View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18278_low_73 (Length: 239)
Name: NF18278_low_73
Description: NF18278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18278_low_73 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 19395751 - 19395530
Alignment:
| Q |
1 |
accattgagttgatccgatgaaagacatctca--gaaattttggaagcaagaaaaccaagtaaaatggagatttgaagtccaaacaacttgagaaatttt |
98 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19395751 |
accattgagttgatccgatgaaagacatctcatagaaattttggaagcaagaaaaccaagtaaaatggagatttgaagtccaaacaacttgagaaatttt |
19395652 |
T |
|
| Q |
99 |
gtcacaaatcccaagcacatgccaaaagataaaataccatgaagagtgagaaatcgagagaaaacttggagagttttttcagaagatgttatgattagat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |
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| T |
19395651 |
gtcacaaatcccaagcacatgccaaaagataaaataccatgaagagtgagaaatcgagagaaaact---agagttttttcataagatgttatgattagat |
19395555 |
T |
|
| Q |
199 |
tatactttagtcttaagttttaatc |
223 |
Q |
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||||||||||||||||||||||||| |
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| T |
19395554 |
tatactttagtcttaagttttaatc |
19395530 |
T |
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