View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18303_low_5 (Length: 459)
Name: NF18303_low_5
Description: NF18303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18303_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 371; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 54 - 440
Target Start/End: Original strand, 17768435 - 17768821
Alignment:
| Q |
54 |
cttcaaggtacatgcaatgcgaacaaaaagcttgacttatgcaaagaaagtacgtataggagtcaaaactcaataatcatcccagttaaaccattgtcct |
153 |
Q |
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| T |
17768435 |
cttcaaggtacatgcaatgcgaataaaaagcttgacttatgcaaagaaagtacgtataggagtcaaaactcaataatcatcccagttaaaccattgtcct |
17768534 |
T |
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| Q |
154 |
taataacacattttgcacatcaaaattacttccacgaaacttatatatgcaggtaagtgcccacttaagatcatgattattcccttcatgcagttctcac |
253 |
Q |
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| T |
17768535 |
taataacacattttgcacatcaaaattacttccacgaaacttatatatgcaggtaagtgccctcttaagatcatgattattcccttcatgcagttctcac |
17768634 |
T |
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| Q |
254 |
atgtttccaaggaacttcaactttatttgaatacattttacacacaaaatgatggaaatttaaaaaataattaattcagcatctgaaagtttaacaacag |
353 |
Q |
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| T |
17768635 |
atgtttccaaggaacttcaaatttatttgaatactttttacacacaaaatgatggaaatttaaaaaataattaattcagcatctgaaagtttaacaacag |
17768734 |
T |
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| Q |
354 |
aaccatacctcctctgataaatagaactgctttccgtaaaataaacatttccttccgaatcaacatcgacatcgttagtgaatctta |
440 |
Q |
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| T |
17768735 |
aaccatacctcctctgataaatagaactgctttccgtaaaataaacatttccttccgaatcaacatcgacatcgttagtgaatctta |
17768821 |
T |
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