View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18296_low_16 (Length: 281)
Name: NF18296_low_16
Description: NF18296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18296_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 262
Target Start/End: Complemental strand, 46795402 - 46795137
Alignment:
| Q |
3 |
agatggacatcatcaatcacaatgcctaaatttcttctatcatcagctttccattttccagtaacaaaacaagggttggggttggggttg------tggt |
96 |
Q |
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| T |
46795402 |
agatgaacatcacaaatcacaatacctaaatttcttctatcatcagctttccattttccaataacaaaacaagggttggggttggggttggggttgtggt |
46795303 |
T |
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| Q |
97 |
cagggtaaaacgaaagacacaaaattacagaaaacataaattgattgattgatttgaaatccagaaaacataaattactgaaccaatcaaaagaagccat |
196 |
Q |
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| T |
46795302 |
cagggtaaaacaaaagacataaaattacagaaaacataaattgattgattgatttgaaatccagaaaacataaattactgaaccaatcaaaagaagccat |
46795203 |
T |
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| Q |
197 |
gaaaaggtaagaacgaaattataactacgaactcaccacgaaaataatatgaatggatgaaaggaa |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46795202 |
gaaaaggtaagaacgaaattataactacgaactcaccacgaaaataatatgaatggatgaaaggaa |
46795137 |
T |
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