View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18284_low_17 (Length: 249)
Name: NF18284_low_17
Description: NF18284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18284_low_17 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 15629402 - 15629633
Alignment:
| Q |
18 |
gtttgaagatctcttgtttttgactccccagatggttatcatgttggtaaagtcaatgctttcgagtaaattggatcattatgttataagtaggtttctt |
117 |
Q |
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| T |
15629402 |
gtttgaagatctcttgtttttgactccccagatggttatcatgttggtaaagtcaatgctttcgagtaaattggatcattatgttataagtaggtttctt |
15629501 |
T |
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| Q |
118 |
ctgtattatcagaaggcgaaattcgccactgctactacagatgagaagtgcaaaatcattgaaatggtcatagatatgcattacgaaatagaccggagtt |
217 |
Q |
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| T |
15629502 |
ctgtattatcagaaggcgaaattcgccactgctactacagatgagaagtgcaaaatcattgaaatggtcatagatatgcattacgaaatagaccggaatt |
15629601 |
T |
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| Q |
218 |
ctgtttcgttcaagacattatttgggattctt |
249 |
Q |
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| T |
15629602 |
ctgtttctttcaaaacattatttgggattctt |
15629633 |
T |
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