View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18296_low_1 (Length: 855)

Name: NF18296_low_1
Description: NF18296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18296_low_1
NF18296_low_1
[»] chr4 (18 HSPs)
chr4 (339-838)||(55870710-55871209)
chr4 (13-273)||(55871192-55871452)
chr4 (275-335)||(20281205-20281265)
chr4 (273-338)||(24827826-24827891)
chr4 (273-338)||(31759668-31759733)
chr4 (273-337)||(19238588-19238652)
chr4 (273-336)||(14451758-14451820)
chr4 (277-339)||(21660153-21660215)
chr4 (277-339)||(21668917-21668979)
chr4 (273-338)||(37109361-37109426)
chr4 (273-336)||(19680800-19680863)
chr4 (276-339)||(24234649-24234712)
chr4 (275-338)||(36421248-36421311)
chr4 (279-338)||(49576904-49576963)
chr4 (273-338)||(5795419-5795484)
chr4 (273-338)||(46545712-46545777)
chr4 (273-338)||(47044718-47044783)
chr4 (273-338)||(55427210-55427275)
[»] chr2 (21 HSPs)
chr2 (448-798)||(34675190-34675540)
chr2 (273-338)||(37480076-37480141)
chr2 (275-338)||(14780509-14780572)
chr2 (273-338)||(19244110-19244175)
chr2 (273-336)||(42602555-42602618)
chr2 (273-339)||(19016032-19016098)
chr2 (273-323)||(29197401-29197451)
chr2 (273-338)||(23052533-23052598)
chr2 (273-338)||(34041598-34041663)
chr2 (273-338)||(35916087-35916152)
chr2 (273-338)||(39714993-39715058)
chr2 (273-338)||(42327405-42327470)
chr2 (273-337)||(5147690-5147754)
chr2 (275-323)||(7667494-7667542)
chr2 (273-336)||(1729817-1729880)
chr2 (273-336)||(32106567-32106630)
chr2 (273-323)||(7799060-7799110)
chr2 (273-339)||(12994385-12994451)
chr2 (292-338)||(42420289-42420335)
chr2 (273-338)||(29503272-29503337)
chr2 (273-338)||(30808657-30808722)
[»] chr5 (14 HSPs)
chr5 (439-684)||(24888470-24888720)
chr5 (273-339)||(30883207-30883273)
chr5 (273-338)||(16773808-16773873)
chr5 (273-338)||(40461623-40461688)
chr5 (273-323)||(8278300-8278350)
chr5 (273-338)||(14495815-14495880)
chr5 (273-338)||(25627058-25627123)
chr5 (279-338)||(1410669-1410728)
chr5 (273-336)||(34984807-34984870)
chr5 (276-338)||(16436622-16436683)
chr5 (273-323)||(22737083-22737133)
chr5 (273-323)||(40281117-40281167)
chr5 (273-338)||(16457811-16457876)
chr5 (273-338)||(19043459-19043524)
[»] chr3 (19 HSPs)
chr3 (273-339)||(39976440-39976506)
chr3 (273-323)||(31510743-31510793)
chr3 (273-338)||(24481582-24481647)
chr3 (273-338)||(27093371-27093436)
chr3 (273-338)||(37788475-37788540)
chr3 (273-337)||(47810755-47810819)
chr3 (279-338)||(4844521-4844580)
chr3 (279-338)||(4870217-4870276)
chr3 (273-336)||(5499419-5499482)
chr3 (273-336)||(7673270-7673333)
chr3 (279-338)||(17554778-17554837)
chr3 (284-331)||(26411557-26411604)
chr3 (274-336)||(8390639-8390701)
chr3 (273-323)||(36720382-36720432)
chr3 (273-318)||(9832498-9832543)
chr3 (273-338)||(14186649-14186713)
chr3 (273-338)||(21960552-21960617)
chr3 (276-333)||(27211747-27211804)
chr3 (273-334)||(51766897-51766957)
[»] chr7 (24 HSPs)
chr7 (273-338)||(22760864-22760929)
chr7 (273-323)||(23301627-23301677)
chr7 (273-323)||(2446309-2446359)
chr7 (273-339)||(23552119-23552185)
chr7 (273-338)||(7801181-7801246)
chr7 (273-338)||(15137554-15137619)
chr7 (273-338)||(18056785-18056850)
chr7 (273-338)||(20335841-20335906)
chr7 (273-338)||(26459420-26459485)
chr7 (273-338)||(42836011-42836076)
chr7 (273-338)||(43215185-43215250)
chr7 (273-338)||(43590908-43590973)
chr7 (268-336)||(30442484-30442552)
chr7 (268-339)||(3280494-3280565)
chr7 (273-336)||(5273602-5273665)
chr7 (280-323)||(36877239-36877282)
chr7 (273-338)||(41487363-41487425)
chr7 (273-323)||(26526291-26526341)
chr7 (273-323)||(27776173-27776223)
chr7 (273-338)||(14058254-14058319)
chr7 (273-338)||(14368282-14368347)
chr7 (273-338)||(22932721-22932786)
chr7 (273-338)||(25021345-25021410)
chr7 (277-338)||(41519274-41519335)
[»] chr6 (10 HSPs)
chr6 (273-338)||(31623001-31623066)
chr6 (273-338)||(33549105-33549170)
chr6 (273-338)||(12234517-12234582)
chr6 (275-324)||(13441053-13441102)
chr6 (274-338)||(32613150-32613214)
chr6 (278-338)||(34444809-34444869)
chr6 (292-338)||(3779359-3779405)
chr6 (273-339)||(12188312-12188378)
chr6 (273-323)||(12633010-12633060)
chr6 (273-323)||(21418471-21418521)
[»] scaffold0258 (1 HSPs)
scaffold0258 (273-338)||(15333-15398)
[»] chr8 (13 HSPs)
chr8 (273-338)||(19703497-19703562)
chr8 (273-338)||(23361659-23361724)
chr8 (273-338)||(44780124-44780189)
chr8 (274-338)||(2203494-2203558)
chr8 (275-319)||(25058670-25058714)
chr8 (273-323)||(20994483-20994533)
chr8 (273-339)||(22268943-22269008)
chr8 (273-323)||(29431012-29431062)
chr8 (273-338)||(6436565-6436630)
chr8 (273-338)||(8059633-8059698)
chr8 (273-338)||(16852341-16852406)
chr8 (273-338)||(26688866-26688931)
chr8 (273-338)||(28783061-28783126)
[»] chr1 (20 HSPs)
chr1 (273-336)||(31794276-31794339)
chr1 (273-338)||(10526824-10526889)
chr1 (273-338)||(27567132-27567197)
chr1 (273-338)||(51814495-51814560)
chr1 (273-338)||(52116791-52116856)
chr1 (273-336)||(25297773-25297836)
chr1 (273-340)||(45235387-45235454)
chr1 (273-339)||(8904415-8904481)
chr1 (279-325)||(35187926-35187972)
chr1 (277-339)||(37400279-37400341)
chr1 (273-339)||(40257400-40257466)
chr1 (273-323)||(44126396-44126446)
chr1 (273-322)||(4280477-4280526)
chr1 (273-338)||(9165205-9165270)
chr1 (273-338)||(11687634-11687699)
chr1 (273-334)||(16169992-16170053)
chr1 (271-323)||(18459256-18459309)
chr1 (273-338)||(19528337-19528402)
chr1 (273-338)||(37046986-37047050)
chr1 (273-338)||(44961766-44961831)
[»] scaffold0517 (1 HSPs)
scaffold0517 (277-339)||(7735-7797)
[»] scaffold0126 (1 HSPs)
scaffold0126 (292-338)||(25357-25403)
[»] scaffold0291 (1 HSPs)
scaffold0291 (273-338)||(2480-2545)


Alignment Details
Target: chr4 (Bit Score: 476; Significance: 0; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 339 - 838
Target Start/End: Complemental strand, 55871209 - 55870710
Alignment:
Q  339 aaagacaaaaagttttcaaagttcaaatctcattactttatgttgatcattttcttaggtaacctctacggaacaaagttttaggacagcgaaaatacat 438  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55871209 aaagacaaaaagttttcaaagttcaaatctcattacattatgttgatcattttcttaggtaacctctacggaacaaagttttaggacagcgaaaatacat 55871110  T
Q  439 gaatatttttatcgtcatgtagcatcgaatagcataccggaacagcttcattgtcttgacttgacgctggcaaatgagcacaccaacaatgcagcagcac 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55871109 gaatatttttatcgtcatgtagcatcgaatagcataccggaacagcttcattgtcttgacttgacgctggcaaatgagcacgccaacaatgcagcagcac 55871010  T
Q  539 gccttcggctaccatctgcagaccttgttcctgctctggttgacaattcttacttccactttattcttgcttcagacaatttgcttgctgcttctgtggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  55871009 gccttcggctaccatctgcagaccttgttcctgctctggttgacaattcttacttccactttgttcttgcttcagacaatgtgcttgctgcttctgtggt 55870910  T
Q  639 tgcaaaatcacttgttcaaaacagtttgcaaccttggaaagttgttttgcatataattacagataaaaagacttataattcgatgcacgcttggttttca 738  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55870909 tgcaaaatcacttgttcaaaacagtttgcaaccttggaaagttgttttgcatataattacagataaaaagacttataattcgatgcaggcttggttttca 55870810  T
Q  739 ctgcactcattatcacctgctgtaattgaggtcaagtcgttgcaagattttgattggtttagagagggaaaagtgtctcttctagaggcaatggaaaaag 838  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55870809 ctgcactcattatcacctgctataattgaggtcaagtcgttgcaagattttgattggtttagagagggaaaagtgtctcttctagaggcaatggaaaaag 55870710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 13 - 273
Target Start/End: Complemental strand, 55871452 - 55871192
Alignment:
Q  13 cataggtacattttctcttctcactctctattatacacacatgcattaacatataatatatcaaagcatgtatgtatgtgtattaactgaaaataatatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  55871452 cataggtacattttctcttctcactctctattatacacacatgcattaacatataatatatcaaagcatgtatgtatgtgtattaactgaaaataacatt 55871353  T
Q  113 tgcaggaagaaaaatggggccagagattttgggaagtaatctggaatcacctgtaatctcctgaactcttataactaaattaatacatccttggatccac 212  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55871352 tgcaggaagaaaaattgggccagagattttgggaagtaatctggaatcacctgtaatctcctgaactcttataactaaattaatacatccttgaatccac 55871253  T
Q  213 gtggtattttgaattagaggaaattagaagataaatataatccaaagacaaaaagttttca 273  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  55871252 gtggtattttgaattagaggaaattagaagataaatataatgcaaagacaaaaagttttca 55871192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 20281265 - 20281205
Alignment:
Q  275 ccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtc 335  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| | |||||||||    
T  20281265 ccacttgggttggtccggtggtattgacttgggaattgagagcgtgctcctcctcaaggtc 20281205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 24827826 - 24827891
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||| |||||||||||||||||||||||||||| || ||||| |||| | ||| ||||||||    
T  24827826 acccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctca 24827891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 31759733 - 31759668
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||| ||  ||||||||| ||||||||||| |||||||||| | ||||||||||||    
T  31759733 acccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctca 31759668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 19238652 - 19238588
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctc 337  Q
    ||||||||||||||| | |||||||||| ||||||||||| |||||||||| | ||| |||||||    
T  19238652 acccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctc 19238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 14451820 - 14451758
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    |||||||||||||||| ||||||| |||||||||||  ||||||||||||| | ||||||||||    
T  14451820 acccacttgggttggttcggtggt-ttgacttgggatatgagagtgtgctcctcctcaaggtct 14451758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 21660215 - 21660153
Alignment:
Q  277 acttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||| ||||||||||||||| ||  || |||||||||||| ||| |||||||||    
T  21660215 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaa 21660153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 21668979 - 21668917
Alignment:
Q  277 acttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||| ||||||||||||||| ||  || |||||||||||| ||| |||||||||    
T  21668979 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaa 21668917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 37109426 - 37109361
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||||||||||    
T  37109426 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 37109361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 19680863 - 19680800
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    |||||||||| |||| |  ||||||||  ||||||||||| |||||||||||| ||||||||||    
T  19680863 acccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtct 19680800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 24234649 - 24234712
Alignment:
Q  276 cacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    |||||||||||  | |||||||||| ||||||||||| |||||||||| | || ||||||||||    
T  24234649 cacttgggttgtccaggtggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaa 24234712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 36421311 - 36421248
Alignment:
Q  275 ccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| ||||||||| | |||||||   ||| |||||| |||||||||||||||||||||||||    
T  36421311 ccactagggttggtctgatggtattagattgagacttgcgagtgtgctctttctcaaggtctca 36421248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 49576963 - 49576904
Alignment:
Q  279 ttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||| | |||||||||| ||| ||||||| |||||||||| | ||||||||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctca 49576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 5795484 - 5795419
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| |||||| ||||||||| || |  |||| ||||| | ||||||||||||    
T  5795484 acccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctca 5795419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 46545712 - 46545777
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||| ||| ||||||||||||| | |||||| |||||    
T  46545712 acccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctca 46545777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 47044718 - 47044783
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||| |||| | ||||||||||||||||||  ||||||| ||||| | ||| ||||||||    
T  47044718 acccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctca 47044783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 55427275 - 55427210
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | |||||||||| |||||||| || |||| ||||| | ||| ||||||||    
T  55427275 acccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctca 55427210  T

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Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 448 - 798
Target Start/End: Complemental strand, 34675540 - 34675190
Alignment:
Q  448 tatcgtcatgtagcatcgaatagcataccggaacagcttcattgtcttgacttgacgctggcaaatgagcacaccaacaatgcagcagcacgccttcggc 547  Q
    ||||| ||||||||||| |  ||||||||| |||| |||||||||||||||||||   | ||| ||||||| |||||||| |||||||||||||||| ||    
T  34675540 tatcgccatgtagcatcaagcagcataccgaaacaacttcattgtcttgacttgagattagcacatgagcataccaacaacgcagcagcacgccttcagc 34675441  T
Q  548 taccatctgcagaccttgttcctgctctggttgacaattcttacttccactttattcttgcttcagacaatttgcttgctgcttctgtggttgcaaaatc 647  Q
    |||| ||||| || || |||||||| || ||||||||||| || | ||| ||| || | || ||||| ||| |||||||||| || || ||||||| |||    
T  34675440 taccgtctgcggaactagttcctgcccttgttgacaattcctattaccattttgttttagcctcagataatgtgcttgctgcctcggttgttgcaacatc 34675341  T
Q  648 acttgttcaaaacagtttgcaaccttggaaagttgttttgcatataattacagataaaaagacttataattcgatgcacgcttggttttcactgcactca 747  Q
    ||| ||||  ||| |||| | ||||   || |||||| | || |||||||||||   |||||||||| || ||||||| |||||||| ||| ||||  |     
T  34675340 actcgttcgtaactgtttacgacctaataaggttgttatacacataattacagaccgaaagacttattatccgatgcaggcttggttctcattgcatcct 34675241  T
Q  748 ttatcacctgctgtaattgaggtcaagtcgttgcaagattttgattggttt 798  Q
    |||||||||||||| |||||||||||| | |||||  ||||||||||||||    
T  34675240 ttatcacctgctgtgattgaggtcaaggcattgcaccattttgattggttt 34675190  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 37480076 - 37480141
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | |||||||||| |||||||| ||||||||||||| | ||||||||||||    
T  37480076 acccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctca 37480141  T

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Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 14780509 - 14780572
Alignment:
Q  275 ccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||||| ||||||||||| || |||||| ||||||| || |||||||||||    
T  14780509 ccacttgggttggtccggtagtattgacttgagatttgagaatgtgctccttttcaaggtctca 14780572  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 19244110 - 19244175
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||| | | ||||||||||    
T  19244110 acccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 19244175  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 42602555 - 42602618
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| ||||||||||||    
T  42602555 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtct 42602618  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 19016032 - 19016098
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||||||| | |||||||| |||| |||||| |||||||||| | ||| |||||||||    
T  19016032 acccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaa 19016098  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 29197451 - 29197401
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    |||||||||||||||   |||||||||||||||||||||| ||||||||||    
T  29197451 acccacttgggttggcttggtggtattgacttgggacttgggagtgtgctc 29197401  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 23052598 - 23052533
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||| |||||| | |||||||||| ||||||||||| |||||||||  | ||||||||||||    
T  23052598 acccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctca 23052533  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 34041663 - 34041598
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||||||| |||  ||||||||||||| | ||||||||||||    
T  34041663 acccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctca 34041598  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 35916087 - 35916152
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| ||||||||||||||| || || |||||||| || | |||||| |||||    
T  35916087 acccacttgggttggtctggtggtattgacttgagatttaagagtgtgttcctcctcaagatctca 35916152  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 39714993 - 39715058
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||   ||||||||||||||||||| || |||||||||| | ||| ||||||||    
T  39714993 acccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctca 39715058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 42327470 - 42327405
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||||||||||    
T  42327470 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 42327405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 5147754 - 5147690
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctc 337  Q
    |||||||||||||||||  |||||||||||||| ||  || |||| ||||| |||||||||||||    
T  5147754 acccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctc 5147690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 7667542 - 7667494
Alignment:
Q  275 ccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||| |||| ||||| ||||||||||| ||||||||||    
T  7667542 ccacttgggttggtcgggtgatattggcttgggacttgggagtgtgctc 7667494  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 1729817 - 1729880
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||||||||| |  ||||||||| ||||||||||| |||||||||| | ||| ||||||    
T  1729817 acccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtct 1729880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 32106567 - 32106630
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||||||||| | |||||| |||||||||||| |  ||||||||||  |||||||||||    
T  32106567 acccacttgggttggcctggtggtgttgacttgggaccttggagtgtgctccctctcaaggtct 32106630  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 7799110 - 7799060
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||  | |||||||||| ||||||||||| ||||||||||    
T  7799110 acccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctc 7799060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 12994451 - 12994385
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    |||| |||| |||||||  |||||||||||||||||| || |||||||||| | || ||||||||||    
T  12994451 acccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaa 12994385  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 42420289 - 42420335
Alignment:
Q  292 gtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||    
T  42420289 gtggtattggcttaggacctgagagtgtgctcttactcaaggtctca 42420335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 29503272 - 29503337
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  |||||||||  ||||||| || |||||||||| | ||||||||||||    
T  29503272 acccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctca 29503337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 30808722 - 30808657
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| |||| ||||| |||| ||| ||||| | ||||| | ||||||||||||    
T  30808722 acccacttgggttggtctggtgatattggcttgagacctgagaatatgctcctcctcaaggtctca 30808657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 1e-37; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 439 - 684
Target Start/End: Original strand, 24888470 - 24888720
Alignment:
Q  439 gaatatttttatcgtcatgtagcatcgaatagcataccggaacagcttcattgtcttgacttgacgctggcaaatgagcacaccaacaatgcagcagcac 538  Q
    |||||||| | | |||| ||||||||||  ||||||||| |||| ||||||| || |||||||| |||||| ||||||||||| | ||||||||| |  |    
T  24888470 gaatatttattttgtcaagtagcatcgagcagcataccgaaacaacttcattatcgtgacttgaggctggcgaatgagcacacaaccaatgcagctgtgc 24888569  T
Q  539 gccttcggctaccatctgcagaccttgttcctgctctggttgac------aattcttacttccactttattcttgcttcagacaatttgcttgctgcttc 632  Q
    |||||| || ||||||||||||  |||||| |||||||||||||      |||||||| || |||||| ||||||| |||||| || |||||||  | |     
T  24888570 gccttcagcaaccatctgcagaatttgttcttgctctggttgacaatattaattctta-tttcactttgttcttgcctcagaccatgtgcttgccacata 24888668  T
Q  633 tgtggttgcaaaatcacttgttcaaaacagtttgcaaccttggaaagttgtt 684  Q
    | |||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  24888669 tatggttgcaaaatcacttgttcacaacagtttgcaacctcagaaagttgtt 24888720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 30883273 - 30883207
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    |||||||||||||||||  ||||||||| |||||||| || |||||||||| | |||||||||||||    
T  30883273 acccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaa 30883207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 16773808 - 16773873
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||| ||||||| ||||||||||||||||||| || |||||||||| | ||| ||||||||    
T  16773808 acccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctca 16773873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 40461688 - 40461623
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||| || ||||||||| ||||| ||||||||||||||||  | ||||||||||||    
T  40461688 acccacttgggttgatctggtggtattaacttgagacttgagagtgtgcttctcctcaaggtctca 40461623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 8278350 - 8278300
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  8278350 acccacttgggttggtctgatggtattggcttgggacttgggagtgtgctc 8278300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 14495880 - 14495815
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| ||||||||||| ||||||||||||||||||  || |||||||||| | ||| ||||||||    
T  14495880 acccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctca 14495815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 25627058 - 25627123
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| ||||| ||||| |||||||||| | ||||||||||||    
T  25627058 acccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctca 25627123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 1410728 - 1410669
Alignment:
Q  279 ttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||| ||||||||||||||||||  || |||||||||| | ||| ||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctca 1410669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 34984807 - 34984870
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    |||||||||||||||||  ||||||||| ||||| || || |||||||||| | ||||||||||    
T  34984807 acccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtct 34984870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 16436622 - 16436683
Alignment:
Q  276 cacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||| |  ||||||||| ||||||||||| |||||||||| | ||||||||||||    
T  16436622 cacttgggttggcctagtggtattggcttgggacttg-gagtgtgctcctcctcaaggtctca 16436683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 22737083 - 22737133
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    |||||||||||||||||  ||||||||| |||||||||||  |||||||||    
T  22737083 acccacttgggttggtctagtggtattggcttgggacttggaagtgtgctc 22737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 40281167 - 40281117
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||||  ||||||||||| ||||||  |||||||||||||    
T  40281167 acccacttgggttggttaggtggtattgatttgggatatgagagtgtgctc 40281117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 16457811 - 16457876
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||| |||||| | |||||||||| |||||||| |  |||||||||| | ||||||||||||    
T  16457811 acccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctca 16457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 19043459 - 19043524
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||| ||||||||||| ||||| ||||||| || ||||||| ||||||    
T  19043459 acccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctca 19043524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 4e-22; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 39976506 - 39976440
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39976506 acccacttaggttggttcggtggtattgacttgggacttgagagtgtgctccttctcaaggtctcaa 39976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 31510793 - 31510743
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| |||||    
T  31510793 acccacttaggttggtctggtggtattgacttgggacttgggagtatgctc 31510743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 24481582 - 24481647
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||| |||||||  |||||||||  |||||||||||||||||||| |||||| | ||||||    
T  24481582 acccacttgagttggtctagtggtattggtttgggacttgagagtgtgctttttctcgacgtctca 24481647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 27093436 - 27093371
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| ||||| ||||| |||||||||| | ||||||||||||    
T  27093436 acccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctca 27093371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 37788540 - 37788475
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| || ||||||||||||||| || |  |||||||||| | ||||||||||||    
T  37788540 acccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctca 37788475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 47810819 - 47810755
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctc 337  Q
    ||||||||||||||||| |||||||||| ||| || |||| |||||||||| | | |||||||||    
T  47810819 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctc 47810755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 4844580 - 4844521
Alignment:
Q  279 ttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||| ||||||||||||||||||  || |||||||||| | ||| ||||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctca 4844521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 4870276 - 4870217
Alignment:
Q  279 ttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||| ||||||||||||||||||  || |||||||||| | ||| ||||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctca 4870217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 5499482 - 5499419
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||||||||| | ||||||||||||||| ||  ||||||||||||| | || |||||||    
T  5499482 acccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtct 5499419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 7673270 - 7673333
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||| || |||||||| |||||||||||||||||| |||  ||||||||  ||||||||||||    
T  7673270 acccagttaggttggtctggtggtattgacttgggatttggaagtgtgcttattctcaaggtct 7673333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 17554778 - 17554837
Alignment:
Q  279 ttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||  |||||||||| |||||||| || |||||||||||| ||||||| ||||    
T  17554778 ttgggttggtttggtggtattggcttgggacctgggagtgtgctcttcctcaagggctca 17554837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 26411557 - 26411604
Alignment:
Q  284 ttggtccggtggtattgacttgggacttgagagtgtgctctttctcaa 331  Q
    |||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  26411557 ttggtctggtgatattgacttgggacctgagagtgtgctccttctcaa 26411604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 8390639 - 8390701
Alignment:
Q  274 cccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||| ||||||  ||||||||| |||| ||||||  ||||||||||| ||||||||||    
T  8390639 cccacttggattggtctagtggtattgccttgagacttggaagtgtgctcttcctcaaggtct 8390701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 36720382 - 36720432
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||||| |||||||||| |||||||  || ||||||||||    
T  36720382 acccacttgggttggtctggtggtattggcttgggatatgggagtgtgctc 36720432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 9832498 - 9832543
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtg 318  Q
    ||||||||||||||| |||||||||||| |||||||| || |||||    
T  9832498 acccacttgggttggcccggtggtattggcttgggacctgggagtg 9832543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 14186649 - 14186713
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||||||||||    
T  14186649 acccacttgggttggcctagtggtattgtcttgggacctg-gagtgtgctcctcctcaaggtctca 14186713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 21960552 - 21960617
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| ||||||||  | |||||||||| |||||||| ||||||||||||| | ||| ||||||||    
T  21960552 acccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctca 21960617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 27211747 - 27211804
Alignment:
Q  276 cacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaagg 333  Q
    ||||||||||||||  ||||||||||| | |||||||| ||| ||||||| |||||||    
T  27211747 cacttgggttggtctcgtggtattgacctaggacttgacagtatgctcttcctcaagg 27211804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 51766897 - 51766957
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggt 334  Q
    ||||||||||||| ||||| |||||||||||| |||  || |||||||||||| ||||||||    
T  51766897 acccacttgggttagtccgatggtattgactt-ggatctgggagtgtgctcttcctcaaggt 51766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 22760864 - 22760929
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||| | ||||||||||||    
T  22760864 acccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctca 22760929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 23301677 - 23301627
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  23301677 acccacttgggttggcctggtggtattgacttgggacttgggagtgtgctc 23301627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 2446309 - 2446359
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  2446309 acccacttgggttggtctgatggtattggcttgggacttgggagtgtgctc 2446359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 23552119 - 23552185
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||||| |  ||| |||||||||||||| || |||||||||| | |||||||||||||    
T  23552119 acccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaa 23552185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 7801181 - 7801246
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||| |||| | ||||||||||||||||||| || |||||||||| |  |||||||||||    
T  7801181 acccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctca 7801246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 15137554 - 15137619
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | ||||||| |||||||||| ||  |||||||||| | ||||||||||||    
T  15137554 acccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctca 15137619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 18056850 - 18056785
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||| ||| ||||||||||||||||| |||  |||||||||| | || |||||||||    
T  18056850 acccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctca 18056785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 20335906 - 20335841
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||||  | ||||||| ||||||||||| |||||||||| | ||| ||||||||    
T  20335906 acccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctca 20335841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 26459485 - 26459420
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||||||||||    
T  26459485 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 26459420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 42836076 - 42836011
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||||| ||||||| ||||    
T  42836076 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctca 42836011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 43215185 - 43215250
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||||  ||||||||| |||||||| |  |||||||||| | ||||||||||||    
T  43215185 acccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctca 43215250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 43590908 - 43590973
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| ||||||||| | |||||||||| ||||||||||| |||||||||| | ||||| ||||||    
T  43590908 acccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctca 43590973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 30442484 - 30442552
Alignment:
Q  268 ttttcacccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    |||| ||||||||||||||| || ||||||||| |||||||| || |||| ||||| | ||||||||||    
T  30442484 ttttaacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtct 30442552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 3280565 - 3280494
Alignment:
Q  268 ttttcacccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    |||| ||||||||||||||    |||||||||| ||||||||  |||||||||||| | |||||||||||||    
T  3280565 ttttaacccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaaggtctcaa 3280494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 5273665 - 5273602
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||||||||| | |||||| ||| |||||||| | ||||||||||| | ||||||||||    
T  5273665 acccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtct 5273602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 36877282 - 36877239
Alignment:
Q  280 tgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||| || ||||||||||||||||||||||||||| |||||    
T  36877282 tgggttgatcaggtggtattgacttgggacttgagagtatgctc 36877239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 41487363 - 41487425
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | |||||||||| ||||||||||| |||||| |||   ||||||||||||    
T  41487363 acccacttgggttggcctggtggtattggcttgggacttgggagtgttctc---ctcaaggtctca 41487425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 26526291 - 26526341
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||| |||| |||||| |||||||||||||| ||| ||||||||||||||    
T  26526291 acccatttggattggtctggtggtattgacttaggatttgagagtgtgctc 26526341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 27776173 - 27776223
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||| | ||||||||   ||||||||||||||||||||||    
T  27776173 acccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctc 27776223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 14058254 - 14058319
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||| |||| ||||| | |||||||||| ||||| || ||||||||||||| | ||||||||||||    
T  14058254 acccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctca 14058319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 14368282 - 14368347
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||| |||| ||||| | |||||||||| ||||| || ||||||||||||| | ||||||||||||    
T  14368282 acccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctca 14368347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 22932786 - 22932721
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||  |||||||||| |||||||| || ||||| ||||||  ||||| |||||    
T  22932786 acccacttgggttggtatggtggtattggcttgggacctgggagtgcgctcttattcaagatctca 22932721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 25021410 - 25021345
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||| ||||||    
T  25021410 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 41519335 - 41519274
Alignment:
Q  277 acttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||| |  ||||||||||||||||| ||  |||||||||| | ||||||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctca 41519274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 31623066 - 31623001
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||||||||||||||| |||||||| || |||||||||| | ||| ||||||||    
T  31623066 acccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctca 31623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 33549105 - 33549170
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| |||||||||| |||||||| || |||||||||| | ||| ||||||||    
T  33549105 acccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctca 33549170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 12234582 - 12234517
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||| |||||| | ||||||||||||||||||| || ||||||||||  |||| ||||||||    
T  12234582 acccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctca 12234517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 13441053 - 13441102
Alignment:
Q  275 ccacttgggttggtccggtggtattgacttgggacttgagagtgtgctct 324  Q
    ||||||||||||||| |||||||||| |||||||| || |||||||||||    
T  13441053 ccacttgggttggtcgggtggtattggcttgggacctgggagtgtgctct 13441102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 274 - 338
Target Start/End: Complemental strand, 32613214 - 32613150
Alignment:
Q  274 cccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||| | |||||||||||||||||   || |||||||||| |||||||| |||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctca 32613150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 34444809 - 34444869
Alignment:
Q  278 cttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||| | ||||||||||||||||||| | ||||||||||| | | ||||||||||    
T  34444809 cttgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctca 34444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 3779359 - 3779405
Alignment:
Q  292 gtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||| |||| |||||| |||||||||| ||||||||||||||    
T  3779359 gtggtattggcttgagacttgggagtgtgctccttctcaaggtctca 3779405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 12188378 - 12188312
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | |||||||| ||||    
T  12188378 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaa 12188312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 12633010 - 12633060
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||  |||||| ||||||||||||| ||| ||||||||||    
T  12633010 acccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctc 12633060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 21418471 - 21418521
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||| ||||||||| | |||||||||| ||||||||||| ||||||||||    
T  21418471 acccagttgggttggcctggtggtattggcttgggacttgggagtgtgctc 21418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 15398 - 15333
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| |||||||||| |||||||| || |||||||||| | ||| ||||||||    
T  15398 acccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctca 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 19703562 - 19703497
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| ||||||||||||| | ||||||||||||    
T  19703562 acccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctca 19703497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 23361724 - 23361659
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||  | ||||||||||||||||||  || |||||||||| | ||||||||||||    
T  23361724 acccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctca 23361659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 44780189 - 44780124
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  |||| |||| ||||||||||| |||||||||| | ||||||||||||    
T  44780189 acccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctca 44780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 2203494 - 2203558
Alignment:
Q  274 cccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 2203558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 25058714 - 25058670
Alignment:
Q  275 ccacttgggttggtccggtggtattgacttgggacttgagagtgt 319  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||    
T  25058714 ccacttggtttggtctggtggtattgacttgggacctgagagtgt 25058670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 20994533 - 20994483
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||| |  |||||||||||||||||| || ||||||||||    
T  20994533 acccacttgggttggcctagtggtattgacttgggacctgggagtgtgctc 20994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 22269008 - 22268943
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||||| | |||||| ||| |||||||| |  |||||||||| |||||||||||||||    
T  22269008 acccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc-ttctcaaggtctcaa 22268943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 29431012 - 29431062
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||| | || ||||||| ||||||||||| ||||||||||    
T  29431012 acccacttgggttggcctggcggtattggcttgggacttgggagtgtgctc 29431062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 6436630 - 6436565
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||  | |||||||||| ||||||||||  |||||||||| | | ||||||||||    
T  6436630 acccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctca 6436565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 8059633 - 8059698
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | | |||||||||||||| |  |||||||||| || | ||||||||||||    
T  8059633 acccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctca 8059698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 16852341 - 16852406
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||| ||||||||    
T  16852341 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctca 16852406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 26688866 - 26688931
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | |||||| ||| |||||||| |  |||||||||| | ||||||||||||    
T  26688866 acccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctca 26688931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 28783061 - 28783126
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||   |||||||||| |||| ||| || |||||||||| | ||||||||||||    
T  28783061 acccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctca 28783126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000008; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 31794339 - 31794276
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    ||||||||||||||| |  ||||||||| ||||||||||| |||||||||| | ||||||||||    
T  31794339 acccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 10526824 - 10526889
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| |||||||||||| ||||||||| |||||||| || |||| ||||| | ||||||||||||    
T  10526824 acccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctca 10526889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 27567197 - 27567132
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| | || ||||||||||| || ||||||||||||| |  |||||||||||    
T  27567197 acccacttgggttggtcggatgatattgacttggaacctgagagtgtgctcctcttcaaggtctca 27567132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 51814495 - 51814560
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | | ||||||||||||| ||  ||||||||||||| | ||||||||||||    
T  51814495 acccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctca 51814560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 52116856 - 52116791
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| ||||||||| | |||||||||| ||||||||||| |||||||||| | ||||| ||||||    
T  52116856 acccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctca 52116791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 25297773 - 25297836
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtct 336  Q
    |||||||||||||||||  ||||||||||||| |||  ||||||||||||| | ||| ||||||    
T  25297773 acccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtct 25297836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 45235454 - 45235387
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaaa 340  Q
    ||||||||||||||||| | ||||||||  |||||||||| |||||||||| | ||| || |||||||    
T  45235454 acccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctcgagatctcaaa 45235387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 8904415 - 8904481
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||||| |  || ||||||||||||||  || |||||||||| | |||||||||||||    
T  8904415 acccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaa 8904481  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 35187926 - 35187972
Alignment:
Q  279 ttgggttggtccggtggtattgacttgggacttgagagtgtgctctt 325  Q
    ||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  35187926 ttgggttggcctagtggtattgacttggaacttgagagtgtgctctt 35187972  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 37400279 - 37400341
Alignment:
Q  277 acttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||| |||||||||| |||| ||| ||| ||||||||| | || ||||||||||    
T  37400279 acttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaa 37400341  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 40257400 - 40257466
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||||| | |||||||||| |||| ||| || |||||||||| | ||| |||||||||    
T  40257400 acccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaa 40257466  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 44126396 - 44126446
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctc 323  Q
    ||||||||||||||| | |||||||||||| |||||| || ||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctc 44126446  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 4280526 - 4280477
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgct 322  Q
    ||||||||||||| ||  | || |||||||||||||||||||||||||||    
T  4280526 acccacttgggttagtatgatgatattgacttgggacttgagagtgtgct 4280477  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 9165270 - 9165205
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| |  ||||||||| |||||||| || |||||||||| | ||||| ||||||    
T  9165270 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 9165205  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 11687699 - 11687634
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    |||||||||||||||||| |||| ||||||||||||  ||  ||||||||| || || ||||||||    
T  11687699 acccacttgggttggtccagtggcattgacttgggatctggaagtgtgctccttttcgaggtctca 11687634  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 16170053 - 16169992
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggt 334  Q
    ||||||||||||| | | ||||||||||||||||||| || ||||||| || | ||||||||    
T  16170053 acccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggt 16169992  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 18459309 - 18459256
Alignment:
Q  271 tcacccacttgggttggtccggtggta-ttgacttgggacttgagagtgtgctc 323  Q
    |||||||||||||||||||  |||||| ||| ||||||||||| ||||||||||    
T  18459309 tcacccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctc 18459256  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 19528402 - 19528337
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||| | |||||||||| |||||||  |  |||||||||| | ||||||||||||    
T  19528402 acccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctca 19528337  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 37046986 - 37047050
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| |||||| ||| |||||||| |  ||||||||||  |||||||||||||    
T  37046986 acccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctc-ctctcaaggtctca 37047050  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 44961766 - 44961831
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||||||||||| |||||||||  |||| || || ||||||||||| | |||| |||||||    
T  44961766 acccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctca 44961831  T

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Target: scaffold0517 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 7797 - 7735
Alignment:
Q  277 acttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctcaa 339  Q
    ||||||||||||| |||||||||| |||| ||| ||| ||||||||| | || ||||||||||    
T  7797 acttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaa 7735  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 25403 - 25357
Alignment:
Q  292 gtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||||||| |||| |||||| |||||||||| ||||||||||||||    
T  25403 gtggtattggcttgagacttgggagtgtgctccttctcaaggtctca 25357  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 2545 - 2480
Alignment:
Q  273 acccacttgggttggtccggtggtattgacttgggacttgagagtgtgctctttctcaaggtctca 338  Q
    ||||| ||||||||||||||||||||||  || |||  || |||||||||| | ||||||||||||    
T  2545 acccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctca 2480  T

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