View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18306_high_9 (Length: 431)
Name: NF18306_high_9
Description: NF18306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18306_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 12 - 415
Target Start/End: Original strand, 36961080 - 36961483
Alignment:
| Q |
12 |
agagaagaaagtgaatcagaatcaaggtcaatataacagcaaaaactctgcagctagtgatcttcataataagttgagaaaggtttaagcagaaaacatg |
111 |
Q |
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| T |
36961080 |
agagaagaaagtgaatcagaatcaaggtcaatataacagcaaaaactctgcagctagtgatcttcataataagttgagaaaggtttaagcagaaaacatg |
36961179 |
T |
|
| Q |
112 |
ctaagatgaaagaagggttgaatacttagcttggatcaggtttatataaaatgaaaaaagagtggagcatgccttttccacgtggttaaccatacttaat |
211 |
Q |
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| T |
36961180 |
ctaagatgaaagaagggttgaatacttagcttggatcaggtttatataaaatgaaaaaagagtggagcatgccttttccacgtggttaaccatacttaat |
36961279 |
T |
|
| Q |
212 |
taaaaggaaacaaaaggtagctatacttaattaatcatcagtgttagttttcagttaatgataagactaatgttaaattttcagcattaacaagaatgtg |
311 |
Q |
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| T |
36961280 |
taaaaggaaacaaaaggtagctatacttaattaatcatcagtgttagttttcagttaatgataagactaatgttaaattttcagcattaacaagaatgtg |
36961379 |
T |
|
| Q |
312 |
aaggaaagaaaaatgcatagtacttttttacattgaagactaatttactaggttgaaacctggtaggtgtggatcatgtgacacatgattttatagagat |
411 |
Q |
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| T |
36961380 |
aaggaaagaaaaatgcatagtacttttttacattgaagactaatttactaggttgaaacctggtaggtgtggatcgtgtgacacatgattttatagagat |
36961479 |
T |
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| Q |
412 |
tcat |
415 |
Q |
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| T |
36961480 |
tcat |
36961483 |
T |
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