View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18306_high_18 (Length: 289)
Name: NF18306_high_18
Description: NF18306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18306_high_18 |
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Alignment Details
Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 24828079 - 24828359
Alignment:
| Q |
1 |
ttaatcatttctcaggttcaattcctttggaatatgttgaattgcataatctagagattttggagttgcaagaaaattatttggatggtgaaattccacc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24828079 |
ttaatcatttctcaggttcaattcctttggaatatgttgaattgtataatctagatattttggagttgcaagaaaattatttggatggtgaaattccacc |
24828178 |
T |
|
| Q |
101 |
ttttgatcaaccatcattgataagtttcaatgtgtcatataatcatttggtagggaaaattcctgaaacttctttgcttcaaaggtttccaaagagttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24828179 |
ttttgatcaaccatcattgataagtttcaatgtgtcatataatcatttggtagggaaaattcctgaaacttctttgcttcaaaggtttccaaagagttct |
24828278 |
T |
|
| Q |
201 |
tttgatgataattctgatctttgtggaaaaccattggataagtcatgttctgctgaatctcctgcaccacttccctttgct |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
24828279 |
tttgatgataattctgatctttgtggaaaaccattggataagtcatgttctgctgaatctcctgcaccacttccttttgct |
24828359 |
T |
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