View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1830_high_11 (Length: 282)

Name: NF1830_high_11
Description: NF1830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1830_high_11
NF1830_high_11
[»] chr8 (35 HSPs)
chr8 (1-193)||(6354726-6354922)
chr8 (135-186)||(36366110-36366161)
chr8 (128-186)||(12958780-12958838)
chr8 (135-188)||(24915253-24915306)
chr8 (130-186)||(10839769-10839825)
chr8 (135-186)||(35011223-35011274)
chr8 (135-186)||(44796353-44796404)
chr8 (138-187)||(10184636-10184685)
chr8 (139-188)||(16448873-16448922)
chr8 (126-187)||(34711083-34711144)
chr8 (135-187)||(7693118-7693170)
chr8 (134-182)||(15726849-15726897)
chr8 (138-186)||(42786378-42786426)
chr8 (135-186)||(6899431-6899482)
chr8 (135-186)||(22429546-22429597)
chr8 (135-186)||(24177983-24178034)
chr8 (141-188)||(38298585-38298632)
chr8 (141-188)||(43932133-43932180)
chr8 (134-188)||(8453678-8453732)
chr8 (130-187)||(13831445-13831503)
chr8 (139-193)||(14578514-14578568)
chr8 (135-188)||(5031475-5031528)
chr8 (138-187)||(6354662-6354710)
chr8 (130-187)||(7693039-7693096)
chr8 (143-188)||(24599753-24599798)
chr8 (138-187)||(24915184-24915233)
chr8 (135-187)||(6899504-6899556)
chr8 (135-187)||(8793804-8793856)
chr8 (135-187)||(12958860-12958912)
chr8 (135-187)||(15720210-15720262)
chr8 (135-187)||(22429619-22429671)
chr8 (135-187)||(24822808-24822860)
chr8 (135-183)||(32575182-32575230)
chr8 (135-187)||(40483294-40483346)
chr8 (135-187)||(44796426-44796478)
[»] scaffold0110 (1 HSPs)
scaffold0110 (138-187)||(1617-1666)
[»] chr5 (24 HSPs)
chr5 (135-188)||(27488358-27488411)
chr5 (138-187)||(11142448-11142497)
chr5 (135-188)||(15968322-15968375)
chr5 (134-186)||(38394438-38394490)
chr5 (135-186)||(22731344-22731395)
chr5 (139-188)||(35349497-35349546)
chr5 (135-187)||(29299368-29299420)
chr5 (130-186)||(36286065-36286121)
chr5 (139-190)||(28499793-28499844)
chr5 (135-186)||(29031122-29031173)
chr5 (138-188)||(1138301-1138351)
chr5 (138-180)||(8235469-8235511)
chr5 (135-189)||(12115087-12115141)
chr5 (138-188)||(36434762-36434812)
chr5 (137-186)||(1015241-1015290)
chr5 (138-186)||(26327549-26327598)
chr5 (135-187)||(1015167-1015219)
chr5 (135-187)||(1138229-1138281)
chr5 (123-187)||(6499980-6500044)
chr5 (135-187)||(15968395-15968447)
chr5 (135-187)||(22731270-22731322)
chr5 (135-179)||(26163972-26164016)
chr5 (138-190)||(35463963-35464015)
chr5 (135-187)||(36417132-36417184)
[»] chr2 (65 HSPs)
chr2 (135-188)||(20555269-20555322)
chr2 (137-188)||(11030276-11030327)
chr2 (135-186)||(45571041-45571092)
chr2 (135-186)||(45574708-45574759)
chr2 (135-186)||(45578375-45578426)
chr2 (135-186)||(45582042-45582093)
chr2 (135-186)||(45585709-45585760)
chr2 (135-186)||(45589376-45589427)
chr2 (135-186)||(45593043-45593094)
chr2 (135-186)||(45596710-45596761)
chr2 (135-186)||(45600377-45600428)
chr2 (135-186)||(45604044-45604095)
chr2 (135-186)||(45607711-45607762)
chr2 (135-186)||(45611378-45611429)
chr2 (135-186)||(45615045-45615096)
chr2 (142-188)||(7833300-7833346)
chr2 (137-186)||(4063285-4063334)
chr2 (134-187)||(43135042-43135094)
chr2 (135-187)||(12486077-12486129)
chr2 (141-188)||(4755479-4755526)
chr2 (135-186)||(45034409-45034460)
chr2 (135-188)||(7943523-7943577)
chr2 (136-186)||(11794461-11794511)
chr2 (122-187)||(5559598-5559663)
chr2 (134-187)||(41153196-41153249)
chr2 (132-180)||(3365367-3365415)
chr2 (135-187)||(5109374-5109426)
chr2 (135-187)||(41205575-41205627)
chr2 (135-186)||(4044660-4044711)
chr2 (139-186)||(15384442-15384489)
chr2 (140-187)||(31943651-31943698)
chr2 (141-180)||(44283625-44283664)
chr2 (133-187)||(7256408-7256462)
chr2 (138-188)||(9152463-9152513)
chr2 (159-189)||(20218625-20218655)
chr2 (139-193)||(27279498-27279552)
chr2 (130-187)||(3838424-3838481)
chr2 (137-186)||(3838503-3838552)
chr2 (134-187)||(4044585-4044638)
chr2 (138-183)||(9121279-9121324)
chr2 (135-188)||(37076229-37076282)
chr2 (135-188)||(38983083-38983136)
chr2 (138-187)||(43713988-43714037)
chr2 (135-187)||(3037810-3037862)
chr2 (135-187)||(4063356-4063408)
chr2 (138-186)||(5559377-5559425)
chr2 (135-187)||(15384511-15384563)
chr2 (123-187)||(28249018-28249082)
chr2 (135-187)||(32457224-32457276)
chr2 (153-193)||(36452468-36452508)
chr2 (148-180)||(41119974-41120006)
chr2 (135-187)||(45034482-45034534)
chr2 (135-187)||(45571114-45571166)
chr2 (135-187)||(45574781-45574833)
chr2 (135-187)||(45578448-45578500)
chr2 (135-187)||(45582115-45582167)
chr2 (135-187)||(45585782-45585834)
chr2 (135-187)||(45589449-45589501)
chr2 (135-187)||(45593116-45593168)
chr2 (135-187)||(45596783-45596835)
chr2 (135-187)||(45600450-45600502)
chr2 (135-187)||(45604117-45604169)
chr2 (135-187)||(45607784-45607836)
chr2 (135-187)||(45611451-45611503)
chr2 (135-187)||(45615118-45615170)
[»] chr3 (27 HSPs)
chr3 (137-188)||(49885392-49885443)
chr3 (135-188)||(45010834-45010887)
chr3 (135-186)||(5177851-5177902)
chr3 (135-187)||(12747782-12747834)
chr3 (135-187)||(33371945-33371997)
chr3 (135-193)||(27108550-27108609)
chr3 (134-188)||(43448968-43449022)
chr3 (138-187)||(8987743-8987792)
chr3 (134-187)||(51723388-51723441)
chr3 (135-187)||(19649664-19649716)
chr3 (135-187)||(48593227-48593279)
chr3 (145-187)||(4980069-4980111)
chr3 (158-188)||(19996070-19996100)
chr3 (142-188)||(44664200-44664246)
chr3 (138-188)||(52864965-52865015)
chr3 (134-188)||(54537453-54537507)
chr3 (138-187)||(28043451-28043500)
chr3 (140-193)||(29290794-29290847)
chr3 (130-187)||(29457846-29457903)
chr3 (137-186)||(29457925-29457974)
chr3 (159-188)||(32711286-32711315)
chr3 (139-188)||(42225577-42225626)
chr3 (134-187)||(43449043-43449096)
chr3 (135-187)||(379081-379133)
chr3 (135-187)||(28406478-28406530)
chr3 (138-186)||(33371875-33371923)
chr3 (135-187)||(33808395-33808446)
[»] chr1 (37 HSPs)
chr1 (135-188)||(49944844-49944897)
chr1 (126-187)||(15343022-15343083)
chr1 (134-187)||(34146889-34146942)
chr1 (135-188)||(38738015-38738068)
chr1 (123-187)||(49184238-49184302)
chr1 (135-186)||(43929431-43929482)
chr1 (138-189)||(45848953-45849004)
chr1 (134-188)||(519917-519971)
chr1 (138-188)||(44939150-44939200)
chr1 (138-187)||(25021245-25021294)
chr1 (137-190)||(25021313-25021366)
chr1 (135-188)||(38040360-38040413)
chr1 (138-190)||(5368852-5368904)
chr1 (138-186)||(6793608-6793656)
chr1 (136-188)||(23923406-23923458)
chr1 (135-187)||(50155383-50155435)
chr1 (128-183)||(26823141-26823196)
chr1 (139-190)||(34890264-34890315)
chr1 (135-186)||(47678341-47678392)
chr1 (135-186)||(47844545-47844596)
chr1 (140-185)||(11386170-11386216)
chr1 (137-188)||(38590150-38590203)
chr1 (142-187)||(1811276-1811321)
chr1 (135-188)||(7375553-7375606)
chr1 (138-187)||(8971242-8971291)
chr1 (138-187)||(15285521-15285570)
chr1 (135-188)||(24305749-24305802)
chr1 (135-188)||(29892214-29892267)
chr1 (137-186)||(33018254-33018303)
chr1 (137-186)||(34662695-34662744)
chr1 (152-193)||(50105684-50105725)
chr1 (135-187)||(26760184-26760236)
chr1 (135-187)||(26924298-26924350)
chr1 (135-187)||(28359007-28359059)
chr1 (145-185)||(35533569-35533609)
chr1 (135-187)||(37515175-37515227)
chr1 (135-187)||(47678267-47678319)
[»] chr4 (43 HSPs)
chr4 (135-187)||(30191907-30191959)
chr4 (135-186)||(3043803-3043854)
chr4 (135-186)||(20745417-20745468)
chr4 (141-188)||(24100776-24100823)
chr4 (141-188)||(24100888-24100935)
chr4 (137-187)||(43117939-43117989)
chr4 (130-187)||(21554193-21554250)
chr4 (137-190)||(26066382-26066435)
chr4 (135-188)||(41116573-41116626)
chr4 (135-188)||(55190750-55190803)
chr4 (135-187)||(45828500-45828552)
chr4 (135-187)||(53225729-53225781)
chr4 (135-186)||(2643619-2643670)
chr4 (135-186)||(20459326-20459377)
chr4 (141-188)||(27587330-27587377)
chr4 (135-186)||(42804267-42804318)
chr4 (135-186)||(43020767-43020818)
chr4 (135-186)||(47866047-47866098)
chr4 (137-183)||(16412247-16412293)
chr4 (135-187)||(42169128-42169180)
chr4 (135-187)||(48361063-48361115)
chr4 (135-186)||(20956901-20956952)
chr4 (141-188)||(36196449-36196496)
chr4 (137-187)||(3043876-3043926)
chr4 (143-193)||(3345396-3345446)
chr4 (141-187)||(29686485-29686531)
chr4 (141-187)||(32645575-32645621)
chr4 (137-187)||(34226400-34226450)
chr4 (138-188)||(44111829-44111879)
chr4 (130-187)||(36132641-36132698)
chr4 (135-188)||(48195901-48195954)
chr4 (134-187)||(55292197-55292250)
chr4 (159-187)||(1140900-1140928)
chr4 (135-187)||(4698708-4698760)
chr4 (135-187)||(8347656-8347708)
chr4 (135-183)||(8826779-8826827)
chr4 (135-187)||(20459252-20459304)
chr4 (134-186)||(27841842-27841893)
chr4 (135-187)||(37991497-37991549)
chr4 (139-187)||(39993123-39993171)
chr4 (135-187)||(43020840-43020892)
chr4 (135-187)||(47866120-47866172)
chr4 (134-186)||(48373428-48373480)
[»] chr7 (26 HSPs)
chr7 (128-187)||(31903035-31903094)
chr7 (135-188)||(8566165-8566218)
chr7 (135-188)||(36245460-36245513)
chr7 (138-187)||(41850610-41850659)
chr7 (130-186)||(4826768-4826824)
chr7 (139-183)||(32811798-32811842)
chr7 (135-186)||(27231919-27231970)
chr7 (135-186)||(32811463-32811514)
chr7 (134-188)||(28677401-28677455)
chr7 (138-187)||(31227507-31227556)
chr7 (134-187)||(32811388-32811441)
chr7 (135-187)||(28020012-28020064)
chr7 (141-188)||(45123329-45123376)
chr7 (133-187)||(31227577-31227631)
chr7 (135-188)||(10007660-10007713)
chr7 (135-188)||(11668099-11668152)
chr7 (142-187)||(16861530-16861575)
chr7 (135-188)||(30869270-30869323)
chr7 (135-188)||(40142857-40142910)
chr7 (135-187)||(1366606-1366658)
chr7 (138-186)||(1366680-1366728)
chr7 (139-187)||(2610202-2610250)
chr7 (135-187)||(4826846-4826898)
chr7 (135-187)||(29365706-29365758)
chr7 (159-187)||(40362005-40362033)
chr7 (140-188)||(45441520-45441568)
[»] chr6 (15 HSPs)
chr6 (138-187)||(7649813-7649862)
chr6 (135-186)||(2810090-2810141)
chr6 (136-186)||(1837045-1837095)
chr6 (135-187)||(1158330-1158382)
chr6 (135-187)||(10283379-10283431)
chr6 (139-187)||(12450366-12450414)
chr6 (148-188)||(33128849-33128889)
chr6 (137-188)||(3064896-3064947)
chr6 (141-188)||(9343137-9343184)
chr6 (135-187)||(766512-766564)
chr6 (135-187)||(2810163-2810215)
chr6 (134-178)||(2937090-2937134)
chr6 (138-183)||(7649888-7649935)
chr6 (134-186)||(8646764-8646816)
chr6 (135-187)||(28630838-28630890)
[»] scaffold0242 (1 HSPs)
scaffold0242 (130-186)||(16513-16569)
[»] scaffold0027 (1 HSPs)
scaffold0027 (141-187)||(5499-5545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (159-187)||(423333-423361)


Alignment Details
Target: chr8 (Bit Score: 124; Significance: 8e-64; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 6354922 - 6354726
Alignment:
Q  1 tctttgcttagactcttttaccaaaacattgtgtg-----gcataagtgacaaacatttgtacgtggaggatatctctggtttaacaacaaaatattgag 95  Q
    ||||| ||||||||||||||||  |||||||||||      ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6354922 tctttacttagactcttttacc--aacattgtgtgacataacataagtgacagacatttgcacgtggaggatatctctgatttaacaacaaaatattgag 6354825  T
Q  96 gagtttta-ttttttaagcaataaatgttatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtatccgatc 193  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6354824 gagttttatttttttaagcaataaatattacttcatccaatcctatttataagaaataattaattttttagattcattgaataatttatgtattcgatc 6354726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 36366161 - 36366110
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  36366161 tcctatttataagaaaaagttaattttttagattcattcaataattgatgta 36366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 12958780 - 12958838
Alignment:
Q  128 catccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||| ||||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  12958780 catccgatcctatttataagaaaaagttaactttttagattcattcaataattgatgta 12958838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 24915306 - 24915253
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  24915306 tcctatttatatgaaaaaattaactttttagattcattaaataattgatgtatc 24915253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 10839769 - 10839825
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||| |||||||||||||||| |||| | |||||||||||||||||||||| |||||    
T  10839769 tccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgta 10839825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 35011223 - 35011274
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  35011223 tcctatttataagaaaaagttaattttttagattcattcaataattaatgta 35011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 44796353 - 44796404
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  44796353 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 44796404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 10184685 - 10184636
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||||||    
T  10184685 tatttataagaaaaaatcgactttttagattcattgaataattgatgtat 10184636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 16448922 - 16448873
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatc 16448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 34711083 - 34711144
Alignment:
Q  126 ttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||| || ||||||||| ||| |||| | |||||||||||||||| ||||||||||||    
T  34711083 ttcatccagtcttatttataaaaaaaaattgactttttagattcattgagtaattgatgtat 34711144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 7693170 - 7693118
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | |||||||||||||||| ||||| ||||||    
T  7693170 tcctatttataagaaaaaattgactttttagattcattgagtaattaatgtat 7693118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 15726897 - 15726849
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattga 182  Q
    ||||||||||||||||| |||| | |||||||||||||||| |||||||    
T  15726897 atcctatttataagaaaaaattgactttttagattcattgagtaattga 15726849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 42786378 - 42786426
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  42786378 tatttataagaaaaagttaactttttagattcattcaataattgatgta 42786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 6899431 - 6899482
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  6899431 tcctatttataagaaaaatttaacttttgagattcattcaataattgatgta 6899482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 22429546 - 22429597
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||| ||| ||||||| |||||    
T  22429546 tcctatttataagaaaaagttaattttttagatttattcaataattaatgta 22429597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 24177983 - 24178034
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||| ||||||||    
T  24177983 tcctatttataagaaaaagttaactttttagattcattcaatatttgatgta 24178034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 38298632 - 38298585
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||| |||| ||||||||| |||||||||||||| |||||||    
T  38298632 ttataagaaacaattgattttttaggttcattgaataattaatgtatc 38298585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 43932180 - 43932133
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||| |||| | |||||||||||||||||||||| |||||||    
T  43932180 ttataagaaacaattgactttttagattcattgaataattaatgtatc 43932133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 8453732 - 8453678
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| | || ||||||||||| |||||| |||||||| ||||    
T  8453732 atcctatttataagaaaaatttgattttttagatacattgagtaattgatatatc 8453678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 13831503 - 13831445
Alignment:
Q  130 tccaatcctatttataagaaataa-ttaattttttagattcattgaataattgatgtat 187  Q
    |||| |||||||||||||||| || || | |||||||||||||| ||||||||||||||    
T  13831503 tccagtcctatttataagaaaaaaattgactttttagattcattaaataattgatgtat 13831445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 14578514 - 14578568
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatccgatc 193  Q
    ||||||||| || ||||||| |||||| |||||||||||||| ||||||| ||||    
T  14578514 atttataagcaaaaattaatattttaggttcattgaataattaatgtatctgatc 14578568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 5031475 - 5031528
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | |||| |||||| ||||||| | |||||||||||||    
T  5031475 tcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatc 5031528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 6354662 - 6354710
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  6354662 tatttataagaaataatgaatttttt-gatttattgaataattaatgtat 6354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 7693039 - 7693096
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||||||| | || | ||||| ||||||||| |||| ||||||||    
T  7693039 tccaatcctatttataagaaacattttacttttttgattcattgcataaatgatgtat 7693096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 24599798 - 24599753
Alignment:
Q  143 ataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||| |||| ||||||||||||||||| |||| |||||||||    
T  24599798 ataagaaacaattgattttttagattcattgtataactgatgtatc 24599753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 24915184 - 24915233
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||| || |||| ||||||| |||||||| ||||||||||||||    
T  24915184 tatttataagtaacaatttatttttttgattcattaaataattgatgtat 24915233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 6899556 - 6899504
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  6899556 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 6899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8793856 - 8793804
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||||| || | ||||| ||||||||| |||| ||||||||    
T  8793856 tcctatttataagaaatatttgacttttttgattcattgcataaatgatgtat 8793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 12958912 - 12958860
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  12958912 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 12958860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 15720210 - 15720262
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||||| |||||||| | || || ||||||||||||    
T  15720210 tcctatttataagaaaaaattaactttttagacttatagagtaattgatgtat 15720262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 22429671 - 22429619
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  22429671 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 22429619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 24822860 - 24822808
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | |||||||||| |||| |||||| ||||||    
T  24822860 tcctatttataagaaaaaattgactttttagatttattgtataattaatgtat 24822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 32575182 - 32575230
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgat 183  Q
    ||||||||| |||||| | |||| |||||||||||||| ||||||||||    
T  32575182 tcctatttacaagaaaaagttaactttttagattcattcaataattgat 32575230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 40483294 - 40483346
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||||| |||| |||||  |||||||| |||| ||||||||    
T  40483294 tcctatttataagaaatatttaacttttttaattcattgcataaatgatgtat 40483346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 44796478 - 44796426
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  44796478 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 44796426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 1666 - 1617
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1666 tatttataagaaaaaattaattttttagattcattgaataattgatgtat 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 27488358 - 27488411
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27488358 tcctatttataagaaaaaattaattttttagattcattcaataattgatgtatc 27488411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 11142497 - 11142448
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  11142497 tatttataagaaacaattcatttttttgattcattgaataattgatgtat 11142448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 15968322 - 15968375
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||||    
T  15968322 tcctatttataagaaaaagttaattttttagattcattcaataattaatgtatc 15968375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 38394438 - 38394490
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||| |||||    
T  38394438 atcctatttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 22731395 - 22731344
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  22731395 tcctatttataagaaaaagttaattttttagattcattaaataattaatgta 22731344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 35349546 - 35349497
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||| |||||||| | |||||||||||||||| |||||||||||||    
T  35349546 atttataaaaaataattgactttttagattcattgagtaattgatgtatc 35349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 29299368 - 29299420
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || |||||||||||||||||| | ||||||||||    
T  29299368 tcctatttataagaaaaatttgattttttagattcattgagtgattgatgtat 29299420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 36286065 - 36286121
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||| |||||||||||||||| || ||||||| ||||||||| |||| |||||||    
T  36286065 tccaattctatttataagaaatacttgatttttttgattcattgcataaatgatgta 36286121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 28499793 - 28499844
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatccg 190  Q
    ||||||||| || || |||||||||||||||||||||||| | |||||||||    
T  28499793 atttataagcaaaaaataattttttagattcattgaataactaatgtatccg 28499844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 29031173 - 29031122
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| || ||||||||||    
T  29031173 tcctatttataagaaaaagttaactttttagattcattcaacaattgatgta 29031122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 1138351 - 1138301
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||| |||| |||||||| ||||||| ||||||| |||||||    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatc 1138301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 8235511 - 8235469
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataatt 180  Q
    ||||||||||||| |||| |||||||||||| |||||||||||    
T  8235511 tatttataagaaaaaattgattttttagatttattgaataatt 8235469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 12115141 - 12115087
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatcc 189  Q
    ||||||||||| |||| ||| ||||||||||||||||||  |||||| |||||||    
T  12115141 tcctatttataggaaacaatcaattttttagattcattgcttaattgttgtatcc 12115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 36434812 - 36434762
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||| | |||| |||||||||||||| | |||||||||||||    
T  36434812 tatttataagaaaaatttaactttttagattcattaagtaattgatgtatc 36434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 1015290 - 1015241
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||| | |||| |||||||||||||| |||||| ||||||    
T  1015290 ctatttataagaaaaagttaactttttagattcattcaataatcgatgta 1015241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 26327549 - 26327598
Alignment:
Q  138 tatttataagaaataa-ttaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||| || |||| |||||||||||||| |||||||||||||    
T  26327549 tatttataagaaaaaaattaactttttagattcattcaataattgatgta 26327598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 1015167 - 1015219
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  1015167 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 1015219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 1138229 - 1138281
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | ||||| |||| ||||||||||| ||||||    
T  1138229 tcctatttataagaaacaatttacttttttgatttattgaataattaatgtat 1138281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 6499980 - 6500044
Alignment:
Q  123 tatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||| |||| ||| ||||||||||||| |||| |  ||||||||| ||| ||||||||||||||    
T  6499980 tattttatccgatcatatttataagaaacaattgacattttagatttattaaataattgatgtat 6500044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 15968447 - 15968395
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  15968447 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 15968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 22731270 - 22731322
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  22731270 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 22731322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 26163972 - 26164016
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataat 179  Q
    |||||||||||||||| |||| | |||||||||| ||||||||||    
T  26163972 tcctatttataagaaacaattgactttttagatttattgaataat 26164016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 35463963 - 35464015
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatccg 190  Q
    |||||||||| || || ||||||||||| |||||||||||| | |||||||||    
T  35463963 tatttataagcaaaaaataattttttaggttcattgaataactaatgtatccg 35464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 36417184 - 36417132
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | ||||||||| |||| ||||||| ||||||    
T  36417184 tcctatttataagaaacaatttactttttagatacattaaataatttatgtat 36417132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 20555269 - 20555322
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20555269 tcctatttataagaaaaaattaattttttagatacattgaataattgatgtatc 20555322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 11030327 - 11030276
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  11030327 ctatttataagaaaaaattaactttttagattcattgagtaattgatgtatc 11030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45571041 - 45571092
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45571041 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45571092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45574708 - 45574759
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45574708 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45578375 - 45578426
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45578375 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45578426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45582042 - 45582093
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45582042 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45585709 - 45585760
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45585709 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45585760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45589376 - 45589427
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45589376 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45589427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45593043 - 45593094
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45593043 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45593094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45596710 - 45596761
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45596710 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45596761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45600377 - 45600428
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45600377 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45604044 - 45604095
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45604044 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45607711 - 45607762
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45607711 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45607762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45611378 - 45611429
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45611378 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45611429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45615045 - 45615096
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45615045 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45615096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 7833300 - 7833346
Alignment:
Q  142 tataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  7833300 tataagaaacaatcaattttttagattcattgaataattgatgtatc 7833346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 4063285 - 4063334
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  4063285 ctatttataagaaaaagttaattttttagattcattcaataattgatgta 4063334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 43135042 - 43135094
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  43135042 atcctatttataagaaa-aattaattttttagattcattaaataattgacgtat 43135094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 12486129 - 12486077
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||||| |||| | |||||||||||||||||||||||||||||    
T  12486129 tcctatttacaagaaacaattgactttttagattcattgaataattgatgtat 12486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 4755479 - 4755526
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  4755479 ttataagaaacaattaattttttagattcattaaataattaatgtatc 4755526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 45034409 - 45034460
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  45034409 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 45034460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 7943577 - 7943523
Alignment:
Q  135 tcctatttataagaaataa-ttaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  7943577 tcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatc 7943523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 11794461 - 11794511
Alignment:
Q  136 cctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||| |||||    
T  11794461 cctatttataagaaaaaattgattttttagatttattgaataattaatgta 11794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 5559663 - 5559598
Alignment:
Q  122 ttatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||| ||| ||||||||||||||| ||| || ||||||| ||||||||| |||| ||||||||    
T  5559663 ttatttcctccgatcctatttataagacatatttgatttttttgattcattgcataaatgatgtat 5559598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 41153249 - 41153196
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||| | || | |||||||||||||||| ||||||||||||    
T  41153249 atcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 41153196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 3365415 - 3365367
Alignment:
Q  132 caatcctatttataagaaataattaattttttagattcattgaataatt 180  Q
    |||||||  ||||||||||||||| ||||||| ||||||||||||||||    
T  3365415 caatccttattataagaaataattgatttttttgattcattgaataatt 3365367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 5109374 - 5109426
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | |||| |||||||||||||||| ||||| ||||||    
T  5109374 tcctatttataagaaaaagttaactttttagattcattgagtaattaatgtat 5109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 41205627 - 41205575
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||| ||||||||||||||||||  ||| ||||||| ||||||    
T  41205627 tcctatttataagagataattaattttttagatatattaaataatttatgtat 41205575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 4044711 - 4044660
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | | || |||||||||||||| |||||||||||||    
T  4044711 tcctatttataagaaaaagtaaaatttttagattcattcaataattgatgta 4044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 15384442 - 15384489
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||| |||||| |||||||||| ||| |||||||||||||    
T  15384442 atttataagaaaaaattaactttttagatttatttaataattgatgta 15384489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 31943698 - 31943651
Alignment:
Q  140 tttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||| |||||||||| | ||||||||||||||||| |||||||||||    
T  31943698 tttatgagaaataatttactttttagattcattgaacaattgatgtat 31943651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 44283664 - 44283625
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataatt 180  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  44283664 ttataagaaataattgactttttagattcattgaataatt 44283625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 7256462 - 7256408
Alignment:
Q  133 aatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| || ||||||||||||| |||||||||||| | ||||||||||| ||||    
T  7256462 aatccttttaataagaaataattcattttttagattaagtgaataattgacgtat 7256408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 9152513 - 9152463
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||| |||||| |||| | |||||||||||||||| |||||||||||||    
T  9152513 tatttacaagaaacaattgactttttagattcattgagtaattgatgtatc 9152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 20218655 - 20218625
Alignment:
Q  159 tttttagattcattgaataattgatgtatcc 189  Q
    |||||||||||||||||||||||||||||||    
T  20218655 tttttagattcattgaataattgatgtatcc 20218625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 27279498 - 27279552
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatccgatc 193  Q
    ||||||||| || || ||||||||||| |||||||||||| | ||||||||||||    
T  27279498 atttataagcaaaaaataattttttaggttcattgaataactaatgtatccgatc 27279552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 3838424 - 3838481
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||| |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  3838424 tccagtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 3838481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 3838552 - 3838503
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||| | |||| |||||||||||||| ||| |||||||||    
T  3838552 ctatttataagaaaaagttaactttttagattcattcaatgattgatgta 3838503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 4044585 - 4044638
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  4044585 atcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 4044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 9121324 - 9121279
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgat 183  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  9121324 tatttataataaacaattaattttttagattcataaaataattgat 9121279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 37076282 - 37076229
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| |||  | |||||||||| |||| ||||||||||||||    
T  37076282 tcctatttataagaaacaatcgactttttagatttattggataattgatgtatc 37076229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 38983136 - 38983083
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||| ||| | || |||||||||||||||||  |||||||||||||    
T  38983136 tcctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatc 38983083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 43713988 - 43714037
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| |||| ||||||| |||||||||||||| | ||||||    
T  43713988 tatttataagaaacaattgatttttttgattcattgaataaattatgtat 43714037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 3037862 - 3037810
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| || |||||| || | |||||||||||||||||||||||| ||||||    
T  3037862 tcctatatacaagaaacaaatgattttttagattcattgaataatttatgtat 3037810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 4063408 - 4063356
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  4063408 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 4063356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 5559377 - 5559425
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||| | || | |||||||||||||||| |||||||||||    
T  5559377 tatttataagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 15384563 - 15384511
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  15384563 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 15384511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 28249082 - 28249018
Alignment:
Q  123 tatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| |||| | |||||||||||||| | || | |||||||||||||| ||||||| ||||||    
T  28249082 tatttcctccagttctatttataagaaaaagttgactttttagattcattaaataattaatgtat 28249018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 32457224 - 32457276
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||||| || | ||||| ||||||||| |||| ||||||||    
T  32457224 tcctatttataagaaatatttgacttttttgattcattgcataaatgatgtat 32457276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 36452508 - 36452468
Alignment:
Q  153 attaattttttagattcattgaataattgatgtatccgatc 193  Q
    |||| |||| |||||||||||||||||||||||||| ||||    
T  36452508 attagttttctagattcattgaataattgatgtatctgatc 36452468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 41119974 - 41120006
Alignment:
Q  148 aaataattaattttttagattcattgaataatt 180  Q
    |||||||| ||||||||||||||||||||||||    
T  41119974 aaataattgattttttagattcattgaataatt 41120006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45034534 - 45034482
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45034534 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45034482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45571166 - 45571114
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45571166 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45571114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45574833 - 45574781
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45574833 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45578500 - 45578448
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45578500 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45582167 - 45582115
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45582167 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45582115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45585834 - 45585782
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45585834 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45585782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45589501 - 45589449
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45589501 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45589449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45593168 - 45593116
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45593168 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45593116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45596835 - 45596783
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45596835 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45596783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45600502 - 45600450
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45600502 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45604169 - 45604117
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45604169 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45604117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45607836 - 45607784
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45607836 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45607784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45611503 - 45611451
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45611503 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45611451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45615170 - 45615118
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45615170 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45615118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 49885392 - 49885443
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  49885392 ctatttataagaaaaaattaattttttagattcattcaataattgatgtatc 49885443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 45010887 - 45010834
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  45010887 tcctatttataagagaaaattaattttttagatttattgaataattgatgtatc 45010834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 5177902 - 5177851
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  5177902 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 5177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 12747834 - 12747782
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  12747834 tcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtat 12747782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 33371997 - 33371945
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  33371997 tcctatatataagaaataatttatttttttgattcattgaatagttgatgtat 33371945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 27108609 - 27108550
Alignment:
Q  135 tcctatttataagaaat-aattaattttttagattcattgaataattgatgtatccgatc 193  Q
    |||||||||||| |||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  27108609 tcctatttataaaaaatcaattaattttttaaattcattaaataatttatgtatccgatc 27108550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 43448968 - 43449022
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| | || |||||||||||||||||| |||||||| ||||    
T  43448968 atcctatttataagaaaaagttgattttttagattcattgagtaattgatatatc 43449022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 8987743 - 8987792
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||||||||||||||||||| |||||||||| | ||||||    
T  8987743 tatttataataaataattaattttttagatgcattgaataacttatgtat 8987792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 51723388 - 51723441
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||| | || |||||||||||||||||| ||||| ||||||    
T  51723388 atcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat 51723441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 19649716 - 19649664
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||||| | || |||||||||||||||||| ||||||||||||    
T  19649716 tcctatttacaagaaacatttgattttttagattcattgagtaattgatgtat 19649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 48593279 - 48593227
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| || |||||| || |||||||||||||||||||||||||| ||||||    
T  48593279 tcctatatacaagaaacaagtaattttttagattcattgaataatttatgtat 48593227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 4980111 - 4980069
Alignment:
Q  145 aagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||| |||||||||||||||||||||| || |||||    
T  4980111 aagaaataattcattttttagattcattgaataactggtgtat 4980069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Original strand, 19996070 - 19996100
Alignment:
Q  158 ttttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||||||||||||||||||    
T  19996070 ttttttagattcattgaataattgatgtatc 19996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 44664200 - 44664246
Alignment:
Q  142 tataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  44664200 tataaaaaataattgattttttaggttcattgaataattaatgtatc 44664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 52864965 - 52865015
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||| ||||| | |||| |||||||||||||||| |||||||||||||    
T  52864965 tatttatgagaaaaatttaactttttagattcattgagtaattgatgtatc 52865015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 54537453 - 54537507
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| | || | |||| ||||||||||| |||||||||||||    
T  54537453 atcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatc 54537507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 28043500 - 28043451
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||  ||| ||| |||||||||||||||||||| ||||||    
T  28043500 tatttataagaaactattgattatttagattcattgaataattaatgtat 28043451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 29290794 - 29290847
Alignment:
Q  140 tttataagaaataattaattttttagattcattgaataattgatgtatccgatc 193  Q
    ||||||||||| |||| | ||||||||||||||||| || ||||||||| ||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatc 29290847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 29457846 - 29457903
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||| |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  29457846 tccagtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 29457903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 29457974 - 29457925
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||| | |||| |||||||||||||| ||| |||||||||    
T  29457974 ctatttataagaaaaagttaactttttagattcattcaatgattgatgta 29457925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 188
Target Start/End: Complemental strand, 32711315 - 32711286
Alignment:
Q  159 tttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||||||||||||||||    
T  32711315 tttttagattcattgaataattgatgtatc 32711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 42225577 - 42225626
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||| |||||| |||||||||||||||| |||||||||||  |||||||    
T  42225577 atttacaagaaaaaattaattttttagatacattgaataatgtatgtatc 42225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 43449096 - 43449043
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||||| || ||||||| | ||||||| |||| ||||||||    
T  43449096 atcctatttataagaaatatttgatttttttggttcattgtataaatgatgtat 43449043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 379081 - 379133
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||| | |||||||||||||||| |||| ||||||| ||||||    
T  379081 tcctatttacaagagacaattaattttttagatacattaaataatttatgtat 379133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 28406478 - 28406530
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||||| |||| | ||||||||||| |||||||||| ||||||    
T  28406478 tcctatttacaagaaacaattgactttttagattcgttgaataattaatgtat 28406530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 33371875 - 33371923
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||| | ||||||||||| ||| ||| |||||||||||||    
T  33371875 tatttataagaaaaagttaattttttaaatttattcaataattgatgta 33371923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 33808446 - 33808395
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | |||||| ||| ||||||||||||||||||    
T  33808446 tcctatttataagaaa-aattgactttttaaattaattgaataattgatgtat 33808395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 49944844 - 49944897
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  49944844 tcctatttataagaaaaatttaactttttagattcattgaataattgatgtatc 49944897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 15343083 - 15343022
Alignment:
Q  126 ttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||| ||||||||||||||||||| || ||||||| ||||||||| |||| ||||||||    
T  15343083 ttcatcctatcctatttataagaaatatttgatttttttgattcattgcataaatgatgtat 15343022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 34146942 - 34146889
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||    
T  34146942 atcctatttataagaaaaaattgatttttttgattcattgaataattaatgtat 34146889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 38738068 - 38738015
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  38738068 tcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatc 38738015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 49184238 - 49184302
Alignment:
Q  123 tatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| |||| |||||||||||| |||||||| |||||||| ||||||| ||||||| ||||||    
T  49184238 tatttcctccagtcctatttataaaaaataatttattttttaaattcatttaataattaatgtat 49184302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 43929482 - 43929431
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  43929482 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 45848953 - 45849004
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatcc 189  Q
    ||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    
T  45848953 tatttataagaaacaattaactttttatattcatttaataattgatgtatcc 45849004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 519971 - 519917
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||||||||||    
T  519971 atcctatttataagaaaattttaactttttagattcattgagtaattgatgtatc 519917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 44939200 - 44939150
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||| | |||| |||||||||||||||||| |||||||||||||    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatc 44939150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 25021245 - 25021294
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| || | | |||||||||||||||||||||||||||||    
T  25021245 tatttataagaaacaaatgactttttagattcattgaataattgatgtat 25021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 25021366 - 25021313
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtatccg 190  Q
    ||||||| |||||| |||| | |||||||||| |||||||||||||||||||||    
T  25021366 ctatttacaagaaacaattgactttttagatttattgaataattgatgtatccg 25021313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 38040413 - 38040360
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | || | |||||||||||||||| |||||||||||||    
T  38040413 tcctatttataagaaaaatttgactttttagattcattgattaattgatgtatc 38040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 5368904 - 5368852
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatccg 190  Q
    |||||||||| || |||||| ||||||||| |||||||||||| |||||||||    
T  5368904 tatttataagcaaaaattaactttttagatgcattgaataattaatgtatccg 5368852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 6793608 - 6793656
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||| | ||||||||||| ||||||||||||||| |||||    
T  6793608 tatttataagaaaaagttaattttttaaattcattgaataattaatgta 6793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 23923406 - 23923458
Alignment:
Q  136 cctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||| | || | ||||||||||| ||||||||||||||||||    
T  23923406 cctatttataagaaaaatttgaatttttagattcgttgaataattgatgtatc 23923458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 50155435 - 50155383
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || | |||||||||||||||| ||||||||||||    
T  50155435 tcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 50155383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 26823141 - 26823196
Alignment:
Q  128 catccaatcctatttataagaaataattaattttttagattcattgaataattgat 183  Q
    ||||| ||||||||||||| ||| |||||| |||||| ||| ||||||||||||||    
T  26823141 catccgatcctatttataataaaaaattaactttttaaatttattgaataattgat 26823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 34890315 - 34890264
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtatccg 190  Q
    |||||||||||| || || | ||||||||||||||||||||| |||||||||    
T  34890315 atttataagaaaaaaatactattttagattcattgaataattaatgtatccg 34890264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 47678392 - 47678341
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  47678392 tcctatttataagaaaaatttaacttttgagattcattcaataattgatgta 47678341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 47844545 - 47844596
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  47844545 tcctatttataagaaaaatttaacttttgagattcattcaataattgatgta 47844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 11386170 - 11386216
Alignment:
Q  140 tttataagaaataattaatttt-ttagattcattgaataattgatgt 185  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  11386170 tttataagaaaaaattgatttttttagattcattgaataattgatgt 11386216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 38590203 - 38590150
Alignment:
Q  137 ctatttataagaaataa--ttaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||| ||  |||| |||||||||||||||| |||||||||||||    
T  38590203 ctatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatc 38590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 1811321 - 1811276
Alignment:
Q  142 tataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| || |||| |||||||||||||||| ||||||||||||||    
T  1811321 tataagcaaaaattcattttttagattcattaaataattgatgtat 1811276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 7375606 - 7375553
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| |||| | |||||||||||||||  ||||| |||||||    
T  7375606 tcctatttataagaaaaaattgactttttagattcattgtgtaattaatgtatc 7375553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 8971242 - 8971291
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| |||||| || ||||||||||||| ||||| ||||||    
T  8971242 tatttataagaaaaaattaagttgttagattcattgagtaattaatgtat 8971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 15285570 - 15285521
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||| | | || |||||||||||| ||||||||||||||||||    
T  15285570 tatttataagagacacttgattttttagattgattgaataattgatgtat 15285521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 24305802 - 24305749
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||| |||||| | ||||||||||| ||| ||||| |||||||||||||    
T  24305802 tcctatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatc 24305749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 29892267 - 29892214
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||| |||| |||| | |||||||||||||| |||||||||| ||||    
T  29892267 tcctatttataggaaacaattgactttttagattcattcaataattgatatatc 29892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 33018254 - 33018303
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||| | || |||||||| |||||||| ||||||||||||    
T  33018254 ctatttataagaaacatttgattttttaaattcattgcataattgatgta 33018303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 34662695 - 34662744
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||| ||| | |||| |||||||||||||| |||||||||||||    
T  34662695 ctatttataaaaaaaagttaactttttagattcattcaataattgatgta 34662744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 50105684 - 50105725
Alignment:
Q  152 aattaattttttagattcattgaataattgatgtatccgatc 193  Q
    ||||||||||||||||||||||||||||  ||||||| ||||    
T  50105684 aattaattttttagattcattgaataatcaatgtatctgatc 50105725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 26760184 - 26760236
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || | ||||| |||||||||||||| ||||||||    
T  26760184 tcctatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26760236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 26924350 - 26924298
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || | ||||| |||||||||||||| ||||||||    
T  26924350 tcctatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26924298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 28359059 - 28359007
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| || | | |||||| ||||||||||||||| ||||||    
T  28359059 tcctatttataagaaaaaaatgaatttttaaattcattgaataattaatgtat 28359007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 35533569 - 35533609
Alignment:
Q  145 aagaaataattaattttttagattcattgaataattgatgt 185  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  35533569 aagaaattatttattttttagatttattgaataattgatgt 35533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 37515227 - 37515175
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | |||| |||||||||||||| | ||||| ||||||    
T  37515227 tcctatttataagaaaaatttaactttttagattcattaagtaattaatgtat 37515175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 47678267 - 47678319
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  47678267 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 47678319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 30191907 - 30191959
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  30191907 tcctatttataagaaaaaattgattttttagattcattgagtaattgatgtat 30191959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 3043803 - 3043854
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  3043803 tcctatttataagaaaaagttaattttttagattcattcaataattgatgta 3043854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 20745468 - 20745417
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  20745468 tcctatttataagaaaaagttaattttttagattcattcaataattgatgta 20745417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 24100776 - 24100823
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24100776 ttataagaaataattaactttttagattcattgaataattaatgtatc 24100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 24100935 - 24100888
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24100935 ttataagaaataattaactttttagattcattgaataattaatgtatc 24100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 43117989 - 43117939
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  43117989 ctatttataagaaaaaattgattttttacattcattgaataattgatgtat 43117939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 21554250 - 21554193
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||||| ||||||    
T  21554250 tccaatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat 21554193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 26066382 - 26066435
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtatccg 190  Q
    ||||||||||||||||||| | |||  |||||||||||||||||||||||||||    
T  26066382 ctatttataagaaataattgactttcaagattcattgaataattgatgtatccg 26066435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 41116573 - 41116626
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  41116573 tcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatc 41116626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 55190803 - 55190750
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| |||| |||||||| ||||||| |||||||||||||||    
T  55190803 tcctatttataagaaaaaattgattttttatattcattcaataattgatgtatc 55190750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45828552 - 45828500
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  45828552 tcctatttataagaaaaaattgattttttagattcattgagtaattaatgtat 45828500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 53225781 - 53225729
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | |||||||||||||||||||||| ||||||    
T  53225781 tcctatttataagaaaaaattgactttttagattcattgaataattaatgtat 53225729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 2643619 - 2643670
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| |||||    
T  2643619 tcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 20459377 - 20459326
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  20459377 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 20459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 27587377 - 27587330
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  27587377 ttataagaaataatttattttttaggttcattgaataattaatgtatc 27587330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 42804267 - 42804318
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  42804267 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 42804318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 43020767 - 43020818
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  43020767 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43020818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 47866047 - 47866098
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  47866047 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 47866098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 16412247 - 16412293
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgat 183  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||    
T  16412247 ctatttataagaaaaaattgactttttagattcattgaataattgat 16412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 42169180 - 42169128
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || | |||||||||| ||||||||||||||||||    
T  42169180 tcctatttataagaaaaatttgactttttagatttattgaataattgatgtat 42169128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 48361063 - 48361115
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || | |||||||||||||||| ||||||||||||    
T  48361063 tcctatttataagaaaaatttgactttttagattcattgagtaattgatgtat 48361115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 20956901 - 20956952
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||| |||   ||||||||||||||||||| |||||||||||||    
T  20956901 tcctatttataaaaaaatgttaattttttagattcattcaataattgatgta 20956952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 36196496 - 36196449
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||| |||| ||||||||||||||| |||||||| |||||||    
T  36196496 ttataagaaaaaattgattttttagattcatagaataattaatgtatc 36196449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 3043926 - 3043876
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||| ||||||||| |||| ||||||| ||||||||||||| |||||||||    
T  3043926 ctatatataagaaacaatttatttttttgattcattgaatagttgatgtat 3043876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 3345446 - 3345396
Alignment:
Q  143 ataagaaataattaattttttagattcattgaataattgatgtatccgatc 193  Q
    |||||| |||||| | ||||||| |||||||||||||||||||||| ||||    
T  3345446 ataagacataattcactttttaggttcattgaataattgatgtatctgatc 3345396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 29686531 - 29686485
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  29686531 ttataagaaacaattaattttttaaattcattgtataattaatgtat 29686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 32645621 - 32645575
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||| || || |||| ||||||||||||||||||||||||||||    
T  32645621 ttataagcaaaaaataatgttttagattcattgaataattgatgtat 32645575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 34226400 - 34226450
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||| ||| |||| | ||||| |||||||||||||||||||||||    
T  34226400 ctatttataataaacaatttacttttttgattcattgaataattgatgtat 34226450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 44111879 - 44111829
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||| | || | |||||||||||||||| |||||||||||||    
T  44111879 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatc 44111829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 36132641 - 36132698
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||| |||||||||||||||||| || | ||||| ||||||||| |||| ||||||||    
T  36132641 tccagtcctatttataagaaatatttgacttttttgattcattgtataaatgatgtat 36132698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 48195901 - 48195954
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| || ||| |||||| ||||||||| ||||||| |||||    
T  48195901 tcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatc 48195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 55292250 - 55292197
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||| |||||| |||| ||||||||||| |||| ||||||| ||||||    
T  55292250 atcctatttacaagaaacaatttattttttagatacattaaataatttatgtat 55292197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 1140900 - 1140928
Alignment:
Q  159 tttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||||||||||||||||    
T  1140900 tttttagattcattgaataattgatgtat 1140928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 4698760 - 4698708
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| || ||| |||| ||||||||||| |||||||||||| ||||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgtat 4698708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 8347656 - 8347708
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | || | |||||||||||||||| | ||||||||||    
T  8347656 tcctatttataagaaaaatttgactttttagattcattgagtgattgatgtat 8347708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 8826827 - 8826779
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgat 183  Q
    |||||||| || |||| |||| | |||||||||||||||||||||||||    
T  8826827 tcctatttgtatgaaaaaatttactttttagattcattgaataattgat 8826779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 20459252 - 20459304
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  20459252 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 20459304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 27841842 - 27841893
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||| ||| | ||||||||||||||||||| ||||||| |||||    
T  27841842 atcctatttataaaaaa-agttaattttttagattcattcaataattaatgta 27841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 37991497 - 37991549
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| | |||| ||||| ||||||||| |||| ||||||||    
T  37991497 tcctatttataagaaacatttaaattttttgattcattgtataaatgatgtat 37991549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 39993171 - 39993123
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| || || ||| |||||||||||||||||||||| ||||||    
T  39993171 atttataagtaaaaaataactttttagattcattgaataattaatgtat 39993123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 43020892 - 43020840
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  43020892 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 43020840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 47866172 - 47866120
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  47866172 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 47866120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 48373428 - 48373480
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||| |||||| |||| |||||| || |||||||||||||| |||||    
T  48373428 atcctatttacaagaaacaattgatttttgaggttcattgaataatttatgta 48373480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 31903094 - 31903035
Alignment:
Q  128 catccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||  |||||| |||||||||||||||||| |||||||||||||| ||||||    
T  31903094 catccaatccttattataaaaaataattaattttttaggttcattgaataattaatgtat 31903035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 8566218 - 8566165
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | || |||||||||||||||||| |||||||||||||    
T  8566218 tcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatc 8566165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 36245513 - 36245460
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| |||| | |||||||||||||||| |||||||||||||    
T  36245513 tcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatc 36245460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 41850610 - 41850659
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  41850610 tatttataagaaaaagttaattttttagattcattgaataattaatgtat 41850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 4826768 - 4826824
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||| |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  4826768 tccagtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 4826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 32811842 - 32811798
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgat 183  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||    
T  32811842 atttataagaaaaaattaattttttagattcattgagtaattgat 32811798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 27231970 - 27231919
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  27231970 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 27231919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 32811514 - 32811463
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||||||| | ||||||||||||||||||| | |||||||||||    
T  32811514 tcctatttataagaaaaagttaattttttagattcattcagtaattgatgta 32811463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 28677455 - 28677401
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| |||| | |||||||||| ||||| |||||||||||||    
T  28677455 atcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatc 28677401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 31227507 - 31227556
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| | ||||||||||||||||||| |||| |||||||||    
T  31227507 tatttataagaaaaagttaattttttagattcattcaatagttgatgtat 31227556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 32811388 - 32811441
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||| ||||||||| |||| | ||||| |||||||||||||||||||||||    
T  32811388 atcctatatataagaaacaatttacttttttgattcattgaataattgatgtat 32811441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 28020012 - 28020064
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  28020012 tcctatttataagaaacaatttacttttttgattcattgaatagttgatgtat 28020064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 45123376 - 45123329
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||| ||||| ||||||||| |||| |||||||||    
T  45123376 ttataagaaataattaacttttttgattcattgtataagtgatgtatc 45123329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 31227631 - 31227577
Alignment:
Q  133 aatcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  31227631 aatcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 31227577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 10007713 - 10007660
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | || | ||||||||||||||| |||||| |||||||    
T  10007713 tcctatttataagaaaaagttgactttttagattcattgtataattaatgtatc 10007660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 11668152 - 11668099
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||||| | || | |||||| ||||||||| |||||||||||||    
T  11668152 tcctatttataagaaaaatttgactttttacattcattgattaattgatgtatc 11668099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 16861530 - 16861575
Alignment:
Q  142 tataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||| ||| |||| | |||||||||||||||||||||||||||||    
T  16861530 tataaaaaacaattgactttttagattcattgaataattgatgtat 16861575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 30869323 - 30869270
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||   || | |||||||||||||||| |||||||||||||    
T  30869323 tcctatttataagaaaattttgactttttagattcattgagtaattgatgtatc 30869270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 40142910 - 40142857
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||| ||||||||| |||| |||||||||||| |||| |||||| |||||||    
T  40142910 tcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatc 40142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 1366606 - 1366658
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  1366606 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 1366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 1366728 - 1366680
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||| ||||| | |||| |||||||||||||| |||||||||||||    
T  1366728 tatttatcagaaaaagttaactttttagattcattcaataattgatgta 1366680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 2610202 - 2610250
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||| | || |||||||| ||||||||| ||||||||||||    
T  2610202 atttataagaaaaatttgattttttaaattcattgagtaattgatgtat 2610250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 4826898 - 4826846
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  4826898 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 4826846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 29365758 - 29365706
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| ||||||||| |||| | |||||||||||||||| ||||| ||||||    
T  29365758 tcctatatataagaaaaaattgactttttagattcattgagtaattaatgtat 29365706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 40362005 - 40362033
Alignment:
Q  159 tttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||||||||||||||||    
T  40362005 tttttagattcattgaataattgatgtat 40362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 45441568 - 45441520
Alignment:
Q  140 tttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||| ||| |||||| |||||||||||| |||||||||| ||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatc 45441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 7649813 - 7649862
Alignment:
Q  138 tatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  7649813 tatttataataaataattatctttttagattcattgaataattgatgtat 7649862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 2810090 - 2810141
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||||||||||| ||| | ||||||||||||||||||| |||||||||||||    
T  2810090 tcctatttataaaaaaaagttaattttttagattcattcaataattgatgta 2810141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 1837095 - 1837045
Alignment:
Q  136 cctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||||| | ||||||||||||||| ||| |||||||||||||    
T  1837095 cctatttataagaaaaagttaattttttagatttattcaataattgatgta 1837045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 1158382 - 1158330
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| ||||||||||| | |||||| || |||||||||||||||||||    
T  1158382 tcctatttacaagaaataattgactttttaaatacattgaataattgatgtat 1158330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 10283431 - 10283379
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||| || ||||||||||||| ||| ||||| ||||||||||||    
T  10283431 tcctatttataagcaaaaattaattttttaaatttattgagtaattgatgtat 10283379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 12450366 - 12450414
Alignment:
Q  139 atttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||  |||| ||||| |||||||||||||||||||||||    
T  12450366 atttataagaaatgtttaactttttggattcattgaataattgatgtat 12450414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 33128849 - 33128889
Alignment:
Q  148 aaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  33128849 aaataattaattttttagattcatttaataattaatgtatc 33128889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 3064896 - 3064947
Alignment:
Q  137 ctatttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    |||||||||||||| |||||  ||||||||||||||| |||||| |||||||    
T  3064896 ctatttataagaaaaaattatctttttagattcattgtataattaatgtatc 3064947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 9343137 - 9343184
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtatc 188  Q
    ||||||||||||||| | ||||||||||||| |||||||| |||||||    
T  9343137 ttataagaaataattgactttttagattcatagaataattaatgtatc 9343184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 766564 - 766512
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||| |||| |||||| ||||||||||| |||| ||||||| ||||||    
T  766564 tcctatttacaagagataatttattttttagatacattaaataatttatgtat 766512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 2810215 - 2810163
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||| |||||||||||||| | |||||  |||||||||||| |||||||||    
T  2810215 tcctatatataagaaataatttacttttttcattcattgaatagttgatgtat 2810163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 2937090 - 2937134
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataa 178  Q
    ||||||||||||||||| | |||| ||||||||||||||| ||||    
T  2937090 atcctatttataagaaacatttaactttttagattcattgcataa 2937134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 7649935 - 7649888
Alignment:
Q  138 tatttataagaaataattaatttttt--agattcattgaataattgat 183  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||||    
T  7649935 tatttctaagaaataattaattttttttaaattcattgaataattgat 7649888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 8646816 - 8646764
Alignment:
Q  134 atcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    ||||||||||||||||| | |||  |||||||||| ||| |||||||||||||    
T  8646816 atcctatttataagaaaaagttatctttttagatttatttaataattgatgta 8646764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 28630890 - 28630838
Alignment:
Q  135 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    |||||||||||||||| |||| | ||||||||||||||| |||| | ||||||    
T  28630890 tcctatttataagaaacaattgactttttagattcattgcataaattatgtat 28630838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 16513 - 16569
Alignment:
Q  130 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 186  Q
    |||| ||||||||| |||||| | ||||||||||||||||||| |||||||||||||    
T  16513 tccagtcctatttacaagaaaaagttaattttttagattcattcaataattgatgta 16569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 5545 - 5499
Alignment:
Q  141 ttataagaaataattaattttttagattcattgaataattgatgtat 187  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||    
T  5545 ttataagaaataattgactttttagattcattgaataattaatgtat 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 423361 - 423333
Alignment:
Q  159 tttttagattcattgaataattgatgtat 187  Q
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T  423361 tttttagattcattgaataattgatgtat 423333  T

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