View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18307_low_6 (Length: 342)
Name: NF18307_low_6
Description: NF18307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18307_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 28 - 327
Target Start/End: Original strand, 10978454 - 10978754
Alignment:
| Q |
28 |
acatgaacatgaacatgaacacatctcaggtccatcgaatcccatgattcccatgtgtttttattaccacatatctgtaatacaaaatgcatagaaagac |
127 |
Q |
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| T |
10978454 |
acatggacatgaacatgaacacatctcaggtccatcgaatcccatgattcccatgtgtttttattaccacatatctgtaatacaaaatacatagaaagac |
10978553 |
T |
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| Q |
128 |
aactttgaaaacaaaagtagatctcaacctcatatttaatgggatactatgctttttcagccaccatgtcccactagaaggacatgacaatgctatcagc |
227 |
Q |
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| T |
10978554 |
aactttgaaaacaaaagtagatctcaacctcatatttaatggtataccatgctttttcagccaccatgtcccactagaaggacatgacaatgctatcagc |
10978653 |
T |
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| Q |
228 |
tcaaaatattagaaggaaaagtccaatatctttatggtttgtagtggttgagatgtgtaaacagaatctgtcc-aaaaaattaagaattagctatactta |
326 |
Q |
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| T |
10978654 |
tcaaaatattagaaggaaaagtccaatatctttatggtttgtagtggttgagatgtgtaaacagaatctgtccaaaaaaattaagaattagctatactta |
10978753 |
T |
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| Q |
327 |
t |
327 |
Q |
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| T |
10978754 |
t |
10978754 |
T |
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