View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18283_high_14 (Length: 230)
Name: NF18283_high_14
Description: NF18283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18283_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 44704203 - 44704402
Alignment:
| Q |
19 |
gtatggctatcaatttcttctgctcttttaacatcatggattccagctttctcagtgtcgctttctttattattctcttgtacaattcgcttggggagag |
118 |
Q |
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| T |
44704203 |
gtatggctatcaatttcttctgctcttttaacatcatggattccagctttctcagtgtcgctttctttattattctcttgtacaattcgcttggggagag |
44704302 |
T |
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| Q |
119 |
tcacgtaaaggattcccccatcgaattttccggctatgttatcaatctcagaatcatttggttctggaaaactcaggtgaaaacgaacacgtctctgctc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
44704303 |
tcacgtaaaggattcccccatcgaattttccggctatgttatcaatctcagaatcatttggttctggaaaactcaggtgaaaacgaacacgtttctgctc |
44704402 |
T |
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