||||    
T  37446668 aagagttcaaggataattaaacaaactttgctttaatagggactaaaatta 37446718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 1683257 - 1683216
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||| ||||||||| |||||||||||||    
T  1683257 aaattttagtaaatgaacttttcatagtgttctaaacttgtc 1683216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 4461989 - 4461932
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||| ||| ||  ||| |||||||||| ||||||    
T  4461989 aagagtttaaggataattaaacaaacttcgttttagcagggactaaaattataagtaa 4461932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 18950896 - 18950840
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| | ||  |||||||| ||||||||||    
T  18950896 aagagtttaaggataattaaacaaactttgtt-ttatcagaactaaatttagaagtaa 18950840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 24637031 - 24636990
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||| ||||||    
T  24637031 aaattttagtaaatgaacctttcatagtgttctaaccttgtc 24636990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 26186054 - 26186091
Alignment:
Q  16 ggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  26186054 ggacaaaaattaccgaagggacaaaattctgaagggac 26186091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 27308030 - 27308063
Alignment:
Q  230 gtaaatgaacctttcatagttttctaaacttgtc 263  Q
    ||||||||| ||||||||||||||||||||||||    
T  27308030 gtaaatgaatctttcatagttttctaaacttgtc 27308063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 34785342 - 34785301
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  34785342 aaattttagtaaatgaacctttcatagtgttataaacttgtc 34785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 38693558 - 38693517
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  38693558 aaattttagtaattgaacctttcatagtattctaaacttgtc 38693517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 40158532 - 40158589
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||| | |||| | | |||||||| ||||||||    
T  40158532 aagagtttaaggataattaaacaaactttctcgtaacaaggactaaaataagaagtaa 40158589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 10058439 - 10058403
Alignment:
Q  27 accgaagggacaaaatt-ccgaagggacttttccgaa 62  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10058439 accgaagggacaaaattaccgaagggacttttccgaa 10058403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 21837142 - 21837182
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  21837142 aaattttagtaaatgaaccttttatagtgttctaaacttgt 21837182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 19737520 - 19737614
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19737520 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 19737614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 20548930 - 20548836
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20548930 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 20548836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 50188344 - 50188250
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50188344 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 50188250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 55792744 - 55792838
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55792744 gttctttgataactcaatagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtggggaggttgatgaaaaatggaaaatt 55792838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 3381951 - 3382045
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  3381951 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 3382045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 8658049 - 8657955
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8658049 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggattgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 8657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 3388697 - 3388791
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  3388697 gttctttgacaactcaagagaatttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 3388791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 39744937 - 39745031
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  39744937 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgagaagtttgatgaaaaaaggaaaatt 39745031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 8093790 - 8093883
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8093790 gttctttgacaactcaagagaactttttggtgtgtcaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 8093883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 8102595 - 8102688
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8102595 gttctttgacaactcaagagaactttttggtgtgtcaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 8102688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 38853912 - 38853819
Alignment:
Q  133 ttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||    
T  38853912 ttctttgacaactcaagagaacttttggtgtgtcaaattgtgtggaatgaatgctctatttataggtgaggagtttgatgaaaaaaggaaaatt 38853819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 8817024 - 8817097
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggag 205  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  8817024 gttctttgacaactcaagataacttttggtgtgtgaaattgtgtggaatgtgagctctatttataggtgaggag 8817097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 28448418 - 28448317
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||          ||||||||| ||||||||||||||||||||||    
T  28448418 aagagtttaaggataattaaacaaactttgttgtaagagggactaaaattagaagtaatttttttttggtagggactaaaaaacctattaaaattaagta 28448319  T
Q  364 ag 365  Q
    ||    
T  28448318 ag 28448317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 33177448 - 33177350
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  33177448 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattagaagtaattcttttt-tgtagggactaaaaaatctattaaaattaagta 33177350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 7617445 - 7617340
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  7617445 aagagtttaaggataattaaacaaactttgttgtaataaggactaaaattagaagtaattcttttt-tgtagggactaaaaaatctattaaaattaagta 7617347  T
Q  364 agaatta 370  Q
    || ||||    
T  7617346 aggatta 7617340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 51395639 - 51395540
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||         |||||||||| |||||| |||||||||||||||    
T  51395639 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaattttttt--tgtagggactaaaaaacttattaaaattaagta 51395542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 53324043 - 53324100
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53324043 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattagaagtaa 53324100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 50188466 - 50188415
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50188466 caaagggacaaaaattaccgaagggacaaaattccgaagggacttttccgaa 50188415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 38114264 - 38114159
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||         |||| | ||| ||||||||||||||||||||||    
T  38114264 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaattcttttt-tgtatgaactaaaaaacctattaaaattaagta 38114166  T
Q  364 agaatta 370  Q
    || ||||    
T  38114165 aggatta 38114159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 22068365 - 22068466
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||| ||| ||| ||||||||| |||||||         |||||||||| ||||| ||||||||||||||||    
T  22068365 aagagtttaaggataattaaacaaactttgttttaaaagggactaaaatttgaagtaattttttttttgtagggactaaaaaatctattaaaattaagta 22068464  T
Q  364 ag 365  Q
    ||    
T  22068465 ag 22068466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 55938335 - 55938392
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  55938335 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattataagtaa 55938392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 7490961 - 7491058
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||         |||| ||||| ||||||||||||||||||||||    
T  7490961 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattaaaagtaatttttt---tgtaaggactaaaaaacctattaaaattaagta 7491057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 18482899 - 18482985
Alignment:
Q  139 gacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||| | |||||||||||||| ||||||||| ||||||| |||||||||||||||    ||||||||| |||||||||||||    
T  18482899 gacaactcaagagaacttttggtgtgtcaaattgtgtcgaatgagagctctatttataggtttaaaggttgatg-aaaatggaaaatt 18482985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 3862515 - 3862411
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  3862515 aagagtttaaggataattaaacaaattttgttgtaacagggactaaaattagaagtaattcttttt-tgtagggact-aaaaaactattaaaattaagta 3862418  T
Q  364 agaatta 370  Q
    || ||||    
T  3862417 aggatta 3862411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 3871272 - 3871168
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  3871272 aagagtttaaggataattaaacaaattttgttgtaacagggactaaaattagaagtaattcttttt-tgtagggact-aaaaaactattaaaattaagta 3871175  T
Q  364 agaatta 370  Q
    || ||||    
T  3871174 aggatta 3871168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 47309702 - 47309807
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||         |||||||||| |||||  |||||||||||||||    
T  47309702 aagagtttaaggataattaaacaaactttgttgcaataaggactaaaattagaagtaattcttttt-tgtagggactaaaaaatatattaaaattaagta 47309800  T
Q  364 agaatta 370  Q
    || ||||    
T  47309801 aggatta 47309807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 11670374 - 11670431
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  11670374 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagtaa 11670431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 20177861 - 20177772
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    ||||||||||||| |||||||||| ||  |||||||||||||||||         |||||||||| ||||||||||||||||||||||||    
T  20177861 ataattaaacaaattttgttgtaacagtgactaaaattagaagtaattttttgtttgtagggactaaaaaacctattaaaattaagtaag 20177772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 13718021 - 13717964
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||| |||||| | | |||||||||||||||||    
T  13718021 aagagtttaaggataattaaacaaacttttttgtaacatggactaaaattagaagtaa 13717964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 47463634 - 47463691
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | ||||||||||||||||||||||||| |  ||||||||||||||||||    
T  47463634 aagagtttaaagataattaaacaaactttgttgtaacaaaaactaaaattagaagtaa 47463691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 8093668 - 8093704
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  8093668 taccgaagggacaaaattccgaagggacttttccgaa 8093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 8102473 - 8102509
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  8102473 taccgaagggacaaaattccgaagggacttttccgaa 8102509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 53571569 - 53571514
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||||||| ||||| ||||||||||||||||| || |||| |||||||||||||||    
T  53571569 aagagtttaaggatgattaaacaaactttgttttagtagggactaaaattagaagt 53571514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 28448492 - 28448442
Alignment:
Q  213 aaaaatggaaaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| | |||||| ||||||||||||||||||||| |||||||||||||    
T  28448492 aaaaattgtaaattttagtaaatgaacctttcatagtgttctaaacttgtc 28448442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 3873244 - 3873203
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  3873244 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 3873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 8816905 - 8816953
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  8816905 aagggacaaaatt-atcgaatggacaaaattccgaagggacttttccgaa 8816953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 19522915 - 19522956
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  19522915 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 19522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 30331305 - 30331248
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| || |||||||||||||||||||||||| ||| |||||  ||||||||||    
T  30331305 aagagtttaagaataattaaacaaactttgttgtaacagggactaattttagaagtaa 30331248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 31316809 - 31316865
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  31316809 aagagtttaaggataattaaacaaactttgttttagcagg-actaaaattagaagtaa 31316865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 47379268 - 47379227
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  47379268 aaattttagtaaatgaacctttcatagtattctaaacttgtc 47379227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 53323978 - 53324019
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  53323978 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 53324019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 53423655 - 53423614
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  53423655 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 53423614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 30331370 - 30331330
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  30331370 aaattttagtaaatgaacctttcatagtgttctaaacttgt 30331330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 3873006 - 3872967
Alignment:
Q  331 tgtagggactgaaaaacctattaaaattaagtaagaatta 370  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  3873006 tgtagggactaaaaaacctattaaaattaagtaaggatta 3872967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 4850360 - 4850419
Alignment:
Q  262 tcaagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||||| || |||||||||||||||||||| ||  | |||||||||||| ||||||    
T  4850360 tcaagagtttaagaataattaaacaaactttgttttagcaagaactaaaattataagtaa 4850419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 6589099 - 6589133
Alignment:
Q  331 tgtagggactgaaaaacctattaaaattaagtaag 365  Q
    |||||||||||||||| ||||||||||||||||||    
T  6589099 tgtagggactgaaaaagctattaaaattaagtaag 6589133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 44289883 - 44289921
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  44289883 attttagtaaatgaacctttcatagtgttctaaacttgt 44289921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 10321963 - 10322020
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | |||||||||||||||||| || ||  ||| |||||||||||||||||    
T  10321963 aagagtttaaagataattaaacaaacttttttttagcagggactaaaattagaagtaa 10322020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 25422334 - 25422391
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| ||||||| || ||||||    
T  25422334 aagagtttaaggataattaaacaaactttgttttagcagggactaaaaataaaagtaa 25422391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 31316744 - 31316785
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  31316744 aaattttagtaattgaacctttcatagtgttctaaacttgtc 31316785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 33177513 - 33177472
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||| ||||||||| |||||||||||||    
T  33177513 aaattttagtaaatgaacttttcatagtattctaaacttgtc 33177472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 43938206 - 43938247
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||| ||||||    
T  43938206 aaattttagtaaatgaacctttcatagtgttctaagcttgtc 43938247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 47309637 - 47309678
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  47309637 aaattttagtaaatgaacctttcacagtgttctaaacttgtc 47309678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 4313104 - 4313198
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4313104 gttctttgacaactcaatagaacttttggtgtgtaaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 4313198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 8606712 - 8606618
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8606712 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 8606618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 13105152 - 13105246
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13105152 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 13105246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 23287640 - 23287734
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23287640 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 23287734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 13111309 - 13111400
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaa 223  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13111309 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgatggctctatttataggtgaggaggttgatgaaaaatggaaa 13111400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 68705 - 68611
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  68705 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 68611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 74798 - 74704
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  74798 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 74704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 8613173 - 8613079
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8613173 gttctttggcaactcaagagaacttttggtgtgtgaaattgtgtggaatgaaggctctatttataggtgaggaggttgatgaaaaatggaaaatt 8613079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 9524928 - 9525022
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9524928 gttctttgacaactcaagagaacttttggtgtgtgaaattgtatggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 9525022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 9554604 - 9554698
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9554604 gttctttgacaactcaagagaacttttggtgtgtgaaattgtatggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 9554698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 14880824 - 14880918
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14880824 gttctttgacaactcaagagaacttttgatgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaatt 14880918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 14892639 - 14892733
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14892639 gttctttgacaactcaagagaacttttgatgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaatt 14892733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 17934624 - 17934530
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17934624 gttctttgacaactcaagagaacttttggtgtgtaaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 17934530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 48060242 - 48060336
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  48060242 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttatagttgaagaggttgatgaaaaatggaaaatt 48060336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 14887541 - 14887635
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  14887541 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggttctatttataggtgaggagtttgatgaaaaaaggaaaatt 14887635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 21638071 - 21638165
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  21638071 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggagtttgatgaaaaaaggaaaatt 21638165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 37468578 - 37468484
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||| |||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  37468578 gttctttgacaattcaagagaacttttggtgtgtgaaattgtgtggaatgatgactctatttataggtgaggaggttgatgaaaaatggaaaatt 37468484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 8154154 - 8154247
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8154154 gttctttgacaactcaagagaactttttggtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 8154247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 261907 - 261815
Alignment:
Q  134 tctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||||    
T  261907 tctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgagggggttgatgaagaaaggaaaatt 261815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 26386224 - 26386314
Alignment:
Q  136 tttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||| | || ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  26386224 tttgacaactcaagagaatttttggtgtgtgaaattgtgtggaatgagagttctatttataggtaaggaggttgatgaaaaatggaaaatt 26386314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 41015906 - 41015813
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41015906 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 41015813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 11181319 - 11181227
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||| | |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  11181319 gttctttgacaactcgaga--acttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaagaaaggaaaatt 11181227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 41007127 - 41007033
Alignment:
Q  132 gttctttgacaactcaatacaactttt--ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41007127 gttctttgacaactcaagagaactttttgggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 41007033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 16030828 - 16030922
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||||   |||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16030828 gttctttgacaactcaagtgaacttttggtgtgtaaaattttgtgaaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 16030922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 16815364 - 16815454
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||| ||||||||    
T  16815364 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggc----tatataggtgaggaggttgatgaaaaaaggaaaatt 16815454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 35491564 - 35491496
Alignment:
Q  155 ttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaa 223  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35491564 ttttggtgtctgaaattgtgtggaatgatggctctatttataggtgaggaggttgatgaaaaatggaaa 35491496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 45419812 - 45419712
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| | ||||||||||||||||||||||||| ||| |||||||||||||||||         |||||||||| ||||||||||||||||||||||    
T  45419812 aagagtttaaagataattaaacaaactttgttgtaacagggactaaaattagaagtaatttttttt-tgtagggactaaaaaacctattaaaattaagta 45419714  T
Q  364 ag 365  Q
    ||    
T  45419713 ag 45419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 40762627 - 40762528
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||        |  |||||||| ||||||||||||||||||||||    
T  40762627 aagagtttaaggataattaaacaaactttgttgtaacagggattaaaattagaagtaattttttttc--tagggactaaaaaacctattaaaattaagta 40762530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 14887194 - 14887240
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttcc 59  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  14887194 aagggacaaaaattaccgaagggacaaaattccgaagggacttttcc 14887240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 117474 - 117417
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  117474 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagtaa 117417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 11294062 - 11294115
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  11294062 aagagtttaaggataattaaacaaactttgttgtactagggactaaaattagaa 11294115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 29348552 - 29348640
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||         || ||||||| ||||||||||||||||||||||||    
T  29348552 ataattaaacaaactttgttgtaacagggactaaaattagaagtaattttcttt-tgcagggactaaaaaacctattaaaattaagtaag 29348640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 32943254 - 32943311
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  32943254 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagtaa 32943311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 44808866 - 44808809
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  44808866 aagagtttaaggataattgaacaaactttgttgtaacatgaactaaaattagaagtaa 44808809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 23917588 - 23917640
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattaga 316  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  23917588 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattaga 23917640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 68826 - 68784
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  68826 aagggacaaaaattaccgaagggacaaaattccgaagggactt 68784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 74919 - 74877
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  74919 aagggacaaaaattaccgaagggacaaaattccgaagggactt 74877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 23287519 - 23287561
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  23287519 aagggacaaaaattaccgaagggacaaaattccgaagggactt 23287561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 38174170 - 38174275
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| | |||||||||| |||||||||| ||| ||| |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  38174170 aagagtttaaagataattaaataaactttgttataacagggactaaaattagaagtaatttttttt-tgtatggactaaaaaacctattaaaattaagta 38174268  T
Q  364 agaatta 370  Q
    || ||||    
T  38174269 aggatta 38174275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 44363049 - 44363123
Alignment:
Q  142 aactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaa 216  Q
    ||||||||| |||||||||||||||     | |||||||||| ||| ||||||||||||||||||||||||||||    
T  44363049 aactcaatagaacttttggtgtgtgttgaagagtggaatgagagctatatttataggtgaggaggttgatgaaaa 44363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9524793 - 9524842
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  9524793 aagggacaaaaattaccgaagggacaaaatttcgaagggacctttccgaa 9524842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9554468 - 9554517
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  9554468 aagggacaaaaattaccgaagggacaaaatttcgaagggacctttccgaa 9554517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 12558402 - 12558353
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatg 181  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  12558402 gttctttgacaactcaagagaacttttggtgtctgaaattgtgtggaatg 12558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 48060122 - 48060166
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactttt 57  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||    
T  48060122 aagggacaaaaattaccgaagcgacaaaattccgaagggactttt 48060166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 370
Target Start/End: Complemental strand, 53517808 - 53517706
Alignment:
Q  267 agttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaaga 366  Q
    ||||| |||||||||||||||||||||| |||| | | ||||||||||||||| |         |||||||||| ||||||||||||||||||| ||||     
T  53517808 agtttaaggataattaaacaaactttgtcgtaacaaggactaaaattagaagt-attttttttttgtagggactaaaaaacctattaaaattaaataagg 53517710  T
Q  367 atta 370  Q
    ||||    
T  53517709 atta 53517706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 25250217 - 25250258
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  25250217 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 25250258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 50615111 - 50615054
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||| |||||||||||||||||| || |||| |||||||||| ||||||    
T  50615111 aagagtttaaggaaaattaaacaaactttgttttagtagggactaaaattataagtaa 50615054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 11045672 - 11045727
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||| ||||||||||| |||||||  |||||||||| ||||||||||||||||    
T  11045672 aagagtttaaggataattaa-caaacttgattgtaatagggactaaaattagaagta 11045727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 17934743 - 17934708
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17934743 accgaagggacaaaatttcgaagggacttttccgaa 17934708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 14525122 - 14525156
Alignment:
Q  331 tgtagggactgaaaaacctattaaaattaagtaag 365  Q
    |||||||||| ||||||||||||||||||||||||    
T  14525122 tgtagggactaaaaaacctattaaaattaagtaag 14525156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14880703 - 14880745
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||    
T  14880703 aagggacgaaaattaccgaagggataaaattccgaagggactt 14880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14892518 - 14892560
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||    
T  14892518 aagggacgaaaattacccaagggacaaaattccgaagggactt 14892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 39562639 - 39562601
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  39562639 attttagtaaatgaacctttcatagtgttctaaacttgt 39562601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 44362918 - 44362960
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  44362918 aagggacaaaaattaccgaagggacaaaatttcgaaaggactt 44362960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 260
Target Start/End: Original strand, 45406866 - 45406904
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaactt 260  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  45406866 aaattttagtaaatgaacctttcatagtgttctaaactt 45406904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 46295258 - 46295296
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  46295258 attttagtaaatgaacctttcatagtgttctaaacttgt 46295296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 11181453 - 11181405
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| |||||||||||||  | |||||||||||||||||||||    
T  11181453 aagggacaaaaattaccgaagggactta-ttccgaagggacttttccgaa 11181405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 21749769 - 21749810
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  21749769 aaattttagtaaatgaacctttcacagtattctaaacttgtc 21749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 371
Target Start/End: Original strand, 28260538 - 28260575
Alignment:
Q  334 agggactgaaaaacctattaaaattaagtaagaattat 371  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  28260538 agggactaaaaaaactattaaaattaagtaagaattat 28260575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 37179145 - 37179186
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  37179145 aaattttagtaattgaacctttcatagtgttctaaacttgtc 37179186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 44557606 - 44557549
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    ||||| || ||||||||||||||||||||||| || |||| || ||||||| ||||||    
T  44557606 aagagattaaggataattaaacaaactttgttttagtagggacgaaaattataagtaa 44557549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 45419877 - 45419836
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||| | |||||||||||||    
T  45419877 aaattttagtaaatgaacctttcataatgttctaaacttgtc 45419836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 11293997 - 11294037
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||| ||||||||||| ||||||||| ||||||||||||    
T  11293997 aaattttagtaaatgaacttttcatagtgttctaaacttgt 11294037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 26386113 - 26386153
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| |||||||| ||| ||||||||||||||||    
T  26386113 aagggacaaaaattaccgaaaggataaaattccgaagggac 26386153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 38174105 - 38174145
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  38174105 aaattttagtatatgaacctttcatagtgttctaaacttgt 38174145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 24142 - 24046
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatttg 228  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24142 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatgaaaaatttg 24046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 32007289 - 32007195
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32007289 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaatt 32007195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 39845122 - 39845214
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39845122 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 39845214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 22162499 - 22162592
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22162499 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctattt-taggtgaggaggttgatgaaaaatggaaaatt 22162592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 39837080 - 39837172
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39837080 gttctttgacaactcaagagaacttttggtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 39837172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 32000320 - 32000229
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaa 223  Q
    ||||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32000320 gttctttgacaactcaagagaacttttggtgtgtaaaattttgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaa 32000229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 22156496 - 22156589
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22156496 gttctttgacaactcaagagaacttttggtatgtgaaattgtgtggaatgagggctctattt-taggtgaggaggttgatgaaaaatggaaaatt 22156589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 25858778 - 25858872
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  25858778 gttctttaacaactcaagagaacttttggtgtgtgaaattgtgtgggatgatggctctatttataggtgaggaggttgatgaaaaatggaaaatt 25858872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 32025161 - 32025255
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  32025161 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgatgagtttgatgaaaaaaggaaaatt 32025255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 30938851 - 30938758
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  30938851 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 30938758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 25852562 - 25852625
Alignment:
Q  163 tgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25852562 tgtgaaattgtgtggaatgagggctctatctataagtgaggaggttgatgaaaaatggaaaatt 25852625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 25101987 - 25101882
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||| ||||| ||||||||||||||||    
T  25101987 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattagaagtaattcttttt-tgtagggactaaaaaatctattaaaattaagta 25101889  T
Q  364 agaatta 370  Q
    || ||||    
T  25101888 aggatta 25101882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 13386176 - 13386096
Alignment:
Q  136 tttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaa 216  Q
    ||||||||||||| | ||||||||||||||||||||||| |||||||  ||| |||||||||||||||| |||||||||||    
T  13386176 tttgacaactcaagagaacttttggtgtgtgaaattgtgaggaatgaaagctatatttataggtgaggaagttgatgaaaa 13386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 5250415 - 5250310
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||         | |||||||| ||||||||||||||||||||||    
T  5250415 aagagtttaaggataattaaacaaactttgttgtaagagggactaaaattagaagtaatttttttt-tatagggactaaaaaacctattaaaattaagta 5250317  T
Q  364 agaatta 370  Q
    || ||||    
T  5250316 aggatta 5250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 36470850 - 36470745
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||         |||||||||| ||||||||||||||||||||||    
T  36470850 aagagtttaaggataattaaacaaactttgttgtaacagggcctaaaattagaagtaatttttttt-tgtagggactaaaaaacctattaaaattaagta 36470752  T
Q  364 agaatta 370  Q
    || ||||    
T  36470751 aggatta 36470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 8784845 - 8784944
Alignment:
Q  265 agagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaa 364  Q
    |||||||  |||||||||||||||||||||||||| | |||||||||||||||||||         |||||||||| |||||||||||||||||||||||    
T  8784845 agagtttacggataattaaacaaactttgttgtaacaagaactaaaattagaagtaacttttttt-tgtagggactaaaaaacctattaaaattaagtaa 8784943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 30658480 - 30658424
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  30658480 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagta 30658424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 12469467 - 12469522
Alignment:
Q  266 gagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  12469467 gagtttaaggataattaaacaaactttgttgtaatagggactaaaattaaaagtaa 12469522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 370
Target Start/End: Complemental strand, 27875460 - 27875366
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaagaatta 370  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||         ||| |||||| ||||| |||||||||||||||||| ||||    
T  27875460 ataattaaacaaactttgttgtaagagggactaaaattagaagtaattttttttttgtggggactaaaaaatctattaaaattaagtaaggatta 27875366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 41590361 - 41590265
Alignment:
Q  267 agttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    ||||| |||||||||||||||||||||| |||| | | |||||||||||||||||         |||||||||| ||||||||||||||||||||||||    
T  41590361 agtttaaggataattaaacaaactttgtcgtaacaaggactaaaattagaagtaattttttt--tgtagggactaaaaaacctattaaaattaagtaag 41590265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 5695938 - 5695881
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  5695938 aagagtttaaggataattaaacaaactttgttgtaacagagactaaaattagaagtaa 5695881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 6590532 - 6590632
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| || |||||||||||||||||||||||| | | |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  6590532 aagagtttaagaataattaaacaaactttgttgtaacaaggactaaaattagaagtaattttcttt-tgtaaggactaaaaaacctattaaaattaagta 6590630  T
Q  364 ag 365  Q
    ||    
T  6590631 ag 6590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 30968930 - 30969029
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||| ||| ||| |||||||||| ||||||         |||||||||| ||||| ||||||||||||||||    
T  30968930 aagagtttaaggataattaaacaaactttgttttaagagggactaaaattataagtaaatttttt--tgtagggactaaaaaaactattaaaattaagta 30969027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 37967803 - 37967860
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  37967803 aagagtttaaggatgattaaacaaactttgttgtaacagggactaaaattagaagtaa 37967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 44265714 - 44265771
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  44265714 aagagtttaaggataattaaacaaactttgttgtaacagggagtaaaattagaagtaa 44265771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 43622816 - 43622715
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| | |||||||||||||||||||| |||| | |||||||||||||||||||         |||| ||||| ||||||||| ||||||||||||    
T  43622816 aagagtttaaagataattaaacaaactttgtcgtaacaagaactaaaattagaagtaattttttt--tgtaaggactaaaaaacctactaaaattaagta 43622719  T
Q  364 agaa 367  Q
    ||||    
T  43622718 agaa 43622715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 6018308 - 6018403
Alignment:
Q  267 agttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||| |         | |||||||| ||||||||||||||||||||||||    
T  6018308 agtttaagaataattaaacaaactttgttgtaatagg-actaaaattagaagtgatattttt--tttagggactaaaaaacctattaaaattaagtaag 6018403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 39836959 - 39837001
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  39836959 aagggacaaaaattaccgaagggacaaaattccgaagggactt 39837001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 39845001 - 39845043
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  39845001 aagggacaaaaattaccgaagggacaaaattccgaagggactt 39845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 18839943 - 18839886
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||| | | |||||||||||||||||    
T  18839943 aagagtttaaggataattaaacaaactttgttttaacatggactaaaattagaagtaa 18839886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 28015641 - 28015596
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  28015641 ataattaaacaaactttgttgtaagagggactaaaattagaagtaa 28015596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 36063461 - 36063409
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattaga 316  Q
    |||||||| ||||||||||||||||||||||| ||  ||||||||||||||||    
T  36063461 aagagtttaaggataattaaacaaactttgttttagcaggaactaaaattaga 36063409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 17062292 - 17062246
Alignment:
Q  275 gataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||    
T  17062292 gatagttaaacaaactttgttgtaacgggaactaaaattagaagtaa 17062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 17586066 - 17586112
Alignment:
Q  275 gataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||    
T  17586066 gatagttaaacaaactttgttgtaacgggaactaaaattagaagtaa 17586112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 42499406 - 42499300
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| || ||||||||||||||||| |||||| | ||||||||| | |||||||         |||| || || ||||||||||||||||||||||    
T  42499406 aagagtttaagaataattaaacaaactttattgtaacaagaactaaaacttgaagtaattttttttttgtaaggtctaaaaaacctattaaaattaagta 42499307  T
Q  364 agaatta 370  Q
    || ||||    
T  42499306 aggatta 42499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 6590467 - 6590508
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  6590467 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 6590508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 17842729 - 17842782
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| ||||||||||||||||||||||| || |||| ||||||| |||||    
T  17842729 aagagtttaaggataattaaacaaactttgttttagtagggactaaaaatagaa 17842782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 18304691 - 18304638
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| ||||||||||| ||||||||||||||| ||| ||||| |||||||    
T  18304691 aagagtttaaggataattaatcaaactttgttgtaagagggactaatattagaa 18304638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 35863307 - 35863364
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| ||||| |||||||||||    
T  35863307 aagagtttaaggataattaaacaaactttgttttagcagggactaatattagaagtaa 35863364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 38706456 - 38706411
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||    
T  38706456 ataattaaacaaactttgttgtaacagggtctaaaattagaagtaa 38706411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 42499470 - 42499429
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  42499470 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 42499429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 43936541 - 43936485
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||| ||||||  || |||||||||||||||||    
T  43936541 aagagtttaaggataattaaacaaacttttttgtaa-cgggactaaaattagaagtaa 43936485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 23483610 - 23483645
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaa 299  Q
    |||||||| |||||||||||||||||||||||||||    
T  23483610 aagagtttaaggataattaaacaaactttgttgtaa 23483645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 39337246 - 39337301
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||||||| ||||||||||||||||||||||  || || | |||||||||||||||    
T  39337246 aagagtttaaggataattaaacaaactttgtcttagtatggactaaaattagaagt 39337301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 5765804 - 5765766
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  5765804 attttagtaaatgaacctttcatagtgttctaaacttgt 5765766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 28755263 - 28755225
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  28755263 attttagtaaatgaacctttcatagtgttctaaacttgt 28755225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 35369456 - 35369510
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaag 318  Q
    |||| ||| ||||||||||||||||||||||| ||  ||| ||||||||||||||    
T  35369456 aagactttaaggataattaaacaaactttgttttagcagggactaaaattagaag 35369510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 260
Target Start/End: Complemental strand, 36470915 - 36470877
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaactt 260  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  36470915 aaattttagtaaatgaacctttcatagtgttctaaactt 36470877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 5696003 - 5695962
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  5696003 aaattttagtaaatgaacctttcatagtgttttaaacttgtc 5695962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 6018240 - 6018281
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||| | |||||||||||||    
T  6018240 aaattttagtaaatgaacctttcataatgttctaaacttgtc 6018281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 21135589 - 21135642
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| ||||||||||||||||||||||| |   ||| |||||||||||||    
T  21135589 aagagtttaaggataattaaacaaactttgttttggcagggactaaaattagaa 21135642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 21640681 - 21640609
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggag 205  Q
    ||||||||||||||||| | ||||||||| ||| | ||  ||| |||| ||| |||||||||||||||||||||    
T  21640681 gttctttgacaactcaagagaacttttggggtgagtaaaagtgaggaa-gagtgctctatttataggtgaggag 21640609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 23483545 - 23483586
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| | ||||||||||||||||||| |||||||||||||    
T  23483545 aaattttaataaatgaacctttcatagtgttctaaacttgtc 23483586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 24451685 - 24451726
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  24451685 aaattttagtaattgaacctttcatagtgttctaaacttgtc 24451726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 27875537 - 27875496
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||| ||||| |||||||||||||    
T  27875537 aaattttagtaaatgaacctttaatagtgttctaaacttgtc 27875496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 28015718 - 28015677
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||| ||||| |||||||||||||    
T  28015718 aaattttagtaaatgaacctttaatagtgttctaaacttgtc 28015677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 33322799 - 33322856
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | ||||||||||||||||||  | ||| |||||||||||||| ||||||    
T  33322799 aagagtttaaagataattaaacaaactttactataacaggaactaaaattaaaagtaa 33322856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 35863242 - 35863283
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  35863242 aaattttagtaattgaacctttcatagtgttctaaacttgtc 35863283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 37967745 - 37967778
Alignment:
Q  230 gtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||||||||||||||||| |||||||||||||    
T  37967745 gtaaatgaacctttcatagtgttctaaacttgtc 37967778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 38706533 - 38706492
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||| | |||||||||||||    
T  38706533 aaattttagtaaatgaacctttcatattgttctaaacttgtc 38706492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 41281327 - 41281270
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  | | |||||| ||||||||||    
T  41281327 aagagtttaaggataattaaacaaactttgttttagcaaggactaaatttagaagtaa 41281270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 44265649 - 44265690
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| || |||||||||||||||||| |||||||||||||    
T  44265649 aaattttagcaaatgaacctttcatagtgttctaaacttgtc 44265690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 547337 - 547373
Alignment:
Q  334 agggactgaaaaacctattaaaattaagtaagaatta 370  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  547337 agggactaaaaaacctattaaaattaagtaaggatta 547373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 24451750 - 24451806
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||| || ||||||||||||||||| || ||  ||| ||||||||||||||||    
T  24451750 aagagtttaagaataattaaacaaactttattttagcagggactaaaattagaagta 24451806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 32000427 - 32000399
Alignment:
Q  27 accgaagggacaaaattccgaagggactt 55  Q
    |||||||||||||||||||||||||||||    
T  32000427 accgaagggacaaaattccgaagggactt 32000399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 33322742 - 33322774
Alignment:
Q  230 gtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||||||||||||||||| ||||||||||||    
T  33322742 gtaaatgaacctttcatagtgttctaaacttgt 33322774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 6851522 - 6851616
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6851522 gttctttgacaactcaagagaacttttgatgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 6851616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 46461629 - 46461721
Alignment:
Q  134 tctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46461629 tctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggccctatttataggtgaggaggttgatgaaaaatggaaaatt 46461721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 28415685 - 28415591
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28415685 gttctttgacaactcaagagaacttttgatatgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 28415591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 20542412 - 20542505
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20542412 gttctttgacaactcag-agaacttttggtatgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgataaaaaatggaaaatt 20542505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 18303899 - 18303992
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18303899 gttctttgacaactcaagagaactttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 18303992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 1858081 - 1858175
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||    
T  1858081 gttctttgacaactcaagagaactgttggtgtgtgaaattgtgtggaatgagagctctatttataggtgagaaggttgatgaagaaaggaaaatt 1858175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 43005217 - 43005291
Alignment:
Q  152 aacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43005217 aacttttggtgtgtgaaattatgtggaatgagggctctatttataggtgaggaggttgatgaaaaatgaaaaatt 43005291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 12979024 - 12978931
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12979024 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 12978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 13832047 - 13831954
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  13832047 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 13831954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 13840077 - 13839984
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  13840077 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 13839984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 44412824 - 44412918
Alignment:
Q  133 ttctttgacaactcaatacaacttttggtgtgtg--aaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  44412824 ttctttgacaactcaagagaacttttggtgtgtgtaaaattgtgtggaatgagggctctatttataggcgaggaggttgatg-aaaatggaaaatt 44412918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 46299433 - 46299526
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||| ||| | ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  46299433 gttctttgacaacccaagagaacttttggtgtgtgaaattgtgagggatgagagctctatttataggtgaggaggttgatg-aaaatggaaaatt 46299526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 4831856 - 4831949
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||| |||||||||| || |||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  4831856 gttctttgacaactcaagagaacttttggtgtctgaaattgtgagggatgatggctctatttatagatgaggaggttgat-aaaaatggaaaatt 4831949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 27727253 - 27727152
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||| ||||||||||||||||||||||    
T  27727253 aagagtttaaagataattaaacaaactttgttgtaatagggactaaaattagaagtaattttttttttgtagggacttaaaaacctattaaaattaagta 27727154  T
Q  364 ag 365  Q
    ||    
T  27727153 ag 27727152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 34138683 - 34138738
Alignment:
Q  171 tgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  34138683 tgtgtggaatgagggctctatttataggtgaggaggttgatgaagaaaggaaaatt 34138738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 6331164 - 6331269
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||         ||| |||||| ||||| ||||||||||||||||    
T  6331164 aagagtttaaggataattaaacaaactttgttgtaataaggactaaaattagaagtaattcttttt-tgttgggactaaaaaatctattaaaattaagta 6331262  T
Q  364 agaatta 370  Q
    || ||||    
T  6331263 aggatta 6331269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 7238603 - 7238498
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||||         |||||||||| ||||||||||||||||||| ||    
T  7238603 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattcgaagtaatttttttt-tgtagggactaaaaaacctattaaaattaaata 7238505  T
Q  364 agaatta 370  Q
    || ||||    
T  7238504 aggatta 7238498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 38159220 - 38159277
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38159220 aagagtgtaaggataattaaacaaactttgttgtaatagggactaaaattagaagtaa 38159277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 43597511 - 43597454
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  43597511 aagagtttaaggataattaaacaaactttgttgtaataaggactaaaattagaagtaa 43597454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 29155989 - 29155933
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29155989 aagagtttaaggataattaaacaaactttgttctaatagggactaaaattagaagta 29155933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 34132374 - 34132426
Alignment:
Q  174 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  34132374 gtggaatgagggctctatttataggtgaggaggttgatgaagaaaggaaaatt 34132426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 22378485 - 22378380
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||         |||| ||||| ||||| ||||||||||||||||    
T  22378485 aagagtttaaggataattaaacaaactttgttgtaataaggattaaaattagaagtaattcttttt-tgtaaggactaaaaaatctattaaaattaagta 22378387  T
Q  364 agaatta 370  Q
    || ||||    
T  22378386 aggatta 22378380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 14990575 - 14990518
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||    
T  14990575 aagagtttaaggataattaaacaaactttgttgtaacaaggactaaaattagaagtaa 14990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 15420186 - 15420129
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||    
T  15420186 aagagtttaaggataattaaacaaactttgttgtaacaaggactaaaattagaagtaa 15420129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 43083882 - 43083825
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  43083882 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagtaa 43083825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 3495911 - 3495966
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  3495911 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagt 3495966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 4926643 - 4926748
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| | ||||||||||||||||||||||||| ||  |||||||||||||||||         | || ||||| ||||||||||||||||||||||    
T  4926643 aagagtttaaagataattaaacaaactttgttgtaacagagactaaaattagaagtaatttttttt-tatatggactaaaaaacctattaaaattaagta 4926741  T
Q  364 agaatta 370  Q
    || ||||    
T  4926742 aggatta 4926748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 34138533 - 34138575
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  34138533 aagggacaaaaattaccgaagggacaaaattccgaagggactt 34138575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 1962166 - 1962223
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||| |||||||||||||||   |||||||||||||||||    
T  1962166 aagagtttaaggataattaaacgaactttgttgtaataacgactaaaattagaagtaa 1962223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 6588955 - 6589012
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||||| |||| | | |||||||||||||||||    
T  6588955 aagagtttaaggataattaaacaaactttgtcgtaacaaggactaaaattagaagtaa 6589012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 18059272 - 18059328
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  18059272 aagagtttaaggataattaaacaaa-tttgttgtaacagggactaaaattagaagtaa 18059328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 18303792 - 18303828
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  18303792 taccgaagggacaaaattccgaagggacttttccgaa 18303828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 18156628 - 18156675
Alignment:
Q  20 aaaatttaccgaagggacaaaattccgaagggacttttccgaatagac 67  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  18156628 aaaaattaccgaagggacaaaattcagaagggacttttccgaagagac 18156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 34132236 - 34132271
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  34132236 accgaagggacaaaattccgaagggacttttccgaa 34132271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 18059209 - 18059250
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  18059209 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 18059250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 22347346 - 22347309
Alignment:
Q  189 tatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22347346 tatttattggtgaggaggttgatgaaaaatggaaaatt 22347309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 33625053 - 33625110
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  | | |||||||||||||||||    
T  33625053 aagagtttaaggataattaaacaaactttgttttagcaaggactaaaattagaagtaa 33625110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 38159155 - 38159196
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  38159155 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 38159196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 38199317 - 38199373
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||| ||||||| || |||| |||||||||||||||||    
T  38199317 aagagtttaaggataattaaacaa-ctttgttttagtagggactaaaattagaagtaa 38199373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 43597576 - 43597535
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  43597576 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 43597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 44167821 - 44167764
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||  |||||||||||||||||    
T  44167821 aagagtttaaggataattaaacaaactttgttttagcagtgactaaaattagaagtaa 44167764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 46044318 - 46044261
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||| |||||||||| ||  ||| |||||||||||||||||    
T  46044318 aagagtttaaggataattaaaaaaactttgttttagcagggactaaaattagaagtaa 46044261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 4831762 - 4831808
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttcc 59  Q
    ||||||||||| ||||||||||||||| ||| |||||| ||||||||    
T  4831762 aagggacaaaaattaccgaagggacaacatttcgaaggaacttttcc 4831808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 260
Target Start/End: Original strand, 4926578 - 4926616
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaactt 260  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  4926578 aaattttagtaaatgaacctttcatagtgttctaaactt 4926616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 34138654 - 34138688
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtg 166  Q
    ||||||||||||||||||| |||||||||||||||    
T  34138654 gttctttgacaactcaatagaacttttggtgtgtg 34138688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 4899891 - 4899842
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaatt 313  Q
    |||||||| |||||||||||| |||||||||| ||| ||| |||||||||    
T  4899891 aagagtttaaggataattaaataaactttgttttaacaggtactaaaatt 4899842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 6331099 - 6331140
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  6331099 aaattttagtaaatgaacctttcatagtgttttaaacttgtc 6331140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 7238668 - 7238627
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||| | |||||||||||||    
T  7238668 aaattttagtaaatgaacctttcataatgttctaaacttgtc 7238627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 11396985 - 11396928
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| |||||||||||||||||||| || ||  ||| |||||||||| ||||||    
T  11396985 aagagtttaaggataattaaacaaactttattttagcagggactaaaattataagtaa 11396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 15130913 - 15130954
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  15130913 aaattttagtaattgaacctttcatagtgttctaaacttgtc 15130954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 25831873 - 25831800
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggag 205  Q
    ||||||||||||||||| | ||||||||||||  |||   ||| | |||||  |||||||||||||||||||||    
T  25831873 gttctttgacaactcaagagaacttttggtgtaagaagaagtgagaaatgaaagctctatttataggtgaggag 25831800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 35482151 - 35482110
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||| ||||||||| |||||||||||||    
T  35482151 aaattttagtaaatgaacatttcatagtgttctaaacttgtc 35482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 44081161 - 44081202
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| ||||||| |||||    
T  44081161 aaattttagtaaatgaacctttcatagtattctaaatttgtc 44081202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 45958741 - 45958696
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||||||||||||||| ||  || ||||||||||||||||||    
T  45958741 ataattaaacaaactttgttttagcagaaactaaaattagaagtaa 45958696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 46044383 - 46044342
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  46044383 aaattttagtaattgaacctttcatagtgttctaaacttgtc 46044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 46331002 - 46331043
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  46331002 aaattttagtaattgaacctttcatagtgttctaaacttgtc 46331043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 7528458 - 7528486
Alignment:
Q  189 tatttataggtgaggaggttgatgaaaaa 217  Q
    |||||||||||||||||||||||||||||    
T  7528458 tatttataggtgaggaggttgatgaaaaa 7528486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 365
Target Start/End: Complemental strand, 10463255 - 10463223
Alignment:
Q  333 tagggactgaaaaacctattaaaattaagtaag 365  Q
    |||||||||||||| ||||||||||||||||||    
T  10463255 tagggactgaaaaagctattaaaattaagtaag 10463223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 20542292 - 20542332
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    
T  20542292 aagggacaaaaattaccgaaggggcaaaactccgaagggac 20542332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 33624990 - 33625030
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||||| ||||| ||||||||||||||| ||||||||||||    
T  33624990 aaattttagtaattgaacctttcatagtgttctaaacttgt 33625030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 35482075 - 35482039
Alignment:
Q  275 gataattaaacaaactttgttgtaataggaactaaaa 311  Q
    ||||||||||||||||||||||||||||  |||||||    
T  35482075 gataattaaacaaactttgttgtaatagagactaaaa 35482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 2416213 - 2416307
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2416213 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatt 2416307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 44832062 - 44832156
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44832062 gttctttgacaactcaagagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 44832156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 19368017 - 19367922
Alignment:
Q  133 ttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatttg 228  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  19368017 ttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggatctatttataggtgaggaggttgatgaaaaaaggaaaatttg 19367922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 47108928 - 47108834
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  47108928 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaatt 47108834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 20429913 - 20429818
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  20429913 gttctttgacaactcaagagaactttttggtgtgtgaaattgtgtggaatgagggttctatttataggtgaggaggttaatgaaaaatggaaaatt 20429818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 15473376 - 15473470
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||    
T  15473376 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgaggtctctatttataagtaaggaggttgatgaaaaaaggaaaatt 15473470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 31540523 - 31540430
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31540523 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 31540430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 31549092 - 31548999
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31549092 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 31548999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 3432410 - 3432501
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    |||| |||||||||||| | ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3432410 gttcattgacaactcaagagaactttttg-gtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 3432501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 51968483 - 51968390
Alignment:
Q  133 ttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||| | ||||||| |||||| ||||||||| || ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  51968483 ttctttgacaactcaagagaactttttggtgtgagaaattgtgagggatgagggatctatttataggtgaggaggttgatg-aaaatggaaaatt 51968390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 30719748 - 30719805
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30719748 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaattagaagtaa 30719805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 19368138 - 19368089
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19368138 aagggacaaaaattaccgaagggacaaaattccgaagggacttttccgaa 19368089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 21794602 - 21794701
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||         |||| ||||| ||||||||||||||||||||||    
T  21794602 aagagtttaaggataattaagcaaactttgttgtaatagggactaatattagaagtaattttttt--tgtaaggacttaaaaacctattaaaattaagta 21794699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 26805518 - 26805461
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  26805518 aagagtttaaggataattaaacaaactttgttgtaatagggattaaaattagaagtaa 26805461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 35531054 - 35531111
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  35531054 aagagtttaaggataattaaacaaactttgttgtaacagggactaaaattagaagtaa 35531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 28701192 - 28701284
Alignment:
Q  273 aggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||||||         || ||||||| ||||||||||||||||||||||||    
T  28701192 aggatagttaaacaaactttgttgtaacagggactaaaattagaagtaatttattttttgcagggactaaaaaacctattaaaattaagtaag 28701284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 46517199 - 46517093
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| | | ||||||||| |||||||         |||||||||| ||| | ||||||||||||||||    
T  46517199 aagagtttaaggataattaaacaaactttgttgtaagatggactaaaattcgaagtaattttttttttgtagggactaaaatatctattaaaattaagta 46517100  T
Q  364 agaatta 370  Q
    || ||||    
T  46517099 aggatta 46517093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 12368270 - 12368213
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  12368270 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagtaa 12368213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 36248592 - 36248649
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  36248592 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaagtaa 36248649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 29231375 - 29231428
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||| ||||||||||||||||||||||| || |||| |||||||||||||    
T  29231375 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattagaa 29231428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 33708972 - 33708915
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  33708972 aagagtttaaggataattaaacaaactttgttttagaagggactaaaattagaagtaa 33708915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 43505035 - 43505135
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||| |||||||||| | | ||||||||| |||||||         ||||| |||| ||||||||||||||||||||||    
T  43505035 aagagtttaaggataattaaacaaattttgttgtaagaaggactaaaatttgaagtaattcttttt-tgtagagactaaaaaacctattaaaattaagta 43505133  T
Q  364 ag 365  Q
    ||    
T  43505134 ag 43505135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 47110454 - 47110405
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  47110454 aagggacaaaaattaccgaagcgacaaaattccgaagggactttttcgaa 47110405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 15053896 - 15053944
Alignment:
Q  273 aggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  15053896 aggataattaaacaaactttgttttagtagggactaaaattagaagtaa 15053944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 20430019 - 20429979
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20430019 aagggacaaaaattaccgaagggacaaaattccgaagggac 20429979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 37986771 - 37986719
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattaga 316  Q
    |||||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  37986771 aagagtttaaggataattaaacaaactttgttttagtagggactaaaattaga 37986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 26020428 - 26020373
Alignment:
Q  262 tcaagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    |||||||||| | ||||||||||||||||||||||||| ||  |||||||||||||    
T  26020428 tcaagagtttaatgataattaaacaaactttgttgtaacagagactaaaattagaa 26020373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 11999986 - 12000043
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||| ||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  11999986 aagactttaaggataattaaacaaactttgttttagcagggactaaaattagaagtaa 12000043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 30719683 - 30719724
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  30719683 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 30719724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 43504970 - 43505011
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  43504970 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 43505011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 46517264 - 46517223
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  46517264 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 46517223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 51561439 - 51561398
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  51561439 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 51561398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 52493797 - 52493854
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| ||||| |||||||||||    
T  52493797 aagagtttaaggataattaaacaaactttgttttaggagggactaatattagaagtaa 52493854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 47008682 - 47008603
Alignment:
Q  285 caaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    ||||||||||||||| | | |||||||||||||||||         |||||||||| ||||||||||||||||||||||||    
T  47008682 caaactttgttgtaacatggactaaaattagaagtaattcttttt-tgtagggactaaaaaacctattaaaattaagtaag 47008603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 2059615 - 2059665
Alignment:
Q  267 agttttaggataattaaacaaactttgttgtaataggaactaaaattagaa 317  Q
    ||||| |||||||||||||||| |||||| ||| |||| ||||||||||||    
T  2059615 agtttaaggataattaaacaaattttgttttaacaggatctaaaattagaa 2059665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 26020491 - 26020449
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtca 264  Q
    |||||| ||||||||||||||||||||| || |||||||||||    
T  26020491 aaattttagtaaatgaacctttcatagtgttataaacttgtca 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 31400425 - 31400463
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  31400425 attttagtaaatgaacctttcatagtgttctaaacttgt 31400463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 10041267 - 10041210
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | ||||||||||||||||||  ||||| ||| |||||||||||| ||||    
T  10041267 aagagtttaaagataattaaacaaactttaatgtaacagggactaaaattagatgtaa 10041210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 19791506 - 19791563
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | |||||||||||||||||||| |||| | | |||||| ||||||||||    
T  19791506 aagagtttaaagataattaaacaaactttgtcgtaacaaggactaaacttagaagtaa 19791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 23191542 - 23191469
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggag 205  Q
    ||||||||||||||||| | | ||||||| ||| |||   ||| |||| ||| |||||||||||||||||||||    
T  23191542 gttctttgacaactcaaaagatcttttggggtgagaagaagtgaggaaagagagctctatttataggtgaggag 23191469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 33707395 - 33707346
Alignment:
Q  265 agagttttaggataattaaacaaactttgttgtaataggaactaaaatta 314  Q
    ||||||| ||||||||||||||||||||||| ||| | | ||||||||||    
T  33707395 agagtttaaggataattaaacaaactttgttttaacatggactaaaatta 33707346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 33709037 - 33708996
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  33709037 aaattttagtaattgaacctttcatagtgttctaaacttgtc 33708996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 36367905 - 36367860
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||||||||||||||| ||  ||| |||||||||||||||||    
T  36367905 ataattaaacaaactttgttttagcagggactaaaattagaagtaa 36367860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 39681998 - 39682039
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  39681998 aaattttagtaaatgaacctttcatagtgttttaaacttgtc 39682039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 47008739 - 47008698
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||| ||||||||||||| |||||||||||||    
T  47008739 aaattttagtaaataaacctttcatagtgttctaaacttgtc 47008698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 52493731 - 52493772
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||| ||||||    
T  52493731 aaattttagtaaatgaacctttcatagtgttctaaccttgtc 52493772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 893 - 978
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaa 217  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  893 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaa 978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 33233 - 33317
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaa 216  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33233 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaa 33317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 33112 - 33162
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    ||||||||||||||| | ||||||||||||||||| ||| ||||||||||||    
T  33112 caaagggacaaaatt-atcgaagggacaaaattccaaagtgacttttccgaa 33162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 39725 - 39818
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39725 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgaggaatgagggctctatttataggtgaggaggttgatg-aaaatggaaaatt 39818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 86204 - 86298
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  86204 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaagaaaggaaaatt 86298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 32737 - 32831
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  32737 gttctttgataactcaaaagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggatgttgatgaaaaaaggaaaatt 32831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 32620 - 32666
Alignment:
Q  16 ggacaaaatttaccgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  32620 ggacaaaaatttccgaagggacaaaattccgaagggacttttccgaa 32666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 901 - 993
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 224  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  901 gttctttgacaactcaagagaactttttgtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 780 - 815
Alignment:
Q  27 accgaagggacaaaattccgaagggacttttccgaa 62  Q
    |||||||||||||||||| |||||||||||||||||    
T  780 accgaagggacaaaattctgaagggacttttccgaa 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7323 - 7395
Alignment:
Q  154 cttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7323 cttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 7395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 18257 - 18307
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatga 182  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  18257 gttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatga 18307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 18151 - 18191
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  18151 aagggacaaaaattaccgaagagacaaaattccgaagggac 18191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 16204 - 16109
Alignment:
Q  132 gttctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16204 gttctttgacaactcaagagaactttttggtgtgtcaaattgtgtggaatgagggctctatttacaggtgaggaggttgatgaaaaatggaaaatt 16109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 66364 - 66269
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgag-gaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  66364 gttctttgacaactcaagagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgagaaaggttgatgaaaattggaaaatt 66269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 9459 - 9365
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    ||||||||||||||||| | ||||||| |||||| |||||||||| ||| || |||||||||||||||||| || ||||||||||||||||||||    
T  9459 gttctttgacaactcaagagaacttttagtgtgtcaaattgtgtgaaatcagagctctatttataggtgagcagattgatgaaaaatggaaaatt 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 9566 - 9525
Alignment:
Q  11 caaagggacaaaatttaccgaagggacaaaattccgaagggac 53  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  9566 caaagggagaaaatt-accgaagggacaaaattccgaagggac 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 370
Target Start/End: Complemental strand, 5946 - 5839
Alignment:
Q  262 tcaagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaag 361  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||| ||||| ||||||||||||||    
T  5946 tcaagagtttaaggataattaaacaaactttgttgtaatagggactaaaattagaagtaattcttttt-tgtagggactaaaaaatctattaaaattaag 5848  T
Q  362 taagaatta 370  Q
    |||| ||||    
T  5847 taaggatta 5839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 6009 - 5968
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| ||| |||||||||    
T  6009 aaattttagtaaatgaacctttcatagtgttccaaacttgtc 5968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 7125 - 7217
Alignment:
Q  135 ctttgacaactcaatacaactttt-ggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaatt 226  Q
    |||||||||||||| | ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||  |||||||||||  |||||||    
T  7125 ctttgacaactcaagagaactttttggtttgtgaaattgtgtggaatgaggactctatttataggtgaggatcttgatgaaaaaaagaaaatt 7217  T

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Target: scaffold0351; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 6999 - 7041
Alignment:
Q  13 aagggacaaaatttaccgaagggacaaaattccgaagggactt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6999 aagggacaaaagttaccgaagggacaaaattccgaagggactt 7041  T

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Target: scaffold1190 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 229 - 129
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||         |||| ||||| ||||||||||||||||||||||    
T  229 aagagtttaaggataattaaacaaactttgttgtaacaaggactaaaattagaagtaattttcttt-tgtaaggactaaaaaacctattaaaattaagta 131  T
Q  364 ag 365  Q
    ||    
T  130 ag 129  T

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Target: scaffold1160 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 1428 - 1484
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  1428 aagagtttaaggataattaaacaaactttgttgtaatagggactaaaa-tagaagtaa 1484  T

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Target: scaffold1160; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 1363 - 1402
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttg 261  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  1363 aaattttagtaaatgaacctttcatagtgttctaaacttg 1402  T

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Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 6197 - 6108
Alignment:
Q  275 gataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaag 365  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||         |||| ||||| ||||||||||||||||||||||||    
T  6197 gataattaaacaaactttgttgtaacaaggactaaaattagaagtaattttcttt-tgtaaggactaaaaaacctattaaaattaagtaag 6108  T

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Target: scaffold0514; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 6266 - 6227
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttg 261  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  6266 aaattttagtaaatgaacctttcatagtgttctaaacttg 6227  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 17404 - 17299
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagta 363  Q
    |||||||| |||||||||||||||||||| || || |||| |||||||||| ||||||         |||||||||| ||||| ||||||||||||||||    
T  17404 aagagtttaaggataattaaacaaactttattttagtagggactaaaattaaaagtaatttatttt-tgtagggactaaaaaaactattaaaattaagta 17306  T
Q  364 agaatta 370  Q
    || ||||    
T  17305 aggatta 17299  T

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Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 25084 - 25027
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| | ||||||||||||||||||||| || |||| |||||||||||||||||    
T  25084 aagagtttaacgataattaaacaaactttgttttagtagggactaaaattagaagtaa 25027  T

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Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 24059 - 24103
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagta 320  Q
    |||||||||||||||||||| ||  ||| ||||||||||||||||    
T  24059 ataattaaacaaactttgttttagaagggactaaaattagaagta 24103  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 240030 - 239982
Alignment:
Q  273 aggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  240030 aggataattaaacaaactttgttttagtagggactaaaattagaagtaa 239982  T

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Target: scaffold0385 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 9987 - 9932
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagt 319  Q
    |||||||| || |||||||||||||||||||| || |||| |||||||||||||||    
T  9987 aagagtttaagaataattaaacaaactttgttttagtagggactaaaattagaagt 9932  T

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Target: scaffold0571 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 370
Target Start/End: Original strand, 8733 - 8824
Alignment:
Q  276 ataattaaacaaactttgttgtaataggaactaaaattagaagtaannnnnnnnctgtagggactgaaaaacctattaaaattaagtaagaatta 370  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||         |||||||||| ||||| |||||||||||||||||| ||||    
T  8733 ataatcaaacaaactttgttgtaagagggactaaaattagaagtaattttttt--tgtagggact-aaaaaactattaaaattaagtaaggatta 8824  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 158055 - 158001
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaag 318  Q
    |||||||| |||| |||||||||||||||||||||| ||| | ||||||||||||    
T  158055 aagagtttaaggagaattaaacaaactttgttgtaacaggtagtaaaattagaag 158001  T

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Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 158119 - 158078
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  158119 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 158078  T

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Target: scaffold1191 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 937 - 994
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| || ||||| ||||||||||| |||||| ||| |||||||||||||||||    
T  937 aagagtttaagaataatcaaacaaacttttttgtaagagggactaaaattagaagtaa 994  T

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Target: scaffold0651 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 6889 - 6833
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  6889 aagagtttaaggataattaaacaaactttgttttagcagg-actaaaattagaagtaa 6833  T

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Target: scaffold0651; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 6954 - 6913
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  6954 aaattttagtaattgaacctttcatagtgttctaaacttgtc 6913  T

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Target: scaffold0562 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 4063 - 4022
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  4063 aaattttagtaaatgaacctttcatagtgttctaaacttgtc 4022  T

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Target: scaffold0562; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 3825 - 3786
Alignment:
Q  331 tgtagggactgaaaaacctattaaaattaagtaagaatta 370  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  3825 tgtagggactaaaaaacctattaaaattaagtaaggatta 3786  T

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Target: scaffold0640 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 3982 - 3944
Alignment:
Q  224 atttgagtaaatgaacctttcatagttttctaaacttgt 262  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  3982 attttagtaaatgaacctttcatagtgttctaaacttgt 3944  T

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Target: scaffold0809 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 786 - 729
Alignment:
Q  264 aagagttttaggataattaaacaaactttgttgtaataggaactaaaattagaagtaa 321  Q
    |||||||| ||||||||||||||||||||| |  |  | |||||||||||||||||||    
T  786 aagagtttaaggataattaaacaaactttggttgagcatgaactaaaattagaagtaa 729  T

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Target: scaffold0125 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 21842 - 21801
Alignment:
Q  222 aaatttgagtaaatgaacctttcatagttttctaaacttgtc 263  Q
    |||||| ||||||||||||||| ||||| |||||||||||||    
T  21842 aaattttagtaaatgaaccttttatagtgttctaaacttgtc 21801  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 43751 - 43815
Alignment:
Q  132 gttctttgacaactcaatacaacttttggtgtgtgaaattgtgtggaatgagggctctatttatag 197  Q
    ||||||||||||||||| | ||||||| | |||| ||||| || || |||||||||||||||||||    
T  43751 gttctttgacaactcaagagaactttttg-gtgttaaattatgagggatgagggctctatttatag 43815  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 14511 - 14479
Alignment:
Q  26 taccgaagggacaaaattccgaagggacttttc 58  Q
    ||||||||||||||||||||||||| |||||||    
T  14511 taccgaagggacaaaattccgaaggaacttttc 14479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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