View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18279_high_8 (Length: 383)
Name: NF18279_high_8
Description: NF18279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18279_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 14735710 - 14736056
Alignment:
| Q |
1 |
tcaacaagtaagtattggcgttattaagtgaagcataatatttgagagcatgattatgtatacggtatgtgtgggtagtatgctaacccttaatgtatgg |
100 |
Q |
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| T |
14735710 |
tcaacaagtaagtattggcgttattaagcgaagcataatatttgagagcatgattatgtatatggtatgtgtgggtagtatgctaacccttaatgtatgg |
14735809 |
T |
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| Q |
101 |
gaagacccgttctctagagtaacgtttagagtaatgtctttcacaaaggaaattatgtattctaaggaagtatgttcaaaaagggtattaggatataagg |
200 |
Q |
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| T |
14735810 |
gaagacccgttctctagagtaatgtttagagtaatgtctttcacaaaggaaattatgtattctaaggaagtatgttcaaaaagggtattaggatataagg |
14735909 |
T |
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| Q |
201 |
aagagaaaaattcaactagataaaggaatgtttcgtgactacatttagagatacttcatgaggtaagccatccaccgtactaccttgcgttctgtgtgct |
300 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
14735910 |
aagataaaaattcaactagataaaggaatgtttcgtgactacatatagagatacttcatgaggtaagccatccaccgtactaccttgcattctgtgtgct |
14736009 |
T |
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| Q |
301 |
cattagatggtgtactaaaactcgaaaggaaacgatgcttaatatat |
347 |
Q |
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|||||| ||||||||||||||||||| |||||||||||||||||||| |
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| T |
14736010 |
cattagttggtgtactaaaactcgaacggaaacgatgcttaatatat |
14736056 |
T |
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