View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18297_low_11 (Length: 349)
Name: NF18297_low_11
Description: NF18297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18297_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 11 - 331
Target Start/End: Original strand, 1807364 - 1807684
Alignment:
| Q |
11 |
caaaggcagcggcttcgaatatattttacaaatagaaacaagagaaagaccattaccacaattatcaacaaacataaaatacttaaatagattgccaaga |
110 |
Q |
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| T |
1807364 |
caaaggcagcggcttcgaatatattttacaaatagaaacaagagaaagaccattaccacaattatcaacaaacataaaatacttaaatagattgccaaga |
1807463 |
T |
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| Q |
111 |
aaatctgaatgccatgtataaatggtaacacactttgttggtcatcagctggttgttgtggatgatcagatggtgaaggagaagctgctgatggttcaag |
210 |
Q |
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| T |
1807464 |
aaatctgaatgccatgtataaatggtaacacactttgttggtcatcagctggttgttgtggatgatcagatggtgaaggagaagctgctgatggttcaag |
1807563 |
T |
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| Q |
211 |
aggagaacttccggtggacggtgaatccgctgttgatcgatagacgactgataatgtcttccttggcaatgaaggtggagattgagtcattgtagtagtg |
310 |
Q |
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| T |
1807564 |
aggagaacttccggtggacggtgaatccgccgttgatcgatagacgactgataatgtcttccttggcaatgaaggtggagattgagtcattgtagtagtg |
1807663 |
T |
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| Q |
311 |
cacaataacaatgcagacaca |
331 |
Q |
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| T |
1807664 |
cacaataacaatgcagacaca |
1807684 |
T |
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