View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18284_low_6 (Length: 371)
Name: NF18284_low_6
Description: NF18284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18284_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 35677900 - 35678262
Alignment:
| Q |
1 |
ccattctcttcttctcagcctttgaaaccttcttcttcttagccctctccaaaacctcctcagtaacattaccatacccaacacctgcatgtgtaaaccc |
100 |
Q |
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| T |
35677900 |
ccattctcttcttctcagcctttgaaaccttcttcttcttagccctctccaaaacctcctcagtaacattaccatacccaacacctgcatgtgtaaaccc |
35677999 |
T |
|
| Q |
101 |
atccaaatcaaccttatcatcattttcttcaccaagtaacatagcttccaattcctcagaatcccaatcagactcatcatcaattgacccattatcctct |
200 |
Q |
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| T |
35678000 |
atccaaatcaaccttatcatcattttcttcaccaagtaacatagcttccaattcctcagaatcccaatcagactcatcatcaattgacccattatcctct |
35678099 |
T |
|
| Q |
201 |
tcttcacattcatcctcttcatcatctaattcataatcctccttagaaaatgtttcaatttttacctctttttgttggtaaaaaccagggagatttggat |
300 |
Q |
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||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35678100 |
tcttcaccatcatcctcttcatcatctaattcataatcctcctcagaaaatgtttcaatttttacctctttttgttggtaaaaaccagggagatttggat |
35678199 |
T |
|
| Q |
301 |
cagtatcttgcatgaaaattccacaaccagggcaaatgggtccaagagcttcatcttcatctc |
363 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35678200 |
cattatcttgcatgaaaattccacaaccagggcaaatgggtccaagagcttcatcttcatctc |
35678262 |
T |
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