View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18306_low_10 (Length: 413)
Name: NF18306_low_10
Description: NF18306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18306_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 7 - 398
Target Start/End: Original strand, 34409801 - 34410192
Alignment:
| Q |
7 |
gtgagatgaatatctgagttttccttgtaagacataccatttgtttgtttccctttacaacttccattataaatcaaatcactacccttacccttttctc |
106 |
Q |
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| T |
34409801 |
gtgatatgaatatctgagttttccttgtgagacataccatttgtttgtttccctttacaacttccattataaatcaaatcactacccttacccttttctc |
34409900 |
T |
|
| Q |
107 |
aagtcacctcattcgttagcgaaaacagcatgccaaatggatctgcaccaaaaaatagtttagacattgtaggaatcattgtctgaatctcacaagtcct |
206 |
Q |
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| T |
34409901 |
aagtcacctcattcgttagcgaaaacagcatgccaaatggatctgcaccaaaaaatagtttagacattgtaggaatcattgtctgaatctcacaagtcct |
34410000 |
T |
|
| Q |
207 |
caagtttctgtgatgtgactaaagagttaaataaatttctgatttgtttctatttcttgtgtatttcaaaaatcaaagcatgacacagatatgtaaatat |
306 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34410001 |
caagtttctgtgatgtgactaaagagttcaataaatttctgatttgtttctatttcttgtgtatttcaaaaatcaaagcatgacacagatatgtaaatat |
34410100 |
T |
|
| Q |
307 |
ttacagaagtttttgttcattgattatttaggacatacaagtcataagttgttttgtatgtacatagagatcaaaacaaacatcaaaatggt |
398 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
34410101 |
ttacagaagtttttgttcattgattatttaggacatacaagtcataagttgttttgtatgtacatagagaccaaaacaaacatcaaaatggt |
34410192 |
T |
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