View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18298_high_2 (Length: 492)
Name: NF18298_high_2
Description: NF18298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18298_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 22 - 485
Target Start/End: Original strand, 32240166 - 32240630
Alignment:
| Q |
22 |
agctgggtgctacgcctgttcctttttactttcnnnnnnnnnngtgtgtggtttataggcttctacggtgctctctggggtttccactcacagagcacct |
121 |
Q |
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| T |
32240166 |
agctgggtgctacgcctgttcctttttactttcttttttttt-gtgtgtggtttataggcttctgcggtgctctctggggtttccactcacagagcacct |
32240264 |
T |
|
| Q |
122 |
ataaaaggtgttaaacttttgtcagaaggtttgaaaattttgtcttttgttcagagattctgaaatccccctgttttaatttaattttcacttggattgg |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32240265 |
ataaaaggtgttaaacttttgtcagaaggtttgaaaattttgtcttttgttcagagattctgaaacccccctgttttaatttaattttcacttggattgg |
32240364 |
T |
|
| Q |
222 |
ttgattaaacaatgcattttatctgtcnnnnnnncactataaattttacttcatttgctggaaatttctggtttagggtatatgtggtttctgcaaaagg |
321 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240365 |
ttgattaaacaatgcattttatctgtctttttttcactataaattttacttcatttgctggaaatttctggtttagggtatatgtggtttctgcaaaagg |
32240464 |
T |
|
| Q |
322 |
taattaccatgtgtcaggaagtttgaaactattggcaatgggtcagagatactgatttttcccttcttttcttttaattgattctgacactgcgtgtata |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240465 |
taattaccatgtgtcaggaagtttgaaactattggcaatgggtcagagatactgatttttcccttcttttcttttaattgattctgacactgcgtgtata |
32240564 |
T |
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| Q |
422 |
aaagatgaaattcata--tgccctttttctctataaaatggtgcttgctgtgttcatttcatctca |
485 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240565 |
aaagatgaaattcatatgtgccctttttctctataaaatggtgcttgctgtgttcatttcatctca |
32240630 |
T |
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