View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18289_low_15 (Length: 211)
Name: NF18289_low_15
Description: NF18289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18289_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 11474437 - 11474622
Alignment:
| Q |
19 |
gaaagtactttttccacatcctgaatcagctgctagaccaatcacaattgtctgtgagtcacctgcaccacatgttatcaagtatcttctgttgttactg |
118 |
Q |
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| T |
11474437 |
gaaagtactttttccacatcctgaatcagctgctagaccaatcacaattgtctgtgagtcacctgctccacatgttatcaggtatcttctgttgttactg |
11474536 |
T |
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| Q |
119 |
ttagttcttctgttgctgctctttttggttgttgtgtagaacactacctgtttttgattaaaaccaacatgtgtttttgatgatgt |
204 |
Q |
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| T |
11474537 |
ttagttcttctgttgctgctctttttggttgttgtgtagaacactacctgtttttgattaaaaccaacatgtgtttttgatgatgt |
11474622 |
T |
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