View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18295_low_9 (Length: 203)

Name: NF18295_low_9
Description: NF18295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18295_low_9
NF18295_low_9
[»] chr2 (39 HSPs)
chr2 (18-112)||(19980687-19980781)
chr2 (104-203)||(44860323-44860422)
chr2 (137-201)||(2423874-2423938)
chr2 (155-203)||(21616765-21616813)
chr2 (149-203)||(31808080-31808134)
chr2 (154-203)||(23718029-23718078)
chr2 (154-203)||(24105701-24105750)
chr2 (108-201)||(27286253-27286346)
chr2 (154-203)||(37411251-37411300)
chr2 (18-82)||(5891727-5891791)
chr2 (147-203)||(18276524-18276580)
chr2 (148-199)||(5367199-5367250)
chr2 (148-203)||(34691806-34691861)
chr2 (148-203)||(34714218-34714273)
chr2 (148-202)||(18889592-18889646)
chr2 (157-203)||(28677912-28677958)
chr2 (148-198)||(32199141-32199191)
chr2 (152-198)||(35449521-35449567)
chr2 (115-200)||(18420402-18420487)
chr2 (144-193)||(38355884-38355933)
chr2 (18-95)||(44860360-44860437)
chr2 (116-200)||(30717499-30717583)
chr2 (107-191)||(32749785-32749869)
chr2 (147-198)||(17776595-17776646)
chr2 (148-203)||(18570975-18571030)
chr2 (161-200)||(21782832-21782871)
chr2 (148-203)||(42832277-42832332)
chr2 (161-203)||(1327981-1328023)
chr2 (148-198)||(23406876-23406926)
chr2 (149-203)||(39279678-39279732)
chr2 (154-203)||(29970556-29970605)
chr2 (170-198)||(2331802-2331830)
chr2 (148-196)||(13204035-13204083)
chr2 (148-192)||(15909633-15909677)
chr2 (148-188)||(20242728-20242768)
chr2 (147-203)||(21091726-21091782)
chr2 (148-196)||(27447015-27447063)
chr2 (154-198)||(30527602-30527646)
chr2 (159-203)||(41942108-41942152)
[»] chr4 (39 HSPs)
chr4 (95-203)||(30982826-30982934)
chr4 (96-203)||(903925-904032)
chr4 (137-203)||(35723374-35723441)
chr4 (147-197)||(9996849-9996899)
chr4 (154-203)||(40613453-40613502)
chr4 (146-198)||(5775357-5775409)
chr4 (155-199)||(36635331-36635375)
chr4 (160-203)||(8423731-8423774)
chr4 (18-81)||(19312389-19312452)
chr4 (156-203)||(22440609-22440656)
chr4 (154-203)||(16189712-16189761)
chr4 (122-199)||(24613676-24613753)
chr4 (148-200)||(23292987-23293039)
chr4 (171-203)||(34200295-34200327)
chr4 (160-203)||(1747215-1747258)
chr4 (157-200)||(7670690-7670733)
chr4 (148-191)||(10499271-10499314)
chr4 (147-202)||(33950140-33950195)
chr4 (148-199)||(54580024-54580075)
chr4 (148-202)||(847955-848009)
chr4 (147-201)||(11135294-11135348)
chr4 (149-203)||(18513243-18513297)
chr4 (146-196)||(18576036-18576086)
chr4 (106-203)||(22234849-22234947)
chr4 (157-199)||(49652982-49653024)
chr4 (153-203)||(56488516-56488566)
chr4 (154-203)||(3712516-3712565)
chr4 (147-192)||(8402742-8402787)
chr4 (155-200)||(15029771-15029816)
chr4 (155-200)||(15659768-15659813)
chr4 (170-203)||(16184820-16184853)
chr4 (170-203)||(30522938-30522971)
chr4 (170-203)||(38148748-38148781)
chr4 (148-200)||(3947767-3947819)
chr4 (147-199)||(7214522-7214574)
chr4 (154-198)||(24343515-24343559)
chr4 (148-200)||(28964249-28964301)
chr4 (148-200)||(35952618-35952670)
chr4 (148-188)||(44132645-44132685)
[»] chr1 (52 HSPs)
chr1 (107-203)||(27471526-27471622)
chr1 (148-199)||(7918212-7918263)
chr1 (107-199)||(9828051-9828143)
chr1 (148-196)||(25361896-25361944)
chr1 (148-203)||(36878464-36878519)
chr1 (148-202)||(44482234-44482288)
chr1 (149-198)||(1864882-1864931)
chr1 (122-203)||(34371717-34371797)
chr1 (155-203)||(6427353-6427401)
chr1 (107-203)||(9629860-9629956)
chr1 (155-203)||(25098563-25098611)
chr1 (148-200)||(34712384-34712436)
chr1 (155-203)||(36906000-36906048)
chr1 (148-200)||(40181877-40181929)
chr1 (122-201)||(6414977-6415055)
chr1 (148-203)||(9709823-9709878)
chr1 (148-203)||(20157351-20157406)
chr1 (148-203)||(38503323-38503378)
chr1 (149-199)||(10233260-10233310)
chr1 (149-203)||(17754314-17754368)
chr1 (149-203)||(26238115-26238168)
chr1 (154-203)||(398772-398821)
chr1 (170-203)||(2896144-2896177)
chr1 (154-203)||(17831538-17831587)
chr1 (148-200)||(1486710-1486762)
chr1 (147-203)||(2784559-2784615)
chr1 (147-203)||(5898266-5898322)
chr1 (156-200)||(12443469-12443513)
chr1 (156-196)||(19324572-19324612)
chr1 (159-203)||(28674803-28674847)
chr1 (148-199)||(14332643-14332694)
chr1 (148-203)||(21038086-21038141)
chr1 (160-199)||(34298443-34298482)
chr1 (148-203)||(39953147-39953202)
chr1 (162-200)||(1262890-1262928)
chr1 (137-203)||(5376490-5376556)
chr1 (149-199)||(10572591-10572641)
chr1 (170-200)||(31015049-31015079)
chr1 (154-199)||(609465-609510)
chr1 (170-203)||(10475000-10475033)
chr1 (155-200)||(13436464-13436509)
chr1 (29-70)||(15323222-15323263)
chr1 (155-200)||(19562629-19562674)
chr1 (170-203)||(19909300-19909333)
chr1 (170-203)||(40285677-40285710)
chr1 (155-203)||(17425101-17425149)
chr1 (147-203)||(23636049-23636105)
chr1 (148-188)||(30749858-30749898)
chr1 (148-188)||(30771309-30771349)
chr1 (155-199)||(35999330-35999374)
chr1 (148-200)||(38075971-38076023)
chr1 (98-198)||(47989505-47989605)
[»] scaffold0008 (1 HSPs)
scaffold0008 (118-200)||(263343-263425)
[»] chr7 (53 HSPs)
chr7 (126-203)||(19206053-19206130)
chr7 (148-203)||(32308123-32308178)
chr7 (148-200)||(3721099-3721151)
chr7 (148-203)||(5548679-5548734)
chr7 (148-203)||(20549794-20549849)
chr7 (149-203)||(17851434-17851488)
chr7 (98-200)||(26033412-26033514)
chr7 (147-203)||(22484028-22484084)
chr7 (151-199)||(22868049-22868097)
chr7 (147-203)||(23191899-23191955)
chr7 (148-200)||(24146822-24146874)
chr7 (148-203)||(26733307-26733362)
chr7 (155-198)||(35297680-35297723)
chr7 (148-203)||(42720891-42720946)
chr7 (149-203)||(18035866-18035920)
chr7 (98-200)||(24339648-24339750)
chr7 (161-203)||(29787383-29787425)
chr7 (29-95)||(32308160-32308226)
chr7 (148-201)||(9482939-9482992)
chr7 (148-193)||(22602711-22602756)
chr7 (149-198)||(23849460-23849509)
chr7 (161-201)||(2424619-2424659)
chr7 (147-199)||(5835254-5835306)
chr7 (148-200)||(7328692-7328744)
chr7 (148-200)||(19992007-19992059)
chr7 (122-198)||(26329357-26329433)
chr7 (148-199)||(3991331-3991382)
chr7 (148-199)||(10042944-10042995)
chr7 (116-199)||(11665409-11665492)
chr7 (148-199)||(18013075-18013126)
chr7 (148-203)||(32287464-32287519)
chr7 (148-198)||(4909159-4909209)
chr7 (170-200)||(12289120-12289150)
chr7 (161-203)||(14729704-14729746)
chr7 (156-198)||(16341504-16341546)
chr7 (149-203)||(27093415-27093469)
chr7 (149-203)||(27184832-27184886)
chr7 (160-201)||(1401030-1401071)
chr7 (154-199)||(6630919-6630964)
chr7 (147-200)||(11061076-11061129)
chr7 (170-203)||(11722121-11722154)
chr7 (149-198)||(15902830-15902879)
chr7 (148-201)||(21880157-21880210)
chr7 (170-203)||(30731040-30731073)
chr7 (171-200)||(45056925-45056954)
chr7 (139-199)||(2034448-2034508)
chr7 (155-203)||(8160419-8160467)
chr7 (134-198)||(9408321-9408385)
chr7 (148-196)||(9778510-9778558)
chr7 (154-198)||(12278843-12278887)
chr7 (155-195)||(17307904-17307944)
chr7 (154-198)||(18866309-18866353)
chr7 (154-198)||(27732246-27732290)
[»] scaffold0044 (1 HSPs)
scaffold0044 (107-203)||(53183-53279)
[»] chr6 (54 HSPs)
chr6 (148-203)||(7265594-7265649)
chr6 (148-203)||(19040355-19040410)
chr6 (134-203)||(5000613-5000682)
chr6 (148-200)||(7723251-7723303)
chr6 (148-200)||(9025495-9025547)
chr6 (154-203)||(30866151-30866200)
chr6 (149-200)||(7086801-7086852)
chr6 (148-203)||(7377982-7378037)
chr6 (133-200)||(8931588-8931655)
chr6 (148-203)||(9027181-9027236)
chr6 (148-203)||(9617437-9617492)
chr6 (148-203)||(9629386-9629441)
chr6 (149-203)||(9658882-9658936)
chr6 (98-200)||(16766703-16766805)
chr6 (154-200)||(26562695-26562741)
chr6 (154-203)||(6665216-6665265)
chr6 (154-203)||(13851739-13851788)
chr6 (146-199)||(19044471-19044524)
chr6 (148-201)||(34073348-34073401)
chr6 (148-200)||(7996379-7996431)
chr6 (148-200)||(8022370-8022422)
chr6 (154-194)||(11591877-11591917)
chr6 (147-195)||(13360372-13360420)
chr6 (148-200)||(21924936-21924988)
chr6 (155-203)||(32511674-32511722)
chr6 (156-203)||(1532243-1532290)
chr6 (148-199)||(2040598-2040649)
chr6 (148-203)||(5732511-5732566)
chr6 (148-199)||(7801157-7801208)
chr6 (148-199)||(9195755-9195806)
chr6 (148-203)||(10888975-10889030)
chr6 (152-203)||(17341669-17341720)
chr6 (148-203)||(20371111-20371166)
chr6 (148-199)||(31384927-31384978)
chr6 (150-195)||(10339128-10339174)
chr6 (161-203)||(31579239-31579281)
chr6 (148-197)||(7740650-7740699)
chr6 (154-203)||(10842535-10842584)
chr6 (145-198)||(11784214-11784267)
chr6 (155-196)||(17411876-17411917)
chr6 (107-200)||(17435205-17435298)
chr6 (161-198)||(32839660-32839697)
chr6 (148-188)||(4388103-4388143)
chr6 (171-203)||(5462689-5462721)
chr6 (98-198)||(5970059-5970159)
chr6 (155-199)||(7151419-7151463)
chr6 (155-199)||(7248365-7248409)
chr6 (148-196)||(9024177-9024225)
chr6 (95-199)||(9522898-9523002)
chr6 (148-200)||(12696330-12696382)
chr6 (148-192)||(17327656-17327700)
chr6 (155-199)||(20518352-20518396)
chr6 (154-198)||(21142126-21142170)
chr6 (148-200)||(33001290-33001342)
[»] chr5 (38 HSPs)
chr5 (132-203)||(12264814-12264885)
chr5 (148-203)||(3966506-3966561)
chr5 (152-203)||(7175024-7175075)
chr5 (148-203)||(30502389-30502444)
chr5 (148-203)||(30542732-30542787)
chr5 (155-200)||(6471897-6471942)
chr5 (148-199)||(22423813-22423864)
chr5 (125-200)||(25817501-25817576)
chr5 (148-203)||(28588675-28588730)
chr5 (148-203)||(36838546-36838601)
chr5 (147-201)||(12927659-12927713)
chr5 (154-200)||(41091264-41091310)
chr5 (154-203)||(27144466-27144515)
chr5 (134-199)||(40131628-40131693)
chr5 (155-199)||(3751938-3751982)
chr5 (148-200)||(16203796-16203848)
chr5 (159-203)||(17593734-17593778)
chr5 (148-200)||(39698547-39698599)
chr5 (108-203)||(5467945-5468034)
chr5 (148-203)||(11685942-11685997)
chr5 (147-198)||(23287349-23287400)
chr5 (156-195)||(24273039-24273078)
chr5 (156-195)||(24389136-24389175)
chr5 (148-203)||(32630736-32630791)
chr5 (146-196)||(14873527-14873577)
chr5 (149-203)||(17123051-17123105)
chr5 (154-196)||(18421848-18421890)
chr5 (18-76)||(32630688-32630746)
chr5 (170-203)||(27932238-27932271)
chr5 (154-203)||(34879353-34879402)
chr5 (158-199)||(35017044-35017085)
chr5 (107-203)||(18592076-18592172)
chr5 (148-200)||(21191057-21191109)
chr5 (154-198)||(23015996-23016040)
chr5 (172-200)||(26716150-26716178)
chr5 (172-200)||(26985890-26985918)
chr5 (171-203)||(30098329-30098361)
chr5 (155-203)||(32766951-32766999)
[»] chr3 (40 HSPs)
chr3 (96-199)||(14209120-14209223)
chr3 (148-203)||(49505155-49505210)
chr3 (107-203)||(8039795-8039891)
chr3 (148-203)||(7928453-7928508)
chr3 (157-201)||(1438809-1438853)
chr3 (148-200)||(11313801-11313853)
chr3 (148-200)||(45451559-45451611)
chr3 (148-203)||(8383260-8383315)
chr3 (148-198)||(7614416-7614466)
chr3 (148-198)||(26290379-26290429)
chr3 (154-203)||(10690269-10690318)
chr3 (154-203)||(32804547-32804596)
chr3 (154-203)||(34307787-34307836)
chr3 (148-196)||(8789551-8789599)
chr3 (155-203)||(15544696-15544744)
chr3 (155-203)||(16192758-16192806)
chr3 (148-203)||(1550143-1550198)
chr3 (161-200)||(11251984-11252023)
chr3 (122-201)||(11665949-11666028)
chr3 (147-194)||(13807181-13807228)
chr3 (147-198)||(20691327-20691378)
chr3 (148-203)||(38731221-38731276)
chr3 (161-203)||(3618884-3618926)
chr3 (158-200)||(9624647-9624689)
chr3 (157-199)||(12704014-12704056)
chr3 (162-200)||(21257001-21257039)
chr3 (148-198)||(25093510-25093560)
chr3 (158-199)||(11493372-11493413)
chr3 (107-200)||(14832105-14832198)
chr3 (155-200)||(25948895-25948940)
chr3 (154-199)||(29508451-29508496)
chr3 (126-199)||(34910324-34910397)
chr3 (171-203)||(5407271-5407303)
chr3 (171-203)||(5441055-5441087)
chr3 (154-198)||(11658823-11658867)
chr3 (147-203)||(13620764-13620820)
chr3 (158-202)||(15812832-15812876)
chr3 (148-200)||(28678309-28678361)
chr3 (148-200)||(28918007-28918059)
chr3 (148-203)||(40993336-40993392)
[»] chr8 (37 HSPs)
chr8 (154-203)||(34897088-34897137)
chr8 (148-200)||(3025557-3025609)
chr8 (148-203)||(24362203-24362258)
chr8 (148-200)||(13844597-13844649)
chr8 (147-199)||(14134706-14134758)
chr8 (157-200)||(29776042-29776085)
chr8 (156-203)||(39954288-39954335)
chr8 (157-203)||(4611537-4611583)
chr8 (148-198)||(4786339-4786389)
chr8 (148-198)||(11927087-11927137)
chr8 (98-200)||(29510255-29510357)
chr8 (159-197)||(30133121-30133159)
chr8 (154-200)||(31236584-31236630)
chr8 (147-200)||(12606829-12606882)
chr8 (155-200)||(14731718-14731763)
chr8 (170-203)||(18067957-18067990)
chr8 (107-200)||(22651982-22652075)
chr8 (146-203)||(33382018-33382075)
chr8 (154-198)||(8798838-8798882)
chr8 (147-199)||(20679395-20679447)
chr8 (155-198)||(11803267-11803310)
chr8 (148-203)||(31109519-31109574)
chr8 (149-199)||(7658470-7658520)
chr8 (98-200)||(8343322-8343424)
chr8 (148-198)||(11944673-11944723)
chr8 (154-200)||(27213553-27213599)
chr8 (148-198)||(33405385-33405435)
chr8 (161-203)||(37283824-37283866)
chr8 (154-203)||(20785472-20785521)
chr8 (159-199)||(13203648-13203688)
chr8 (171-203)||(18069155-18069187)
chr8 (148-200)||(25566847-25566899)
chr8 (148-188)||(26902176-26902216)
chr8 (171-199)||(29447134-29447162)
chr8 (148-200)||(35519808-35519860)
chr8 (155-203)||(36934673-36934721)
chr8 (149-197)||(40332200-40332248)
[»] scaffold0036 (1 HSPs)
scaffold0036 (107-199)||(9707-9799)
[»] scaffold0024 (1 HSPs)
scaffold0024 (137-203)||(68232-68298)
[»] scaffold0123 (1 HSPs)
scaffold0123 (154-203)||(44532-44581)
[»] scaffold0020 (1 HSPs)
scaffold0020 (148-200)||(135313-135365)
[»] scaffold1528 (1 HSPs)
scaffold1528 (149-203)||(1038-1092)
[»] scaffold0223 (1 HSPs)
scaffold0223 (148-200)||(20178-20230)
[»] scaffold0168 (1 HSPs)
scaffold0168 (154-198)||(21051-21095)
[»] scaffold0004 (1 HSPs)
scaffold0004 (151-203)||(92810-92862)
[»] scaffold0306 (1 HSPs)
scaffold0306 (170-199)||(13407-13436)
[»] scaffold0152 (1 HSPs)
scaffold0152 (170-199)||(21891-21920)
[»] scaffold0122 (1 HSPs)
scaffold0122 (134-199)||(8673-8738)
[»] scaffold0049 (1 HSPs)
scaffold0049 (170-203)||(63776-63809)
[»] scaffold0136 (1 HSPs)
scaffold0136 (98-198)||(3800-3900)
[»] scaffold0085 (1 HSPs)
scaffold0085 (171-199)||(26400-26428)
[»] scaffold0022 (1 HSPs)
scaffold0022 (154-198)||(90851-90895)


Alignment Details
Target: chr2 (Bit Score: 63; Significance: 1e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 19980781 - 19980687
Alignment:
Q  18 acacttctcaaattagatgtgtctcgatgtcggacacgtgtcatatccaacacagacacgacactcacacatataattttggattgggtgtgtcc 112  Q
    |||||||||  ||||| ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||||    
T  19980781 acacttctcggattaggtgtgtctcgatgtcggacatgtgtcatatccggcacagacacgacactcacacatataatttcggattaggtgtgtcc 19980687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 44860422 - 44860323
Alignment:
Q  104 ggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||| |||| |||| | ||  ||| | | | ||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  44860422 ggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggt 44860323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 2423938 - 2423874
Alignment:
Q  137 gacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||||||| ||||||    
T  2423938 gacatcgatacgacactgactcatataattatactaaattatatgattttctcaaatttttagcg 2423874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 21616813 - 21616765
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggt 21616765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 31808134 - 31808080
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||  ||||||||||||||||| | ||||||||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggt 31808080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 23718078 - 23718029
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  23718078 gacacatataattacactgaattatgtgactttctcaaattattagcggt 23718029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 24105750 - 24105701
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  24105750 gacacatataattacactgaattatgtgactttctcaaattattagcggt 24105701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 27286253 - 27286346
Alignment:
Q  108 tgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||||| ||||| ||| ||||| | || |||||||| |||||| |||||| ||||||||  || ||||||||||| || ||||||||||||||    
T  27286253 tgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattagcg 27286346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 37411251 - 37411300
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  37411251 gacacatataatcacactgaattatgtgattttctcaaattattagcggt 37411300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 5891727 - 5891791
Alignment:
Q  18 acacttctcaaattagatgtgtctcgatgtcggacacgtgtcatatccaacacagacacgacact 82  Q
    |||||||| |||||||| ||||||||||||| |||||||||| | || ||||| |||||||||||    
T  5891727 acacttcttaaattagacgtgtctcgatgtctgacacgtgtcgtgtcaaacaccgacacgacact 5891791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 18276580 - 18276524
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| |||||| |||||||  |||||||| |||||||||||||||||||||||||    
T  18276580 tgacaccgacacacataattacactgaattaagtgattttctcaaattattagcggt 18276524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 5367250 - 5367199
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| ||||||||||||||  |||||||||||||||| |||||||||||||    
T  5367250 gacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 34691806 - 34691861
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||||| ||||||| ||||||||||||||||    
T  34691806 gacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 34714218 - 34714273
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||||| ||||||| ||||||||||||||||    
T  34714218 gacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 18889592 - 18889646
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcgg 202  Q
    ||||| ||||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 28677958 - 28677912
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggt 28677912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 32199141 - 32199191
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||| |||||||||||| || |||||||||||||| |||||||||||    
T  32199141 gacactgatacatataattatacttaattatgtgattttatcaaattatta 32199191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 35449567 - 35449521
Alignment:
Q  152 ctgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||    
T  35449567 ctgacacatataattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 18420402 - 18420487
Alignment:
Q  115 atgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||| |||||| || ||||| || |  |||| ||||| |||||||    ||||||||||||||||||||||||||||||    
T  18420402 atgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagc 18420487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 38355884 - 38355933
Alignment:
Q  144 atatgacactgacacatataattatgctgaattatgtgattttctcaaat 193  Q
    ||||||||| |||||||||||| |  ||||||||||||||||||||||||    
T  38355884 atatgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 44860437 - 44860360
Alignment:
Q  18 acacttctcaaattagatgtgtctcgatgtcggacacgtgtcatatccaacacagacacgacactcacacatataatt 95  Q
    ||||| ||| |||||| |||||| ||||||||||||| |||| | ||||||||  |||||||||  ||||||||||||    
T  44860437 acactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataatt 44860360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 30717499 - 30717583
Alignment:
Q  116 tgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||| | || |||| ||| | ||||  ||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  30717499 tgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 32749785 - 32749869
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaa 191  Q
    |||||||  ||||| |||| |||||  || |||||||| | ||||||||||| ||| ||||  ||||||||||||||||||||||    
T  32749785 gtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 17776646 - 17776595
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||||||||||||||||  |||| ||||||| |||||| |||||||||    
T  17776646 tgacactgacacatataattacactgacttatgtggttttcttaaattatta 17776595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 18571030 - 18570975
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||| ||||   |||||||||| ||||||||||||||||| ||||    
T  18571030 gacactgacacatatgattacattgaattatgtcattttctcaaattattatcggt 18570975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 21782832 - 21782871
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagc 21782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 42832277 - 42832332
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||| ||||||||  ||||| ||||| ||||||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggt 42832332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 1328023 - 1327981
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| ||||||| | ||||||||||||||||||||||||    
T  1328023 ataattatactgaattttatgattttctcaaattattagcggt 1327981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 23406926 - 23406876
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||| ||| ||||| ||||||||||| ||||||| |||||||||    
T  23406926 gacactgacacctatgattattctgaattatgtaattttcttaaattatta 23406876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 39279732 - 39279678
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| ||||||||||||||  ||||||||| ||||||||||| ||||||| ||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggt 39279678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 29970556 - 29970605
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| ||||  ||||| |||| |||||||||||||||||||||||    
T  29970556 gacacatatgattacactgaactatgcgattttctcaaattattagcggt 29970605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 2331830 - 2331802
Alignment:
Q  170 ctgaattatgtgattttctcaaattatta 198  Q
    |||||||||||||||||||||||||||||    
T  2331830 ctgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 13204083 - 13204035
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    |||||||||||||||| ||||  | |||||||| |||||||||||||||    
T  13204083 gacactgacacatatagttatattaaattatgtaattttctcaaattat 13204035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 15909633 - 15909677
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaa 192  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||    
T  15909633 gacactgtcacatataattacactgaattatgtaattttctcaaa 15909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 20242728 - 20242768
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttct 188  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  20242728 gacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 21091782 - 21091726
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||| | ||||||  ||||| ||||| ||||||| ||||||||||||||    
T  21091782 tgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggt 21091726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 27447015 - 27447063
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    |||||||||||| |||||||  |||||||||| ||| ||||||||||||    
T  27447015 gacactgacacaaataattacactgaattatgggatcttctcaaattat 27447063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 30527602 - 30527646
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||  || |||||| |||||||||||||||||||    
T  30527602 gacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 41942152 - 41942108
Alignment:
Q  159 atataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||| ||||||||||| ||||||||||||| ||| ||||    
T  41942152 atataattatactgaattatgtaattttctcaaatttttaacggt 41942108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 30982826 - 30982934
Alignment:
Q  95 tttggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaatt 194  Q
    |||||||| || |||||||| ||||| ||||||||| | ||||||| ||| | ||||| ||||| ||||||||  ||||| ||||||||||||||||||     
T  30982826 tttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatc 30982925  T
Q  195 attagcggt 203  Q
    |||||||||    
T  30982926 attagcggt 30982934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 904032 - 903925
Alignment:
Q  96 ttggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaatta 195  Q
    ||||||| | ||||||||  ||||| |||| |||| | ||  ||| ||||| || ||||| |||||||||||  ||||||||||||||||||||||||||    
T  904032 ttggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaatta 903933  T
Q  196 ttagcggt 203  Q
    ||| ||||    
T  903932 ttaacggt 903925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 35723374 - 35723441
Alignment:
Q  137 gacatcgatatgacactgacacatataattatgctgaattatgtg-attttctcaaattattagcggt 203  Q
    |||| ||||| ||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  35723374 gacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggt 35723441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 9996899 - 9996849
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  9996899 tgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 40613502 - 40613453
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  40613502 gacacatataattacactgaattatgtgattttctcaaaatattagcggt 40613453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 5775357 - 5775409
Alignment:
Q  146 atgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||| ||||||||||||||  || ||||||||||||||||||||||||||    
T  5775357 atgacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 36635375 - 36635331
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 8423731 - 8423774
Alignment:
Q  160 tataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggt 8423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 19312452 - 19312389
Alignment:
Q  18 acacttctcaaattagatgtgtctcgatgtcggacacgtgtcatatccaacacagacacgacac 81  Q
    |||||||||| |||||| |||||||| ||||||||||||||| ||||| |||  ||||||||||    
T  19312452 acacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacac 19312389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 22440609 - 22440656
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggt 22440656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 16189761 - 16189712
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  16189761 gacacacataattacactgaattatgtgattttctcaaatttttagcggt 16189712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 24613676 - 24613753
Alignment:
Q  122 acacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||| | ||||||| ||| ||||||| ||||| | || |||   |||||||||||||||||||||||||||||    
T  24613676 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattag 24613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 23292987 - 23293039
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| | ||||||| ||||||||||||||||| |||||||||||||    
T  23292987 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagc 23293039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 34200295 - 34200327
Alignment:
Q  171 tgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||||||||||||    
T  34200295 tgaattatgtgattttctcaaattattagcggt 34200327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 1747258 - 1747215
Alignment:
Q  160 tataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  1747258 tataattaaactgaattatgtgattttctcaatttattagcggt 1747215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 7670733 - 7670690
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||    
T  7670733 acatatagttatactgaattatgtgattttctcaaactattagc 7670690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 10499271 - 10499314
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaa 191  Q
    ||||||||||||||||||||  || |||||||||||||||||||    
T  10499271 gacactgacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 33950195 - 33950140
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcgg 202  Q
    |||||| ||||||||| ||||   | ||||||||||||||||||||||||||||||    
T  33950195 tgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 54580024 - 54580075
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| ||||| ||||||||  ||||||||||||||||| ||||||||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 848009 - 847955
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcgg 202  Q
    ||||| ||||| | |||||||  |||||||||| |||||||||||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcgg 847955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 11135294 - 11135348
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||| |||||||| |||||||  |||||||||| ||||||||||| ||||||||    
T  11135294 tgacagtgacacatgtaattatattgaattatgtaattttctcaaactattagcg 11135348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 18513243 - 18513297
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||| ||||   |||||||||| ||||||||||||||||| ||||    
T  18513243 acactgacacatatgattacattgaattatgtcattttctcaaattattatcggt 18513297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 18576036 - 18576086
Alignment:
Q  146 atgacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    |||||||  |||||||||||||  | |||||||||||||||||||||||||    
T  18576036 atgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 22234849 - 22234947
Alignment:
Q  106 tgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtga-ttttctcaaattattagcggt 203  Q
    ||||||| | ||||| ||||||||| | || |||| ||| | ||||| |||||||| |||||  ||||||||||||| |||| ||||||| ||||||||    
T  22234849 tgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggt 22234947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 49652982 - 49653024
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||    
T  49652982 acatataattatactgaattatctgattttcttaaattattag 49653024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 56488516 - 56488566
Alignment:
Q  153 tgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||| ||||  ||||||||| ||||||||||||||| ||||||||    
T  56488516 tgacacatatgattaccctgaattatatgattttctcaaattgttagcggt 56488566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 3712516 - 3712565
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||   |||||||  ||||||||||||||||||||||||    
T  3712516 gacacatataattacattgaattacatgattttctcaaattattagcggt 3712565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 8402742 - 8402787
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaa 192  Q
    ||||||||| |||||||||||  ||||||||| |||||||||||||    
T  8402742 tgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 15029816 - 15029771
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||  |||||||||||||| || |||||||||||||    
T  15029816 acacatataattacactgaattatgtgatattttcaaattattagc 15029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 15659768 - 15659813
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||  | |||||||| ||||||||||||||||||||    
T  15659768 acacatataattacaccgaattatgagattttctcaaattattagc 15659813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 16184853 - 16184820
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||| ||||||||||||||||||||||||||    
T  16184853 ctgaattgtgtgattttctcaaattattagcggt 16184820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 30522938 - 30522971
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||| |||||||||    
T  30522938 ctgaattatgtgattttctcaaataattagcggt 30522971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 38148748 - 38148781
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||||| ||||||||||    
T  38148748 ctgaattatgtgattttctcaaactattagcggt 38148781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 3947767 - 3947819
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||| | ||||||  |||||||||| |||||| |||||||||||||    
T  3947767 gacactgacacttgtaattacactgaattatgcgattttttcaaattattagc 3947819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 7214522 - 7214574
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||| ||| ||||||||||   | |||||||||||||||||||||||||||    
T  7214522 tgacaccgacgcatataattacattaaattatgtgattttctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 24343559 - 24343515
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||    
T  24343559 gacacctataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 28964249 - 28964301
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  28964249 gacacagacacttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 35952618 - 35952670
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||| |||||||||||   |||||||| ||||||| |||||||||||||    
T  35952618 gacactgatacatataattacattgaattatatgattttatcaaattattagc 35952670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 44132645 - 44132685
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttct 188  Q
    ||||| ||||||||||||||| |||||||| ||||||||||    
T  44132645 gacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 27471526 - 27471622
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| ||||| ||||||||| ||||  ||| |||||||||||  |||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  27471526 gtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 7918212 - 7918263
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 9828143 - 9828051
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||| ||||| ||||||||| | |||||||  || | ||||| |||||||| |||||  ||||||||||||||||| ||||||||||||    
T  9828143 gtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 25361944 - 25361896
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 36878519 - 36878464
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggt 36878464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 44482288 - 44482234
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcgg 202  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 1864882 - 1864931
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 34371797 - 34371717
Alignment:
Q  122 acacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| |||| |||| | | | ||||| ||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  34371797 acacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggt 34371717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 6427401 - 6427353
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||    
T  6427401 acacatataattacattgaattatgtgattttctcaaattattagcggt 6427353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 9629860 - 9629956
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| ||||| ||| ||||| | || |||||||| | ||||| ||||| |||||| |  ||||||||| ||||||| ||||||||||||||||    
T  9629860 gtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggt 9629956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 25098563 - 25098611
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggt 25098611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 34712384 - 34712436
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 36906048 - 36906000
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  36906048 acacatataattactctgaattatgtgattttctcagattattagcggt 36906000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 40181929 - 40181877
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||||||||    
T  40181929 gacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 6414977 - 6415055
Alignment:
Q  122 acacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||||||| | || |||||||| ||||||| ||||||| ||||||  ||| |||||||||||||||||||| |||||||    
T  6414977 acacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcg 6415055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9709878 - 9709823
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||    ||||||||||||||||||||||||||||||||    
T  9709878 gacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggt 9709823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 20157351 - 20157406
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||| ||||||||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttctcacattattagcggt 20157406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 38503378 - 38503323
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggt 38503323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 10233310 - 10233260
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||| ||||||||||||||  |||||||||||||||||||||| |||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 17754368 - 17754314
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||| |||  ||||||||||| ||||| ||||||||||||||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggt 17754314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 26238115 - 26238168
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||| |||  ||||||||||| ||||||||||||||||||||||    
T  26238115 acactgacacatata-ttacactgaattatgttattttctcaaattattagcggt 26238168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 398772 - 398821
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||  ||||||||||||||||| ||||||||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggt 398821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 2896144 - 2896177
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||||||||||||||||    
T  2896144 ctgaattatgtgattttctcaaattattagcggt 2896177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 17831538 - 17831587
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| ||||  |||||| |||||||||||||||||||||||||||    
T  17831538 gacacatatgattacactgaataatgtgattttctcaaattattagcggt 17831587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 1486710 - 1486762
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| ||||||||  ||||||||||||||||| |||||||||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattttttcaaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 2784615 - 2784559
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| ||||||||||||||| || |||||||||||||||| ||||| ||| ||||    
T  2784615 tgacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggt 2784559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 5898266 - 5898322
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| ||| ||||||||||  ||||||||||||||||| ||| ||||||||||||    
T  5898266 tgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggt 5898322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 12443469 - 12443513
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||| |||||  |||||||||||||||||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagc 12443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 28674847 - 28674803
Alignment:
Q  159 atataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||    
T  28674847 atataattatactgaattatgtaattttctcaaattattaacggt 28674803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 14332643 - 14332694
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| || |||||||||||  || |||||||||||||||||||||||||||    
T  14332643 gacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 21038141 - 21038086
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| ||||| ||||  ||||||||||| ||||||| ||||||||||||||    
T  21038141 gacactgacgcatatgattacactgaattatgtaattttcttaaattattagcggt 21038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 34298482 - 34298443
Alignment:
Q  160 tataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 39953147 - 39953202
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| |||||||| |||||  || |||||||||||||||| ||||||||||||||    
T  39953147 gacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggt 39953202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 1262928 - 1262890
Alignment:
Q  162 taattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagc 1262890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 5376490 - 5376556
Alignment:
Q  137 gacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| | ||||| ||||| | ||||||  ||||||||||| ||||||| ||||||||||||||    
T  5376490 gacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggt 5376556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 10572591 - 10572641
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||| ||||||| ||||||  | ||||||||||||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattag 10572641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 31015079 - 31015049
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||||||||||||||||||||    
T  31015079 ctgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 609465 - 609510
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||| |||| |||||| |||||||||| ||||||||||||||||||    
T  609465 gacatatatgattatgttgaattatgtaattttctcaaattattag 609510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 10475000 - 10475033
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||| |||||||||||    
T  10475000 ctgaattatgtgattttctcaagttattagcggt 10475033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 13436509 - 13436464
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||  |||||||||||||||| || |||||||||||    
T  13436509 acacatataattacactgaattatgtgatttccttaaattattagc 13436464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 15323263 - 15323222
Alignment:
Q  29 attagatgtgtctcgatgtcggacacgtgtcatatccaacac 70  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||    
T  15323263 attaggtgtgtttcggtgtcggacacgtgtcatatccaacac 15323222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 19562629 - 19562674
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||  ||||| |||| ||||||||||||||||||||    
T  19562629 acacatataattacactgaactatgagattttctcaaattattagc 19562674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 19909333 - 19909300
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| |||||||||||||||||||||||||||||    
T  19909333 ctgagttatgtgattttctcaaattattagcggt 19909300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 40285677 - 40285710
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||| |||||||||||||||||||||||    
T  40285677 ctgaattatgcgattttctcaaattattagcggt 40285710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 17425101 - 17425149
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||   |||||||||||||||| ||||||||||| ||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattattatcggt 17425149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 23636049 - 23636105
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| |||||||| |||||  ||||||||||| ||||||||||||| || |||||    
T  23636049 tgacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggt 23636105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 30749898 - 30749858
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttct 188  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 30771349 - 30771309
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttct 188  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 35999330 - 35999374
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||| || |||||| ||||||||| ||||||||||    
T  35999330 acacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 38075971 - 38076023
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||| ||||  |||| ||||||||||| ||||||||||||||    
T  38075971 gacaccgacacatatgattacactgacttatgtgatttactcaaattattagc 38076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 47989605 - 47989505
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| || |||||||||||||  ||| ||||| | || |||| ||| | ||||| ||||| | ||||||  ||||||||||||||||| | ||||||||    
T  47989605 ggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 47989506  T
Q  198 a 198  Q
    |    
T  47989505 a 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 263343 - 263425
Alignment:
Q  118 tcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||| | ||||||| ||| | ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||    
T  263343 tcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagc 263425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 19206130 - 19206053
Alignment:
Q  126 gtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||| ||||||| | | | ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  19206130 gtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattattagcggt 19206053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 32308178 - 32308123
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttctcaaattattagcggt 32308123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 3721151 - 3721099
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 5548734 - 5548679
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaattatcagcggt 5548679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 20549849 - 20549794
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  20549849 gacaccgacacatataattacactgaattacgtgattttctcaaattattagcggt 20549794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 17851488 - 17851434
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 26033412 - 26033514
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| |||||||| || | ||| ||||||||||| ||||||| ||| | || || ||||| | ||||||  ||||||||||||||||| ||||||||||    
T  26033412 ggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattatt 26033511  T
Q  198 agc 200  Q
    |||    
T  26033512 agc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 22484084 - 22484028
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| ||||||||||||||| ||||||||||  ||||||| ||||||||||||||    
T  22484084 tgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggt 22484028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 22868097 - 22868049
Alignment:
Q  151 actgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  22868097 actgacacatataattacactgaattatgtgattttctcatattattag 22868049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 23191955 - 23191899
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| |||| ||||||  ||||| ||||||||||||||||||||||||||||    
T  23191955 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggt 23191899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 24146874 - 24146822
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| |||||||||||||||  |||||||||||||||||| |||||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattattagc 24146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 26733362 - 26733307
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||| ||||||  ||||||||||||||||| ||||||||||||||||    
T  26733362 gacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggt 26733307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 35297680 - 35297723
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  35297680 acacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 42720891 - 42720946
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||   | |||||||||||||| ||||||||||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggt 42720946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 18035866 - 18035920
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||| |||||| ||||||||||||||||| || ||||||| ||||||    
T  18035866 acactgacacatgtaattacgctgaattatgtgatttcctaaaattatcagcggt 18035920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 24339750 - 24339648
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| || |||||||| ||||| | ||||||| | || |||| ||| | ||||| ||||| | ||||||  ||||||||||||||||| ||||||||||    
T  24339750 ggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 24339651  T
Q  198 agc 200  Q
    |||    
T  24339650 agc 24339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 29787383 - 29787425
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggt 29787425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 32308226 - 32308160
Alignment:
Q  29 attagatgtgtctcgatgtcggacacgtgtcatatccaacacagacacgacactcacacatataatt 95  Q
    ||||| ||||||||| ||||||||| ||||| | |||||||| ||||||||||| ||||||| ||||    
T  32308226 attagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaatt 32308160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 9482992 - 9482939
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||| ||||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 22602711 - 22602756
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaat 193  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 23849460 - 23849509
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||| ||||||||||||||| |||||||||||| |||||| |||||||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttcttaaattatta 23849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 5835306 - 5835254
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||| ||||||||||||||  ||||||||||| ||||||||||| ||||||    
T  5835306 tgacaccgacacatataattacactgaattatgttattttctcaaactattag 5835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 7328692 - 7328744
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||  || |||||||| |||||||||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 19992059 - 19992007
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| ||||||||  ||||| |||||||||||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaattattagc 19992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 26329357 - 26329433
Alignment:
Q  122 acacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||| | ||||||| ||| | ||| | ||||||||||||||  ||||||| |||| ||||||||||||||||    
T  26329357 acacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 3991382 - 3991331
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| ||||| | ||||||| ||||||||||||||||| ||||||||||||    
T  3991382 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattag 3991331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 10042995 - 10042944
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||| |||||||| ||| |||||||||| ||| ||||||||||||    
T  10042995 gacactgacacttataattacgctaaattatgtgaatttatcaaattattag 10042944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 11665409 - 11665492
Alignment:
Q  116 tgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| ||||||||| | |  |||| ||| ||||||  ||||| ||||||||  ||||||||||||||||| ||||||||||||    
T  11665409 tgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 18013075 - 18013126
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  18013075 gacactgacacatataattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 32287464 - 32287519
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| |||||||||| ||   ||||||||||||||||||||| ||||||||||||    
T  32287464 gacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggt 32287519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 4909209 - 4909159
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||| ||||   |||||||||| |||||||||||||||||    
T  4909209 gacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 12289150 - 12289120
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||||||||||||||||||||    
T  12289150 ctgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 14729746 - 14729704
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||  |||||||| |||||||||||||||||||||||||    
T  14729746 ataattacactgaattacgtgattttctcaaattattagcggt 14729704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 16341546 - 16341504
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||  || ||||||||||||||||||||||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 27093415 - 27093469
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| ||| ||||||||||  || |||||||||||||||| ||||||||||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggt 27093469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 27184886 - 27184832
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| ||| ||||||||||  || |||||||||||||||| ||||||||||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggt 27184832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 1401071 - 1401030
Alignment:
Q  160 tataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||||||  ||||||||||||| ||||||||||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 6630919 - 6630964
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||||  |||||||| |||| ||||||||||||||||    
T  6630919 gacacatataattacactgaattaagtgactttctcaaattattag 6630964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 11061076 - 11061129
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||| ||||| | ||||||| || |||||||||||||| |||||||||||||    
T  11061076 tgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagc 11061129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 11722121 - 11722154
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||||||| ||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggt 11722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 15902879 - 15902830
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||| ||||||||||||||  || |||||||||||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 21880210 - 21880157
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||| ||||| | ||||||  ||||||||||| ||||||||||||||||||||    
T  21880210 gacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 30731073 - 30731040
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||||||| |||||    
T  30731073 ctgaattatgtgattttctcaaattattcgcggt 30731040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 45056925 - 45056954
Alignment:
Q  171 tgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||||||||||||||||||    
T  45056925 tgaattatgtgattttctcaaattattagc 45056954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 2034508 - 2034448
Alignment:
Q  139 catcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||| ||||||||||||||||  ||  || |||||| |||| |||||||||||||||    
T  2034508 catcgatacgacactgacacatatatatacactaaattatatgatattctcaaattattag 2034448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 8160467 - 8160419
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||  || |||||||| ||||||| ||||||||||||||    
T  8160467 acacatataattacactaaattatgtaattttcttaaattattagcggt 8160419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 9408321 - 9408385
Alignment:
Q  134 tctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||| ||||| ||||| ||||| | ||||||  || |||||||||||||| |||||||||||    
T  9408321 tctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 9778558 - 9778510
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||| ||||| | ||||||| ||||||||||||||||| |||||||||    
T  9778558 gacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 12278887 - 12278843
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||  ||||||||||| ||||||| |||||||||    
T  12278887 gacacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 17307944 - 17307904
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaatta 195  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  17307944 acacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 18866353 - 18866309
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||| |||||||| |||||||| ||||||| |||||||||||    
T  18866353 gacacatttaattatgttgaattatttgattttgtcaaattatta 18866309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 27732246 - 27732290
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||  ||||||||||| ||||||| |||||||||    
T  27732246 gacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 53279 - 53183
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| ||||| ||||||||||| || |||| ||| | | ||| ||||| ||||||||  |||||||||||||||||||||||||||| |||||    
T  53279 gtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggt 53183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 7265594 - 7265649
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  7265594 gacaccgacacatataattacactgaattatgtgattttctcaaattattagcggt 7265649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 19040410 - 19040355
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattattagcggt 19040355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 5000613 - 5000682
Alignment:
Q  134 tctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||| ||| |||||||||||| ||| |||||| |||||| ||||||||||||| |||||||||||||    
T  5000613 tctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 5000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 7723251 - 7723303
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  7723251 gacaccgatacatataattatgctgaattatatgattttctcaaattattagc 7723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 9025495 - 9025547
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 30866151 - 30866200
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||    
T  30866151 gacacatataattacattgaattatgtgattttctcaaattattagcggt 30866200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 7086852 - 7086801
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 7378037 - 7377982
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||   |||||||||||||||||||||||| ||||||||    
T  7378037 gacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggt 7377982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 8931588 - 8931655
Alignment:
Q  133 atctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||| ||| | ||||  ||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  8931588 atctgacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagc 8931655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9027236 - 9027181
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  | ||||||||||||| ||||||||||||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaattattagcggt 9027181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9617492 - 9617437
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||   |||||||||||||||||||||||||||| ||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9629441 - 9629386
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||||||| |||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaattattggcggt 9629386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 9658936 - 9658882
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| |||| |||||||||  ||||||||||||||||||| ||||||||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggt 9658882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 16766805 - 16766703
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| || |||||||| ||||| ||||||||  | || |||| ||| | ||||| ||||| | ||||||  ||||||||||||||||| ||||||||||    
T  16766805 ggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 16766706  T
Q  198 agc 200  Q
    |||    
T  16766705 agc 16766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 26562741 - 26562695
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||    
T  26562741 gacacatataattacactgaattatgtgattttctcaaatttttagc 26562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 6665265 - 6665216
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| |||||||  |||||||||||||||| |||||||||||||||||    
T  6665265 gacacaaataattactctgaattatgtgatttactcaaattattagcggt 6665216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 13851788 - 13851739
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  |||||||| || ||||||||||||||||||||||    
T  13851788 gacacatataattacactgaattacgttattttctcaaattattagcggt 13851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 19044524 - 19044471
Alignment:
Q  146 atgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||| |||||||||||| |  |||||||||||||| |||||||||||||||    
T  19044524 atgacaccgacacatataataacactgaattatgtgatattctcaaattattag 19044471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 34073348 - 34073401
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||| ||| ||||||||||  |||||||||| |||||||||||||||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttctcaaattattagcg 34073401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 7996379 - 7996431
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||| ||||||||||  ||||||||| |||||||||||||||||||||    
T  7996379 gacaccgacgcatataattacactgaattatatgattttctcaaattattagc 7996431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 8022422 - 8022370
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||| ||||||||||  ||||||||| |||||||||||||||||||||    
T  8022422 gacaccgacgcatataattacactgaattatatgattttctcaaattattagc 8022370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 11591877 - 11591917
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaatt 194  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  11591877 gacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 13360372 - 13360420
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaatta 195  Q
    |||||| || |||||||||||  ||||||||||||||||||||||||||    
T  13360372 tgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 21924936 - 21924988
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  21924936 gacaccgacacatataattacactgaattatttgatattctcaaattattagc 21924988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 32511674 - 32511722
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| ||||||||  ||||||||||||||||||| ||||||||||||||    
T  32511674 acacttataattacactgaattatgtgattttcttaaattattagcggt 32511722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 1532290 - 1532243
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||  ||||||||||| ||||| ||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggt 1532243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 2040598 - 2040649
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||| | |||||||| | |||||||| |||||||||||||||||||||    
T  2040598 gacactgatatatataattttactgaattacgtgattttctcaaattattag 2040649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 5732511 - 5732566
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  || || ||||||||||||||||||||||| ||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggt 5732566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 7801157 - 7801208
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| ||||| | |||||| |||||||||||||||||| ||||||||||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 7801208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 9195755 - 9195806
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| ||||||||||||||  || |||||||| ||||||||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 10888975 - 10889030
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| ||||||||||| |  || |||||||||||||| ||||||||||||||||    
T  10888975 gacactaacacatataatcacactaaattatgtgattttatcaaattattagcggt 10889030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 17341669 - 17341720
Alignment:
Q  152 ctgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||| ||||||||  ||||||||||||||||| ||||||||||| ||||    
T  17341669 ctgacacttataattacactgaattatgtgattttatcaaattattaacggt 17341720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 20371111 - 20371166
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| |||||||||||| |   ||| |||||||||||||||||||||||||||||    
T  20371111 gacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggt 20371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 31384978 - 31384927
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||| | ||||||  ||||||||||||||||| ||||||||||||    
T  31384978 gacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 10339128 - 10339174
Alignment:
Q  150 cactgacacatataattatg-ctgaattatgtgattttctcaaatta 195  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||    
T  10339128 cactgacacatataattaacactgaattatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 31579239 - 31579281
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||  ||||||||||||||||||||||||||||| ||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggt 31579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 7740699 - 7740650
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||||||||||||||||||  || |||| |||||||||| |||||||||    
T  7740699 gacactgacacatataattacactcaattttgtgattttcacaaattatt 7740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 10842584 - 10842535
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| ||||  || |||||||||||||| ||||||||||||||||    
T  10842584 gacacatatgattacactaaattatgtgattttttcaaattattagcggt 10842535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 11784214 - 11784267
Alignment:
Q  145 tatgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||| |||| |||||||||  |||| | ||||||||||||||||||||||    
T  11784214 tatgacaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 17411876 - 17411917
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattat 196  Q
    |||||||||||||| ||||||||| ||||||||| |||||||    
T  17411876 acacatataattatactgaattatatgattttcttaaattat 17411917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 17435298 - 17435205
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||  ||||||||||||||| | || |||||||| |  ||||| |||| | ||||||  ||||||||||| ||||| | |||||||||||    
T  17435298 gtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattagc 17435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 32839660 - 32839697
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattatta 32839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 4388143 - 4388103
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttct 188  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  4388143 gacactgacacatataattaccctggattatgtgattttct 4388103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 5462721 - 5462689
Alignment:
Q  171 tgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||||||| ||||    
T  5462721 tgaattatgtgattttctcaaattattaacggt 5462689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 5970059 - 5970159
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    |||||||| |||||||||||||| | | ||||| | || |||| ||| | |||||  |||  | ||||||  ||||||||||||||||| ||||||||||    
T  5970059 ggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattatt 5970158  T
Q  198 a 198  Q
    |    
T  5970159 a 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 7151463 - 7151419
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||  || |||||||||||||| ||||||||||||    
T  7151463 acacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 7248409 - 7248365
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||  |||||||||||||||| |||| ||||||||    
T  7248409 acacatataattaccctgaattatgtgatttcctcagattattag 7248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 9024177 - 9024225
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||||||||||||| ||||   |||||||||| |||||||||||||||    
T  9024177 gacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 9523002 - 9522898
Alignment:
Q  95 tttggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaatt 194  Q
    |||||||| || ||||| || ||||| |||||||||  ||| |||| ||| |  |||| ||||| | ||||||  ||||||||||||||||| | |||||    
T  9523002 tttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaatt 9522903  T
Q  195 attag 199  Q
    |||||    
T  9522902 attag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 12696382 - 12696330
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||| | ||||||  ||||||||||| ||||| |||||||||||||    
T  12696382 gacactgacacttgtaattacactgaattatgtaattttttcaaattattagc 12696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 17327656 - 17327700
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaa 192  Q
    |||||||||||||||| |||  || ||||||||||||||||||||    
T  17327656 gacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 20518396 - 20518352
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||| |||| |||||| ||||||||||||| ||||    
T  20518396 acacatataattatactgatttatgtaattttctcaaattgttag 20518352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 21142170 - 21142126
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||| ||  ||||||||| |||||||||||||||||||    
T  21142170 gacacatataactagactgaattatatgattttctcaaattatta 21142126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 33001290 - 33001342
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||   | |||||||||||||| |||||||||||||    
T  33001290 gacaccgacacatataattacatttaattatgtgattttttcaaattattagc 33001342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 12264814 - 12264885
Alignment:
Q  132 tatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| |||||||||| |||||||||||||||  |||||| |||| |||||||||||| |||||||||    
T  12264814 tatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggt 12264885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 3966561 - 3966506
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggt 3966506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 7175024 - 7175075
Alignment:
Q  152 ctgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  7175024 ctgacacatataattatgccaaattatgtgattttctcaaattattaacggt 7175075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 30502389 - 30502444
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  30502389 gacaccgacacatataattacactgaattaagtgattttctcaaattattagcggt 30502444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 30542732 - 30542787
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  30542732 gacaccgacacatataattacactgaattaagtgattttctcaaattattagcggt 30542787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 6471897 - 6471942
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 22423813 - 22423864
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||| |||| ||||||||||  |||||||||||||||||||||||||||||    
T  22423813 gacaccgacatatataattatattgaattatgtgattttctcaaattattag 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 25817576 - 25817501
Alignment:
Q  125 cgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||| ||||||| ||| |||| ||||||||||||||| || |||||| || ||||||| | |||||||||||    
T  25817576 cgtgtcatgtctgacaccgacatgatactgacacatataatcatactgaatcatatgatttttttaaattattagc 25817501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 28588675 - 28588730
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||| ||||||||  ||||||||||||||||||||||||||||| ||||    
T  28588675 gacaccgacacctataattacactgaattatgtgattttctcaaattattaccggt 28588730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 36838601 - 36838546
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  || |||||||| ||||||||||||||||||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaattattagcggt 36838546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 12927713 - 12927659
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||||||||| |||||||||  || |||||| ||||||||||||||||||||||    
T  12927713 tgacactgacatatataattacactaaattatatgattttctcaaattattagcg 12927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 41091264 - 41091310
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||    
T  41091264 gacacatataattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 27144515 - 27144466
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  || ||||||||||||| |||||||||||||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggt 27144466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 40131693 - 40131628
Alignment:
Q  134 tctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||| ||||| || |  ||||||||  ||||||||||||||||| ||||||||||||    
T  40131693 tctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 3751938 - 3751982
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||| || | |||||||||||||||||||||||||    
T  3751938 acacatataattatacttagttatgtgattttctcaaattattag 3751982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 16203796 - 16203848
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||  || ||||||| ||||||||||||||||||||    
T  16203796 gacaccgacacatataattacactaaattatgagattttctcaaattattagc 16203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 17593734 - 17593778
Alignment:
Q  159 atataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||  |||||||| |||||||||||||||||||||||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 39698599 - 39698547
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  39698599 gacactgacacttgtaattacactgaattatgtgattttttcaaattattagc 39698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 5467945 - 5468034
Alignment:
Q  108 tgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| ||||||||||||| ||| ||||| |||     ||| ||||| ||||||||  ||||||||||||||||| ||||||||||| ||||    
T  5467945 tgtcccgatatcgaacacgtgtcgtatgtgacaccga-----cac-gacacctataattacactgaattatgtgattttatcaaattattatcggt 5468034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 11685997 - 11685942
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  || ||||||| || ||||||||||||||||||||    
T  11685997 gacaccgacacatataattacactaaattatgcgactttctcaaattattagcggt 11685942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 23287349 - 23287400
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||||||||||  |||||||||| ||||||  |||||||||    
T  23287349 tgacactgacacatataattatattgaattatgtcattttcctaaattatta 23287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 24273039 - 24273078
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaatta 195  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 24389175 - 24389136
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaatta 195  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 32630736 - 32630791
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||   |||||||| | ||||||||||||||||| ||||    
T  32630736 gacactgacacatataattacattgaattatataattttctcaaattattatcggt 32630791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 14873577 - 14873527
Alignment:
Q  146 atgacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||||| ||||||||||||||  || ||||||||| ||||||||||||||    
T  14873577 atgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 17123105 - 17123051
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| |||| |||||||| | ||  ||||||||||||||||||||||||||||||    
T  17123105 acaccgacatatataattgtacttgattatgtgattttctcaaattattagcggt 17123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 18421848 - 18421890
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||||||||||||  ||| |||||||||||||||||||||||    
T  18421848 gacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 32630688 - 32630746
Alignment:
Q  18 acacttctcaaattagatgtgtctcgatgtcggacacgtgtcatatccaacacagacac 76  Q
    ||||| ||| |||||| |||||||| |||||||||||||||| ||||| |||| |||||    
T  32630688 acactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacac 32630746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 27932271 - 27932238
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||| ||||||||||||||||||||||    
T  27932271 ctgaattatgtaattttctcaaattattagcggt 27932238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 34879402 - 34879353
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||| ||||  ||||||||| ||||||||||||||| ||||||||    
T  34879402 gacacatattattacactgaattatatgattttctcaaatttttagcggt 34879353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 35017085 - 35017044
Alignment:
Q  158 catataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||  || |||||||||||||||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 18592172 - 18592076
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||  ||||||||  | || |||| ||| | ||||| | ||||||||||||   |||||||||| ||||||| ||| ||||||||||    
T  18592172 gtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggt 18592076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 21191057 - 21191109
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 21191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 23015996 - 23016040
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||  |||||||||||||||||||||||| ||||    
T  23015996 gacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 26716178 - 26716150
Alignment:
Q  172 gaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||||||||||||||||||    
T  26716178 gaattatgtgattttctcaaattattagc 26716150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 26985918 - 26985890
Alignment:
Q  172 gaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||||||||||||||||||    
T  26985918 gaattatgtgattttctcaaattattagc 26985890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 30098361 - 30098329
Alignment:
Q  171 tgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||||||| ||||    
T  30098361 tgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 32766951 - 32766999
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||   |||||| || |||||||||||||||||||||||    
T  32766951 acacatataattacattgaattgtgcgattttctcaaattattagcggt 32766999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 14209223 - 14209120
Alignment:
Q  96 ttggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaatta 195  Q
    ||||||| ||||| ||||||||||| ||||||||| | || |||| ||| | ||||||||||| | ||||||  ||||||||||||||||| | ||||||    
T  14209223 ttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaatta 14209124  T
Q  196 ttag 199  Q
    ||||    
T  14209123 ttag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 49505155 - 49505210
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 8039795 - 8039891
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| ||||| ||| || |||| || |||| ||| | ||||| ||||||||||||||  ||||||||| | ||||||||||||||||||||||    
T  8039795 gtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggt 8039891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 7928508 - 7928453
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattattagcggt 7928453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 1438853 - 1438809
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcg 1438809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 11313801 - 11313853
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||| |||||||||||||  || ||||||||||||||||||||||||||||    
T  11313801 gacactaacacatataattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 45451611 - 45451559
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  45451611 gacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 8383315 - 8383260
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||| ||||||||  ||||||||| ||||||||||||||||||||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttctcaaattattagcggt 8383260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 7614416 - 7614466
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| |||| |||||||||| ||||||||||||||||||| |||||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaattatta 7614466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 26290429 - 26290379
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||||||||    
T  26290429 gacactgacacatataattaaaccgaactatgtgattttctcaaattatta 26290379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 10690269 - 10690318
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| |||||||||  ||||||||||||||||||||| ||||||||||||    
T  10690269 gacaaatataattacactgaattatgtgattttctcagattattagcggt 10690318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 32804547 - 32804596
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  || |||||||||||||||||||||||||| ||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggt 32804596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 34307787 - 34307836
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||  ||||| ||||||||||||||||||||||||||||    
T  34307787 gacacttataattacactgaaatatgtgattttctcaaattattagcggt 34307836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 8789551 - 8789599
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattat 196  Q
    ||||| ||||||||||||||  | |||||||||||||||||||||||||    
T  8789551 gacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 15544744 - 15544696
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  15544744 acacacataattatacagaattatgtgattttatcaaattattagcggt 15544696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 16192758 - 16192806
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| ||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggt 16192806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 1550198 - 1550143
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||| ||||||||  ||||||  ||||||||| ||||||||||||||||    
T  1550198 gacactgacacctataattacactgaatagtgtgattttttcaaattattagcggt 1550143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 11252023 - 11251984
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 11666028 - 11665949
Alignment:
Q  122 acacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcg 201  Q
    ||||||||| | ||| ||||| | | ||||| ||||||||||||||  || |||| ||||||||| ||||||||||||||    
T  11666028 acacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcg 11665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 13807228 - 13807181
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaatt 194  Q
    |||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  13807228 tgacaccgacacatattattatattgaattatgtgattttctcaaatt 13807181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 20691378 - 20691327
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||| ||||||||| ||||  ||||||||||| |||||||||||||||||    
T  20691378 tgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 38731276 - 38731221
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||| ||||||||||| ||  ||||||||||||||||| | ||||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 3618926 - 3618884
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||| |||||||||||  ||||||||||||||||||||||    
T  3618926 ataattacgctgaattatggaattttctcaaattattagcggt 3618884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 9624689 - 9624647
Alignment:
Q  158 catataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||   ||||||||||||||||||||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagc 9624647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 12704056 - 12704014
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||  |||||||||||| |||||||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattag 12704014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 21257001 - 21257039
Alignment:
Q  162 taattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  21257001 taattatactgaattatgtgattttttcaaattattagc 21257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 25093560 - 25093510
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||||||||  ||||||| |||||||||||||||| ||||    
T  25093560 gacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 11493372 - 11493413
Alignment:
Q  158 catataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||  ||||||||||||||||||||| ||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattag 11493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 14832198 - 14832105
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||| ||||| ||||||||| | || || | ||| | ||||||||||| | ||||||   ||| |||||||||||| |||||||||||||    
T  14832198 gtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagc 14832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 25948895 - 25948940
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  25948895 acacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 29508496 - 29508451
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  29508496 gacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 34910397 - 34910324
Alignment:
Q  126 gtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    ||||||| || |||| ||||| ||||| ||| | | ||||||  ||||||||||||||||| ||||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 5407271 - 5407303
Alignment:
Q  171 tgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||| ||||||||    
T  5407271 tgaattatgtgattttctcaaatttttagcggt 5407303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 5441055 - 5441087
Alignment:
Q  171 tgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||||||||||| ||||||||    
T  5441055 tgaattatgtgattttctcaaatttttagcggt 5441087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 11658867 - 11658823
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||||||| |  |||||||||| ||||||||||||||||||    
T  11658867 gacacatataatcacactgaattatgcgattttctcaaattatta 11658823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 13620764 - 13620820
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||| ||||||||||| |   |||||| ||||||||||||||||||| |||||||    
T  13620764 tgacacagacacatataactgcactgaatcatgtgattttctcaaattactagcggt 13620820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 15812832 - 15812876
Alignment:
Q  158 catataattatgctgaattatgtgattttctcaaattattagcgg 202  Q
    ||||||||||  |||| ||||||||||||||||||||||| ||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcgg 15812876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 28678361 - 28678309
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| |||||||| |||||| || |||||||||||||| | |||||||||||    
T  28678361 gacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 28918059 - 28918007
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 40993336 - 40993392
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtga-ttttctcaaattattagcggt 203  Q
    ||||| ||||||||||||||  ||||||||||||| |||| | ||||||||||||||    
T  40993336 gacaccgacacatataattacactgaattatgtgattttttttaaattattagcggt 40993392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 34897137 - 34897088
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  34897137 gacacatataattacactgaattatgtgattttctcaaattattagcggt 34897088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 3025609 - 3025557
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  3025609 gacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 24362203 - 24362258
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  24362203 gacattgacacatataattacactgaattatgtgattctctcaaattattagcggt 24362258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 13844597 - 13844649
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 14134758 - 14134706
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||| |||| |||||||||  ||||||||||||||||||||||||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 29776085 - 29776042
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagc 29776042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 39954288 - 39954335
Alignment:
Q  156 cacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggt 39954335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 4611583 - 4611537
Alignment:
Q  157 acatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggt 4611537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 4786339 - 4786389
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 11927087 - 11927137
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||||||||  ||||||||||||||||| |||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 29510255 - 29510357
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| ||||||||||| ||||| ||||| ||| | || |||| ||| |  |||| ||||| | ||||||| ||||||| ||||||||| ||||||||||    
T  29510255 ggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattatt 29510354  T
Q  198 agc 200  Q
    |||    
T  29510355 agc 29510357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 30133159 - 30133121
Alignment:
Q  159 atataattatgctgaattatgtgattttctcaaattatt 197  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30133159 atataattatgctgaattatgttattttctcaaattatt 30133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 31236584 - 31236630
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||    
T  31236584 gacacatataattacattgaattatgtgattttctcaaattattagc 31236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 12606829 - 12606882
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||| ||||||||||||||   |||||||| |||||||||||||||||||||    
T  12606829 tgacaccgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 14731763 - 14731718
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||  || ||||||||||||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 18067957 - 18067990
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||||||||||||||||||||||    
T  18067957 ctgaattatgtgattttctcaaattattagcggt 18067990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 22652075 - 22651982
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||| ||||| |||| |||| | || |||| ||| | ||||| ||||| | |||||||  |||||||||||||||| |||||||||||||    
T  22652075 gtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagc 22651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 33382018 - 33382075
Alignment:
Q  146 atgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||| ||||||||||||||  ||||||||||| ||||||| ||||||||| ||||    
T  33382018 atgacaccgacacatataattactctgaattatgtcattttcttaaattattatcggt 33382075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 8798838 - 8798882
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||||||||||  |||||||||| |||||||||||||||||    
T  8798838 gacacatataattatattgaattatgttattttctcaaattatta 8798882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 20679395 - 20679447
Alignment:
Q  147 tgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||| ||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  20679395 tgacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 11803310 - 11803267
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||||||||||||  ||||||||||||||||||| |||||||||    
T  11803310 acacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 31109519 - 31109574
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||||| |||  ||||||| | ||||||||||||||||||| ||||    
T  31109519 gacactgacacatatagttagactgaattgtttgattttctcaaattattaacggt 31109574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 7658520 - 7658470
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||| |||| |||||||||  ||||||||||| ||||||||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 8343424 - 8343322
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| || |||||||| ||||| ||||||||| | || ||||    || ||||||||||| | ||||||  || |||||||||||||| ||||||||||    
T  8343424 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattatt 8343325  T
Q  198 agc 200  Q
    |||    
T  8343324 agc 8343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 11944723 - 11944673
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||||||||  |||| |||||||||||| |||||||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 27213599 - 27213553
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||||||   |||||||||||||||||| |||||||||||    
T  27213599 gacacatataattacagtgaattatgtgattttctgaaattattagc 27213553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 33405385 - 33405435
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||| ||||||||||||||  || ||||||||| ||||||||||||||||    
T  33405385 gacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 37283824 - 37283866
Alignment:
Q  161 ataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||  ||||||||||||||||||||| ||||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggt 37283866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 20785472 - 20785521
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||   | ||||||||||||| |||||||||||||||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattattagcggt 20785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 13203688 - 13203648
Alignment:
Q  159 atataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||  ||||||||||| ||||||||||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 18069155 - 18069187
Alignment:
Q  171 tgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| ||||||||||||||||||||||||    
T  18069155 tgaattatttgattttctcaaattattagcggt 18069187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 25566899 - 25566847
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 25566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 26902176 - 26902216
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttct 188  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  26902176 gacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 29447134 - 29447162
Alignment:
Q  171 tgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||||||||||||||||||    
T  29447134 tgaattatgtgattttctcaaattattag 29447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 35519808 - 35519860
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    |||||||||||||| | |||| |  |||||||||||||| |||||||||||||    
T  35519808 gacactgacacatacatttatacaaaattatgtgattttttcaaattattagc 35519860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 36934721 - 36934673
Alignment:
Q  155 acacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||||||||   |||||||||||||||| || |||||||||||||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggt 36934673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    |||| ||||| | ||||||  ||||||||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 9707 - 9799
Alignment:
Q  107 gtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||  ||| ||||| | ||||||| | | | ||||| ||||||||||||||  |||||||| |||||||||||||||||||||    
T  9707 gtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 68232 - 68298
Alignment:
Q  137 gacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||| ||||| ||||||||||| ||||||||| || |||||| ||||||||||||||||||| ||||    
T  68232 gacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattattaacggt 68298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 44532 - 44581
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  44532 gacacatataattacactgaattatgtgattttctcaaatttttagcggt 44581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 135313 - 135365
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||| ||||||||||||||  | |||||||||||||||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 1092 - 1038
Alignment:
Q  149 acactgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||||||| |||  ||||||||||| ||||| ||||||||||||||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggt 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 20230 - 20178
Alignment:
Q  148 gacactgacacatataattatgctgaattatgtgattttctcaaattattagc 200  Q
    ||||||||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  20230 gacactgacacttgtaattacactgaattatgtgattttttcaaattattagc 20178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 21095 - 21051
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    ||||||||||||||| | || ||||||||||||||||||||||||    
T  21095 gacacatataattataccgacttatgtgattttctcaaattatta 21051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 92862 - 92810
Alignment:
Q  151 actgacacatataattatgctgaattatgtgattttctcaaattattagcggt 203  Q
    |||||||| | ||||||  ||||||||||| ||||||||||||||||||||||    
T  92862 actgacacttgtaattacactgaattatgtaattttctcaaattattagcggt 92810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 13436 - 13407
Alignment:
Q  170 ctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||||||||||||||||||||    
T  13436 ctgaattatgtgattttctcaaattattag 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 21891 - 21920
Alignment:
Q  170 ctgaattatgtgattttctcaaattattag 199  Q
    ||||||||||||||||||||||||||||||    
T  21891 ctgaattatgtgattttctcaaattattag 21920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 8738 - 8673
Alignment:
Q  134 tctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattattag 199  Q
    |||||||| || | ||||| ||||| ||||||||| ||||| ||||||||||||  ||||||||||    
T  8738 tctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattag 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 63809 - 63776
Alignment:
Q  170 ctgaattatgtgattttctcaaattattagcggt 203  Q
    ||||||||||| ||||||||||||||||||||||    
T  63809 ctgaattatgtaattttctcaaattattagcggt 63776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 3800 - 3900
Alignment:
Q  98 ggattgggtgtgtcccgatgtcgaacacgtgtcatatctgacatcgatatgacactgacacatataattatgctgaattatgtgattttctcaaattatt 197  Q
    ||||| || ||||| |||||||| ||| ||||| | || |||| | | | ||||||||||| | ||||||  ||||||||||||||||| | ||||||||    
T  3800 ggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatt 3899  T
Q  198 a 198  Q
    |    
T  3900 a 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 26428 - 26400
Alignment:
Q  171 tgaattatgtgattttctcaaattattag 199  Q
    |||||||||||||||||||||||||||||    
T  26428 tgaattatgtgattttctcaaattattag 26400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 90895 - 90851
Alignment:
Q  154 gacacatataattatgctgaattatgtgattttctcaaattatta 198  Q
    |||| |||||||||  ||||||||| |||||||||||||||||||    
T  90895 gacatatataattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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