View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18278_low_83 (Length: 217)
Name: NF18278_low_83
Description: NF18278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18278_low_83 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16521955 - 16522171
Alignment:
| Q |
1 |
ttgcgagtgaaaacaacaaaagatccaatctgtgttctaacaaacttttgcctaaatgcatgaaactcatataaagaatctaaattcttcaatcagtccg |
100 |
Q |
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| T |
16521955 |
ttgcgagtgaaaacaacaaaagattcaatctgtgttctaacaaacttttgcctaaatgcatgaaactcatataaagaatctaaattcttcaatcagtccg |
16522054 |
T |
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| Q |
101 |
catgaactttttcaagatcttcttcaagaagtaatcaagaaaatgaaagaactgtggttaggaaagctagttcaatctcaacggagagattaatactctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
16522055 |
catgaactttttcaagatcttcttcaagaagtaatcaagaaaatgaaagaactgtggttaggaaagctagttcaatctcaacggagagattgatactctt |
16522154 |
T |
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| Q |
201 |
aactccgagattgtact |
217 |
Q |
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||||||||||||||||| |
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| T |
16522155 |
aactccgagattgtact |
16522171 |
T |
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