View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1830_high_22 (Length: 219)
Name: NF1830_high_22
Description: NF1830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1830_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 38872873 - 38872704
Alignment:
| Q |
35 |
ttagttttctgatgataagttgatcattggtaaaaagagttggtgcaaccataccaaaaaggtcacactttttactttttgagttgctttttggctgaag |
134 |
Q |
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| T |
38872873 |
ttagttttctgatgataagttgatcatgggtaaaaagagttggtgcaaccataccaaaaaggtcacactttttactttttgagttgctttctggctgaag |
38872774 |
T |
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| Q |
135 |
gtaaattttcacaaaaatttacttgttggtgttaatgtcgagtcatcttggttatatgagatggtctgtg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38872773 |
gtaaattttcacaaaaatttacttgttggtgttaatgtcgagtcatcttggttatatgagatggtctgtg |
38872704 |
T |
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