View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18285_low_16 (Length: 352)

Name: NF18285_low_16
Description: NF18285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18285_low_16
NF18285_low_16
[»] chr1 (20 HSPs)
chr1 (1-340)||(13204653-13205007)
chr1 (1-255)||(13101194-13101448)
chr1 (1-255)||(13007394-13007648)
chr1 (1-255)||(13069920-13070174)
chr1 (1-266)||(19727347-19727612)
chr1 (1-175)||(13094593-13094767)
chr1 (1-175)||(13130022-13130196)
chr1 (1-169)||(13161715-13161883)
chr1 (1-262)||(30367845-30368106)
chr1 (92-255)||(13214104-13214267)
chr1 (96-202)||(13244315-13244421)
chr1 (96-232)||(13271878-13272014)
chr1 (118-218)||(12963689-12963789)
chr1 (7-218)||(13086307-13086521)
chr1 (1-71)||(19279096-19279166)
chr1 (6-71)||(13065141-13065206)
chr1 (113-261)||(13064951-13065099)
chr1 (12-70)||(13244450-13244508)
chr1 (1-70)||(13271780-13271849)
chr1 (9-71)||(13080793-13080855)
[»] chr6 (1 HSPs)
chr6 (113-254)||(31396420-31396562)


Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 13204653 - 13205007
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13204653 tcaaaaggtacaggaggataaagtctcaaggcttcacatatagctccatgaaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 13204752  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  13204753 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccaaaaaaaccaacttagacctgaact 13204852  T
Q  201 aactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttcccactcattt---------------cttctttcatccgagatttt 285  Q
    | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||               |||| ||| |||||| ||||    
T  13204853 agctggaccacttcctgctaagaagagagagagtgtatcgtctctaagaaacttcccactcatttcttcctttccatatccttccttcgtccgagctttt 13204952  T
Q  286 ccccagtcaaaataacattcgttcatttcttcactaccgttgtacttcctatgct 340  Q
     ||| | ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  13204953 tcccggacaaaataacattcgtccatttcttcactaccgttgtacttcctttgct 13205007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 13101194 - 13101448
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13101194 tcaaaaggtacaggaggataaagcctcaaggtttcacatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 13101293  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||| |||||||    
T  13101294 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccagaaaaaccaactgagagctgaact 13101393  T
Q  201 aactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttc 255  Q
    |||||| ||| |||||||||| |||||||||| |  || |||||||||| |||||    
T  13101394 aactgggccatttcctgctaaaaagagagtgattacattgtctctaagatacttc 13101448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 13007394 - 13007648
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    |||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||    
T  13007394 tcaaaaggtacaggaggataaagcctcatggcttcacatagagctccatggaggtacactagcttatcaagatccacatctctcaaaggagtctgattct 13007493  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaact 200  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||       |||||| |||||||||||    
T  13007494 cctcttgtgtgggccagttatctttgatttcttgaataattttggcttccacaataggatgagttgaaacaagccagaaaaaccaactgagacctgaact 13007593  T
Q  201 aactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttc 255  Q
    || ||  ||| |||||||||| |||||||||||   || |||||||||| |||||    
T  13007594 aattgtgccatttcctgctaaaaagagagtgaggacattgtctctaagatacttc 13007648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 13070174 - 13069920
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| | |||||||| ||||| |||||||||    
T  13070174 tcaaaaggtacaggaggataaagtctcaaggtttcacatatagctccatgaaggtacactagattatcaagatccacatctctccaaggagtctgattct 13070075  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaact 200  Q
    |||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||       |||||| ||||||||| |    
T  13070074 cctcttgtgtgggccagttatcttttatttcttgaataattttggcttccacaataggatgagttgaaacaagccagaaaaaccaactgagacctgaagt 13069975  T
Q  201 aactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttc 255  Q
    |||||  ||| |||||||||| ||||||| ||||| || |||||||||| |||||    
T  13069974 aactgtgccatttcctgctaaaaagagagagagtgcattgtctctaagatacttc 13069920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 19727347 - 19727612
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    ||||||||||||||||||||||| ||||||| ||  |||| | |||| ||||||||||||||||||||||||| | |||||||| ||||| |||| ||||    
T  19727347 tcaaaaggtacaggaggataaagtctcaaggcttaacatagatctccgtggaggtacactagcttatcaagatccacatctctcaaaggagtctggttct 19727446  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaact 200  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||       |||||| ||||||| |||    
T  19727447 cctcttgtgtgggccagttatctttgatttcttgaataattttggcttcgacaataggatgagtcgaaacaagccaaaaaaaccaactgagacctgtact 19727546  T
Q  201 aactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttcccactcatttc 266  Q
    |||||| ||| |||||||||| ||||||||||||  || |||||||||| ||||| || |||||||    
T  19727547 aactgggccatttcctgctaaaaagagagtgagtaaattgtctctaagatacttctcattcatttc 19727612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 13094593 - 13094767
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| | |||| ||| ||| |||| |||  |    
T  13094593 tcaaaaggtacaggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagatccacatccctcaaagtaatccgataat 13094692  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagcc 175  Q
    ||||| ||||    || |||||| |||| |||||||| |||||  ||||||||||||||| ||| |||| |||||    
T  13094693 cctctcgtgttaaccaattatctctgatctcttgaatgattttttcttccacaataggataagttgaaagaagcc 13094767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 13130022 - 13130196
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| | |||  ||| ||| |||| ||||      
T  13130022 tcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagatccacatgcctcaaagtaatccgattac 13130121  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagcc 175  Q
    ||||||||||    || ||||||||||| |||||||| |||||  ||||||||||||||| ||| |||| |||||    
T  13130122 cctcttgtgttaaccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaagaagcc 13130196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13161715 - 13161883
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||  | |||| ||| ||  |||| |||| |    
T  13161715 tcaaaaggtataggtggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagaaccacatccctcaaaataatccgattat 13161814  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaa 169  Q
    ||||||||||  | || ||||||||||| |||||||| |||||  ||||||||||||||| ||| ||||    
T  13161815 cctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaa 13161883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 30368106 - 30367845
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcgaaggaatctgattct 100  Q
    ||||||||||||| |||||| | ||||| || ||| |||||||||||||||||||| ||||||||||||||    ||  |  | ||||  |||  |||||    
T  30368106 tcaaaaggtacagtaggatacaacctcatggattcacatatagctccatggaggtagactagcttatcaaggctttccaccattgaagttatccaattct 30368007  T
Q  101 cctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaact 200  Q
    | | || ||    ||| ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||       |||||| |||| ||||||    
T  30368006 catgttttgatacacaattatctttgatctcttgaataattttggcttccacaataggatgagttgaaacaagccagaaaaaccaactgagacttgaact 30367907  T
Q  201 aactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttcccactca 262  Q
    || ||  ||| | ||||||||||| |||| ||||| || |||||||||| ||||| ||||||    
T  30367906 aagtgtgccattacctgctaacaaaagagagagtgcattgtctctaagatacttctcactca 30367845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 92 - 255
Target Start/End: Original strand, 13214104 - 13214267
Alignment:
Q  92 tctgattctcctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttag 191  Q
    ||||||||||||||| ||| ||  ||| |||||| ||||||||||| ||||| |||||||||||| ||||||| ||||||||||       |||| | ||    
T  13214104 tctgattctcctcttctgtgggcaagtaatcttttatttcttgaataattttagcttccacaataagatgagttgaaacaagccagaaaaaccaaatgag 13214203  T
Q  192 acctgaactaactggaccacttcctgctaacaagagagtgagtgtatcgtctctaagaaacttc 255  Q
    |||||||| |||||| ||| |||||||||| ||||||||||  | || |||||||||| |||||    
T  13214204 acctgaacgaactgggccatttcctgctaaaaagagagtgatcgcattgtctctaagatacttc 13214267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 13244421 - 13244315
Alignment:
Q  96 attctcctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacct 195  Q
    |||||||||||||||  |||| ||||||||||| |||||||| ||||| |||||| ||||||||||||| ||||||||||       |||||||||||||    
T  13244421 attctcctcttgtgttagacaattatctttgatctcttgaataattttcgcttccccaataggatgagttgaaacaagccaaaagaaccaacttagacct 13244322  T
Q  196 gaactaa 202  Q
    |||||||    
T  13244321 gaactaa 13244315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 13271878 - 13272014
Alignment:
Q  96 attctcctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacct 195  Q
    |||||||||||||||  |||| | ||||||||| |||||||| | ||| ||||||||| |||||||||| ||||||||||       |||||||||||||    
T  13271878 attctcctcttgtgttagacaatgatctttgatctcttgaataagttttgcttccacattaggatgagttgaaacaagccaaaagaaccaacttagacct 13271977  T
Q  196 gaactaactggaccacttcctgctaacaagagagtga 232  Q
    ||||||||||  ||| |||||||   |||||||||||    
T  13271978 gaactaactgttccatttcctgcagccaagagagtga 13272014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 12963789 - 12963689
Alignment:
Q  118 ttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaactaactggaccacttcctg 217  Q
    |||||||| || |||||||| ||||| | |||||||||||||||||| ||||||||||       |||||||||||||||||||||||  ||||||||||    
T  12963789 ttatctttaatctcttgaataattttagtttccacaataggatgagttgaaacaagccaaaagaaccaacttagacctgaactaactgttccacttcctg 12963690  T
Q  218 c 218  Q
    |    
T  12963689 c 12963689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 13086307 - 13086521
Alignment:
Q  7 ggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaagatactcatctctcga---aggaatctgattctcct 103  Q
    ||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||| |||| ||| |  ||| ||||  |   ||  | |  ||| ||||    
T  13086307 ggtacaggaggataaagcctcaatgcttcacatatagctccatgaaggtacactagtttattaagcttttcaactcttaaattagtgaccaaattatcct 13086406  T
Q  104 cttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaactaac 203  Q
    | ||||   |||| |||||||| || |||||||||||||| |||||||| ||   |||||| ||||||||||       |||||||||||||||||||||    
T  13086407 catgtgatagacaattatcttttatctcttgaattattttagcttccactatgaaatgagttgaaacaagccaagagaaccaacttagacctgaactaac 13086506  T
Q  204 tggaccacttcctgc 218  Q
    ||  |||||||||||    
T  13086507 tgttccacttcctgc 13086521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19279166 - 19279096
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaag 71  Q
    ||||| |||||||| ||||||||||| |||| ||| |||||||||||||| || || ||||||||||||||    
T  19279166 tcaaatggtacaggtggataaagccttaaggcttcacatatagctccatgaagataaactagcttatcaag 19279096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 13065206 - 13065141
Alignment:
Q  6 aggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaag 71  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| |||||||| | ||| ||||||||    
T  13065206 aggtacaggaggataaagccttaaggcttcacatatagctccgtggaggtaaattagtttatcaag 13065141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 13065099 - 13064951
Alignment:
Q  113 gacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccnnnnnnnccaacttagacctgaactaactggaccact 212  Q
    |||| |||||||| || |||||||| || ||||||||||||| |||||||   ||||||||||       |||||| ||||||||||||||||  ||  |    
T  13065099 gacaattatctttcatctcttgaataatcttggcttccacaacaggatgacatgaaacaagccaaaagaaccaactgagacctgaactaactgtgccgtt 13065000  T
Q  213 tcctgctaacaagagagtgagtgtatcgtctctaagaaacttcccactc 261  Q
    ||| |||||||| ||| ||| || |  |||||||||| ||||| |||||    
T  13064999 tcccgctaacaatagattgactgcagtgtctctaagatacttctcactc 13064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 13244508 - 13244450
Alignment:
Q  12 aggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaa 70  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||||||||    
T  13244508 aggaggatatagcctcaaggtttcacatatggctccatgaaggtaaacaagcttatcaa 13244450  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13271780 - 13271849
Alignment:
Q  1 tcaaaaggtacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaa 70  Q
    ||||| |||| |||||||||||| ||||||||||| ||||||||| |||| ||||| |  ||||||||||    
T  13271780 tcaaatggtataggaggataaagtctcaaggtttcacatatagctgcatgaaggtaaatcagcttatcaa 13271849  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 13080855 - 13080793
Alignment:
Q  9 tacaggaggataaagcctcaaggtttcgcatatagctccatggaggtacactagcttatcaag 71  Q
    ||||| |||||| ||||| |||| ||| ||||| |||||||| ||||| ||||||||||||||    
T  13080855 tacagaaggatatagccttaaggcttcacatatggctccatgaaggtaaactagcttatcaag 13080793  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 31396562 - 31396420
Alignment:
Q  113 gacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaa-caagccnnnnnnnccaacttagacctgaactaactggaccac 211  Q
    ||||||||||||  || |||||||| ||||||||||||||| |||||||||| |||| ||||||       |||||  |||| |||||||| ||  |||     
T  31396562 gacagttatcttgaatctcttgaataattttggcttccacattaggatgagttgaaaacaagccagaaaaaccaaccgagacttgaactaattgtgccat 31396463  T
Q  212 ttcctgctaacaagagagtgagtgtatcgtctctaagaaactt 254  Q
    ||||||||||||| |||| |||   || |||||||||| ||||    
T  31396462 ttcctgctaacaaaagagagagcacattgtctctaagatactt 31396420  T

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