View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18291_low_36 (Length: 295)
Name: NF18291_low_36
Description: NF18291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18291_low_36 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 51154597 - 51154859
Alignment:
| Q |
14 |
agaggaaagtagataacttaacgaaagatttagatagaagatatgatggatcatataaactgaagacgaagatgcttgagttgcaagtaacagatcatag |
113 |
Q |
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| T |
51154597 |
agaggaaagtagataacttaacgaaagatttagatagaagatatgatggatcatataaactgaagacgaagatgcttgagttgcaagtaacagatcatag |
51154696 |
T |
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| Q |
114 |
atcagaagaagagtctgttcgtgaagaagaatgcttaatggataaaggtgattacttggagacactgaggagaaaacttgaggtagagaaggagaagcat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51154697 |
atcagaagaagagtctgttcgtgaagaagaatgcttaatggataaaggtgattacttggagacactgaggagaaaacttgaggtagagaaggagaagcat |
51154796 |
T |
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| Q |
214 |
tacagttgcatgcaagaaactcagaggatgacattgaatggattgcaatttgggttttctcaa |
276 |
Q |
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| T |
51154797 |
tacagttgcatgcaagaaactcagaggatgacattgaatggattgcaatttgggttttctcaa |
51154859 |
T |
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