View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18285_high_4 (Length: 481)

Name: NF18285_high_4
Description: NF18285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18285_high_4
NF18285_high_4
[»] chr5 (43 HSPs)
chr5 (1-468)||(28857574-28858043)
chr5 (8-195)||(31986714-31986901)
chr5 (83-200)||(24771354-24771469)
chr5 (86-194)||(36253815-36253921)
chr5 (86-193)||(17510048-17510153)
chr5 (86-194)||(42019562-42019668)
chr5 (86-194)||(17504942-17505048)
chr5 (84-194)||(1414049-1414157)
chr5 (86-191)||(13582690-13582793)
chr5 (86-191)||(14374127-14374230)
chr5 (86-194)||(26709091-26709199)
chr5 (86-194)||(26978825-26978933)
chr5 (100-200)||(24776829-24776927)
chr5 (86-194)||(41858583-41858688)
chr5 (86-188)||(7805066-7805166)
chr5 (86-191)||(24435869-24435972)
chr5 (15-191)||(31731535-31731710)
chr5 (85-186)||(37248794-37248894)
chr5 (102-194)||(41853538-41853627)
chr5 (15-191)||(21323894-21324069)
chr5 (85-186)||(26667268-26667368)
chr5 (85-186)||(26938865-26938965)
chr5 (85-186)||(29167972-29168072)
chr5 (85-186)||(10759819-10759918)
chr5 (85-186)||(556691-556791)
chr5 (85-186)||(561463-561563)
chr5 (114-211)||(1430011-1430107)
chr5 (85-186)||(6514600-6514700)
chr5 (85-186)||(12103021-12103121)
chr5 (85-186)||(36423633-36423733)
chr5 (85-186)||(36428705-36428805)
chr5 (85-186)||(36937510-36937610)
chr5 (85-186)||(36942264-36942364)
chr5 (21-71)||(1429929-1429979)
chr5 (86-191)||(13301486-13301589)
chr5 (85-186)||(39518406-39518506)
chr5 (85-186)||(39523045-39523145)
chr5 (85-186)||(42001430-42001530)
chr5 (85-185)||(32461548-32461647)
chr5 (165-211)||(36949083-36949129)
chr5 (85-186)||(12045138-12045238)
chr5 (85-186)||(12501898-12501998)
chr5 (85-186)||(41996661-41996761)
[»] chr4 (46 HSPs)
chr4 (9-216)||(34644524-34644730)
chr4 (9-199)||(17359520-17359705)
chr4 (86-194)||(8980285-8980391)
chr4 (86-194)||(8985405-8985511)
chr4 (80-200)||(13695142-13695260)
chr4 (86-194)||(13700499-13700605)
chr4 (86-194)||(21299833-21299939)
chr4 (86-194)||(41393234-41393340)
chr4 (86-194)||(51019373-51019479)
chr4 (86-194)||(54991475-54991581)
chr4 (86-200)||(13710652-13710763)
chr4 (86-194)||(21304953-21305059)
chr4 (86-194)||(36359283-36359389)
chr4 (86-194)||(39999058-39999164)
chr4 (86-194)||(40004016-40004122)
chr4 (86-194)||(53797618-53797724)
chr4 (86-194)||(54343192-54343298)
chr4 (86-194)||(54348346-54348452)
chr4 (86-193)||(47046307-47046412)
chr4 (86-194)||(36354165-36354271)
chr4 (86-192)||(24490022-24490127)
chr4 (107-201)||(39319613-39319706)
chr4 (86-191)||(653035-653138)
chr4 (88-193)||(10120811-10120914)
chr4 (86-198)||(8083027-8083138)
chr4 (84-200)||(10318777-10318892)
chr4 (85-186)||(31269030-31269130)
chr4 (85-186)||(37259876-37259976)
chr4 (24-186)||(3997995-3998155)
chr4 (85-186)||(5271418-5271518)
chr4 (85-186)||(13521991-13522091)
chr4 (85-186)||(16421025-16421125)
chr4 (85-186)||(31273517-31273617)
chr4 (85-186)||(37264563-37264663)
chr4 (15-191)||(41816776-41816951)
chr4 (86-182)||(9764021-9764115)
chr4 (86-157)||(30564414-30564485)
chr4 (10-71)||(19724951-19725012)
chr4 (85-186)||(31765882-31765982)
chr4 (10-134)||(3258161-3258285)
chr4 (111-191)||(34560489-34560568)
chr4 (86-169)||(31298385-31298466)
chr4 (85-159)||(31729386-31729460)
chr4 (85-186)||(55251716-55251815)
chr4 (85-186)||(8693707-8693807)
chr4 (36-185)||(30255530-30255679)
[»] chr6 (26 HSPs)
chr6 (8-200)||(10642692-10642884)
chr6 (86-199)||(24192480-24192591)
chr6 (86-194)||(29491237-29491343)
chr6 (13-196)||(5600896-5601081)
chr6 (86-199)||(24191383-24191494)
chr6 (86-194)||(21396688-21396794)
chr6 (86-194)||(22698243-22698349)
chr6 (86-193)||(31981550-31981655)
chr6 (88-193)||(3901902-3902006)
chr6 (86-186)||(12183000-12183099)
chr6 (86-193)||(17281563-17281669)
chr6 (86-193)||(19478138-19478243)
chr6 (92-194)||(21401744-21401844)
chr6 (9-159)||(22713717-22713867)
chr6 (86-194)||(22703366-22703472)
chr6 (86-193)||(13605092-13605197)
chr6 (86-192)||(34142071-34142175)
chr6 (86-192)||(34154687-34154791)
chr6 (88-193)||(29325525-29325629)
chr6 (86-194)||(34375908-34376014)
chr6 (86-194)||(2818147-2818253)
chr6 (85-186)||(11570748-11570848)
chr6 (100-198)||(5740804-5740901)
chr6 (85-159)||(17964558-17964632)
chr6 (86-187)||(6112973-6113072)
chr6 (149-193)||(6728397-6728440)
[»] chr3 (55 HSPs)
chr3 (15-213)||(27605064-27605261)
chr3 (9-216)||(1688808-1689015)
chr3 (8-211)||(795326-795529)
chr3 (8-200)||(2617176-2617369)
chr3 (8-155)||(1741029-1741178)
chr3 (86-194)||(17368708-17368814)
chr3 (86-193)||(3476946-3477051)
chr3 (86-194)||(17364052-17364160)
chr3 (86-194)||(20090662-20090768)
chr3 (86-194)||(20095787-20095893)
chr3 (86-194)||(34129169-34129275)
chr3 (86-194)||(54270633-54270739)
chr3 (32-227)||(23071488-23071681)
chr3 (17-157)||(26706808-26706951)
chr3 (86-194)||(15763030-15763136)
chr3 (86-193)||(33089343-33089448)
chr3 (86-194)||(17357825-17357933)
chr3 (86-194)||(15768191-15768297)
chr3 (86-193)||(13022017-13022122)
chr3 (104-227)||(23074427-23074549)
chr3 (86-200)||(4117600-4117712)
chr3 (86-183)||(3482423-3482518)
chr3 (86-183)||(55128790-55128885)
chr3 (86-193)||(20810362-20810467)
chr3 (86-193)||(53119517-53119622)
chr3 (21-155)||(25023859-25023993)
chr3 (15-191)||(10586111-10586286)
chr3 (86-198)||(38436991-38437101)
chr3 (85-186)||(758367-758467)
chr3 (85-186)||(3418989-3419089)
chr3 (85-186)||(14438694-14438794)
chr3 (85-186)||(23666122-23666222)
chr3 (85-186)||(24038370-24038470)
chr3 (85-186)||(29350234-29350334)
chr3 (85-186)||(39775727-39775827)
chr3 (22-197)||(1689896-1690069)
chr3 (86-194)||(30341844-30341950)
chr3 (23-191)||(31002689-31002854)
chr3 (86-193)||(21494302-21494408)
chr3 (86-193)||(26962049-26962154)
chr3 (85-186)||(3672580-3672680)
chr3 (85-186)||(3692612-3692712)
chr3 (105-194)||(10321431-10321518)
chr3 (85-186)||(18467219-18467319)
chr3 (85-186)||(20520048-20520148)
chr3 (124-201)||(6024101-6024177)
chr3 (85-186)||(7571217-7571317)
chr3 (86-191)||(45904449-45904552)
chr3 (85-186)||(49971423-49971523)
chr3 (136-184)||(25726843-25726890)
chr3 (85-186)||(3033638-3033738)
chr3 (85-182)||(8883168-8883264)
chr3 (85-186)||(18472002-18472101)
chr3 (147-200)||(53358225-53358277)
chr3 (83-191)||(45904902-45905008)
[»] chr2 (32 HSPs)
chr2 (15-210)||(39542874-39543068)
chr2 (8-160)||(28945190-28945343)
chr2 (9-211)||(11658811-11659012)
chr2 (15-199)||(39542434-39542617)
chr2 (86-194)||(28751729-28751835)
chr2 (86-194)||(42723451-42723557)
chr2 (86-194)||(42728620-42728726)
chr2 (86-194)||(44096291-44096397)
chr2 (86-194)||(44754596-44754702)
chr2 (86-194)||(44759762-44759868)
chr2 (86-194)||(40518472-40518578)
chr2 (86-193)||(42914632-42914737)
chr2 (15-191)||(19538377-19538552)
chr2 (23-191)||(6297823-6297989)
chr2 (81-193)||(5089268-5089378)
chr2 (85-186)||(10160723-10160823)
chr2 (86-159)||(40392342-40392414)
chr2 (85-185)||(30658260-30658359)
chr2 (109-191)||(28854996-28855077)
chr2 (85-186)||(1934992-1935092)
chr2 (122-210)||(22844791-22844878)
chr2 (138-234)||(29907416-29907510)
chr2 (86-133)||(17327455-17327502)
chr2 (8-105)||(27556640-27556738)
chr2 (85-186)||(25497324-25497424)
chr2 (85-186)||(30650925-30651025)
chr2 (85-184)||(18344429-18344527)
chr2 (88-186)||(29677377-29677474)
chr2 (85-186)||(7737850-7737950)
chr2 (85-186)||(19578413-19578513)
chr2 (85-186)||(25478296-25478396)
chr2 (110-159)||(44683173-44683222)
[»] scaffold0014 (2 HSPs)
scaffold0014 (86-194)||(31534-31640)
scaffold0014 (86-194)||(26362-26468)
[»] chr7 (37 HSPs)
chr7 (86-194)||(16539412-16539518)
chr7 (86-194)||(16626144-16626250)
chr7 (86-194)||(42571934-42572040)
chr7 (86-193)||(47177119-47177224)
chr7 (83-193)||(9973452-9973560)
chr7 (86-194)||(12934387-12934492)
chr7 (86-194)||(33237991-33238097)
chr7 (86-194)||(47998964-47999070)
chr7 (21-191)||(19640290-19640458)
chr7 (86-194)||(21081039-21081147)
chr7 (86-194)||(2234630-2234736)
chr7 (86-194)||(17495392-17495498)
chr7 (86-194)||(17557716-17557822)
chr7 (86-194)||(32212654-32212760)
chr7 (86-194)||(33243168-33243274)
chr7 (86-194)||(47993789-47993895)
chr7 (86-193)||(43892848-43892953)
chr7 (10-235)||(7875017-7875247)
chr7 (89-193)||(28292506-28292607)
chr7 (86-193)||(24528344-24528449)
chr7 (15-191)||(27256234-27256409)
chr7 (86-194)||(19309611-19309716)
chr7 (86-181)||(33226416-33226509)
chr7 (116-194)||(22857717-22857793)
chr7 (17-159)||(24169968-24170110)
chr7 (85-186)||(4579504-4579604)
chr7 (85-192)||(8076040-8076146)
chr7 (85-186)||(9650966-9651066)
chr7 (85-186)||(26341195-26341295)
chr7 (85-185)||(23866065-23866164)
chr7 (85-192)||(12254069-12254175)
chr7 (85-184)||(23246932-23247030)
chr7 (136-186)||(16372394-16372443)
chr7 (85-186)||(13314235-13314335)
chr7 (178-211)||(19640225-19640258)
chr7 (15-60)||(20932642-20932687)
chr7 (15-51)||(19687172-19687208)
[»] chr1 (32 HSPs)
chr1 (86-194)||(11251113-11251219)
chr1 (86-194)||(34318224-34318330)
chr1 (86-194)||(37404416-37404522)
chr1 (83-191)||(10106095-10106201)
chr1 (86-194)||(36684715-36684821)
chr1 (86-194)||(37409537-37409643)
chr1 (15-191)||(33055030-33055205)
chr1 (86-194)||(3584590-3584696)
chr1 (84-216)||(25188270-25188401)
chr1 (86-194)||(27716432-27716538)
chr1 (86-193)||(38734265-38734370)
chr1 (86-183)||(5724979-5725074)
chr1 (86-194)||(5730094-5730200)
chr1 (102-194)||(11387846-11387936)
chr1 (86-191)||(13890805-13890908)
chr1 (86-193)||(5602425-5602530)
chr1 (85-186)||(10135452-10135552)
chr1 (15-191)||(41097880-41098055)
chr1 (86-159)||(48246683-48246755)
chr1 (9-211)||(14724219-14724422)
chr1 (15-186)||(4632855-4633025)
chr1 (15-188)||(8267758-8267931)
chr1 (86-193)||(26651166-26651271)
chr1 (86-193)||(39747165-39747270)
chr1 (86-193)||(14582089-14582194)
chr1 (102-168)||(27711319-27711383)
chr1 (85-186)||(40165976-40166076)
chr1 (85-186)||(18784548-18784647)
chr1 (85-186)||(23192816-23192916)
chr1 (85-185)||(51041462-51041559)
chr1 (85-186)||(19799012-19799112)
chr1 (85-186)||(47451224-47451324)
[»] scaffold0166 (2 HSPs)
scaffold0166 (86-193)||(13740-13845)
scaffold0166 (100-200)||(19212-19310)
[»] scaffold0067 (1 HSPs)
scaffold0067 (34-193)||(33917-34074)
[»] scaffold0594 (1 HSPs)
scaffold0594 (86-194)||(9208-9314)
[»] scaffold0517 (1 HSPs)
scaffold0517 (86-194)||(3552-3658)
[»] scaffold0055 (1 HSPs)
scaffold0055 (86-194)||(3047-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (86-194)||(81382-81488)
[»] chr8 (31 HSPs)
chr8 (86-194)||(17955789-17955895)
chr8 (86-194)||(21644081-21644187)
chr8 (86-194)||(42514374-42514480)
chr8 (86-194)||(32015689-32015795)
chr8 (86-193)||(19430004-19430109)
chr8 (86-193)||(19435506-19435611)
chr8 (86-193)||(19566153-19566258)
chr8 (86-193)||(19571655-19571760)
chr8 (86-193)||(33616727-33616832)
chr8 (88-194)||(24884701-24884805)
chr8 (86-194)||(43999230-43999336)
chr8 (86-193)||(31030518-31030623)
chr8 (86-193)||(13584340-13584453)
chr8 (83-211)||(33847991-33848117)
chr8 (64-187)||(37771707-37771828)
chr8 (85-186)||(18876366-18876465)
chr8 (85-186)||(19166630-19166730)
chr8 (85-186)||(31449865-31449965)
chr8 (133-194)||(32010527-32010587)
chr8 (15-187)||(34818627-34818798)
chr8 (85-186)||(38182236-38182336)
chr8 (85-186)||(44925922-44926022)
chr8 (85-186)||(40125884-40125984)
chr8 (85-184)||(15875667-15875765)
chr8 (86-188)||(25367993-25368093)
chr8 (85-186)||(17025931-17026031)
chr8 (85-186)||(17556423-17556523)
chr8 (85-186)||(17953872-17953972)
chr8 (85-186)||(33416543-33416643)
chr8 (85-186)||(34118462-34118562)
chr8 (85-130)||(43302717-43302762)
[»] scaffold0060 (1 HSPs)
scaffold0060 (86-194)||(36999-37105)
[»] scaffold0027 (1 HSPs)
scaffold0027 (9-211)||(43070-43277)
[»] scaffold0011 (2 HSPs)
scaffold0011 (86-198)||(1550-1660)
scaffold0011 (86-193)||(7036-7141)
[»] scaffold0132 (2 HSPs)
scaffold0132 (86-193)||(2772-2877)
scaffold0132 (86-193)||(10732-10837)
[»] scaffold0352 (1 HSPs)
scaffold0352 (85-186)||(7100-7200)
[»] scaffold0182 (1 HSPs)
scaffold0182 (85-186)||(9886-9986)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-187)||(1154-1325)
[»] scaffold0061 (1 HSPs)
scaffold0061 (21-191)||(45776-45944)
[»] scaffold0017 (1 HSPs)
scaffold0017 (21-191)||(152843-153011)
[»] scaffold0002 (1 HSPs)
scaffold0002 (85-186)||(4070-4170)
[»] scaffold0045 (1 HSPs)
scaffold0045 (85-186)||(83062-83162)
[»] scaffold0012 (1 HSPs)
scaffold0012 (85-186)||(166085-166185)


Alignment Details
Target: chr5 (Bit Score: 411; Significance: 0; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 1 - 468
Target Start/End: Complemental strand, 28858043 - 28857574
Alignment:
Q  1 ttaagtctgattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28858043 ttaagtctgattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtag 28857944  T
Q  101 gcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28857943 gcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 28857844  T
Q  201 gaggtgatttctttttcaaaatggtacgtttctagtaaaaactcacacatatgcggatgagttgatattcgaatctcaatcacgatatccaaccaa--nn 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        
T  28857843 gaggtgatttctttttcaaaatggtacgtttctagtaaaaactcacacatatgcggatgagttgatattcgaatctcaatcacgatatccgaccaatttt 28857744  T
Q  299 nnnnnnnnnnacatttttatcggttgagttaagatttttgacggacttatcacacaaatgaagaagccaagaaggtgcttggtccaataccgtgacaaac 398  Q
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28857743 ttttttttttacatttttatcggttgagttaagatttttgacggacttatcacacaaatgaagaagccaagaaggtgcttggtccaataccgtgacaaac 28857644  T
Q  399 actattttgtttctctattcattcatccactcaggtctcaatcaactctcagcaaccatatgtcacaggt 468  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28857643 actattttgtttctctattcattcatccactcaagtctcaatcaactctcagcaaccatatgtcacaggt 28857574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 31986901 - 31986714
Alignment:
Q  8 tgattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 106  Q
    ||||||||||||||  |||| |||||||||||||  ||||||||| | |||||| |||||||||| |  | |||||||||||||||||||| ||||||||    
T  31986901 tgattaaaccatatcagaggatgttatttctcgatcgattacttacggtgcagtacgtaatcgaacaagtgaactaggttgttttatcctgaaggcggcg 31986802  T
Q  107 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatat 195  Q
    |  |||||  ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||| |  ||||||||||||||| ||||||    
T  31986801 caattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtctt-aaagaaagcgaccttatcgtgactcaacccgataatat 31986714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 24771354 - 24771469
Alignment:
Q  83 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  24771354 ggttgttttatcctggagacggcgcggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacatctt-aaagaaagcgacctggtcgtgactc 24771451  T
Q  183 aacccggtaatatcttcg 200  Q
    | ||||||||||| ||||    
T  24771452 atcccggtaatattttcg 24771469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 36253921 - 36253815
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| |||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 36253824  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  36253823 ccggtaata 36253815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 17510153 - 17510048
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 17510056  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  17510055 ccggtaat 17510048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 42019668 - 42019562
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || |||| |||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  42019668 tgttttatcctggagacggcacggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 42019571  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  42019570 ccggtaata 42019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 17505048 - 17504942
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || || |||||||| | ||||||||||||||| || |||||||||||||||||||||| ||||||| |||| ||||||||||||| |    
T  17505048 tgttttatcctggagacgacgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtctt-aaagaaaacgacctggtcgtgactcacc 17504951  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  17504950 ccggtaata 17504942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 1414049 - 1414157
Alignment:
Q  84 gttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 183  Q
    ||||||||||| || || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| || ||||||||||    
T  1414049 gttgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctgatcgtgactca 1414146  T
Q  184 acccggtaata 194  Q
     ||| ||||||    
T  1414147 ccccagtaata 1414157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 13582690 - 13582793
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||| |  ||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 13582787  T
Q  186 ccggta 191  Q
    ||||||    
T  13582788 ccggta 13582793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 14374230 - 14374127
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||| ||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 14374133  T
Q  186 ccggta 191  Q
    ||||||    
T  14374132 ccggta 14374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 26709199 - 26709091
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||| ||  | |||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  26709199 tgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 26709101  T
Q  185 cccggtaata 194  Q
    ||||||||||    
T  26709100 cccggtaata 26709091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 26978933 - 26978825
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||| ||  | |||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  26978933 tgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 26978835  T
Q  185 cccggtaata 194  Q
    ||||||||||    
T  26978834 cccggtaata 26978825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 24776829 - 24776927
Alignment:
Q  100 ggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 199  Q
    |||| |||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||| |||    
T  24776829 ggcgccgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacatggtcgtgactcaccccagtaatattttc 24776926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 41858688 - 41858583
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| ||||||||||| |||||||||| |||||||||||| || ||||||||| ||    
T  41858688 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgtgaaacgtctt-aaagaaagcgacctgatcgtgactc-ac 41858592  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  41858591 ccggtaata 41858583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 7805166 - 7805066
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| || ||| |||||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagggacctggtcgtgactcaac 7805069  T
Q  186 ccg 188  Q
    |||    
T  7805068 ccg 7805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 24435869 - 24435972
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||| | ||||||||||||| ||||  | ||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcac-aacttggatagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 24435966  T
Q  186 ccggta 191  Q
    ||||||    
T  24435967 ccggta 24435972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 31731710 - 31731535
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  31731710 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 31731612  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | |||||||||||||||  || |||||||||  ||   |||||||| ||||||||| |||||||||||||||||||||    
T  31731611 tagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 31731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 37248794 - 37248894
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  | |||||||||| ||||| ||||| ||||| |||||| ||||||||||||||    
T  37248794 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtctt-aaagagagcgacctggtcgtgactcaa 37248892  T
Q  185 cc 186  Q
    ||    
T  37248893 cc 37248894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 41853627 - 41853538
Alignment:
Q  102 cggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 194  Q
    ||||||||||| | |||||| |||||||| || |||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  41853627 cggcgcggttgctagtctactttgcacaa-cttaggtagtgtcgcgaaacgtcttaaa-gaaagcgacctggtcgtgactc-acccggtaata 41853538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 21323894 - 21324069
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  21323894 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 21323992  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | |||||||||||||||  || | |||||||| ||   |||||||| ||||||||| ||||| |||||||||||||||    
T  21323993 tagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaa-gaaagcgacctggtcatgactcaacccggta 21324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 26667368 - 26667268
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  26667368 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 26667270  T
Q  185 cc 186  Q
    ||    
T  26667269 cc 26667268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 26938965 - 26938865
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  26938965 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 26938867  T
Q  185 cc 186  Q
    ||    
T  26938866 cc 26938865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 29167972 - 29168072
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  29167972 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 29168070  T
Q  185 cc 186  Q
    ||    
T  29168071 cc 29168072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 10759819 - 10759918
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| | ||||||||||||||  |||||| ||||||||||||||    
T  10759819 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaaag--agcgacctggtcgtgactcaa 10759916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 556791 - 556691
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| | ||||||||| ||||| |||||| ||||||||||||||    
T  556791 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtctt-aaagagagcgacctggtcgtgactcaa 556693  T
Q  185 cc 186  Q
    ||    
T  556692 cc 556691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 561563 - 561463
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| | ||||||||| ||||| |||||| ||||||||||||||    
T  561563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtctt-aaagagagcgacctggtcgtgactcaa 561465  T
Q  185 cc 186  Q
    ||    
T  561464 cc 561463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 1430011 - 1430107
Alignment:
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttc 211  Q
    ||||||||||||||||||||| | || || || |||||||||| ||||||| |||| | ||||| ||||||||  ||||||||||| | |||||||||    
T  1430011 tggtctaccttgcacaaactcggatattgtcgtgaaacgtctt-aaagaaaacgacatagtcgtaactcaaccaagtaatatcttcagtggtgatttc 1430107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 6514600 - 6514700
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||| ||  |  || |||||| ||||||||||| ||||| || ||||||||||||||||||    
T  6514600 ttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtctt-aaagagagtgacttggtcgtgactcaa 6514698  T
Q  185 cc 186  Q
    ||    
T  6514699 cc 6514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 12103121 - 12103021
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||| ||||||    
T  12103121 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtaactcaa 12103023  T
Q  185 cc 186  Q
    ||    
T  12103022 cc 12103021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 36423733 - 36423633
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||| ||| |||||||| ||||| | |||| ||||||||||  |  || |||||||||||||||||| ||||| |||||| |||||| |||||||    
T  36423733 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtctt-aaagagagcgacctggtcgcgactcaa 36423635  T
Q  185 cc 186  Q
    ||    
T  36423634 cc 36423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 36428805 - 36428705
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||| |||| ||||||||| ||||| |||||| ||||||||||||||    
T  36428805 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtctt-aaagagagcgacctggtcgtgactcaa 36428707  T
Q  185 cc 186  Q
    ||    
T  36428706 cc 36428705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 36937510 - 36937610
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  36937510 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 36937608  T
Q  185 cc 186  Q
    ||    
T  36937609 cc 36937610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 36942264 - 36942364
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  36942264 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 36942362  T
Q  185 cc 186  Q
    ||    
T  36942363 cc 36942364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 1429929 - 1429979
Alignment:
Q  21 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaa 71  Q
    ||||||||||||||||||||||||||| ||||| |||| | ||||||||||    
T  1429929 ttgagggtgttatttctcgaatgattatttatggtgcattacgtaatcgaa 1429979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 13301486 - 13301589
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||||  | |||||||| |||||||||||||||  |  |||||||||| ||   |||||||| ||||||||| |||||||||||||||    
T  13301486 tgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaac 13301583  T
Q  186 ccggta 191  Q
    | ||||    
T  13301584 ctggta 13301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 39518506 - 39518406
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| || |||||||  |  ||  ||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  39518506 ttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 39518408  T
Q  185 cc 186  Q
    ||    
T  39518407 cc 39518406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 39523145 - 39523045
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  ||  ||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  39523145 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 39523047  T
Q  185 cc 186  Q
    ||    
T  39523046 cc 39523045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 42001530 - 42001430
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  ||| |||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  42001530 ttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 42001432  T
Q  185 cc 186  Q
    ||    
T  42001431 cc 42001430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 32461548 - 32461647
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| | ||||||||| ||||| |||||| ||||||||||||||    
T  32461548 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtctt-aaagagagcgacctggtcgtgactcaa 32461646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 36949129 - 36949083
Alignment:
Q  165 gcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttc 211  Q
    ||||| |||||||||||||| ||| |||||||||||| |||||||||    
T  36949129 gcgacctggtcgtgactcaatccgataatatcttcggtggtgatttc 36949083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 12045138 - 12045238
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||| | | ||||  |||||||||  |  || |||||| ||||||||||| |||||  ||||| ||||||||||||||    
T  12045138 ttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagggcgacctggtcgtgactcaa 12045236  T
Q  185 cc 186  Q
    ||    
T  12045237 cc 12045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 12501898 - 12501998
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||   ||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||| ||||||||    
T  12501898 ttgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcatgactcaa 12501996  T
Q  185 cc 186  Q
    ||    
T  12501997 cc 12501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 41996761 - 41996661
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  ||| |||||  |  || |||||| ||||||||||| ||||| ||| || ||||||||||||||    
T  41996761 ttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtctt-aaagagagcaacctggtcgtgactcaa 41996663  T
Q  185 cc 186  Q
    ||    
T  41996662 cc 41996661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 34644730 - 34644524
Alignment:
Q  9 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 108  Q
    ||||||||||||||||||||||||||||||||| | ||||||| | |||||| |||||||||| || | | ||  | |||||||||||||||||||||||    
T  34644730 gattaaaccatattgagggtgttatttctcgaacggttacttacggtgcagtacgtaatcgaacaggtgagctgagctgttttatcctgtaggcggcgcg 34644631  T
Q  109 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgat 208  Q
    |||||| || |||||| ||||||||| | ||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||||||||| ||| ||    
T  34644630 gttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtctt-aaagaaagcgacatgatcgtgactcaacccggtaatatcttcggtggtaat 34644532  T
Q  209 ttcttttt 216  Q
    ||||||||    
T  34644531 ttcttttt 34644524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 17359705 - 17359520
Alignment:
Q  9 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 107  Q
    |||||||||||||| || |||||| |||||||||||||||| || | |||| | |||||||||| || | |||| |||||||| |||||| ||| |||||    
T  17359705 gattaaaccatatttgaaggtgttgtttctcgaatgattacatacggtgcaatacgtaatcgaacaggtgaactgggttgtttaatcctggaggtggcgc 17359606  T
Q  108 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 199  Q
     |||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||||||     ||||||||||||||||||||||||||    
T  17359605 agttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtctt-aaagaaagcga-----tcgtgactcaacccggtaatatcttc 17359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 8980285 - 8980391
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 8980382  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  8980383 ccggtaata 8980391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 8985405 - 8985511
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 8985502  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  8985503 ccggtaata 8985511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 13695260 - 13695142
Alignment:
Q  80 ctaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtga 179  Q
    ||||| |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||| ||||||| ||||||||| |||||||||    
T  13695260 ctaggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacatcttaaa-gaaagcgacctggtcgtga 13695163  T
Q  180 ctcaacccggtaatatcttcg 200  Q
    |||| ||||||||||| ||||    
T  13695162 ctcaccccggtaatattttcg 13695142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 13700605 - 13700499
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 13700508  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  13700507 ccggtaata 13700499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 21299833 - 21299939
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 21299930  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  21299931 ccggtaata 21299939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 41393340 - 41393234
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 41393243  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  41393242 ccggtaata 41393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 51019373 - 51019479
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 51019470  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  51019471 ccggtaata 51019479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 54991581 - 54991475
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 54991484  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  54991483 ccggtaata 54991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 13710763 - 13710652
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  13710763 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgac-tggtcgtgactcacc 13710667  T
Q  186 ccggtaatatcttcg 200  Q
    |||||||||| ||||    
T  13710666 ccggtaatattttcg 13710652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 21304953 - 21305059
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||| ||||| |||||||||||| ||||||||||||| |    
T  21304953 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaaagtctt-aaagaaagcgacctggtcgtgactcacc 21305050  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  21305051 ccggtaata 21305059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 36359389 - 36359283
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 36359292  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  36359291 ccggtaata 36359283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 39999164 - 39999058
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 39999067  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  39999066 ccggtaata 39999058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 40004122 - 40004016
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 40004025  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  40004024 ccggtaata 40004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 53797724 - 53797618
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | |||||||||||||||  | ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 53797627  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  53797626 ccggtaata 53797618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 54343298 - 54343192
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    ||||||||||||||| ||||||||||| | ||||||||||||| || || ||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  54343298 tgttttatcctgtagacggcgcggttgctagtctaccttgcac-aattcgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 54343201  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  54343200 ccggtaata 54343192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 54348452 - 54348346
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 54348355  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  54348354 ccggtaata 54348346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 47046307 - 47046412
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||| |||| ||||||||||||| |    
T  47046307 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaaacgacctggtcgtgactcacc 47046404  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  47046405 ccggtaat 47046412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 36354271 - 36354165
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 36354174  T
Q  186 ccggtaata 194  Q
    ||| |||||    
T  36354173 ccgataata 36354165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 24490127 - 24490022
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||||    ||||| ||||||||||||| ||||| |||||  |||||||||||||||    
T  24490127 tgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtctt-aaagagagcgatctggtcgtgactcaac 24490029  T
Q  186 ccggtaa 192  Q
    |||||||    
T  24490028 ccggtaa 24490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 39319706 - 39319613
Alignment:
Q  107 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcgg 201  Q
    |||||||| |||||||||||||||||||  |||||| || |||||||||| |||||||||||| || |||||||||||||||||||| |||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtctt-aaagaaagcgacctgatcgtgactcaacccggtaatctcttcgg 39319613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 653138 - 653035
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||| |  ||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 653041  T
Q  186 ccggta 191  Q
    ||||||    
T  653040 ccggta 653035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 10120811 - 10120914
Alignment:
Q  88 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 187  Q
    |||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| || |||||||||||||     
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctgatcgtgactcaacct 10120908  T
Q  188 ggtaat 193  Q
    ||||||    
T  10120909 ggtaat 10120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 8083027 - 8083138
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    ||||||||| || |||||||||||||||| ||||||||||||| ||||  | |||||||| |||||||||| ||||| |||||| || |||||||| |||    
T  8083027 tgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtctt-aaagagagcgacctgatcgtgacttaac 8083125  T
Q  186 ccggtaatatctt 198  Q
     ||||||| ||||    
T  8083126 tcggtaatttctt 8083138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 10318777 - 10318892
Alignment:
Q  84 gttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 183  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||||  | ||    ||||||| ||||| ||||| |||||| |||||||||||||    
T  10318777 gttgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtctt-aaagagagcgacatggtcgtgactca 10318875  T
Q  184 acccggtaatatcttcg 200  Q
    |||||||||| ||||||    
T  10318876 acccggtaatttcttcg 10318892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 31269130 - 31269030
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  | ||| |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  31269130 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 31269032  T
Q  185 cc 186  Q
    ||    
T  31269031 cc 31269030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 37259876 - 37259976
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |   |||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  37259876 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtctt-aaagaaagcgacctggtcgtgactcaa 37259974  T
Q  185 cc 186  Q
    ||    
T  37259975 cc 37259976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 3997995 - 3998155
Alignment:
Q  24 agggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctacct 123  Q
    |||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| ||||||||||||||| ||||  | |||||||| |||||| |    
T  3997995 agggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggttgttttatcctggaggc-acacggttgttagtctactt 3998093  T
Q  124 tgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 186  Q
    |||||||  || |||||||||| ||    |||| |||||||||||| ||||||||||||||||    
T  3998094 tgcacaatttcgggtagtgccgtgatttatctt-aaagaaagcgacctggtcgtgactcaacc 3998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 5271418 - 5271518
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  5271418 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 5271516  T
Q  185 cc 186  Q
    ||    
T  5271517 cc 5271518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 13521991 - 13522091
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  13521991 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 13522089  T
Q  185 cc 186  Q
    ||    
T  13522090 cc 13522091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 16421125 - 16421025
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||||||||||||| ||||| | |||| ||||||||||  |  || |||||| ||||| ||||| || || |||||| ||||||||||||||    
T  16421125 ttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctt-aatgagagcgacctggtcgtgactcaa 16421027  T
Q  185 cc 186  Q
    ||    
T  16421026 cc 16421025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 31273617 - 31273517
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  31273617 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 31273519  T
Q  185 cc 186  Q
    ||    
T  31273518 cc 31273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 37264563 - 37264663
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||| ||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  37264563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 37264661  T
Q  185 cc 186  Q
    ||    
T  37264662 cc 37264663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 41816951 - 41816776
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||||| ||||| ||||||   |||||||| || |||| | |  |||||||||||  ||||  | |||||||    
T  41816951 accatattagagggtgttatttctcgaacgattatttatggtgcagtatctaatcgaacaggtaaattggactgttttatcctagaggc-tcacggttgt 41816853  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | | |||||||||||||  || |||||||||| |    ||||| ||||||||| || || ||||||||||||||||||    
T  41816852 tagcctaccttgcacaatttcgggtagtgccgtggtttgtctt-aaagaaagcaacctgatcgtgactcaacccggta 41816776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 9764021 - 9764115
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    |||||||||||  || ||| ||||||||| ||||||||||||| |||| |||||||||| |||||| |||| |||| | ||||| ||||||||||||    
T  9764021 tgttttatcctagagacggtgcggttgttagtctaccttgcac-aacttaggtagtgccacgaaacatctt-aaagtaggcgacctggtcgtgactc 9764115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 30564414 - 30564485
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtctta 157  Q
    |||||||||||  ||||||| |  ||||| |||||||||||||||| |  ||||||||||||||||||||||    
T  30564414 tgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtctta 30564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 19725012 - 19724951
Alignment:
Q  10 attaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaa 71  Q
    ||||||||||||| | |||||||||||||||| |||||| || | |||||| ||||||||||    
T  19725012 attaaaccatattaaaggtgttatttctcgaacgattacatacggtgcagtacgtaatcgaa 19724951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 31765982 - 31765882
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| || ||| |||| |||||||||    
T  31765982 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagtgacctggttgtgactcaa 31765884  T
Q  185 cc 186  Q
    ||    
T  31765883 cc 31765882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 3258285 - 3258161
Alignment:
Q  10 attaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcgg 109  Q
    ||||||||||||||| ||||||||||||||||  |||||||| | |  | | | |||||| | || | ||||  ||||||||||| |  |||| || |||    
T  3258285 attaaaccatattgatggtgttatttctcgaacaattacttacggtataatacataatcgtacaggtgaactgagttgttttatcttagaggcagcacgg 3258186  T
Q  110 ttgttggtctaccttgcacaaactc 134  Q
    ||||| ||||||| |||||||||||    
T  3258185 ttgttagtctaccatgcacaaactc 3258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 34560568 - 34560489
Alignment:
Q  111 tgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    |||| |||||||||||| ||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  34560568 tgttagtctaccttgcataatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 34560489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 31298385 - 31298466
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgac 169  Q
    |||||||||||| ||||| | | |||||| |||||||||||||||||||  |||||| |  |||||||||| ||||||||||||    
T  31298385 tgttttatcctggaggcg-cacagttgttagtctaccttgcacaaactcgagtagtgtcatgaaacgtctt-aaagaaagcgac 31298466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 31729386 - 31729460
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
    ||||||||||||| |||||||| | ||| | |||| ||||||||||  |  ||||||||| ||||||||||||||    
T  31729386 ttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaa 31729460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 55251815 - 55251716
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| ||| |||| ||||| | ||||  |||||||||  |  |  |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  55251815 ttgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaaag--agcgacctggtcgtgactcaa 55251718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 8693807 - 8693707
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||  |||||||| ||||| | || |  |||||||||  |  ||||| ||| |||||||||||||| || |||||| ||||||||||||||    
T  8693807 ttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 8693709  T
Q  185 cc 186  Q
    ||    
T  8693708 cc 8693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 30255530 - 30255679
Alignment:
Q  36 ctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactca 135  Q
    |||||| ||||||||| | |||||| | ||||||||  | | ||||  |||||||||  ||| || |||||| |||||| |||| | |||||||||||      
T  30255530 ctcgaacgattacttacggtgcagtacttaatcgaactggtgaactgtgttgttttagtctgaagacggcgcagttgttagtcttctttgcacaaacttg 30255629  T
Q  136 ggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
     |||||| | |||||||| ||||||||| ||||  ||  |||||||||||    
T  30255630 agtagtgtcacgaaacgttttaaaagaatgcgatatgaccgtgactcaac 30255679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 10642884 - 10642692
Alignment:
Q  8 tgattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 106  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| | |||||| |||||||||| |  | |||| || |||||||||| | ||||||||    
T  10642884 tgattaaaccatatttgagggtgttatttctggaacgattacttacggtgcagtacgtaatcgaacaagtgaactgggatgttttatccgggaggcggcg 10642785  T
Q  107 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 200  Q
    |||||||| ||||||||||||||| ||| | ||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  10642784 cggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtctt-aaagaaagcgacattgtcgtgactcaacccggtaatatcttcg 10642692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 24192480 - 24192591
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  24192480 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 24192577  T
Q  186 ccggtaatatcttc 199  Q
    ||||||||| ||||    
T  24192578 ccggtaatagcttc 24192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 29491237 - 29491343
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  29491237 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacttggtcgtgactcacc 29491334  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  29491335 ccggtaata 29491343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 5600896 - 5601081
Alignment:
Q  13 aaaccatatt-gagggtgttatttctcgaatgattacttatgttgc--agtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcgg 109  Q
    |||||||||| ||||||||||||||||||| ||||| ||| | |||  ||| |||||||||| |  | || | |  ||||||||| || |||||||||||    
T  5600896 aaaccatatttgagggtgttatttctcgaacgattagttacggtgcgcagtacgtaatcgaacatgtgaattggactgttttatcttggaggcggcgcgg 5600995  T
Q  110 ttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatc 196  Q
    |||||  |||||||| ||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||| | |||||||    
T  5600996 ttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtctt-aaagaaagcgacctggtcgtgactcaacctgataatatc 5601081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 24191383 - 24191494
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||  | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  24191383 tgttttatcctggagacggcgcggttactagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 24191480  T
Q  186 ccggtaatatcttc 199  Q
    ||||||||| ||||    
T  24191481 ccggtaatagcttc 24191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 21396794 - 21396688
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||  |||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  21396794 tgttttatcctggagatggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 21396697  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  21396696 ccggtaata 21396688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 22698243 - 22698349
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 22698340  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  22698341 ccggtaata 22698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 31981655 - 31981550
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 31981558  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  31981557 ccggtaat 31981550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 3902006 - 3901902
Alignment:
Q  88 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 187  Q
    |||||||||| |||||||||||||| |  |||||||||||||||||  | ||||||||| ||||||||| ||||| |||||| |||||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtctt-aaagagagcgacctggtcgtgactcaaccc 3901908  T
Q  188 ggtaat 193  Q
    ||||||    
T  3901907 ggtaat 3901902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 12183000 - 12183099
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||| ||| ||||| |||||||||| |||||| |||||||||||  ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaac 12183098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 17281563 - 17281669
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  |||||  ||||||||| ||||||||| ||||||  | ||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  17281563 tgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtctt-aaagaaagcgacatgctcgtgactcaac 17281661  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  17281662 ccggtaat 17281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 19478243 - 19478138
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    ||||||||| || || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19478243 tgttttatcgtggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19478146  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  19478145 ccggtaat 19478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 21401844 - 21401744
Alignment:
Q  92 atcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    |||||| || ||||||||||| | ||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcatcccggta 21401747  T
Q  192 ata 194  Q
    |||    
T  21401746 ata 21401744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 22713867 - 22713717
Alignment:
Q  9 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 108  Q
    |||||||||||||||||| |||||||| ||||| ||||||||| | |||| | |||||| ||| |  | ||||  | | |||||||||| ||| ||||||    
T  22713867 gattaaaccatattgaggatgttatttttcgaacgattacttacggtgcaatacgtaattgaacaagtgaactgagctattttatcctgaaggtggcgcg 22713768  T
Q  109 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
    |||||| ||||| |||||||||||||  ||||||| || ||||||||||||    
T  22713767 gttgttagtctatcttgcacaaactcgagtagtgctgcaaaacgtcttaaa 22713717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 22703366 - 22703472
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||| |||| |  |||||||||| |    
T  22703366 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaaacgacataatcgtgactcacc 22703463  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  22703464 ccggtaata 22703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 13605092 - 13605197
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| ||| || | |||||||||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcaacctagtcgtgactcaac 13605189  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  13605190 ccggtaat 13605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 34142175 - 34142071
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| ||||  ||||| ||| ||||||||||| |||||||||||| ||||||||||||| |    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 34142078  T
Q  186 ccggtaa 192  Q
    |||||||    
T  34142077 ccggtaa 34142071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 34154791 - 34154687
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| ||||  ||||| ||| ||||||||||| |||||||||||| ||||||||||||| |    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 34154694  T
Q  186 ccggtaa 192  Q
    |||||||    
T  34154693 ccggtaa 34154687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 29325629 - 29325525
Alignment:
Q  88 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 187  Q
    ||||||| || ||||| | | |||||| |||||||||||||||||| |||||||| ||  ||||||||||||| | ||||||||| ||||||||||||||    
T  29325629 ttttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaa-agagcgacttgatcgtgactcaaccc 29325531  T
Q  188 ggtaat 193  Q
    ||||||    
T  29325530 ggtaat 29325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 34376014 - 34375908
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| |  ||||| |||||||| || |||||||||||||||||||||| |||||||||||| || |||||||||| |    
T  34376014 tgttttatcctggagacggcgcggttgctaatctacgttgcacaa-cttaggtagtgccgcgaaacgtctt-aaagaaagcgacctgatcgtgactcacc 34375917  T
Q  186 ccggtaata 194  Q
    ||| |||||    
T  34375916 ccgataata 34375908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 2818147 - 2818253
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||  | ||||||||||||| |||| |||||||  ||| ||||||||| |||||||||||| ||||||||| ||| |    
T  2818147 tgttttatcctggagacggcgcggtttctagtctaccttgcac-aacttaggtagtaacgcaaaacgtctt-aaagaaagcgacctggtcgtgattcacc 2818244  T
Q  186 ccggtaata 194  Q
     ||||||||    
T  2818245 tcggtaata 2818253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 11570748 - 11570848
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| |||| |||||||||    
T  11570748 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggttgtgactcaa 11570846  T
Q  185 cc 186  Q
    ||    
T  11570847 cc 11570848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 5740804 - 5740901
Alignment:
Q  100 ggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatctt 198  Q
    ||||||||||||| | ||| ||||||||||||||   |||||| || |||||||||| ||||| || ||| | ||| ||||||||||||||||| ||||    
T  5740804 ggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtctt-aaagagagtgacctagtcatgactcaacccggtaatctctt 5740901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 17964558 - 17964632
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  | ||||||| ||||||||||||||    
T  17964558 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaa 17964632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 6112973 - 6113072
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||||| | ||||| || |||||||||||||||  ||||||| || || ||  ||||||||| |||||| || || ||||||||||||    
T  6112973 tgttttatcctggaggcg-cacggttattagtctaccttgcacaatttcaggtaatgtcgtgattcgtcttaaa-gaaagcaacctgatcgtgactcaac 6113070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 6728397 - 6728440
Alignment:
Q  149 aacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaat 193  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||    
T  6728397 aacgtcttaaa-gaaagcgacctggtcgtgactcaccccggtaat 6728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 7e-44; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 27605064 - 27605261
Alignment:
Q  15 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 114  Q
    ||||||||||||||||||||||||||||||||||||| | |||| | | |||||||| || | ||| | | |||||||||||  |||||| |  ||||||    
T  27605064 accatattgagggtgttatttctcgaatgattacttacggtgcaatacataatcgaacaggtgaaccaagctgttttatcctagaggcggtgtagttgtt 27605163  T
Q  115 ggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttctt 213  Q
     ||||||||||||||||||| |||||||| |||||| ||||| ||||| ||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  27605164 agtctaccttgcacaaactcgggtagtgctgcgaaatgtctt-aaagagagcgacttggtcgtgactcaacctggtaatatattcgatggtgatttctt 27605261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 1688808 - 1689015
Alignment:
Q  9 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 107  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||| || | ||||||  | |||||||||  | |||||||    
T  1688808 gattaaatcatatttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcgaacaggtgaactagactattttatcctaaacgcggcgc 1688907  T
Q  108 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtga 207  Q
    | |||||  |||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||| ||| || |||||||||||| | |||    
T  1688908 gattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtctt-aaagaaagcgacctggtcgtgacttaactcgttaatatcttcggtgttga 1689006  T
Q  208 tttcttttt 216  Q
    |||| ||||    
T  1689007 tttcgtttt 1689015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 795326 - 795529
Alignment:
Q  8 tgattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 106  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||| || | |||| || |||||||||||| |||||||     
T  795326 tgattaaaccatatttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcgaacaggtgaactgggctgttttatcctggaggcggca 795425  T
Q  107 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtg 206  Q
    |||||||| |||||||||||| |||||| || |||| || | |||||||| | | ||||||   ||||||||||||||||||||  ||||||||| ||||    
T  795426 cggttgttagtctaccttgcataaactctggcagtgtcgtgcaacgtctt-acataaagcggtctggtcgtgactcaacccggtcctatcttcggtggtg 795524  T
Q  207 atttc 211  Q
    |||||    
T  795525 atttc 795529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 2617176 - 2617369
Alignment:
Q  8 tgattaaaccatattg--agggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggc 105  Q
    |||||||||||||||   || ||||||||||| ||| ||||||||| | ||| || | |||||||| ||    |||||  |||||||||||| |||||||    
T  2617176 tgattaaaccatatttttagagtgttatttctagaacgattacttacggtgcggtacataatcgaacaggcggactagactgttttatcctggaggcggc 2617275  T
Q  106 gcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 200  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||    
T  2617276 gcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtctt-aaagaaagcgacatggttgtgactcaaccctgtaatatcttcg 2617369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 1741029 - 1741178
Alignment:
Q  8 tgattaaaccatatt--gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggc 105  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||| | |||||| ||||||| || || | |||| ||||||||||||||| |||||||    
T  1741029 tgattaaaccatattttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcaaacaggtgaacttggttgttttatcctggaggcggc 1741128  T
Q  106 gcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtct 155  Q
    |||||||||  | | |||||||||||||||||||||| ||||||||||||    
T  1741129 gcggttgttaatttgccttgcacaaactcaggtagtgtcgcgaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 17368814 - 17368708
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 17368717  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  17368716 ccggtaata 17368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 3476946 - 3477051
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 3477043  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  3477044 ccggtaat 3477051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 17364160 - 17364052
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||| || ||||||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  17364160 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 17364062  T
Q  185 cccggtaata 194  Q
    ||||||||||    
T  17364061 cccggtaata 17364052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 20090662 - 20090768
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 20090759  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  20090760 ccggtaata 20090768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 20095787 - 20095893
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 20095884  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  20095885 ccggtaata 20095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 34129169 - 34129275
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcagc 34129266  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  34129267 ccggtaata 34129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 54270739 - 54270633
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || |||||||||||||||| |||||||| ||||||||| ||||||||||||| |    
T  54270739 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaatgtcttaaa-gaaagcgacctggtcgtgactcacc 54270642  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  54270641 ccggtaata 54270633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 23071488 - 23071681
Alignment:
Q  32 atttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaa 131  Q
    |||||||||| ||||| ||| | |||||| |||||||||| || |||| | |  | ||||||| || |||| || || ||||| || |||||| ||||||    
T  23071488 atttctcgaacgattatttaaggtgcagtacgtaatcgaacaggtaaaat-gactattttatcttggaggcagcacgtttgttagtataccttacacaaa 23071586  T
Q  132 ctcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttctttttcaaaatggtac 227  Q
    ||  |||| |||||| |||||||||||| |||| ||| |||||| |||||||||| | |||||||||||| ||||||||||||||||||| |||||    
T  23071587 cttgggtattgccgcaaaacgtcttaaa-gaaaacgatttggtcatgactcaacctgataatatcttcggtggtgatttctttttcaaaaaggtac 23071681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 26706951 - 26706808
Alignment:
Q  17 catattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgt---tttatcctgtaggcggcgcggttgt 113  Q
    |||||||||||||||||||||||||  ||||||||   ||||||||||||||||| || | |||| |  |||   ||||||||| ||||||||| |||||    
T  26706951 catattgagggtgttatttctcgaaccattacttacagtgcagtgcgtaatcgaacaggtgaactggactgtaattttatcctggaggcggcgcagttgt 26706852  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtctta 157  Q
    | ||||||||||||||||||  | |||||| |||||||||||||    
T  26706851 tagtctaccttgcacaaacttggatagtgctgcgaaacgtctta 26706808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 15763030 - 15763136
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |  |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  15763030 tgttttatcctggagacggcgcggttgctagtctaccttgcac-agttcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 15763127  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  15763128 ccggtaata 15763136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 33089343 - 33089448
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-ctagggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 33089440  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  33089441 ccggtaat 33089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 17357933 - 17357825
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||| || ||||||||||| | |||||||||||||| || | |||||||||||||||||||||| ||||||| |||| |||||||||||||     
T  17357933 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtctt-aaagaaatcgacctggtcgtgactcac 17357835  T
Q  185 cccggtaata 194  Q
    | ||||||||    
T  17357834 ctcggtaata 17357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 15768191 - 15768297
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |  |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  15768191 tgttttatcctggagacggcgcggttgctagtctaccttgcac-agttcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 15768288  T
Q  186 ccggtaata 194  Q
    || ||||||    
T  15768289 ccagtaata 15768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 13022122 - 13022017
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  |||||||||||||||||| |||||| | |||||| |||||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgttttaaaa-agagcgacctggtcgtgactcaac 13022025  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  13022024 ccgataat 13022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 23074427 - 23074549
Alignment:
Q  104 gcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggag 203  Q
    ||||| ||||| || |||||| ||||||||  |||| ||| || |||||||||||| ||||||||||||||| |||| || || | |||||||||||| |    
T  23074427 gcgcgtttgttagtataccttacacaaacttgggtattgctgcaaaacgtcttaaa-gaaagcgacttggtcatgacacagcctgataatatcttcggtg 23074525  T
Q  204 gtgatttctttttcaaaatggtac 227  Q
    |||||||||||||||||| |||||    
T  23074526 gtgatttctttttcaaaaaggtac 23074549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 4117600 - 4117712
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || | ||||||||| | ||||||||||||| |||| |||||||||||||||| ||||| || ||||||||| ||||||||||||| |    
T  4117600 tgttttatcctggagacagcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaatgtctt-aacgaaagcgacctggtcgtgactcacc 4117697  T
Q  186 ccggtaatatcttcg 200  Q
    || ||||||| ||||    
T  4117698 ccagtaatattttcg 4117712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 3482423 - 3482518
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 183  Q
    |||||||||||| || ||||||||||| | |||||||||||||||| | ||||| |||||||||| ||||| |||||||||||| |||||||||||||    
T  3482423 tgttttatcctggagacggcgcggttgctagtctaccttgcacaaa-ttaggtaatgccgcgaaaagtctt-aaagaaagcgacctggtcgtgactca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 55128885 - 55128790
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 183  Q
    |||||||||||| || ||||||||||| | ||||||||| ||||| || |||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  55128885 tgttttatcctggagacggcgcggttgctagtctaccttacacaa-cttaggtagtgccgcgaaacgtctt-aaagaaaacgacctggtcgtgactca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 20810467 - 20810362
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  |||||||| |||||||||||| ||||| | |||| |||||||||||||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgctgcgaaacgtctt-aaagagaacgacctggtcgtgactcaac 20810370  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  20810369 ccgataat 20810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 53119622 - 53119517
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  || ||||| ||||||| ||||||||||||| ||||   |||||||||||||||||||| ||||| |||||| || ||||||||||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgagtagtgccgcgaaacgtctt-aaagagagcgacctgatcgtgactcaac 53119525  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  53119524 ccggtaat 53119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 25023859 - 25023993
Alignment:
Q  21 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 120  Q
    ||||| ||||||||||| ||| ||||||||| | |||||| |||||||||| |  | || | || |  | ||||||| ||||||| |||||||| |||||    
T  25023859 ttgagtgtgttatttctagaacgattacttacggtgcagtacgtaatcgaacaagtgaattgggcttgtatatcctggaggcggcacggttgttagtcta 25023958  T
Q  121 ccttgcacaaactcaggtagtgccgcgaaacgtct 155  Q
    ||||||||||||| |||||||| || |||||||||    
T  25023959 ccttgcacaaactgaggtagtgtcgtgaaacgtct 25023993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 10586111 - 10586286
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   | |||||| || | |||| || |||||||||||| ||||  | |||||||    
T  10586111 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttgatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 10586209  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  10586210 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 10586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 38436991 - 38437101
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||| ||| ||||  | ||||||| ||||||||||| |||||||| ||| || ||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcac-aacttggatagtgccacgaaacgtctt-aaagaaagtgacctgatcgtgactcaac 38437088  T
Q  186 ccggtaatatctt 198  Q
    |||||||| ||||    
T  38437089 ccggtaatttctt 38437101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 758367 - 758467
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  ||||||||| ||||||||||| ||||| |||||  ||||||||||||||    
T  758367 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtctt-aaagagagcgatctggtcgtgactcaa 758465  T
Q  185 cc 186  Q
    ||    
T  758466 cc 758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 3419089 - 3418989
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| ||| |||| ||||| | |||| ||||||||||  |  || |||||| |||||||||||||| || |||||||||||||||||||||    
T  3419089 ttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacttggtcgtgactcaa 3418991  T
Q  185 cc 186  Q
    ||    
T  3418990 cc 3418989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 14438694 - 14438794
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  ||||||||| ||||||||||| |||||  ||||| ||||||||||||||    
T  14438694 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtctt-aaagagggcgacctggtcgtgactcaa 14438792  T
Q  185 cc 186  Q
    ||    
T  14438793 cc 14438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 23666122 - 23666222
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  23666122 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 23666220  T
Q  185 cc 186  Q
    ||    
T  23666221 cc 23666222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 24038370 - 24038470
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  24038370 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 24038468  T
Q  185 cc 186  Q
    ||    
T  24038469 cc 24038470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 29350334 - 29350234
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||  ||| | |||||| ||||||||||  |  || |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  29350334 ttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gaaagcgacatggtcgtgactcaa 29350236  T
Q  185 cc 186  Q
    ||    
T  29350235 cc 29350234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 39775727 - 39775827
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  39775727 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 39775825  T
Q  185 cc 186  Q
    ||    
T  39775826 cc 39775827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 1689896 - 1690069
Alignment:
Q  22 tgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctac 121  Q
    ||||||||||||||||| || ||||||||| | |||||  |||||||||| || | |||  ||  ||||| ||  | ||| |||| || |||| ||||||    
T  1689896 tgagggtgttatttctcaaacgattacttacggtgcagcacgtaatcgaacaggtgaaccgggcagttttgtctaggaggtggcgtggatgttagtctac 1689995  T
Q  122 cttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatct 197  Q
     ||||||||||||   |||| || ||||||||||||||  ||| ||| |||||||| |||||||||| ||||||||    
T  1689996 tttgcacaaactcgaatagtaccacgaaacgtcttaaa--aaaacgatttggtcgtaactcaacccgataatatct 1690069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 30341844 - 30341950
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||  || ||||||| | ||||||||| |||||  | |||||||||||||||||||||| |||||||| ||| ||||||||||||| |    
T  30341844 tgttttatcctggagatggtgcggttgctagtctaccttacacaattt-aggtagtgccgcgaaacgtctt-aaagaaagtgacctggtcgtgactcacc 30341941  T
Q  186 ccggtaata 194  Q
    ||| |||||    
T  30341942 ccgataata 30341950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 31002854 - 31002689
Alignment:
Q  23 gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctacc 122  Q
    ||||||||||||||||||| ||| |  |||| ||||||   ||||| || || | ||||||| |||||||||||| |||   | |||||||| |||||||    
T  31002854 gagggtgttatttctcgaacgatcatatatggtgcagtatttaatcaaacaggtgaactaggctgttttatcctggaggta-cacggttgttagtctacc 31002756  T
Q  123 ttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    ||||||||  || |||||||||| ||   ||||| |||||||||||| | |||||||||||||||||||    
T  31002755 ttgcacaatttcgggtagtgccgtgatttgtctt-aaagaaagcgacct-gtcgtgactcaacccggta 31002689  T

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Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 21494302 - 21494408
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||| | || ||||||||||||| ||||||||||||||||||  |||| || || || || |||| ||||| |||||| ||||||||||||||     
T  21494302 tgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatctt-aaagagagcgacctggtcgtgactcaat 21494400  T
Q  186 ccggtaat 193  Q
    || |||||    
T  21494401 ccagtaat 21494408  T

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Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 26962154 - 26962049
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| | ||||| ||||||||||||| ||||   |||||||| ||||||||||| ||||| |||||  |||||||||||||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcac-aacttgtgtagtgccacgaaacgtctt-aaagagagcgatctggtcgtgactcaac 26962057  T
Q  186 ccggtaat 193  Q
    || |||||    
T  26962056 ccagtaat 26962049  T

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Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 3672680 - 3672580
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  3672680 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 3672582  T
Q  185 cc 186  Q
    ||    
T  3672581 cc 3672580  T

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Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 3692712 - 3692612
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  3692712 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 3692614  T
Q  185 cc 186  Q
    ||    
T  3692613 cc 3692612  T

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Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 10321518 - 10321431
Alignment:
Q  105 cgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 194  Q
    |||||||| | |||||||||||||||  | || ||||||||||||||||||| |||||||||||| ||||||||||| | || |||||||    
T  10321518 cgcggttgctagtctaccttgcacaatttaag-tagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactgatcctggtaata 10321431  T

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Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 18467319 - 18467219
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||  | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  18467319 ttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 18467221  T
Q  185 cc 186  Q
    ||    
T  18467220 cc 18467219  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 20520148 - 20520048
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| | |||| |||||||||| ||  || |||||| ||||||||||| ||||| || ||| ||||||||||||||    
T  20520148 ttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtctt-aaagagagtgacctggtcgtgactcaa 20520050  T
Q  185 cc 186  Q
    ||    
T  20520049 cc 20520048  T

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Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 6024177 - 6024101
Alignment:
Q  124 tgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcgg 201  Q
    ||||| |||| |||||||||||||||||||||||||| | || ||| ||||| ||| ||||||| ||||| |||||||    
T  6024177 tgcacgaacttaggtagtgccgcgaaacgtcttaaaa-agagagacctggtcatgaatcaacccagtaatctcttcgg 6024101  T

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Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 7571217 - 7571317
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| | ||| | ||||  |||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  7571217 ttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 7571315  T
Q  185 cc 186  Q
    ||    
T  7571316 cc 7571317  T

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Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 45904449 - 45904552
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||||  | |||||||| |||||||||||||||  || |||||||| | ||   |||||||| |||| |||| |||||||||||||||    
T  45904449 tgttttatcctgaaggca-cacggttgttagtctaccttgcacaatttcgggtagtgctgtgatttgtcttaaa-gaaaacgacatggtcgtgactcaac 45904546  T
Q  186 ccggta 191  Q
    ||||||    
T  45904547 ccggta 45904552  T

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Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 49971423 - 49971523
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| | ||| | |||| ||||||||||  |  | ||||||| ||||||||||| ||||| | |||| ||||||||||||||    
T  49971423 ttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtctt-aaagagatcgacctggtcgtgactcaa 49971521  T
Q  185 cc 186  Q
    ||    
T  49971522 cc 49971523  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 25726843 - 25726890
Alignment:
Q  136 ggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  25726843 ggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaa 25726890  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 3033738 - 3033638
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||  |||||| | ||||| | |||| ||||||||||  |  || ||||||  ||||||||||||| || |||||| ||||||||||||||    
T  3033738 ttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 3033640  T
Q  185 cc 186  Q
    ||    
T  3033639 cc 3033638  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 8883264 - 8883168
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    ||||||||||||| |||| ||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||    
T  8883264 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactc 8883168  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 18472101 - 18472002
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  | ||| |||||| || ||| || | ||||| |||||| ||||||||||||||    
T  18472101 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgt-aaagagagcgacctggtcgtgactcaa 18472004  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 53358277 - 53358225
Alignment:
Q  147 gaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 200  Q
    ||||||||||||| ||||||||| ||| |||||||||||||  |||||||||||    
T  53358277 gaaacgtcttaaa-gaaagcgacctggccgtgactcaacccattaatatcttcg 53358225  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 45904902 - 45905008
Alignment:
Q  83 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    ||||||||||||||| ||||  | |||||||| ||||||| |||||||  || |||||||| | ||   |||||||| ||||||||| ||||||| ||||    
T  45904902 ggttgttttatcctggaggca-cacggttgttagtctaccctgcacaatttcgggtagtgctgtgatttgtcttaaa-gaaagcgacatggtcgtaactc 45904999  T
Q  183 aacccggta 191  Q
    || ||||||    
T  45905000 aatccggta 45905008  T

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Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 39543068 - 39542874
Alignment:
Q  15 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 114  Q
    |||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| || |||||| || | |||||||||| ||||   |||||||||    
T  39543068 accatactgagggtgttatttcttgaacgattacttatggtgcagtacgtaatcgaacag-taaactgggctattttatcctggaggcaatgcggttgtt 39542970  T
Q  115 ggtc-taccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgattt 210  Q
     ||| |||||| |||||||||| ||||||||| |||||||||| ||||| |||||| || ||||||||||| |||||| | ||||||| ||||||||    
T  39542969 agtcttaccttacacaaactcatgtagtgccgtgaaacgtctt-aaagagagcgacctgatcgtgactcaaaccggtattctcttcggtggtgattt 39542874  T

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Target: chr2; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 28945343 - 28945190
Alignment:
Q  8 tgattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 106  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||| || |  | |  | |||||||||||| ||||  ||    
T  28945343 tgattaaaccatatttgagggtgttatttctagaatgattacttacggtgcagtgcgtaatcgaacaggtggattgagctgttttatcctggaggcaacg 28945244  T
Q  107 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaa 160  Q
    |||||||| || ||||||||||||||||  ||||||||||||||||||||||||    
T  28945243 cggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaaa 28945190  T

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Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 11658811 - 11659012
Alignment:
Q  9 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 107  Q
    |||||| ||||||| ||||||||||||||||||  || |||||| | |||| | |||||||||| || | |||| |  ||||||||| || |||||| ||    
T  11658811 gattaagccatatttgagggtgttatttctcgac-gactacttacggtgcaatacgtaatcgaacaggtgaactggactgttttatcatggaggcggtgc 11658909  T
Q  108 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtga 207  Q
     |||||| |||||||||||||||| ||  ||||||||| |||| |||||||| ||||||||||||||| |||||||||| | |||||||||||| |||||    
T  11658910 agttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaa-gaaagcgacttggtcatgactcaacctgataatatcttcggtggtga 11659008  T
Q  208 tttc 211  Q
    ||||    
T  11659009 tttc 11659012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 39542434 - 39542617
Alignment:
Q  15 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 114  Q
    |||||||||||||||||||||||  || ||||||||||| |||| |  ||||||||| || | ||| ||||||| |||||||| |||| |||| ||||||    
T  39542434 accatattgagggtgttatttcttcaacgattacttatggtgcaatatgtaatcgaacaggtgaacaaggttgtcttatcctggaggcagcgcagttgtt 39542533  T
Q  115 ggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 199  Q
     ||||||||| |||||| ||| ||||||  | |||||||||| ||||| || ||||| |||||||||||||| |||||| |||||    
T  39542534 agtctaccttacacaaattcaagtagtgttgtgaaacgtctt-aaagagagtgacttagtcgtgactcaacctggtaatctcttc 39542617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 28751729 - 28751835
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||| ||||||| | ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||| |    
T  28751729 tgttttatcctggagacggtgcggttgcttgtctaccttgcacaa-cttaggtagtgccgcgaaacgtct-aaaagaaagcgacctggtcgtgactcacc 28751826  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  28751827 ccggtaata 28751835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 42723451 - 42723557
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 42723548  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  42723549 ccggtaata 42723557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 42728620 - 42728726
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 42728717  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  42728718 ccggtaata 42728726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 44096397 - 44096291
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 44096300  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  44096299 ccggtaata 44096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 44754596 - 44754702
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 44754693  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  44754694 ccggtaata 44754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 44759762 - 44759868
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 44759859  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  44759860 ccggtaata 44759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 40518472 - 40518578
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |  | ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactattt-aggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 40518569  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  40518570 ccggtaata 40518578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 42914737 - 42914632
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||| | |||| |||||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagagaacgacctggtcgtgactcaac 42914640  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  42914639 ccgctaat 42914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 19538552 - 19538377
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||| ||||||||||||||| ||||| ||| | || ||| | |||||||| |  | ||| ||  |||||||||||  ||||| | | |||||    
T  19538552 accatattagagagtgttatttctcgaacgattatttacggtgtagtacttaatcgaacaagtgaaccagactgttttatcctaaaggcg-cacagttgt 19538454  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | ||||||||||||||||||| | |||||||| |||| ||||| |||||||||||| |||||||||||||||||||||    
T  19538453 tagtctaccttgcacaaactcggatagtgccgtgaaatgtctt-aaagaaagcgacctggtcgtgactcaacccggta 19538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 6297823 - 6297989
Alignment:
Q  23 gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctacc 122  Q
    ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | ||||||| |||||||||||| ||||  | |||||||| |||||||    
T  6297823 gagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactaggatgttttatcctggaggca-cacggttgttagtctacc 6297921  T
Q  123 ttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    ||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  6297922 ttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 6297989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 5089378 - 5089268
Alignment:
Q  81 taggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgac 180  Q
    |||| |||||||||||| || ||||| ||||||| ||||||||||||| ||||  | ||||||||||||||||||| ||||| |||||| ||||| ||||    
T  5089378 taggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtctt-aaagagagcgacctggtcatgac 5089281  T
Q  181 tcaacccggtaat 193  Q
    |||| ||| ||||    
T  5089280 tcaatccgataat 5089268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 10160723 - 10160823
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  10160723 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 10160821  T
Q  185 cc 186  Q
    ||    
T  10160822 cc 10160823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 40392414 - 40392342
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
    |||||||||||| || ||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||||    
T  40392414 tgttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa 40392342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 30658359 - 30658260
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |   |||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  30658359 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 30658261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 28855077 - 28854996
Alignment:
Q  109 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    |||||| |||||||||| |||||||  | |||||||| |||||||||| ||||||||||||  ||| ||||||||||||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtctt-aaagaaagcgaccgggttgtgactcaacccggta 28854996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 1934992 - 1935092
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  1934992 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 1935090  T
Q  185 cc 186  Q
    ||    
T  1935091 cc 1935092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 22844878 - 22844791
Alignment:
Q  122 cttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgattt 210  Q
    ||||||||||||| | ||||| || |||| |||||||| ||||||||| ||||||||||||| |||  ||||||| |||| ||||||||    
T  22844878 cttgcacaaactcggatagtggcgtgaaatgtcttaaa-gaaagcgacatggtcgtgactcaccccaataatatcctcggtggtgattt 22844791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 29907416 - 29907510
Alignment:
Q  138 tagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttctttttcaaaatggtacgtttcta 234  Q
    ||||| ||||||||||||||||| | | |||| ||||||||||| ||||||||||| ||||||| | | | |||||||| |||| ||||||||||||    
T  29907416 tagtgtcgcgaaacgtcttaaaa-agatcgacctggtcgtgacttaacccggtaatctcttcggtgataaattcttttttaaaa-ggtacgtttcta 29907510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 17327502 - 17327455
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaact 133  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  17327502 tgttttatcctggaggcggcgcgattgttggtctaccttacacaaact 17327455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 27556738 - 27556640
Alignment:
Q  8 tgattaaaccata-ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggc 105  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| | |||| | |||||| ||| |  | |||| | |||||||||| || |||||||    
T  27556738 tgattaaaccatacttgagggtgttatttctcgaacgattacttacggtgcaatacgtaattgaacatgtgaactggattgttttatcatggaggcggc 27556640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 25497324 - 25497424
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||| |  || ||||   ||||||||||| ||||| |||||| ||||||||||||||    
T  25497324 ttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 25497422  T
Q  185 cc 186  Q
    ||    
T  25497423 cc 25497424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 30651025 - 30650925
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| | |||| ||||||||||  |  || |||||| |||||||||||||| || |||||  ||||||||||||||    
T  30651025 ttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgatctggtcgtgactcaa 30650927  T
Q  185 cc 186  Q
    ||    
T  30650926 cc 30650925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 18344527 - 18344429
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| || ||||| ||||  | |||| ||||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  18344527 ttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 18344429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 29677474 - 29677377
Alignment:
Q  88 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 186  Q
    |||||||||| |||||||| ||||| | |||| | ||||||||  |  || |||||| |||||||||||||| || |||||| || |||||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacatgatcgtgactcaacc 29677377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 7737850 - 7737950
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| | |||| |||| ||||| |||||| ||||||||||||||    
T  7737850 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttctt-aaagagagcgacatggtcgtgactcaa 7737948  T
Q  185 cc 186  Q
    ||    
T  7737949 cc 7737950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 19578413 - 19578513
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||| |||| |||| ||  ||||| | |||| ||||||||||  | |||||||||| | ||||||||| ||||| |||||  ||||||||||||||    
T  19578413 ttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtctt-aaagagagcgatctggtcgtgactcaa 19578511  T
Q  185 cc 186  Q
    ||    
T  19578512 cc 19578513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 25478296 - 25478396
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||| ||| |||||||| ||||| | |||| ||||||||||  |  || |||| | |||||||||||||| || |||||| |||| |||||||||    
T  25478296 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaa-gagagcgacctggttgtgactcaa 25478394  T
Q  185 cc 186  Q
    ||    
T  25478395 cc 25478396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 44683222 - 44683173
Alignment:
Q  110 ttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
    ||||| ||||||||| ||||||||| | |||||||||||||||| |||||    
T  44683222 ttgttagtctaccttacacaaactcggatagtgccgcgaaacgttttaaa 44683173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 31640 - 31534
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 31543  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  31542 ccggtaata 31534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 26468 - 26362
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||| |||| ||||| |    
T  26468 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacttgatcgtaactcatc 26371  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  26370 ccggtaata 26362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 16539412 - 16539518
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 16539509  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  16539510 ccggtaata 16539518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 16626250 - 16626144
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 16626153  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  16626152 ccggtaata 16626144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 42572040 - 42571934
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 42571943  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  42571942 ccggtaata 42571934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 47177119 - 47177224
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  47177119 tgttttatcctgaagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 47177216  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  47177217 ccggtaat 47177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 9973560 - 9973452
Alignment:
Q  83 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||||||| ||  | |||||||||||||||||||||| ||||||||| ||||||||||||    
T  9973560 ggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactc 9973463  T
Q  183 aacccggtaat 193  Q
    |||||||||||    
T  9973462 aacccggtaat 9973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 12934492 - 12934387
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| ||    
T  12934492 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aactcaggtagtgccgcgaaatgtctt-aaagaaagcgacctggtcgtgactc-ac 12934396  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  12934395 ccggtaata 12934387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 33238097 - 33237991
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 33238000  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  33237999 ccggtaata 33237991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 47999070 - 47998964
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 47998973  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  47998972 ccggtaata 47998964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 19640458 - 19640290
Alignment:
Q  21 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 120  Q
    ||||||||||||| ||||||| ||||| ||| | |||||| |||||||||| || | ||||  | |||||||||||| |||| || ||||| || |||||    
T  19640458 ttgagggtgttatctctcgaacgattatttacggtgcagtacgtaatcgaacaggtgaactgagctgttttatcctggaggc-gcacggttcttagtcta 19640360  T
Q  121 ccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    |||||||||||||| |||| || || |||||||||| |||||||| ||| || ||||||||||||| ||||    
T  19640359 ccttgcacaaactcgggtaatgtcgtgaaacgtctt-aaagaaagagacatgatcgtgactcaacctggta 19640290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 21081039 - 21081147
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||| || ||| ||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  21081039 tgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 21081137  T
Q  185 cccggtaata 194  Q
    ||||||||||    
T  21081138 cccggtaata 21081147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 2234630 - 2234736
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| ||||||||| || ||||||||||||| |    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcaacctggtcgtgactcacc 2234727  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  2234728 ccggtaata 2234736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 17495498 - 17495392
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    ||||||||| || || ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  17495498 tgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcacc 17495401  T
Q  186 ccggtaata 194  Q
     ||||||||    
T  17495400 tcggtaata 17495392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 17557716 - 17557822
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    ||||||||| || || ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  17557716 tgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcacc 17557813  T
Q  186 ccggtaata 194  Q
     ||||||||    
T  17557814 tcggtaata 17557822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 32212654 - 32212760
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || | ||||||||| | |||||||||||||||  | ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  32212654 tgttttatcctggagacagcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 32212751  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  32212752 ccggtaata 32212760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 33243274 - 33243168
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| || ||| ||||||||||||| |    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagtgacctggtcgtgactcatc 33243177  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  33243176 ccggtaata 33243168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 47993895 - 47993789
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| |||| |||||||| |    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggttgtgactcatc 47993798  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  47993797 ccggtaata 47993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 43892953 - 43892848
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | || |||||||||||| || ||||||||||| ||||||||||||| ||||||||| ||||||||||||| |    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcacaa-cttaggtagtgccgtgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 43892856  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  43892855 ccggtaat 43892848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 7875017 - 7875247
Alignment:
Q  10 attaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 108  Q
    ||||||||||||| |||| |||||||||||||| ||||||||| | |||||| |||||| ||  |  | | || |  || ||||||||| |||||||||     
T  7875017 attaaaccatatttgaggatgttatttctcgaacgattacttacggtgcagtacgtaattgatcaagtgagctggactgctttatcctgcaggcggcgca 7875116  T
Q  109 gttgttggtctaccttgcacaaactcaggtagtgcc---gcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggt 205  Q
    |||||| |||||| ||||||||||||  ||||||     | ||||||||||||| ||||||||| || || | |||||||| |||||||||||||| |||    
T  7875117 gttgttagtctacgttgcacaaactcgagtagtgatattgtgaaacgtcttaaa-gaaagcgacctgatcattactcaacctggtaatatcttcggtggt 7875215  T
Q  206 gatttc--tttttcaaaatggtacgtttctag 235  Q
    ||||||  |||||||| | ||||| |||||||    
T  7875216 gatttcgttttttcaacaaggtacttttctag 7875247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 28292506 - 28292607
Alignment:
Q  89 tttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccg 188  Q
    ||||||||| || ||||| ||||||| ||||||||||||| ||||  | ||||||||||||||||||||||||  |||||| ||||||||||| ||||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaaag--agcgacctggtcgtgacttaacccg 28292602  T
Q  189 gtaat 193  Q
    |||||    
T  28292603 gtaat 28292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 24528449 - 24528344
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  |||| |||||| ||||||||| ||||| |||||| |||||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtaatgccgcaaaacgtctt-aaagagagcgacctggtcgtgactcaac 24528352  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  24528351 ccgataat 24528344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 27256409 - 27256234
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||| |  || | |||| |   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  27256409 accatattagagggtgttatttctcgaacgatcatatacggtgcaatatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 27256311  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  27256310 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 27256234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 19309611 - 19309716
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||| ||||||||||||||||| ||||| |||||| |||| | |||||| |    
T  19309611 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtggtgccgcgaaacgtctt-aaagacagcgacctggttg-gactcacc 19309707  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  19309708 ccggtaata 19309716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 33226509 - 33226416
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgact 181  Q
    ||||||||||||  | ||||| ||||||| |||||||||||| || || |||||||||||||||||||||| ||||| |||||| |||||||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgcataa-cttaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgact 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 22857717 - 22857793
Alignment:
Q  116 gtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 194  Q
    ||||||||||||||| || || |||||||||||||||||||||| ||||||||| || |||||||||| ||||||||||    
T  22857717 gtctaccttgcacaa-cttagatagtgccgcgaaacgtcttaaa-gaaagcgacctgatcgtgactcaccccggtaata 22857793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 24169968 - 24170110
Alignment:
Q  17 catattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttgg 116  Q
    |||||||||||| |||||||||| ||| ||||||||| || ||| ||||||||||||  | || | | ||||||| ||||| | ||||| ||||||||      
T  24169968 catattgagggttttatttctcgcatgtttacttatggtgaagtacgtaatcgaaaaagtgaattggattgttttttcctggatgcggcacggttgttat 24170067  T
Q  117 tctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
     |||||||||||||| || | || || || |||||||||||||    
T  24170068 cctaccttgcacaaattcggatactgtcgtgaaacgtcttaaa 24170110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 4579604 - 4579504
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  4579604 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 4579506  T
Q  185 cc 186  Q
    ||    
T  4579505 cc 4579504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 8076146 - 8076040
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||| ||| ||||| | ||||  |||||||||  | ||| |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  8076146 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 8076048  T
Q  185 cccggtaa 192  Q
    ||| ||||    
T  8076047 cccagtaa 8076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 9650966 - 9651066
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  9650966 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 9651064  T
Q  185 cc 186  Q
    ||    
T  9651065 cc 9651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 26341295 - 26341195
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||| ||||| ||||| |||||| ||||||||||||||    
T  26341295 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctt-aaagagagcgacctggtcgtgactcaa 26341197  T
Q  185 cc 186  Q
    ||    
T  26341196 cc 26341195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 23866164 - 23866065
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  23866164 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 23866066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 12254175 - 12254069
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||||||||||||||| | ||| | |||| ||||||||||  | ||| |||||| | |||| |||| ||||| |||||| |||||| |||||||    
T  12254175 ttgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatctt-aaagagagcgacctggtcgcgactcaa 12254077  T
Q  185 cccggtaa 192  Q
    || |||||    
T  12254076 cctggtaa 12254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 23246932 - 23247030
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| |||||| |||| ||||| |||||| ||||||||||||||    
T  23246932 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatctt-aaagagagcgacctggtcgtgactcaa 23247030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 16372443 - 16372394
Alignment:
Q  136 ggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 186  Q
    ||||||||| |||||| ||||||| || |||||||||||||||||||||||    
T  16372443 ggtagtgccacgaaacatcttaaa-gagagcgacttggtcgtgactcaacc 16372394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 13314235 - 13314335
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| ||||| || || || | |||||||||||||||  |  || ||| || ||||||||||| ||||| |||||  ||||||||||||||    
T  13314235 ttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtctt-aaagagagcgatctggtcgtgactcaa 13314333  T
Q  185 cc 186  Q
    ||    
T  13314334 cc 13314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 19640258 - 19640225
Alignment:
Q  178 gactcaacccggtaatatcttcggaggtgatttc 211  Q
    |||||||||||||||||||||||| |||||||||    
T  19640258 gactcaacccggtaatatcttcggtggtgatttc 19640225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 20932642 - 20932687
Alignment:
Q  15 accatattgagggtgttatttctcgaatgattacttatgttgcagt 60  Q
    |||||||||| |||||||||||||||| ||||||||| | ||||||    
T  20932642 accatattgaaggtgttatttctcgaacgattacttacgatgcagt 20932687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 19687208 - 19687172
Alignment:
Q  15 accatattgagggtgttatttctcgaatgattactta 51  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  19687208 accatattgagagtgttatttctcgaacgattactta 19687172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 11251113 - 11251219
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 11251210  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  11251211 ccggtaata 11251219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 34318224 - 34318330
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||||| |    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacttggtcgtgactcatc 34318321  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  34318322 ccggtaata 34318330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 37404416 - 37404522
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 37404513  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  37404514 ccggtaata 37404522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 10106201 - 10106095
Alignment:
Q  83 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  10106201 ggttgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactc 10106104  T
Q  183 aacccggta 191  Q
    |||||||||    
T  10106103 aacccggta 10106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 36684715 - 36684821
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 36684812  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  36684813 ccggtaata 36684821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 37409537 - 37409643
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| |  ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  37409537 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 37409634  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  37409635 ccggtaata 37409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 33055205 - 33055030
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| |||||||||||||||||||  |||| ||| | |||||| | |||||||| || | |||| || |||||||||||| |||| || ||||||     
T  33055205 accatattagagggtgttatttctcgaacaattatttacgatgcagtacttaatcgaacaggtgaactgggctgttttatcctggaggc-gcacggttga 33055107  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | ||||||||||||||||||| |||||||||| ||   ||||| |||||||||||| |||| ||||||||||| ||||    
T  33055106 tagtctaccttgcacaaactcgggtagtgccgtgattagtctt-aaagaaagcgacatggttgtgactcaacctggta 33055030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 3584696 - 3584590
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | |||||||||||||||  | ||||||| ||||||||||||||||| ||||||||| ||||||||||||| |    
T  3584696 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagttccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 3584599  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  3584598 ccggtaata 3584590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 25188270 - 25188401
Alignment:
Q  84 gttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 183  Q
    ||||||||||| || || || | |||||||| |||||||||||||||||||| ||||||||||||||| ||||  |||||||| || || | ||||||||    
T  25188270 gttgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttctt-caagaaagcaacctgatagtgactca 25188368  T
Q  184 acccggtaatatcttcggaggtgatttcttttt 216  Q
    || || |||||||||||| ||||||| ||||||    
T  25188369 acacgataatatcttcggcggtgattacttttt 25188401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 27716538 - 27716432
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || || ||| |||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  27716538 tgttttatcctggagacgacgctgttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 27716441  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  27716440 ccggtaata 27716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 38734370 - 38734265
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaac 38734273  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  38734272 ccgataat 38734265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 5725074 - 5724979
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 183  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 5730200 - 5730094
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||| ||||||| | |||||||||||||||  | ||||||| ||||||||||||||||| ||||||||| ||||||||||||| |    
T  5730200 tgttttatcctggagacggtgcggttgctagtctaccttgcacaattt-aggtagttccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 5730103  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  5730102 ccggtaata 5730094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 11387846 - 11387936
Alignment:
Q  102 cggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 194  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||| |||| |||||    
T  11387846 cggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcaccccgataata 11387936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 13890908 - 13890805
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||| | ||||||| ||||||||||||||| ||  ||||||||||| |||||||||||| || |||||| |||||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaa-cttgggtagtgccgcaaaacgtcttaaa-gagagcgacctggtcgtgactcaac 13890811  T
Q  186 ccggta 191  Q
    ||||||    
T  13890810 ccggta 13890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 5602425 - 5602530
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    ||||||||| || || ||||| ||||||| ||||||||||||| ||||  |||||||| |||||||||||| ||||| |||||  |||||||||||||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcac-aactagggtagtgcagcgaaacgtctt-aaagagagcgatctggtcgtgactcaac 5602522  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  5602523 ccggtaat 5602530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 10135552 - 10135452
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||  |||||||| ||||| | |||| ||||||||||  | |||||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  10135552 ttgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 10135454  T
Q  185 cc 186  Q
    ||    
T  10135453 cc 10135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 41097880 - 41098055
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| |||| |||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  41097880 accatattagaggatgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 41097978  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  41097979 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 41098055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 48246683 - 48246755
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 159  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||    
T  48246683 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaa 48246755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 14724422 - 14724219
Alignment:
Q  9 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcgg-cg 106  Q
    |||||||||||||| || |||||||||||||||| ||||||||||  | || | | |||||||| |  | | ||  |||||||||||||| |||||| |     
T  14724422 gattaaaccatatttgacggtgttatttctcgaacgattacttatagtacaatacataatcgaacatgtgatctgtgttgttttatcctggaggcggtca 14724323  T
Q  107 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtg 206  Q
    |||||||| |||||||||| |||||||||| ||||||| | ||||||  | ||||||| |||| |||| ||||| ||| |  ||||||||||  | ||||    
T  14724322 cggttgttagtctaccttgtacaaactcagatagtgccacaaaacgtagt-aaagaaaacgacctggttgtgacacaatcatgtaatatctttagtggtg 14724224  T
Q  207 atttc 211  Q
    |||||    
T  14724223 atttc 14724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 4632855 - 4633025
Alignment:
Q  15 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 114  Q
    ||||||| |||||||||||||||| ||  |||| ||| | ||||||||||||||||| |  | ||||||| || |||||| || ||| | || | ||| |    
T  4632855 accatatcgagggtgttatttctcaaactattatttacgatgcagtgcgtaatcgaacaagtgaactagggtggtttatcatggaggagtcgtgattgat 4632954  T
Q  115 ggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 186  Q
       |||||||||||||| || | ||||||||| ||||||||| ||||| |||||| | ||||||||||||||    
T  4632955 aacctaccttgcacaaattcggatagtgccgcaaaacgtctt-aaagagagcgacatagtcgtgactcaacc 4633025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 8267758 - 8267931
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||||| |||   |||| | | |||||||| |  | |||| |||||||||||| || ||||  | |  ||||    
T  8267758 accatattagagggtgttatttctcgaacgattatttacagtgcaatacttaatcgaacatgtgaactgggttgttttatcttggaggca-cacaattgt 8267856  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgc-gaaacgtcttaaaagaaagcgacttggtcgtgactcaacccg 188  Q
    | ||||||||||||||||||| | ||||| ||  ||||||||||||| ||||||||| ||||||||||||||||||    
T  8267857 tagtctaccttgcacaaactcggatagtgtcggtgaaacgtcttaaa-gaaagcgacctggtcgtgactcaacccg 8267931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 26651166 - 26651271
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||| |||| |||| ||||| || ||| |||||||||||||||    
T  26651166 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcaaaacatctt-aaagagagtgacctggtcgtgactcaac 26651263  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  26651264 ccgataat 26651271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 39747165 - 39747270
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || || || ||||| | ||||||||||||||| ||  ||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaa-cttgggtagtgccgcgaaacgtctt-aaagagagcaacctggtcgtgactcaac 39747262  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  39747263 ccgataat 39747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 14582194 - 14582089
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||| | ||||||| ||||||||||||| ||||  |||||||||||||||| |||| ||||| |||||| || |||| |||||||    
T  14582194 tgttttatcctggagacggtgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacttctt-aaagagagcgacctgatcgtaactcaac 14582097  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  14582096 ccgataat 14582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 27711383 - 27711319
Alignment:
Q  102 cggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcga 168  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||| |||||||||||    
T  27711383 cggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtctt-aaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 40166076 - 40165976
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||  ||||||||  |||||| |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  40166076 ttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacatggtcgtgactcaa 40165978  T
Q  185 cc 186  Q
    ||    
T  40165977 cc 40165976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 18784548 - 18784647
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||| ||| |||||||| ||||| | |||| ||||||||||  | ||| |||||| ||||| ||||||||||  |||||| || |||||||||||    
T  18784548 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaaag--agcgacctgatcgtgactcaa 18784645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 23192816 - 23192916
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| ||| |||| ||||| | |||| ||||| ||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  23192816 ttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 23192914  T
Q  185 cc 186  Q
    ||    
T  23192915 cc 23192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 51041462 - 51041559
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  51041462 ttgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttg-ggcagtgccacgaaacgtcttaaaag--agcgacctggtcgtgactcaa 51041558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 19799012 - 19799112
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  | ||||||| ||||||||||| ||||| |||||  || |||||||||||    
T  19799012 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtctt-aaagagagcgatctgatcgtgactcaa 19799110  T
Q  185 cc 186  Q
    ||    
T  19799111 cc 19799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 47451224 - 47451324
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| | ||||  |||||||||  |  || ||||||  ||||||||||||| || |||||| ||||||||||||||    
T  47451224 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 47451322  T
Q  185 cc 186  Q
    ||    
T  47451323 cc 47451324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 13740 - 13845
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 13837  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  13838 ccggtaat 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 19212 - 19310
Alignment:
Q  100 ggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 199  Q
    |||| |||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||| |||    
T  19212 ggcgccgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacatggtcgtgactcaccccagtaatattttc 19309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 33917 - 34074
Alignment:
Q  34 ttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaact 133  Q
    ||||||||  ||||| |||  |||||| |||||| ||||||| |  |||||||||||||||||| ||| || |||||||||  ||||||||| |||||||    
T  33917 ttctcgaacaattacatattgtgcagtacgtaattgaaaagtgat-ctaggttgttttatcctgaaggaggagcggttgttattctaccttgtacaaact 34015  T
Q  134 caggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaat 193  Q
      ||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||    
T  34016 ttggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaacccgataat 34074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 9208 - 9314
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | |||| |||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 9305  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  9306 ccggtaata 9314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 3658 - 3552
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| |  ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  3658 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 3561  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  3560 ccggtaata 3552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 3153 - 3047
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 3056  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  3055 ccggtaata 3047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 81382 - 81488
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 81479  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  81480 ccggtaata 81488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 17955789 - 17955895
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcacc 17955886  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  17955887 ccggtaata 17955895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 21644081 - 21644187
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||| ||| |    
T  21644081 tgttttatcctggagtcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgattcacc 21644178  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  21644179 ccggtaata 21644187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 42514374 - 42514480
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||| ||||||| |    
T  42514374 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcatgactcacc 42514471  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  42514472 ccggtaata 42514480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 32015795 - 32015689
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||| ||||||||||| ||||| |||||| ||||||||||||| |    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcatc 32015698  T
Q  186 ccggtaata 194  Q
    |||||||||    
T  32015697 ccggtaata 32015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 19430109 - 19430004
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19430012  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  19430011 ccggtaat 19430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 19435611 - 19435506
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19435514  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  19435513 ccggtaat 19435506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 19566258 - 19566153
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19566161  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  19566160 ccggtaat 19566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 19571760 - 19571655
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19571663  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  19571662 ccggtaat 19571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 33616727 - 33616832
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| ||||||||||||||     
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaat 33616824  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  33616825 ccgataat 33616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 24884805 - 24884701
Alignment:
Q  88 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 187  Q
    |||||||||| || ||||| ||||| | ||||||||||||||| || |||||||||||| |||||||||||| |||||| || ||||||||||||| |||    
T  24884805 ttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcaaaacgtcttaaa-gaaagctacctggtcgtgactcacccc 24884708  T
Q  188 ggtaata 194  Q
    |||||||    
T  24884707 ggtaata 24884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 43999230 - 43999336
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || |||||| |||| | ||||||||||||| || | ||||||||||||||||||| || ||||||| |||| || ||||||||||||    
T  43999230 tgttttatcctggagacggcgcagttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgt-tttaaagaaaacgacctgatcgtgactcaac 43999327  T
Q  186 ccggtaata 194  Q
    || ||||||    
T  43999328 ccagtaata 43999336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 31030623 - 31030518
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| |||||||||||| ||  |  ||||||| |||||||||||||||| || |||||| |||||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataatttg-ggtagtgtcgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 31030526  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  31030525 ccgataat 31030518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 13584453 - 13584340
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaa-------actcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtg 178  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||       |||  ||||||||||||||||||||| ||||| |||||| ||||||||    
T  13584453 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtg 13584355  T
Q  179 actcaacccggtaat 193  Q
    | |||||| ||||||    
T  13584354 attcaacctggtaat 13584340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 33848117 - 33847991
Alignment:
Q  83 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 182  Q
    |||||||||||| |  ||||| | | |||||||||| ||||||||||||||| ||||||| |||||||| | ||  |||||| | || || |||||||||    
T  33848117 ggttgttttatcgtagaggcgacactgttgttggtccaccttgcacaaactcgggtagtggcgcgaaacat-tttgaagaaaactacctgatcgtgactc 33848019  T
Q  183 aacccggtaatatcttcggaggtgatttc 211  Q
    ||||| ||||||||||||| ||| |||||    
T  33848018 aaccc-gtaatatcttcggtggtaatttc 33847991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 37771828 - 37771707
Alignment:
Q  64 taatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaa 163  Q
    |||||||| || | |||| ||||||||||||||| ||||  | |||||||| ||||||||| |||||  || |||||||||| ||   |||||||| |||    
T  37771828 taatcgaacaggtgaactgggttgttttatcctggaggca-cacggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaa-gaa 37771731  T
Q  164 agcgacttggtcgtgactcaaccc 187  Q
    |||||| |||||||||||||||||    
T  37771730 agcgacctggtcgtgactcaaccc 37771707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 18876366 - 18876465
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  18876366 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaag--agcgacctggtcgtgactcaa 18876463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 19166730 - 19166630
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| || |||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  19166730 ttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacatggtcgtgactcaa 19166632  T
Q  185 cc 186  Q
    ||    
T  19166631 cc 19166630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 31449865 - 31449965
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  31449865 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 31449963  T
Q  185 cc 186  Q
    ||    
T  31449964 cc 31449965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 32010587 - 32010527
Alignment:
Q  133 tcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 194  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||| ||||||||||    
T  32010587 tcaggtagtgccgcgaaatgtcttaaaa-agagcgacctggtcgtgactcatcccggtaata 32010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 34818627 - 34818798
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | ||||  |||||||||||||| ||||  | || ||||    
T  34818627 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgagttgttttatcctggaggca-cacgattgt 34818725  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 187  Q
    | |||||||||||||||  || ||||||| || ||   |||||||| ||||||||| |||||||||||||||||    
T  34818726 tagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaaccc 34818798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 38182236 - 38182336
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| |  ||| |||||||||| ||  || |||||| |||||||| || ||||| |||||| ||||||||||||||    
T  38182236 ttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgt-tttaaagagagcgacctggtcgtgactcaa 38182334  T
Q  185 cc 186  Q
    ||    
T  38182335 cc 38182336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 44925922 - 44926022
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| |||||||| || ||||| |||||| ||||||||||||||    
T  44925922 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgt-tttaaagagagcgacctggtcgtgactcaa 44926020  T
Q  185 cc 186  Q
    ||    
T  44926021 cc 44926022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 40125884 - 40125984
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||  ||||||||||||||    
T  40125884 ttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgatctggtcgtgactcaa 40125982  T
Q  185 cc 186  Q
    ||    
T  40125983 cc 40125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 15875667 - 15875765
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||| | ||||| |||||| ||||||| ||||||    
T  15875667 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcct-aaagagagcgacctggtcgtaactcaa 15875765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 25367993 - 25368093
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| ||||  | |||||||| |||||||||||||||  || ||||||| || ||   ||||||||| |||| ||| |||||||||||||||    
T  25367993 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaaa-aaagtgacctggtcgtgactcaac 25368090  T
Q  186 ccg 188  Q
    |||    
T  25368091 ccg 25368093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 17026031 - 17025931
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| ||||| || | ||| | ||||  |||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  17026031 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 17025933  T
Q  185 cc 186  Q
    ||    
T  17025932 cc 17025931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 17556523 - 17556423
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| ||||| || | ||| | ||||  |||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  17556523 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 17556425  T
Q  185 cc 186  Q
    ||    
T  17556424 cc 17556423  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 17953872 - 17953972
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| |  |||  |||||||||  |  || |||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  17953872 ttgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-gaaagcgacatggtcgttactcaa 17953970  T
Q  185 cc 186  Q
    ||    
T  17953971 cc 17953972  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 33416643 - 33416543
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    |||||||||| || |||||||| ||||| | ||||  |||||||||  |  || |||||| |||||||||||||| || | |||| ||||||||||||||    
T  33416643 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-gagaccgacctggtcgtgactcaa 33416545  T
Q  185 cc 186  Q
    ||    
T  33416544 cc 33416543  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 34118562 - 34118462
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||  ||||| || ||||| | |||| ||||||||||  |  || ||||||  ||||||||||||| || |||||| ||||||||||||||    
T  34118562 ttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 34118464  T
Q  185 cc 186  Q
    ||    
T  34118463 cc 34118462  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 43302717 - 43302762
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaa 130  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||    
T  43302717 ttgttttatcctggaggcggcgtggttgatagtctaccttgcacaa 43302762  T

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Target: scaffold0060 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 37105 - 36999
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 37008  T
Q  186 ccggtaata 194  Q
    || ||||||    
T  37007 ccagtaata 36999  T

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Target: scaffold0027 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 43277 - 43070
Alignment:
Q  9 gattaaaccatattgagggtgtt-atttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 107  Q
    |||||||||||||| | || ||| |||||||||||||||||||| | || ||| |||||||||| |||||||| |||||||||||||||  || |||| |    
T  43277 gattaaaccatatttaaggggtttatttctcgaatgattacttacggtgtagtacgtaatcgaatagttaaacaaggttgttttatcctagagacggcac 43178  T
Q  108 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtctt----aaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggag 203  Q
    |||||||  | ||| |||||||||||  ||||||||  |||||  ||||    |||  |||||||| || | ||||| ||||||| |||||||||||| |    
T  43177 ggttgttaatttacattgcacaaacttgggtagtgctacgaaaattcttaaagaaattaaagcgacctgattgtgacgcaacccgataatatcttcggtg 43078  T
Q  204 gtgatttc 211  Q
    || |||||    
T  43077 gtaatttc 43070  T

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Target: scaffold0011 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 1660 - 1550
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| ||||||||||| |||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgacttaac 1563  T
Q  186 ccggtaatatctt 198  Q
    ||| |||| ||||    
T  1562 ccgataatttctt 1550  T

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Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 7141 - 7036
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| | |||| ||||||| |||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagaacgacctggtcgtaactcaac 7044  T
Q  186 ccggtaat 193  Q
    ||| ||||    
T  7043 ccgataat 7036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 2772 - 2877
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||| | ||||||||||| |||||  ||||| |||||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacgaaacgtctt-aaagagcgcgacctggtcgtgactcaac 2869  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  2870 ccggtaat 2877  T

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Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 10732 - 10837
Alignment:
Q  86 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 185  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||| | ||||||||||| |||||  ||||| |||||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacgaaacgtctt-aaagagcgcgacctggtcgtgactcaac 10829  T
Q  186 ccggtaat 193  Q
    ||||||||    
T  10830 ccggtaat 10837  T

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Target: scaffold0352 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 7200 - 7100
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  7200 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 7102  T
Q  185 cc 186  Q
    ||    
T  7101 cc 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 9886 - 9986
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  9886 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 9984  T
Q  185 cc 186  Q
    ||    
T  9985 cc 9986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 1154 - 1325
Alignment:
Q  15 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 113  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || ||||||||| || ||||  | |||||||    
T  1154 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcttggaggca-cacggttgt 1252  T
Q  114 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 187  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||    
T  1253 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaaccc 1325  T

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Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 45944 - 45776
Alignment:
Q  21 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 120  Q
    ||||||||||||||||||||| ||| |  || | ||||||   |||| ||| || | |||| || |||||||||||| ||||  | |||||||| |||||    
T  45944 ttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtgaactgggctgttttatcctggaggca-cacggttgttagtcta 45846  T
Q  121 ccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    ||||||||||  || |||||||||| ||   || || |||||||||||| |||| ||||||||||||||||    
T  45845 ccttgcacaatttcgggtagtgccgtgatttgt-tttaaagaaagcgacctggttgtgactcaacccggta 45776  T

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Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 152843 - 153011
Alignment:
Q  21 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 120  Q
    ||||||||||||||||||||| ||| |  || | ||||||   |||| ||| || | |||| || |||||||||||| ||||  | |||||||| |||||    
T  152843 ttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtgaactgggctgttttatcctggaggca-cacggttgttagtcta 152941  T
Q  121 ccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 191  Q
    ||||||||||  || |||||||||| ||   || || |||||||||||| |||| ||||||||||||||||    
T  152942 ccttgcacaatttcgggtagtgccgtgatttgt-tttaaagaaagcgacctggttgtgactcaacccggta 153011  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 4170 - 4070
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||| ||||| ||||| |||||| ||||||||||||||    
T  4170 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctt-aaagagagcgacctggtcgtgactcaa 4072  T
Q  185 cc 186  Q
    ||    
T  4071 cc 4070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 83162 - 83062
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||  ||||| | |||| ||||||| ||  |  ||| ||| | |||||||||||||| || |||||| ||||||||||||||    
T  83162 ttgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 83064  T
Q  185 cc 186  Q
    ||    
T  83063 cc 83062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 166085 - 166185
Alignment:
Q  85 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 184  Q
    ||||||||||||| |||||||| ||||| | || |  |||||||||  |  || |||||| ||||||||||| ||||| |||||| |||| |||||||||    
T  166085 ttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtctt-aaagagagcgacctggttgtgactcaa 166183  T
Q  185 cc 186  Q
    ||    
T  166184 cc 166185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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