View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18278_low_62 (Length: 257)
Name: NF18278_low_62
Description: NF18278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18278_low_62 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 22 - 257
Target Start/End: Original strand, 38118525 - 38118760
Alignment:
| Q |
22 |
gcttgggacaatgttgagtcaagacatactcaaagccttgcaatcaaagctcaccaaaattacacaatcaaacctccaacaacctcagatagagtcatag |
121 |
Q |
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| T |
38118525 |
gcttgggacaatgttgagtcaagacatactcaaagccttgcaatcaaagctcaccaaaattacacaatcaaacctccaacaacctcagatagagtcatag |
38118624 |
T |
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| Q |
122 |
ttttgctcaacacacaaaacactatagacaatgttcgtcattggtctgttaacaacgtatcatttttccttcctcacaccccttatcttgttgcacttaa |
221 |
Q |
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| T |
38118625 |
ttttgctcaacacacaaaacactatagacaatgttcgtcattggtctgttaacaacgtatcatttttccttcctcacaccccttatcttgttgcacttaa |
38118724 |
T |
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| Q |
222 |
agagaatataactggtgaattcaaccaaacacctcc |
257 |
Q |
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| T |
38118725 |
agagaatataactggtgaattcaaccaaacacctcc |
38118760 |
T |
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