View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1829_high_8 (Length: 239)
Name: NF1829_high_8
Description: NF1829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1829_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 6885044 - 6884811
Alignment:
| Q |
1 |
ttgtattgttattcccaccaaagtttttcgattttggttaataatttttgttctcatgtgttgttacagaaattgttatatctggtggcatgtcaatacc |
100 |
Q |
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| T |
6885044 |
ttgtattgttattcccaccaaagtttttcgattttcgttaataatttttgttctcatgtgttgatacagaaattgttatatctggtggcatgtcaatacc |
6884945 |
T |
|
| Q |
101 |
tcaagtaatgactactggagatgctcatgccaaacttgcctcaagaatccccatatcctttgcaacatcaaaagtataatgatgggatagtttgtgagca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
6884944 |
tcaagtaatgactactggagatgctcatgccaaacttgcctcaagaatccccatatcctttgcaacatcaaaagtataatgatgggataatttgtgagca |
6884845 |
T |
|
| Q |
201 |
caagtgtgtgttcatttcaattgtggtttctgtg |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
6884844 |
caagtgtgtgttcatttcaattgtggtttctgtg |
6884811 |
T |
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