View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18282_low_15 (Length: 332)
Name: NF18282_low_15
Description: NF18282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18282_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 10 - 317
Target Start/End: Original strand, 45132875 - 45133182
Alignment:
| Q |
10 |
catcatcagactgaaaagcagggccaaattgttaaaaaatcaaaacatgagaaacacacatgagaaacgaaagtagttttagacaaaccttcagtttgct |
109 |
Q |
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| T |
45132875 |
catcatcagactgaaaagcagggccaaattgttaaaaaatcaaaacatgagaaacacacatgagaaacgaaagtagttttagacaaaccttcagtttgct |
45132974 |
T |
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| Q |
110 |
aaaagcaggctgttcaagtgaaattttcatgtcatcatccaaatctgatcaagttatgtataaatcaattaataagtaaaagtgatcagccaaaattacc |
209 |
Q |
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| T |
45132975 |
aaaagcaggctgttcaagtgaaattttcatgtcatcatccaaatctgatcaagttatgtataaatcaattaataagtaaaagtgatcagccaaaattacc |
45133074 |
T |
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| Q |
210 |
acaacagaaaatctagaatcagtaaataactaattaccatccccaagtatagcagtcttgaaaaaatgatgcatatccaatgcatgactttgtgatttta |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45133075 |
acaacagaaaatctagaatcagtaaataactaattaccatccccaagtatagcagtcttgaaaaaatgatgcatatccaatgcatgactttgtgatttta |
45133174 |
T |
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| Q |
310 |
tacattct |
317 |
Q |
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|||||||| |
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| T |
45133175 |
tacattct |
45133182 |
T |
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