View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18290_high_6 (Length: 395)
Name: NF18290_high_6
Description: NF18290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18290_high_6 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 367; Significance: 0; HSPs: 36)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 19 - 385
Target Start/End: Complemental strand, 9453837 - 9453471
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9453837 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
9453738 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9453737 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
9453638 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9453637 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
9453538 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctatg |
385 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9453537 |
gcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctatg |
9453471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 385
Target Start/End: Complemental strand, 9432850 - 9432484
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
9432850 |
catgtaaccaattgttcctcttgctgccgtcaaagtggcaatgcttttgtcaataggataaagctttgcaagaccaaagtccgaaactttagggatgaaa |
9432751 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9432750 |
ttttcgtccagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacaaccctgatgaagatatgaaattccaagagccactccaagag |
9432651 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9432650 |
atatctcatatatttggtcgttagatagagatataactccctctttgttgaaaatatatttatcaagtgagccattgggcatgtactcgtaaacaagagc |
9432551 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctatg |
385 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9432550 |
gcgttttgatccttcgacacaaaacccaacgagtcttaccacatttgaatggtatattctccctatg |
9432484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 384
Target Start/End: Original strand, 9399729 - 9400094
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
9399729 |
catgtaaccaattgttcctcttgctgccatcaaagtggcaatgcttttgtcaataggataaagctttgcaagaccaaagtccgaaactttagggatgaaa |
9399828 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9399829 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacaaccctgatgaagatatgaaattccttgagccactccaagag |
9399928 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9399929 |
atatctcatatatttggtcgttagttagagatataactccctctttgttgaaaatatatttatcaagtgagccattgggcatgtactcgtaaacaagagc |
9400028 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctat |
384 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9400029 |
tcgtttcgatccttcgacacaaaaccctatgagtcttaccacatttgaatggtatattcttcctat |
9400094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 384
Target Start/End: Complemental strand, 9486202 - 9485837
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||| || ||||||||||||| ||| |
|
|
| T |
9486202 |
catgtaaccgattgttcctcttgctgctgtcaaggtggcaatgcttttgtcaataggataaagctttgcaagaccaaagtccgaaactttagggacaaaa |
9486103 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9486102 |
ttttcgtcaagaagaatgttgtgaggcttaatatcaaaatgcaaaatttgcataccacagccttgatgaagatatgaaattccacgagccactccaagag |
9486003 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9486002 |
atatctcatatatttggtcgttagttagagatataactccctctttgttgaaaatatatttatcaagtgagccattgggcatgtactcgtaaacaagagc |
9485903 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctat |
384 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
9485902 |
acgtttcgatccttcgacacaaaacccaatgagtcttaccacatttgaatgatatattcttcctat |
9485837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 26 - 363
Target Start/End: Original strand, 9320006 - 9320343
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
|||||||||||||||||||| || |||| |||||||||| | ||| ||||||||||||| ||||||||||| ||||||||||| ||||| || || || | |
|
|
| T |
9320006 |
ccaattgttcctcttgctgcagttaaagtgacaatgctaatctcattaggataaagcttagcaagaccaaagtctgaaactttggggataaagttctcat |
9320105 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagagatatctc |
225 |
Q |
| |
|
||||||||||||| || ||||| ||||||||||||||||||||||| ||||| |||||||| | ||| | || |||||||||||||||||||||||||| |
|
|
| T |
9320106 |
caagaaggatgttatggggcttgatatcaaaatgcaaaatttgcatgtcacatccttgatgtaaataagccataccacgagccactccaagagatatctc |
9320205 |
T |
|
| Q |
226 |
atatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgtttt |
325 |
Q |
| |
|
||| |||| | | | | ||||| ||| ||||| | | |||||||||||||||| ||||| |||| |||| | || ||||||||||| || ||| |
|
|
| T |
9320206 |
atacattttctgataatttagagagatagtatcctctctagaggaaatatatttatcaagagagccattggacatgaattcataaacaagagcacgcttt |
9320305 |
T |
|
| Q |
326 |
gatccttcgacacaaaacccaatgagtcttaccacatt |
363 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||||||| |
|
|
| T |
9320306 |
gatccttcaacacaaaacccaataagtcgaaccacatt |
9320343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 385
Target Start/End: Complemental strand, 9318303 - 9317937
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| |||||||||||||| ||||| || |||| |||||||||| ||||| | |||||||||||||| |||||||| ||||||||||| || || || |
|
|
| T |
9318303 |
catgtatccaattgttcctctagctgcagttaaagtgacaatgctaatgtcatttggataaagctttgccagaccaaagtctgaaactttgggaataaag |
9318204 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|| || |||||||||||||| || ||||| |||||||||||||| |||||||| ||||| |||| ||| | ||| | ||||||||||||||||||||||| |
|
|
| T |
9318203 |
ttctcatcaagaaggatgttatggggcttgatatcaaaatgcaagatttgcatgtcacatccttcatgcaaataagcaattccacgagccactccaagag |
9318104 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
|||||||||| |||| | | ||| ||| ||||| | ||||| | |||| ||||||||||| ||||| ||||||||| | || |||||||| || |
|
|
| T |
9318103 |
atatctcatacattttcttgcaagttagatcaataacatcatctttagaggaaatgtatttatcaagagagccgttgggcatgaattcataaacaagtgc |
9318004 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctatg |
385 |
Q |
| |
|
|||||||||| || | |||||| ||||| ||||| |||||||||| ||||| |||||| |||||| |
|
|
| T |
9318003 |
acgttttgatctctcaaaacaaaaaccaataagtctaaccacatttgcatggtgtattcttcctatg |
9317937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 26 - 363
Target Start/End: Original strand, 9350323 - 9350660
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
|||||||||||||||||||| || |||| |||||||||| | ||| ||||||||||||| ||||||||||| ||||||||||| ||||| || || || | |
|
|
| T |
9350323 |
ccaattgttcctcttgctgcagttaaagtgacaatgctaatctcattaggataaagcttagcaagaccaaagtctgaaactttggggataaagttctcat |
9350422 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagagatatctc |
225 |
Q |
| |
|
||||||||||||| || ||||| ||||||||||||||||||||||| ||||| |||||||| | ||| | || |||||||||||||||| ||||||||| |
|
|
| T |
9350423 |
caagaaggatgttatggggcttgatatcaaaatgcaaaatttgcatgtcacatccttgatgtaaataagccataccacgagccactccaacagatatctc |
9350522 |
T |
|
| Q |
226 |
atatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgtttt |
325 |
Q |
| |
|
||| |||| | | | | ||||| ||| ||||| | | |||||||||||||||| ||||| |||| |||| | || ||||||||||| || ||| |
|
|
| T |
9350523 |
atacattttctgataacttagagagatagtatcctctctagaggaaatatatttatcaagagagccattggacatgaattcataaacaagagcacgcttt |
9350622 |
T |
|
| Q |
326 |
gatccttcgacacaaaacccaatgagtcttaccacatt |
363 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||||||| |
|
|
| T |
9350623 |
gatccttcaacacaaaacccaataagtcaaaccacatt |
9350660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 8956120 - 8956335
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| || | |||||| |
|
|
| T |
8956120 |
catgtaaccaattgttcctcttgcagccgtcaaagttacaatgctattgtcaacaggataaagttttgcaagaccaaagtctgaaaccttggcgatgaag |
8956219 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| || ||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||| | ||| | ||||||||| || |||||||||| |
|
|
| T |
8956220 |
tctttgtcaagaagaatgttatgaggcttgatatcaaaatgtaaaatttgcatgtcacaaccttgatgcaaataagcaattccacgtgcaactccaagag |
8956319 |
T |
|
| Q |
219 |
atatctcatatatttg |
234 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
8956320 |
atatctcatacatttg |
8956335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 8920793 - 8921008
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||| ||||||||||| || ||||||||||| | |||||| |
|
|
| T |
8920793 |
catgtaaccaattgttcctcttgcagcagtcaaagttacaatgctattgtcaactggataaagttttgcaagaccgaagtctgaaactttggcgatgaag |
8920892 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| | ||||||||| ||||| |||||||| || |||||||| ||||||||||| ||||| |||||||| | ||| | ||||||||| || |||||||||| |
|
|
| T |
8920893 |
tcatggtcaagaagtatgttatgaggcttgatgtcaaaatgtaaaatttgcatgtcacagccttgatgcaaataagcaattccacgtgcaactccaagag |
8920992 |
T |
|
| Q |
219 |
atatctcatatatttg |
234 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
8920993 |
atatctcgtacatttg |
8921008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 8932198 - 8932413
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||| |||||||||||||| ||||| ||||| | |||||| |
|
|
| T |
8932198 |
catgtaaccaattgttcctcttgcagcagtcaaagttacaatgctattgtcaactggataaagttttgcaagaccaaagtctgatactttggcgatgaag |
8932297 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| | ||||||||| ||||| |||||||| ||||| ||||| ||||||||||| ||||| |||||||| | ||| | ||||||||| || |||||||||| |
|
|
| T |
8932298 |
tcctggtcaagaagtatgttatgaggcttgatatcgaaatgtaaaatttgcatgtcacaaccttgatgcaaataagcaattccacgtgcaactccaagag |
8932397 |
T |
|
| Q |
219 |
atatctcatatatttg |
234 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
8932398 |
atatctcgtacatttg |
8932413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 8942114 - 8942329
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
||||||||||||||| ||||| || || |||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| || | ||||| |
|
|
| T |
8942114 |
catgtaaccaattgtacctctagcagcggtcatagttacaatgctattttcaataggataaagttttgcaagaccaaaatctgaaacctttgcaatgaag |
8942213 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| | ||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||| | ||| | ||||||||| || || |||||| |
|
|
| T |
8942214 |
tcctggtcaagaagtatgttatgaggcttgatatcaaaatgtaaaatttgcatgtcacaaccttgatgcaaataagcaattccacgtgcaacggcaagag |
8942313 |
T |
|
| Q |
219 |
atatctcatatatttg |
234 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8942314 |
atatctcatatatttg |
8942329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 19 - 353
Target Start/End: Complemental strand, 9255041 - 9254707
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| |||||||| || |||||||| || |||| |||||| ||| | ||| | |||||||||| |||||||||||| ||||||||||| ||| | || |
|
|
| T |
9255041 |
catgtatccaattgtcccccttgctgcggttaaagtgacaatactaatctcatttggataaagctgtgcaagaccaaagtctgaaactttggggttaaag |
9254942 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|| || || ||||||||||| || ||||| || |||||||||||||||||||| || || |||||||| | ||| | ||| ||| ||||||||||||||| |
|
|
| T |
9254941 |
ttctcatcgagaaggatgttatggggcttgatgtcaaaatgcaaaatttgcatttcgcatccttgatgtaaataagcaataccatgagccactccaagag |
9254842 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
||||||| || |||| | | | | ||||| ||| ||||| | | |||||||||||||||| || || |||| |||| | || ||||||||||| |
|
|
| T |
9254841 |
atatctcgtacattttctgataacttagagagatagtatcctctctagaggaaatatatttatcaagagaaccattggacatgaattcataaacaagagc |
9254742 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtc |
353 |
Q |
| |
|
|| |||||||| || |||||||||||||| |||| |
|
|
| T |
9254741 |
acgctttgatccctcaacacaaaacccaataagtc |
9254707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 8964616 - 8964797
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
||||| || |||||||| ||||||| | |||||||||||| || | |||||| ||||| || | ||||| || || ||||| ||| ||||||| || | |
|
|
| T |
8964616 |
ccaatggtacctcttgccgctgtcattgtgacaatgctattctctacaggatatagcttagccaatccaaagtcagagacttttggggtgaaattctcat |
8964715 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||| || || || || |||||||| | ||| |||||||| |
|
|
| T |
8964716 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatcttcatttcgcatccatggtgaagataagcaatcccacgagc |
8964797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 9234072 - 9233858
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
||||||||| | ||||||||||| || || || | |||||||||| || | ||| |||||||||||||| |||||||| ||||| || || | |||| |
|
|
| T |
9234072 |
catgtaacccaaagttcctcttgccgcagttaacggaacaatgctatcgttcacagggtaaagctttgcaagtccaaaatccgaaacctttggaacgaaa |
9233973 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| |||||| ||||| || || |||||||| ||||||||||| | ||||||||||||||| |||||||| ||||| || |||||||| | ||| ||| |
|
|
| T |
9233972 |
tcttcgtctagaagaatattatgaggcttgatatcaaaatgtagaatttgcatatcacaaccttgatgcagatactctatcccacgagctattccgagac |
9233873 |
T |
|
| Q |
219 |
atatctcatatattt |
233 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
9233872 |
atatttcatatattt |
9233858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 8873975 - 8873885
Alignment:
| Q |
125 |
tcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaa |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||| ||||| || ||||| ||||| | ||| |||||||| ||||||| |
|
|
| T |
8873975 |
tcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatcttcatttcacatccatgatggagataagcaatcccacgagctactccaa |
8873885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 9384322 - 9384532
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
||||||||| | ||||||||||| || || || | |||||||||| || | |||||| ||||||||||| |||||||| ||||| || || | || |
|
|
| T |
9384322 |
catgtaacccaaagttcctcttgccgcagttaaggtaacaatgctatcgttcacaggatatagctttgcaagtccaaaatccgaaacctttggaacaaac |
9384421 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| |||||| ||||| || || |||||||| ||||||||||| | ||||||||||||||| |||||||| |||||| || |||||||| | ||| |||| |
|
|
| T |
9384422 |
tcttcgtctagaagaatattatgaggcttgatatcaaaatgtagaatttgcatatcacatccttgatgcagatattctatcccacgagctattccgagag |
9384521 |
T |
|
| Q |
219 |
atatctcatat |
229 |
Q |
| |
|
|||| |||||| |
|
|
| T |
9384522 |
atatttcatat |
9384532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 10974343 - 10974543
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| ||||| ||||||||||| || || || | |||||||| || || ||||| |||| | ||||| |||||||| |||||||| || ||||| |
|
|
| T |
10974343 |
catgtatccaatcgttcctcttgcagcagttaatggcacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaa |
10974442 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
| ||| |||||||||||| | |||||||| |||||||| || | ||||| ||||||||| || | ||||| || ||||||||||||||| ||||||| |
|
|
| T |
10974443 |
tattcatcaagaaggatggtatgaggctttatatcaaagtgtagaattttcatatcacatccattatgaaagtactcaattccacgagccaccccaagag |
10974542 |
T |
|
| Q |
219 |
a |
219 |
Q |
| |
|
| |
|
|
| T |
10974543 |
a |
10974543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 9488647 - 9488846
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| || || ||||||||||| ||||| | || |||||||||||||| | ||||| | |||||| || | |||||||||||| || || |||| |
|
|
| T |
9488647 |
catgtatcccatagttcctcttgcagctgtaagagacacaatgctattgtccgttggatataactttgctagtctaaaatctgaaacctttggagtgaag |
9488746 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
||| |||||||||| ||||| |||||||| || |||||||||||||| ||| ||||||||| ||| |||||| ||| ||||| || || ||||||| |
|
|
| T |
9488747 |
tttacgtcaagaagaatgttatgaggctttatgtcaaaatgcaaaatcctcatgtcacaccctctatgtagatattcaataccacgggctacaccaagag |
9488846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 11005035 - 11004881
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| || || | |||||||| ||||| ||||| ||| | | || | |||||||| |||||||| || ||||| |
|
|
| T |
11005035 |
catgtatccaatggttcctcttgctgcagttaaggacacaatgcttttgtctgtaggagaaaccctagctaatccaaaatcagaaacttttggattgaaa |
11004936 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatat |
173 |
Q |
| |
|
||||| |||||||||||||| |||||||| |||||||| || | ||||| ||||| |
|
|
| T |
11004935 |
ttttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatat |
11004881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 11007825 - 11007979
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| || || | |||||||| || || ||||| |||| | ||||| |||||||| |||||||| || ||||| |
|
|
| T |
11007825 |
catgtatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaa |
11007924 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatat |
173 |
Q |
| |
|
||||| |||||||||||||| |||||||| || ||||| || | ||||| ||||| |
|
|
| T |
11007925 |
ttttcatcaagaaggatgttatgaggctttatgtcaaagtgtagaattttcatat |
11007979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 10914699 - 10914840
Alignment:
| Q |
32 |
gttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgtcaagaa |
131 |
Q |
| |
|
|||||||||||||| || || | |||||||| || || ||||| ||||| | || || |||||||| |||||||| || |||||||||| ||||||| |
|
|
| T |
10914699 |
gttcctcttgctgcagttaatgacacaatgcttttatctgtaggagaaagcctggctagtccaaaatcagaaacttttggattgaaattttcatcaagaa |
10914798 |
T |
|
| Q |
132 |
ggatgttgtgaggcttaatatcaaaatgcaaaatttgcatat |
173 |
Q |
| |
|
||||||| |||||||| |||||||| || | ||||| ||||| |
|
|
| T |
10914799 |
ggatgttatgaggctttatatcaaagtgtagaattttcatat |
10914840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 11033285 - 11033433
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
||||| |||||||||||||| || || | ||||||||| || || ||||| |||| | || || |||||||| |||||||| ||| ||||||| || | |
|
|
| T |
11033285 |
ccaatggttcctcttgctgcagttaatgtgacaatgcttttatctgtaggacaaagtctagctagtccaaaatcagaaacttttgggttgaaattctcat |
11033384 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatc |
174 |
Q |
| |
|
||||||||||||| |||||||| || ||||| || | ||||| |||||| |
|
|
| T |
11033385 |
caagaaggatgttatgaggctttatgtcaaagtgtagaattttcatatc |
11033433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 8942367 - 8942458
Alignment:
| Q |
272 |
atatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgttttgatccttcgacacaaaacccaatgagtcttaccacatt |
363 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| | || ||||||||||| | ||||||||| || |||||||| ||||| |||| |||||||| |
|
|
| T |
8942367 |
atatatttatcaagagagccattgggcatgaaatcataaacaagagctctttttgatccctcaacacaaaatccaataagtcgcaccacatt |
8942458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 10979488 - 10979558
Alignment:
| Q |
86 |
gcaagaccaaaatctgaaactttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatcaaa |
156 |
Q |
| |
|
||||| |||||||| |||||||| || |||||||||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
10979488 |
gcaagtccaaaatcagaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaa |
10979558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 378
Target Start/End: Original strand, 8999855 - 9000119
Alignment:
| Q |
114 |
tgaaattttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactcc |
213 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| | ||| || || || || || ||||| | ||| |||||||| ||||| |
|
|
| T |
8999855 |
tgaagttttcatcaagaaggatgttgtgaggcttgatatcaaaatgtaaaatcttcatttcgcatccatggtggagataagcaatcccacgagctactcc |
8999954 |
T |
|
| Q |
214 |
aagagatatctcatatatttggtcgttag-taagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaac |
312 |
Q |
| |
|
|| ||||| ||| | |||||| | ||| | | | || | ||| ||||| ||||||| ||||||||||||| || || |||||| | || ||||| |
|
|
| T |
8999955 |
aactgatatgtcaaaaatttgg-ctatagcttatatttacacttccttctttagagaaaataaatttatcaagtgatccattaggcatgaattcataaac |
9000053 |
T |
|
| Q |
313 |
aagagcgcgttttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattct |
378 |
Q |
| |
|
|||||| ||||| ||||| |||| |||||| |||| | || ||||||||| |||| |||||||| |
|
|
| T |
9000054 |
aagagcacgtttcgatccctcgatacaaaatccaagtaatcgtaccacattcaaatgatatattct |
9000119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 9056665 - 9056854
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
|||||||| ||| | ||||| |||| | |||||||||||| ||| ||||| |||||||| || ||||| || || | || || || ||||| |||| |
|
|
| T |
9056665 |
ccaattgtgcctttggctgcagtcattgtgacaatgctattcgtaattggatatagctttgcgagtccaaagtcagatatctttggaataaaattctcgt |
9056764 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaa |
215 |
Q |
| |
|
|||| ||||| ||||| ||||| ||||||||||||||||||| ||| ||||| || | ||| ||||| ||| |||||||| ||||||| |
|
|
| T |
9056765 |
caagtaggatattgtgtggcttgatatcaaaatgcaaaattttcatttcacatccattatggagataatcaatcccacgagctactccaa |
9056854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 9096735 - 9096626
Alignment:
| Q |
106 |
tttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacga |
205 |
Q |
| |
|
||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| ||||| | ||| ||||| || || |||||||| | ||| |||||| |
|
|
| T |
9096735 |
tttagggataaagttctcatcaagaaggatattgtggggcttgatatcaaaatgtaaaatcttcatttcacatccgtggtgaagataagcaatcccacga |
9096636 |
T |
|
| Q |
206 |
gccactccaa |
215 |
Q |
| |
|
|| ||||||| |
|
|
| T |
9096635 |
gctactccaa |
9096626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 9104917 - 9104808
Alignment:
| Q |
106 |
tttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacga |
205 |
Q |
| |
|
||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| ||||| | ||| ||||| || || |||||||| | ||| |||||| |
|
|
| T |
9104917 |
tttagggataaagttctcatcaagaaggatattgtggggcttgatatcaaaatgtaaaatcttcatttcacatccgtggtgaagataagcaatcccacga |
9104818 |
T |
|
| Q |
206 |
gccactccaa |
215 |
Q |
| |
|
|| ||||||| |
|
|
| T |
9104817 |
gctactccaa |
9104808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 11010994 - 11011187
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
||||| |||||||||||||| || || | |||||||| || || ||||| |||| | || || |||||||| |||||||| || |||||||||| | |
|
|
| T |
11010994 |
ccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagctagtccaaaatcagaaacttttggattgaaattttcat |
11011093 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagaga |
219 |
Q |
| |
|
||||||| ||||| |||||||| |||||||| || | ||||| ||||| || || ||||| | || ||| |||||||||||||||||||| |
|
|
| T |
11011094 |
caagaagaatgttatgaggctttatatcaaagtgtagaattttcatattgcatccatgatgcaagtactcaatgccacgagccactccaagaga |
11011187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 218
Target Start/End: Original strand, 9464252 - 9464414
Alignment:
| Q |
56 |
acaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatcaa |
155 |
Q |
| |
|
|||||||||||||| | ||||| | |||||| || | |||||| ||||| || || |||| ||| |||||||||| ||||| |||||||| || |||| |
|
|
| T |
9464252 |
acaatgctattgtccgttggatataactttgctagtcaaaaatccgaaacctttggagtgaagtttacgtcaagaagaatgttatgaggctttatgtcaa |
9464351 |
T |
|
| Q |
156 |
aatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|||||||||| ||| ||||||||| ||| |||||| ||| ||||| || || ||||||| |
|
|
| T |
9464352 |
aatgcaaaatcctcatgtcacaccctctatgtagatattcaataccacgcgctacaccaagag |
9464414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 10903530 - 10903660
Alignment:
| Q |
26 |
ccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaattttcgt |
125 |
Q |
| |
|
||||| |||||||||||||| || || | |||||||| || || ||||| |||| | ||||| |||||||| |||||||| || ||||| |||| | |
|
|
| T |
10903530 |
ccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggagaaagtctggcaagtccaaaatcagaaacttttggattgaaactttcat |
10903629 |
T |
|
| Q |
126 |
caagaaggatgttgtgaggcttaatatcaaa |
156 |
Q |
| |
|
||||||| ||||| |||||||| |||||||| |
|
|
| T |
10903630 |
caagaagaatgttatgaggctttatatcaaa |
10903660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 8921044 - 8921121
Alignment:
| Q |
270 |
aaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgttttgatccttcgacacaaaacccaa |
347 |
Q |
| |
|
|||||||| ||||||| ||||| || |||||| | || ||||||||||| ||||||||||| || |||||||| |||| |
|
|
| T |
8921044 |
aaatatatctatcaagagagccatttggcatgaaatcataaacaagagcacgttttgatccctcaacacaaaatccaa |
8921121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 8956371 - 8956431
Alignment:
| Q |
270 |
aaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgttttgatcc |
330 |
Q |
| |
|
|||||||| ||||||| ||||| ||||||||| | || ||||||||||| ||||||||||| |
|
|
| T |
8956371 |
aaatatatctatcaagagagccattgggcatgaaatcataaacaagagcacgttttgatcc |
8956431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 8932449 - 8932507
Alignment:
| Q |
270 |
aaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgttttgat |
328 |
Q |
| |
|
|||||||| ||||||| ||||| ||||||||| | || ||||||||||| ||||||||| |
|
|
| T |
8932449 |
aaatatatctatcaagagagccattgggcatgaaatcataaacaagagcacgttttgat |
8932507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 9082465 - 9082356
Alignment:
| Q |
106 |
tttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacga |
205 |
Q |
| |
|
||||||||| || || || ||||| | ||| ||||| ||||| ||||||||||| ||||| | ||| ||||| || || |||||||| | ||| |||||| |
|
|
| T |
9082465 |
tttagggataaagttctcatcaagcaagatattgtggggcttgatatcaaaatgtaaaatcttcatttcacatccatggtgaagataagcaatcccacga |
9082366 |
T |
|
| Q |
206 |
gccactccaa |
215 |
Q |
| |
|
|| ||||||| |
|
|
| T |
9082365 |
gctactccaa |
9082356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 8964858 - 8964938
Alignment:
| Q |
268 |
gaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgttttgatccttcgacacaaaacccaat |
348 |
Q |
| |
|
||||||| |||||||||| || || || | |||| | || ||||||||||| || |||||||| ||||||||||| ||||| |
|
|
| T |
8964858 |
gaaaataaatttatcaagggatccattagacatgaattcataaacaagagcacggtttgatccctcgacacaaaaaccaat |
8964938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 384
Target Start/End: Original strand, 9159693 - 9160054
Alignment:
| Q |
23 |
taaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaatttt |
122 |
Q |
| |
|
||||||||||||||||||||||| || ||| ||||| ||||||||| ||||||||||||||||||||||||| || ||||| || ||||| || || | |
|
|
| T |
9159693 |
taaccaattgttcctcttgctgcagttaaatttacaatactattgtcattaggataaagctttgcaagaccaaagtcagaaaccttggggataaagttct |
9159792 |
T |
|
| Q |
123 |
cgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagagatat |
222 |
Q |
| |
|
|||||||||| ||||| || ||||| |||||||||||||| |||||||| ||||| |||||||| | ||| | |||||||||||||||||||| |||||| |
|
|
| T |
9159793 |
cgtcaagaagtatgttatggggcttgatatcaaaatgcaagatttgcatgtcacatccttgatgcaaataagcaattccacgagccactccaatagatat |
9159892 |
T |
|
| Q |
223 |
ctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagcgcgt |
322 |
Q |
| |
|
|||||| |||| | | ||| ||| ||||| | ||||| | |||| ||||||||||| ||||| ||||||||| | || |||||||||| | | |
|
|
| T |
9159893 |
ctcatacattttcttataagttagattaataacatcatctttagaggaaatgtatttatcaagagagccgttgggcatgaattcataaacaagagtacat |
9159992 |
T |
|
| Q |
323 |
tttgatccttcgacacaaaacccaatgagtcttaccacatttgaatggtatattctccctat |
384 |
Q |
| |
|
||||||| || |||||||| ||||| |||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
9159993 |
tttgatctctccacacaaaatccaataagtcttaccacatttgcatggtgtattcttcctat |
9160054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 353
Target Start/End: Complemental strand, 15927209 - 15926875
Alignment:
| Q |
19 |
catgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatctgaaactttagggatgaaa |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| || |||| |||||| ||| | ||| ||||||||||||||||||||||||| || |||||||| ||||| || |
|
|
| T |
15927209 |
catgtatccaatcgttcctcttgctgcagttaaagtgacaatactaatctcattaggataaagctttgcaagaccaaagtcggaaactttggggataaag |
15927110 |
T |
|
| Q |
119 |
ttttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagag |
218 |
Q |
| |
|
|| || |||||||||||||| || ||||| || |||||||||||||||||||| | ||| |||||||| | || | || |||||||| |||||||||| |
|
|
| T |
15927109 |
ttctcatcaagaaggatgttatggggcttgatgtcaaaatgcaaaatttgcatgttacatccttgatgtaagtaagccataccacgagcaactccaagag |
15927010 |
T |
|
| Q |
219 |
atatctcatatatttggtcgttagtaagagatataactccctctttgttgaaaatatatttatcaagtgagcctttgggcatgtactcgtaaacaagagc |
318 |
Q |
| |
|
|||||||||| ||||| | | ||| ||||| ||| | |||| | |||||||||||||||| || || ||||||||| | || ||||||||||| |
|
|
| T |
15927009 |
atatctcatacatttgcttataagttagagagatagcatcctcgctagaagaaatatatttatcaagagaaccattgggcatgaattcataaacaagagc |
15926910 |
T |
|
| Q |
319 |
gcgttttgatccttcgacacaaaacccaatgagtc |
353 |
Q |
| |
|
|| |||||||| || |||||||| ||||| |||| |
|
|
| T |
15926909 |
acgctttgatccctcaacacaaaatccaataagtc |
15926875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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