View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18303_low_9 (Length: 287)
Name: NF18303_low_9
Description: NF18303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18303_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 10 - 269
Target Start/End: Complemental strand, 46367479 - 46367220
Alignment:
| Q |
10 |
ataggtagagagaatgcatttccattattttttaaagagatataaagattgtatacatgtttgacacaaggcatatacatattgttatataactgagggc |
109 |
Q |
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| T |
46367479 |
atagatagagagaatgcatttccattattttttaaagagatataaagattgtatacatgtttgacacaaggcatatacatattgttatataactgagggc |
46367380 |
T |
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| Q |
110 |
attgaacccagcactaacagtgcgtgacgccaggaccacactacacaattccatacactctttcctgaacgttgagaaatcgaagcgaacagataccaac |
209 |
Q |
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| T |
46367379 |
attgaacccagcactaacagtgcgtgacgccaggaccacactacacaattccatacactctttcctgaacgttgagaaatcgaagcgaacagataccaac |
46367280 |
T |
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| Q |
210 |
tgggagaatttgatcagaaaattaaagtttgtgaggtgaggaccattttcatactagtac |
269 |
Q |
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| T |
46367279 |
tgggagaatttgatcagaaaattaaagtttgtgaggtgaggaccattttcatactagtac |
46367220 |
T |
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