View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18304_high_24 (Length: 250)
Name: NF18304_high_24
Description: NF18304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18304_high_24 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 18842089 - 18841852
Alignment:
| Q |
13 |
aatatgcaagatcaattcctttgtttctggcattaaaatgtactttttgacaattgtaaatgtgttttcaacagaaagcttgaagaaacttcttcccttg |
112 |
Q |
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| T |
18842089 |
aatatgcaagatcaattcctttgtttctggcattaaaatgtactttttgacaattttaaatgtgttttcaacagaaagcttgaagaaacttcttcccttg |
18841990 |
T |
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| Q |
113 |
tttactttatagtccaatcctaaacaacctacaagctaaaactatcatcttacaagtttttatgtcatagtaaattgtgttgcattgagctcttaaaaca |
212 |
Q |
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| T |
18841989 |
tttactttatagtcctatcctaaacaacctacaagctaaaactatcatcttacaagtttttatgtcatagtaaattttgttgcattgagctcttaaaaca |
18841890 |
T |
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| Q |
213 |
tgttgtgtactatacgagattttaaccaatgttgtgaa |
250 |
Q |
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| T |
18841889 |
tgttgtgtactatacgagattttaaccaatgttgtgaa |
18841852 |
T |
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