View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18302_high_34 (Length: 249)
Name: NF18302_high_34
Description: NF18302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18302_high_34 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 47455969 - 47456196
Alignment:
| Q |
8 |
gagatgaatataaaatgattattagtgtcactttaataattaataacaataatttgacattttgtgagtttgtaacggtttgtgctcgtggtttcgaaat |
107 |
Q |
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| T |
47455969 |
gagatggatataaaatgattattagtgtcactttaataattaataacaataatttgacattttgtgagtttgtaacggtttgtgctcgtggtttcgaaat |
47456068 |
T |
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| Q |
108 |
tcaggtgcaaagatacgtaaataatgcagagtccaagaagagcaagaaggttaatagaaatgagaacaaggcagaagaagccaatacaagtatagatgga |
207 |
Q |
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| T |
47456069 |
tcaggtgcaaagatacgtaaataatgcagagtccaagaagagcaagaaggttaatagaaatgagaacaaggcagaagaagccaatacaagtatagatgga |
47456168 |
T |
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| Q |
208 |
cataactctagtggttatacctcagagg |
235 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
47456169 |
cataactctagtggttatacctcagagg |
47456196 |
T |
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