View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18285_high_13 (Length: 364)

Name: NF18285_high_13
Description: NF18285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18285_high_13
NF18285_high_13
[»] chr4 (37 HSPs)
chr4 (212-364)||(2335061-2335214)
chr4 (60-111)||(2332705-2332756)
chr4 (103-178)||(2333905-2333979)
chr4 (26-65)||(52870639-52870678)
chr4 (26-60)||(49228721-49228755)
chr4 (26-63)||(17339075-17339112)
chr4 (26-62)||(20391440-20391476)
chr4 (26-62)||(26626005-26626041)
chr4 (26-61)||(32032996-32033031)
chr4 (26-65)||(33413513-33413552)
chr4 (26-57)||(50424857-50424888)
chr4 (26-65)||(52977977-52978016)
chr4 (27-62)||(55631997-55632032)
chr4 (26-60)||(4035825-4035859)
chr4 (26-60)||(5375560-5375594)
chr4 (26-60)||(5743662-5743696)
chr4 (26-60)||(9328243-9328277)
chr4 (26-60)||(30771528-30771562)
chr4 (26-60)||(34273222-34273256)
chr4 (26-60)||(35675923-35675957)
chr4 (26-60)||(41191631-41191665)
chr4 (26-60)||(44294789-44294823)
chr4 (26-60)||(45742809-45742843)
chr4 (26-60)||(47806860-47806894)
chr4 (26-60)||(50352064-50352098)
chr4 (26-60)||(55632262-55632296)
chr4 (27-64)||(2615679-2615716)
chr4 (27-60)||(4036089-4036122)
chr4 (27-60)||(4549629-4549662)
chr4 (27-60)||(20747434-20747467)
chr4 (27-60)||(29014064-29014097)
chr4 (27-60)||(39144668-39144701)
chr4 (26-54)||(422931-422959)
chr4 (28-60)||(14794027-14794059)
chr4 (26-62)||(29520167-29520203)
chr4 (26-62)||(39670989-39671025)
chr4 (28-60)||(53277190-53277222)
[»] chr6 (16 HSPs)
chr6 (220-346)||(10319669-10319795)
chr6 (26-61)||(10195996-10196031)
chr6 (27-65)||(9388524-9388562)
chr6 (26-60)||(19097804-19097838)
chr6 (26-63)||(8743185-8743222)
chr6 (26-62)||(23398142-23398178)
chr6 (26-60)||(231108-231142)
chr6 (26-60)||(4844400-4844434)
chr6 (26-60)||(9038642-9038676)
chr6 (26-60)||(11847835-11847869)
chr6 (26-60)||(30248647-30248681)
chr6 (26-60)||(34301835-34301869)
chr6 (27-60)||(34741730-34741763)
chr6 (26-62)||(287417-287453)
chr6 (28-60)||(12144043-12144075)
chr6 (26-62)||(31091443-31091479)
[»] chr3 (36 HSPs)
chr3 (26-63)||(50647947-50647984)
chr3 (26-64)||(45252769-45252807)
chr3 (27-62)||(16434975-16435010)
chr3 (27-62)||(36005768-36005803)
chr3 (26-65)||(51284065-51284104)
chr3 (26-60)||(4024052-4024086)
chr3 (26-60)||(7181350-7181384)
chr3 (26-60)||(9499500-9499534)
chr3 (26-60)||(10220933-10220967)
chr3 (26-60)||(12050395-12050429)
chr3 (26-60)||(14428610-14428644)
chr3 (26-60)||(16435239-16435273)
chr3 (26-60)||(21756486-21756520)
chr3 (26-60)||(22103932-22103966)
chr3 (26-60)||(25149125-25149159)
chr3 (26-60)||(26593768-26593802)
chr3 (27-65)||(26806110-26806148)
chr3 (26-60)||(35868086-35868120)
chr3 (26-60)||(37728713-37728747)
chr3 (26-60)||(43868103-43868137)
chr3 (26-60)||(44543782-44543816)
chr3 (26-60)||(46049989-46050023)
chr3 (27-65)||(50647679-50647717)
chr3 (26-64)||(50726786-50726824)
chr3 (26-64)||(50786024-50786062)
chr3 (27-60)||(4024315-4024348)
chr3 (26-63)||(8321922-8321959)
chr3 (27-60)||(9779979-9780012)
chr3 (27-60)||(14428873-14428906)
chr3 (27-60)||(20862461-20862494)
chr3 (27-60)||(31531415-31531448)
chr3 (27-60)||(33868712-33868745)
chr3 (27-60)||(52058985-52059018)
chr3 (26-63)||(53361591-53361628)
chr3 (23-60)||(54604588-54604625)
chr3 (23-55)||(14758843-14758875)
[»] chr7 (25 HSPs)
chr7 (26-65)||(19920558-19920597)
chr7 (26-60)||(18113169-18113203)
chr7 (27-60)||(29176992-29177025)
chr7 (26-66)||(25247693-25247733)
chr7 (26-65)||(33858869-33858908)
chr7 (26-65)||(48521024-48521063)
chr7 (26-60)||(6387325-6387359)
chr7 (26-60)||(21295151-21295185)
chr7 (26-60)||(26255096-26255130)
chr7 (26-60)||(29286040-29286074)
chr7 (26-60)||(29643146-29643180)
chr7 (26-60)||(32814433-32814467)
chr7 (26-60)||(32872378-32872412)
chr7 (26-60)||(36698134-36698168)
chr7 (27-65)||(38428411-38428449)
chr7 (26-60)||(38858298-38858332)
chr7 (26-60)||(39197718-39197752)
chr7 (26-60)||(39871616-39871650)
chr7 (26-60)||(40300230-40300264)
chr7 (26-60)||(41026099-41026133)
chr7 (26-60)||(41252364-41252398)
chr7 (26-60)||(49045123-49045157)
chr7 (23-60)||(1275733-1275770)
chr7 (27-60)||(20075111-20075144)
chr7 (27-60)||(28060981-28061014)
[»] chr1 (39 HSPs)
chr1 (26-65)||(46075870-46075909)
chr1 (26-60)||(14171542-14171576)
chr1 (26-62)||(23541977-23542013)
chr1 (26-62)||(36694852-36694888)
chr1 (26-62)||(36710953-36710989)
chr1 (26-70)||(39363197-39363241)
chr1 (26-65)||(30290260-30290299)
chr1 (26-65)||(44649624-44649663)
chr1 (28-63)||(47296550-47296585)
chr1 (26-60)||(943640-943674)
chr1 (26-60)||(1039384-1039418)
chr1 (26-60)||(1046290-1046324)
chr1 (26-60)||(4102717-4102751)
chr1 (26-60)||(6089735-6089769)
chr1 (26-64)||(7783987-7784025)
chr1 (26-60)||(11741397-11741431)
chr1 (26-60)||(15811235-15811269)
chr1 (26-60)||(37951952-37951986)
chr1 (26-60)||(38920239-38920273)
chr1 (26-60)||(39497433-39497467)
chr1 (26-60)||(45039412-45039446)
chr1 (26-60)||(48067898-48067932)
chr1 (26-60)||(49907021-49907055)
chr1 (26-60)||(52431177-52431211)
chr1 (27-60)||(1047992-1048025)
chr1 (27-60)||(9202245-9202278)
chr1 (28-65)||(11907235-11907272)
chr1 (23-60)||(16576092-16576129)
chr1 (27-60)||(23542243-23542276)
chr1 (26-59)||(30289865-30289898)
chr1 (27-60)||(39362934-39362967)
chr1 (27-60)||(39497697-39497730)
chr1 (27-60)||(39750121-39750154)
chr1 (26-63)||(43456624-43456661)
chr1 (27-60)||(44646535-44646568)
chr1 (27-60)||(44649893-44649926)
chr1 (26-62)||(4280129-4280165)
chr1 (24-60)||(25227304-25227340)
chr1 (28-60)||(52601991-52602023)
[»] chr8 (31 HSPs)
chr8 (26-60)||(29598224-29598258)
chr8 (26-60)||(38878721-38878755)
chr8 (27-64)||(43653939-43653976)
chr8 (28-63)||(18455717-18455752)
chr8 (26-65)||(28192178-28192217)
chr8 (26-61)||(42885053-42885088)
chr8 (26-60)||(51098-51132)
chr8 (26-60)||(1774342-1774376)
chr8 (26-60)||(2944275-2944309)
chr8 (26-60)||(8251936-8251970)
chr8 (26-60)||(8951431-8951465)
chr8 (26-60)||(13153928-13153962)
chr8 (27-61)||(13154192-13154226)
chr8 (26-60)||(17856779-17856813)
chr8 (26-60)||(18754144-18754178)
chr8 (26-60)||(26016569-26016603)
chr8 (26-60)||(28572046-28572080)
chr8 (26-60)||(28579639-28579673)
chr8 (26-60)||(32675760-32675794)
chr8 (26-60)||(34568490-34568524)
chr8 (26-60)||(39029178-39029212)
chr8 (26-63)||(5162301-5162338)
chr8 (26-63)||(11798602-11798639)
chr8 (27-60)||(11798869-11798902)
chr8 (27-60)||(29279460-29279493)
chr8 (26-63)||(32522846-32522883)
chr8 (27-60)||(40530410-40530443)
chr8 (27-60)||(44250859-44250892)
chr8 (27-63)||(28864244-28864280)
chr8 (23-62)||(29279193-29279233)
chr8 (26-62)||(44888678-44888714)
[»] scaffold0604 (1 HSPs)
scaffold0604 (26-63)||(3785-3822)
[»] chr5 (17 HSPs)
chr5 (27-60)||(32147555-32147588)
chr5 (26-62)||(13660859-13660895)
chr5 (26-60)||(1265949-1265983)
chr5 (26-60)||(6673231-6673265)
chr5 (26-60)||(7951562-7951596)
chr5 (26-60)||(9020694-9020728)
chr5 (26-60)||(9828393-9828427)
chr5 (26-60)||(10734526-10734560)
chr5 (26-60)||(14913648-14913682)
chr5 (26-60)||(16127259-16127293)
chr5 (26-60)||(22527692-22527726)
chr5 (26-60)||(26894876-26894910)
chr5 (26-60)||(34662204-34662238)
chr5 (26-60)||(40004412-40004446)
chr5 (27-60)||(186362-186395)
chr5 (27-60)||(9828657-9828690)
chr5 (28-60)||(16440931-16440963)
[»] chr2 (26 HSPs)
chr2 (26-62)||(17408297-17408333)
chr2 (26-60)||(2438225-2438259)
chr2 (26-60)||(7491844-7491878)
chr2 (26-60)||(8716895-8716929)
chr2 (26-60)||(11201683-11201717)
chr2 (26-60)||(20252210-20252244)
chr2 (26-60)||(27560206-27560240)
chr2 (26-60)||(34062668-34062702)
chr2 (26-60)||(34113789-34113823)
chr2 (26-60)||(34883851-34883885)
chr2 (26-60)||(36131031-36131065)
chr2 (26-60)||(40607702-40607736)
chr2 (26-60)||(41450516-41450550)
chr2 (26-63)||(2200243-2200280)
chr2 (27-60)||(2438489-2438522)
chr2 (26-63)||(3095296-3095333)
chr2 (27-60)||(7492108-7492141)
chr2 (27-60)||(16108215-16108248)
chr2 (27-60)||(22897655-22897688)
chr2 (27-60)||(39833739-39833772)
chr2 (27-60)||(45474351-45474384)
chr2 (28-60)||(12872986-12873018)
chr2 (26-62)||(20727861-20727897)
chr2 (28-60)||(22182929-22182961)
chr2 (26-58)||(24300354-24300386)
chr2 (26-58)||(42629373-42629405)
[»] scaffold0122 (1 HSPs)
scaffold0122 (26-60)||(12065-12099)
[»] scaffold0029 (1 HSPs)
scaffold0029 (26-60)||(51685-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (26-60)||(47640-47674)
[»] scaffold0008 (1 HSPs)
scaffold0008 (26-60)||(259125-259159)
[»] scaffold0002 (1 HSPs)
scaffold0002 (26-60)||(355334-355368)
[»] scaffold0025 (1 HSPs)
scaffold0025 (27-60)||(65378-65411)
[»] scaffold0308 (1 HSPs)
scaffold0308 (28-60)||(5292-5324)
[»] scaffold0097 (1 HSPs)
scaffold0097 (26-62)||(31690-31726)
[»] scaffold0005 (1 HSPs)
scaffold0005 (28-60)||(45672-45704)


Alignment Details
Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 364
Target Start/End: Original strand, 2335061 - 2335214
Alignment:
Q  212 aaattcgctcttctttacat-attatttagctaggttttgtatgagttatttaaaaggaaatgaattgccgctattttcgataaaagaaagtggcgatat 310  Q
    |||| |||||||||||| || ||||||||||||  |||||||  |||||||| ||||||||  |||| ||| |||||| |||||||| || |||| ||||    
T  2335061 aaatccgctcttctttatattattatttagctatcttttgtacaagttatttgaaaggaaagaaattaccgttatttttgataaaagtaaatggcaatat 2335160  T
Q  311 ctcatttgtttgataaactaaagttgttatcattttgatggtcaaacaaaatat 364  Q
    |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||    
T  2335161 ctcatttgttcgataaattaaagttgttattattttgatggtcaagcaaaatat 2335214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 2332705 - 2332756
Alignment:
Q  60 agtattgatcatatgtttatgggatgcaactattttggaagcatttgattct 111  Q
    |||||||||||||||||| |||| ||||| | ||||||||||||||||||||    
T  2332705 agtattgatcatatgtttttgggctgcaattgttttggaagcatttgattct 2332756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 2333905 - 2333979
Alignment:
Q  103 tttgattcttagtaaggcattgtattggttacaaattcactcagcgaatctgttacatcagtttgatcaacttttg 178  Q
    |||||||||||||||||||||| ||||| ||||||||||||  | |||| |||||||||| |||| ||||| ||||    
T  2333905 tttgattcttagtaaggcattgaattggctacaaattcacttggtgaat-tgttacatcaatttggtcaacatttg 2333979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 52870678 - 52870639
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  52870678 tcaaaagggtcttataattagagacggagggagtattatt 52870639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 49228721 - 49228755
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagggagta 49228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 17339112 - 17339075
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    |||||||||||||||||||||||||||||| |||||||    
T  17339112 tcaaaagggtcttataattagagacggaggtagtagta 17339075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 20391440 - 20391476
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  20391440 tcaaaagggtcttataattagggacggagggagtagt 20391476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 26626005 - 26626041
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26626005 tcaaaagggtcttataattagggacggagggagtagt 26626041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 32032996 - 32033031
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtag 61  Q
    ||||||||||||||||||||| ||||||||||||||    
T  32032996 tcaaaagggtcttataattagggacggagggagtag 32033031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 33413552 - 33413513
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  33413552 tcaaaagggtcttataattagggacggagggagtactatt 33413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 57
Target Start/End: Original strand, 50424857 - 50424888
Alignment:
Q  26 tcaaaagggtcttataattagagacggaggga 57  Q
    ||||||||||||||||||||||||||||||||    
T  50424857 tcaaaagggtcttataattagagacggaggga 50424888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 52978016 - 52977977
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  52978016 tcaaaagggtcttataattagggacggagggagtaatatt 52977977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 55632032 - 55631997
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagt 62  Q
    |||||||||||||||||||| |||||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagtagt 55631997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 4035859 - 4035825
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  4035859 tcaaaagggtcttataattagggacggagggagta 4035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 5375560 - 5375594
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  5375560 tcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 5743662 - 5743696
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  5743662 tcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 9328243 - 9328277
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  9328243 tcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 30771562 - 30771528
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  30771562 tcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 34273222 - 34273256
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34273222 tcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 35675923 - 35675957
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 41191631 - 41191665
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||| ||||    
T  41191631 tcaaaagggtcttataattagagacggaggtagta 41191665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 44294823 - 44294789
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  44294823 tcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 45742809 - 45742843
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  45742809 tcaaaagggtcttataattagggacggagggagta 45742843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 47806894 - 47806860
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  47806894 tcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 50352098 - 50352064
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||| ||||||||||||||||||||||||||    
T  50352098 tcaaaaggatcttataattagagacggagggagta 50352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 55632262 - 55632296
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||| ||||||||||||||||||||||||||    
T  55632262 tcaaaaggatcttataattagagacggagggagta 55632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 2615716 - 2615679
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagtat 64  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  2615716 caaaagggccttataattagggacggagggagtagtat 2615679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 20747434 - 20747467
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagta 20747467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 39144668 - 39144701
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    ||||| ||||||||||||||||||||||||||||    
T  39144668 caaaaaggtcttataattagagacggagggagta 39144701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 54
Target Start/End: Original strand, 422931 - 422959
Alignment:
Q  26 tcaaaagggtcttataattagagacggag 54  Q
    |||||||||||||||||||||||||||||    
T  422931 tcaaaagggtcttataattagagacggag 422959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 14794027 - 14794059
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||| ||||    
T  14794027 aaaagggtcttataattagagacggaggtagta 14794059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 29520167 - 29520203
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  29520167 tcaaaagggtcttataattagggacggaggtagtagt 29520203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 39670989 - 39671025
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  39670989 tcaaaagggtcttataattagggacggaggtagtagt 39671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 53277190 - 53277222
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||| |||||||||||||    
T  53277190 aaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 346
Target Start/End: Complemental strand, 10319795 - 10319669
Alignment:
Q  220 tcttctttacatattatttagctaggttttgtatgagttatttaaaaggaaatgaattgccgctattttcgataaaagaaagtggcgatatctcatttgt 319  Q
    ||||||||| ||||||||| ||||| || |||||||||||||| ||| |||| ||||||||||||||||||| ||||| | | | |||||||||||| ||    
T  10319795 tcttctttatatattatttggctagcttgtgtatgagttatttgaaaagaaaggaattgccgctattttcgacaaaaggaggagacgatatctcattggt 10319696  T
Q  320 ttgataaactaaagttgttatcatttt 346  Q
    | |||||| ||||||||||| ||||||    
T  10319695 tcgataaaataaagttgttaccatttt 10319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 10195996 - 10196031
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtag 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  10195996 tcaaaagggtcttataattagagacggagggagtag 10196031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 9388562 - 9388524
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagtatt 65  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagtagtatt 9388524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 19097804 - 19097838
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||||||||    
T  19097804 tcaaaagggtcttataattagagacggagggagta 19097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 8743222 - 8743185
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  8743222 tcaaaagggtcttataattagggacggagggagtagta 8743185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 23398142 - 23398178
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23398142 tcaaaagggtcttataattagggacggagggagtagt 23398178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 231108 - 231142
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  231108 tcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 4844434 - 4844400
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  4844434 tcaaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 9038676 - 9038642
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 11847835 - 11847869
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 30248681 - 30248647
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  30248681 tcaaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 34301835 - 34301869
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34301835 tcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 34741730 - 34741763
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagta 34741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 287417 - 287453
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    |||||| |||||||||||||| |||||||||||||||    
T  287417 tcaaaaaggtcttataattagggacggagggagtagt 287453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 12144043 - 12144075
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||| |||||||||||||    
T  12144043 aaaagggtcttataattagggacggagggagta 12144075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 31091479 - 31091443
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  31091479 tcaaaagggtcttataattagggacggaggtagtagt 31091443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 50647947 - 50647984
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50647947 tcaaaagggtcttataattagagacggagggagtagta 50647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 45252807 - 45252769
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtat 64  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  45252807 tcaaaagggtcttataattagggacggagggagtagtat 45252769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 16435010 - 16434975
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagt 62  Q
    |||||||||||||||||||| |||||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagtagt 16434975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 36005768 - 36005803
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagt 62  Q
    |||||||||||||||||||| |||||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagtagt 36005803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 51284065 - 51284104
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  51284065 tcaaaagggtcttataattagggacggagggagtattatt 51284104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 4024086 - 4024052
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  4024086 tcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 7181384 - 7181350
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  7181384 tcaaaagggtcttataattagggacggagggagta 7181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 9499500 - 9499534
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  9499500 tcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 10220967 - 10220933
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  10220967 tcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 12050395 - 12050429
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  12050395 tcaaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 14428644 - 14428610
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  14428644 tcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 16435239 - 16435273
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||| ||||||||||||||||||||||||||    
T  16435239 tcaaaaggatcttataattagagacggagggagta 16435273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 21756520 - 21756486
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  21756520 tcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 22103932 - 22103966
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  22103932 tcaaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 25149125 - 25149159
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  25149125 tcaaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 26593768 - 26593802
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  26593768 tcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 26806148 - 26806110
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagtatt 65  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  26806148 caaaagggtcttataattagggacggagggagtattatt 26806110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 35868086 - 35868120
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  35868086 tcaaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 37728747 - 37728713
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  37728747 tcaaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 43868137 - 43868103
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  43868137 tcaaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 44543816 - 44543782
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  44543816 tcaaaagggtcttataattagggacggagggagta 44543782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 46049989 - 46050023
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  46049989 tcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 50647717 - 50647679
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagtatt 65  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  50647717 caaaagggtcttataattagggacggagggagtattatt 50647679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 50726786 - 50726824
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtat 64  Q
    |||||||||||||||||| || |||||||||||||||||    
T  50726786 tcaaaagggtcttataatcagggacggagggagtagtat 50726824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 50786062 - 50786024
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtat 64  Q
    |||||||||||||||||| || |||||||||||||||||    
T  50786062 tcaaaagggtcttataatcagggacggagggagtagtat 50786024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 8321959 - 8321922
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  8321959 tcaaaagggtcttataattagggacggaggtagtagta 8321922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 14428873 - 14428906
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagta 14428906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 20862461 - 20862494
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagta 20862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 33868712 - 33868745
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagta 33868745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 53361628 - 53361591
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  53361628 tcaaaagggtcttataattagggacggatggagtagta 53361591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 54604588 - 54604625
Alignment:
Q  23 ttatcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||  |||||||||||||    
T  54604588 ttatcaaaagggtcttataattaaggacggagggagta 54604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 14758875 - 14758843
Alignment:
Q  23 ttatcaaaagggtcttataattagagacggagg 55  Q
    |||||||||||||||||||||||| ||||||||    
T  14758875 ttatcaaaagggtcttataattagggacggagg 14758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 19920597 - 19920558
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  19920597 tcaaaagggtcttataattagggacggagggagtagtatt 19920558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 18113169 - 18113203
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagggagta 18113203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 29177025 - 29176992
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||||||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagta 29176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 25247693 - 25247733
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtattg 66  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  25247693 tcaaaagagtcttataattagggacggagggagtagtattg 25247733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 33858869 - 33858908
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  33858869 tcaaaagggtcttataattagggacggagggagtattatt 33858908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 48521063 - 48521024
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  48521063 tcaaaagggtcttataattagggacggagggagtactatt 48521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 6387359 - 6387325
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||| |||||||||||||||||||||||||||    
T  6387359 tcaaaagagtcttataattagagacggagggagta 6387325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 21295185 - 21295151
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  21295185 tcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 26255130 - 26255096
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  26255130 tcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 29286040 - 29286074
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  29286040 tcaaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 29643146 - 29643180
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||| ||||||||||    
T  29643146 tcaaaagggtcttataattagagatggagggagta 29643180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 32814467 - 32814433
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  32814467 tcaaaagggtcttataattagggacggagggagta 32814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 32872378 - 32872412
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  32872378 tcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 36698134 - 36698168
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  36698134 tcaaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 38428411 - 38428449
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagtatt 65  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  38428411 caaaagggtcttataattagggacggagggagtaatatt 38428449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 38858332 - 38858298
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  38858332 tcaaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 39197752 - 39197718
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  39197752 tcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 39871616 - 39871650
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  39871616 tcaaaagggtcttataattagggacggagggagta 39871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 40300264 - 40300230
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  40300264 tcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 41026099 - 41026133
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  41026099 tcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 41252364 - 41252398
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  41252364 tcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 49045123 - 49045157
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||| ||||    
T  49045123 tcaaaagggtcttataattagagacggaggtagta 49045157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 1275733 - 1275770
Alignment:
Q  23 ttatcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||| || ||||||||||    
T  1275733 ttatcaaaagggtcttataattagggatggagggagta 1275770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 20075111 - 20075144
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagta 20075144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 28060981 - 28061014
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagta 28061014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 46075870 - 46075909
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  46075870 tcaaaagggtcttataattagggacggagggagtagtatt 46075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 14171576 - 14171542
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||||||||    
T  14171576 tcaaaagggtcttataattagagacggagggagta 14171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 23542013 - 23541977
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23542013 tcaaaagggtcttataattagggacggagggagtagt 23541977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 36694888 - 36694852
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36694888 tcaaaagggtcttataattagggacggagggagtagt 36694852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 36710989 - 36710953
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36710989 tcaaaagggtcttataattagggacggagggagtagt 36710953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 39363197 - 39363241
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtattgatca 70  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||    
T  39363197 tcaaaagggtcttataattagggacggagggagtaatagtgatca 39363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 30290299 - 30290260
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  30290299 tcaaaagggtcttataattagggacggagggagtaatatt 30290260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 44649663 - 44649624
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  44649663 tcaaaagggtcttataattagggacggagggagtaatatt 44649624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 47296550 - 47296585
Alignment:
Q  28 aaaagggtcttataattagagacggagggagtagta 63  Q
    |||||||||||||||||||||||||||| |||||||    
T  47296550 aaaagggtcttataattagagacggaggtagtagta 47296585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 943640 - 943674
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  943640 tcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 1039384 - 1039418
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  1039384 tcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 1046290 - 1046324
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  1046290 tcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 4102717 - 4102751
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  4102717 tcaaaagggtcttataattagggacggagggagta 4102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 6089769 - 6089735
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||| ||||    
T  6089769 tcaaaagggtcttataattagagacggaggtagta 6089735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 7784025 - 7783987
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtat 64  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  7784025 tcaaaagggtattataattagggacggagggagtagtat 7783987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 11741431 - 11741397
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  11741431 tcaaaagggtcttataattagggacggagggagta 11741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 15811235 - 15811269
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  15811235 tcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 37951952 - 37951986
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  37951952 tcaaaagggtcttataattagggacggagggagta 37951986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 38920273 - 38920239
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  38920273 tcaaaagggtcttataattagggacggagggagta 38920239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 39497467 - 39497433
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  39497467 tcaaaagggtcttataattagggacggagggagta 39497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 45039446 - 45039412
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  45039446 tcaaaagggtcttataattagggacggagggagta 45039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 48067898 - 48067932
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||| ||||    
T  48067898 tcaaaagggtcttataattagagacggaggtagta 48067932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 49907055 - 49907021
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  49907055 tcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 52431177 - 52431211
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  52431177 tcaaaagggtcttataattagggacggagggagta 52431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 1048025 - 1047992
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagta 1047992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 9202278 - 9202245
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagta 9202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 11907235 - 11907272
Alignment:
Q  28 aaaagggtcttataattagagacggagggagtagtatt 65  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  11907235 aaaagggtcttataattagagacggaggaagtattatt 11907272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 16576092 - 16576129
Alignment:
Q  23 ttatcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  16576092 ttatcaaaagagtcttataattagggacggagggagta 16576129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 30289865 - 30289898
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagt 59  Q
    ||||||||||||||||||||| ||||||||||||    
T  30289865 tcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 39362967 - 39362934
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagta 39362934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 39750154 - 39750121
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagta 39750121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 43456624 - 43456661
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  43456624 tcaaaagggtcttataattagggacggaggtagtagta 43456661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 4280129 - 4280165
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  4280129 tcaaaagggtcttataattagggacggaggtagtagt 4280165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 25227340 - 25227304
Alignment:
Q  24 tatcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  25227340 tatcaaaagggtcttataattagggacggaggtagta 25227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 52602023 - 52601991
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||| |||||||||||||    
T  52602023 aaaagggtcttataattagggacggagggagta 52601991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 29598258 - 29598224
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||||||||    
T  29598258 tcaaaagggtcttataattagagacggagggagta 29598224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 38878755 - 38878721
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||||||||||    
T  38878755 tcaaaagggtcttataattagagacggagggagta 38878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 43653976 - 43653939
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagtat 64  Q
    |||||||||||||||||||| |||||||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagtagtat 43653939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 18455752 - 18455717
Alignment:
Q  28 aaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18455752 aaaagggtcttataattagggacggagggagtagta 18455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 28192178 - 28192217
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagtatt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  28192178 tcaaaagggtcttataattagggacggagggagtaatatt 28192217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 42885088 - 42885053
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtag 61  Q
    ||||||||||||||||||||| ||||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagtag 42885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 51098 - 51132
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  51098 tcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 1774376 - 1774342
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  1774376 tcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 2944275 - 2944309
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  2944275 tcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 8251936 - 8251970
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  8251936 tcaaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 8951431 - 8951465
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  8951431 tcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 13153962 - 13153928
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  13153962 tcaaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 13154192 - 13154226
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtag 61  Q
    |||||||||||||||||||| ||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagtag 13154226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 17856779 - 17856813
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagta 17856813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 18754178 - 18754144
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  18754178 tcaaaagggtcttataattagggacggagggagta 18754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 26016603 - 26016569
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagta 26016569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 28572080 - 28572046
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  28572080 tcaaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 28579673 - 28579639
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  28579673 tcaaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 32675760 - 32675794
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  32675760 tcaaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 34568524 - 34568490
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34568524 tcaaaagggtcttataattagggacggagggagta 34568490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 39029212 - 39029178
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  39029212 tcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 5162338 - 5162301
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  5162338 tcaaaagggtcttataattagggacggaggtagtagta 5162301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 11798639 - 11798602
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  11798639 tcaaaagggtcttataattagggacagagggagtagta 11798602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 29279460 - 29279493
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagta 29279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 32522846 - 32522883
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  32522846 tcaaaagggtcttataattagcgacggaggtagtagta 32522883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 40530410 - 40530443
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagta 40530443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 44250892 - 44250859
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagta 44250859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 28864280 - 28864244
Alignment:
Q  27 caaaagggtcttataattagagacggagggagtagta 63  Q
    |||||||||||||||||||| || |||||||||||||    
T  28864280 caaaagggtcttataattagggatggagggagtagta 28864244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 29279233 - 29279193
Alignment:
Q  23 ttatcaaaaggg-tcttataattagagacggagggagtagt 62  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  29279233 ttatcaaaaggggtcttataattagggacggagggagtagt 29279193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 44888714 - 44888678
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  44888714 tcaaaagggtcttataattagggacggaggtagtagt 44888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 3785 - 3822
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  3785 tcaaaagggtcttataattagggacggagggagtagta 3822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 32147555 - 32147588
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||||||||||||||||    
T  32147555 caaaagggtcttataattagagacggagggagta 32147588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 13660895 - 13660859
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    |||||||| ||||||||||||||||||||||||||||    
T  13660895 tcaaaaggatcttataattagagacggagggagtagt 13660859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 1265983 - 1265949
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  1265983 tcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 6673231 - 6673265
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  6673231 tcaaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 7951596 - 7951562
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  7951596 tcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 9020728 - 9020694
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagta 9020694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 9828427 - 9828393
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  9828427 tcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 10734526 - 10734560
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 14913682 - 14913648
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  14913682 tcaaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 16127293 - 16127259
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  16127293 tcaaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 22527726 - 22527692
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  22527726 tcaaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 26894876 - 26894910
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  26894876 tcaaaagggtcttataattagggacggagggagta 26894910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 34662238 - 34662204
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34662238 tcaaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 40004412 - 40004446
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  40004412 tcaaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 186362 - 186395
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagta 186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 16440963 - 16440931
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||| |||||||||||||    
T  16440963 aaaagggtcttataattagggacggagggagta 16440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 17408297 - 17408333
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    ||||||||||||||||||||| |||||||||||||||    
T  17408297 tcaaaagggtcttataattagggacggagggagtagt 17408333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 2438259 - 2438225
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  2438259 tcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 7491878 - 7491844
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  7491878 tcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 8716895 - 8716929
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  8716895 tcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 11201717 - 11201683
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  11201717 tcaaaagggtcttataattagggacggagggagta 11201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 20252244 - 20252210
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  20252244 tcaaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 27560240 - 27560206
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  27560240 tcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 34062668 - 34062702
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34062668 tcaaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 34113789 - 34113823
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 34883851 - 34883885
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  34883851 tcaaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 36131031 - 36131065
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  36131031 tcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 40607736 - 40607702
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  40607736 tcaaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 41450550 - 41450516
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  41450550 tcaaaagggtcttataattagggacggagggagta 41450516  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 2200243 - 2200280
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  2200243 tcaaaagggtcttataattagggacggaggtagtagta 2200280  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 3095333 - 3095296
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagta 63  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  3095333 tcaaaagggtcttataattagggacggaggtagtagta 3095296  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 16108248 - 16108215
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagta 16108215  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 39833772 - 39833739
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagta 39833739  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 12873018 - 12872986
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||| ||||    
T  12873018 aaaagggtcttataattagagacggaggtagta 12872986  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 20727861 - 20727897
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    |||||||||||||||||||||||||||| | ||||||    
T  20727861 tcaaaagggtcttataattagagacggaagaagtagt 20727897  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 22182929 - 22182961
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||| |||||||||||||    
T  22182929 aaaagggtcttataattagggacggagggagta 22182961  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 24300354 - 24300386
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggag 58  Q
    |||||||||||||||||||||| ||||||||||    
T  24300354 tcaaaagggtcttataattagaaacggagggag 24300386  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggag 58  Q
    ||||||||||||||||||||| |||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 12099 - 12065
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  12099 tcaaaagggtcttataattagggacggagggagta 12065  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 51685 - 51719
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  51685 tcaaaagggtcttataattagggacggagggagta 51719  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 47674 - 47640
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  47674 tcaaaagggtcttataattagggacggagggagta 47640  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 259125 - 259159
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  259125 tcaaaagggtcttataattagggacggagggagta 259159  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 355334 - 355368
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagta 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagta 355368  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  27 caaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||| |||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 5292 - 5324
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||| ||||||||||||||    
T  5292 aaaagggtcttataattaaagacggagggagta 5324  T

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Target: scaffold0097 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 31690 - 31726
Alignment:
Q  26 tcaaaagggtcttataattagagacggagggagtagt 62  Q
    |||||||||||||||||||||||||||| | ||||||    
T  31690 tcaaaagggtcttataattagagacggaagaagtagt 31726  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 45704 - 45672
Alignment:
Q  28 aaaagggtcttataattagagacggagggagta 60  Q
    |||||||||||||||||||||||||||| ||||    
T  45704 aaaagggtcttataattagagacggaggtagta 45672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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