View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18312_high_3 (Length: 435)

Name: NF18312_high_3
Description: NF18312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18312_high_3
NF18312_high_3
[»] chr7 (12 HSPs)
chr7 (1-419)||(1984774-1985207)
chr7 (68-166)||(21882759-21882857)
chr7 (59-166)||(22631500-22631607)
chr7 (62-169)||(23611734-23611840)
chr7 (62-169)||(20125607-20125714)
chr7 (88-169)||(46297630-46297711)
chr7 (62-169)||(46413727-46413837)
chr7 (74-160)||(24250450-24250536)
chr7 (82-164)||(23730509-23730589)
chr7 (62-162)||(19511434-19511534)
chr7 (77-123)||(44601063-44601109)
chr7 (88-169)||(8123708-8123789)
[»] chr5 (9 HSPs)
chr5 (62-169)||(30735305-30735412)
chr5 (62-169)||(30700854-30700961)
chr5 (64-169)||(25493836-25493941)
chr5 (62-169)||(3040244-3040351)
chr5 (63-167)||(40519198-40519301)
chr5 (62-167)||(30071790-30071895)
chr5 (62-159)||(34280090-34280187)
chr5 (85-159)||(7547293-7547366)
chr5 (59-123)||(20359976-20360040)
[»] chr6 (11 HSPs)
chr6 (65-166)||(6784689-6784790)
chr6 (62-166)||(2130476-2130580)
chr6 (62-168)||(34713519-34713625)
chr6 (310-406)||(6934258-6934350)
chr6 (62-150)||(3855720-3855807)
chr6 (270-408)||(6941996-6942134)
chr6 (64-159)||(28867212-28867307)
chr6 (62-160)||(32871736-32871835)
chr6 (89-169)||(6519257-6519337)
chr6 (287-359)||(6953601-6953675)
chr6 (59-167)||(11301855-11301963)
[»] chr3 (9 HSPs)
chr3 (62-167)||(26442968-26443073)
chr3 (62-166)||(18271947-18272051)
chr3 (59-169)||(34905863-34905973)
chr3 (70-159)||(1713970-1714059)
chr3 (62-169)||(1632825-1632932)
chr3 (59-167)||(45852915-45853023)
chr3 (73-169)||(48897675-48897771)
chr3 (59-159)||(31192086-31192186)
chr3 (62-169)||(10593445-10593551)
[»] chr1 (10 HSPs)
chr1 (67-167)||(43537134-43537234)
chr1 (62-167)||(10061611-10061716)
chr1 (62-167)||(35413045-35413150)
chr1 (62-167)||(29657383-29657488)
chr1 (73-169)||(21540091-21540187)
chr1 (62-123)||(26470007-26470068)
chr1 (86-160)||(11470050-11470124)
chr1 (77-164)||(23906605-23906692)
chr1 (62-160)||(35149648-35149746)
chr1 (122-166)||(13085085-13085129)
[»] chr2 (15 HSPs)
chr2 (62-167)||(13716694-13716799)
chr2 (64-169)||(32976006-32976113)
chr2 (62-169)||(19945708-19945815)
chr2 (62-168)||(27007187-27007293)
chr2 (62-167)||(20142987-20143092)
chr2 (62-160)||(14131182-14131280)
chr2 (62-167)||(3167915-3168020)
chr2 (59-159)||(4434324-4434427)
chr2 (68-160)||(38320190-38320282)
chr2 (62-147)||(31845453-31845538)
chr2 (83-160)||(37714449-37714526)
chr2 (68-159)||(35457427-35457518)
chr2 (86-164)||(27407444-27407522)
chr2 (82-152)||(5881435-5881505)
chr2 (69-169)||(31645087-31645188)
[»] scaffold0122 (1 HSPs)
scaffold0122 (71-159)||(18661-18749)
[»] chr8 (9 HSPs)
chr8 (59-159)||(5718428-5718528)
chr8 (64-169)||(29414399-29414504)
chr8 (62-158)||(38585072-38585168)
chr8 (64-159)||(5686276-5686371)
chr8 (62-156)||(25124400-25124494)
chr8 (62-169)||(33543365-33543471)
chr8 (88-167)||(26415571-26415650)
chr8 (86-167)||(24068125-24068205)
chr8 (79-159)||(36947226-36947306)
[»] chr4 (10 HSPs)
chr4 (59-169)||(5288539-5288649)
chr4 (68-169)||(24060593-24060694)
chr4 (64-160)||(42504180-42504276)
chr4 (94-167)||(25817684-25817757)
chr4 (64-167)||(16528582-16528688)
chr4 (64-160)||(30220726-30220821)
chr4 (95-160)||(19482544-19482609)
chr4 (62-160)||(37762833-37762931)
chr4 (86-159)||(51304307-51304380)
chr4 (107-159)||(29065307-29065359)
[»] scaffold0194 (1 HSPs)
scaffold0194 (62-149)||(27093-27180)
[»] scaffold0018 (1 HSPs)
scaffold0018 (106-164)||(69953-70011)


Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 419
Target Start/End: Complemental strand, 1985207 - 1984774
Alignment:
Q  1 attatacggaggtcatcatgatcgagttttatgatacatattttaatgggaaa----------------cgaacaactttatcaagaaaatttcaaaaca 84  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||                ||||||||| |||||||||||||| || | |    
T  1985207 attatacggatgtcatcatgatcgagttttatgatacatattttaatgggaaatgatagatacagcgagcgaacaactgtatcaagaaaattttaagata 1985108  T
Q  85 gtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagacataaactctcttgataa 184  Q
    |||||||||||||||||||| |||||||||  |||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  1985107 gtgtatttgctaacacatttccttaattacataccattaccttccttgatttccggcaaataacaaatttaattggctgagacataaactttcttgataa 1985008  T
Q  185 ataaattctattttaattttggttttaaaattttgatcggtcgtcgatgttccgaatgcgtgaatgcgggagtctgacgtcaacttagtttccaatggaa 284  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  1985007 ataaattctattttaatattggttttaaaattttgatcggtcgtcgatgtcccaaatgcatgaatgcgggagtctgacg-caacttagtttccaatggaa 1984909  T
Q  285 agagagagaaaactaacatttttatatgattgaaaaagagtgttatatagttgtaggttcttgattatgtgtaatgaatggttatttaagccatgtcata 384  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1984908 agagagagaaaactaacatttttttatgatagaaaaagagtgttatatagttgtaggttcttgattatgtgtaatgaatggttatttaagccatgtcata 1984809  T
Q  385 ttatgtgtaataactgcttaaaaaataatacttgt 419  Q
    |||||||||||||||||||||||||||||||||||    
T  1984808 ttatgtgtaataactgcttaaaaaataatacttgt 1984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 21882759 - 21882857
Alignment:
Q  68 aagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgaga 166  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  21882759 aagaaaatttcaagacagtgtatttgctaacacttttccttaattacacaccattacctcccttgatttccggcaaataacaaatttaattggctgaga 21882857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 22631607 - 22631500
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||||||||||||||||||||| || ||||||| |||||||| ||| ||||||||| ||| ||||  ||| || ||||||||||||||||||||||||||    
T  22631607 aactttatcaagaaaatttcaagacggtgtattagctaacacctttccttaattacacactattatctcctttgatttccgacaaataacaaatttaatt 22631508  T
Q  159 ggctgaga 166  Q
    ||||||||    
T  22631507 ggctgaga 22631500  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 23611734 - 23611840
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||||   ||||||| || ||| ||||||| |||||||||||||||||| |     
T  23611734 tttatcaagaaaatttcaaaacagtgtatttgttaacacctttacttaattac-atccattacctctcttgatttccgtcaaataacaaatttaatttgt 23611832  T
Q  162 tgagacat 169  Q
    ||||||||    
T  23611833 tgagacat 23611840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 20125714 - 20125607
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || |||||||||||||||| || |||  |||||||| ||||||||  | | |||||||| ||||| |||||||||||||||||    
T  20125714 tttatcaagaaaatttgaagacagtgtatttgctaatacctttctttaattacacaccattatcttctttaatttctgacaagtaacaaatttaattggc 20125615  T
Q  162 tgagacat 169  Q
    ||| ||||    
T  20125614 tgacacat 20125607  T

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Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 46297711 - 46297630
Alignment:
Q  88 tatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagacat 169  Q
    ||||||||||||||||| ||||||||| ||||||||  |||||| |||| |||||||||||||||| || ||||||||||||    
T  46297711 tatttgctaacacatttccttaattacacaccattaactcccttgattttcgacaaataacaaattaaaatggctgagacat 46297630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 46413727 - 46413837
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccg---acaaataacaaatttaatt 158  Q
    ||||| || |||||||||| |||||||||||| |||||| ||| ||||||||| || |||||| |||||| |||||||    ||||||||||||||||||    
T  46413727 tttattaaaaaaatttcaagacagtgtatttgttaacacctttccttaattacacatcattacctcccttgatttccgccaccaaataacaaatttaatt 46413826  T
Q  159 ggctgagacat 169  Q
    || ||||||||    
T  46413827 ggttgagacat 46413837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 24250450 - 24250536
Alignment:
Q  74 atttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    ||||||| |||| |||||| |||| |  |||||||||||||  |||||||| |||||| ||||||||||||||||||||| ||||||    
T  24250450 atttcaagacagcgtatttactaatatcttttcttaattacaaaccattacctcccttgatttccgacaaataacaaattaaattgg 24250536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 23730509 - 23730589
Alignment:
Q  82 acagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctga 164  Q
    |||||||||||| |||||| ||| |||||||||  |||||||| || ||| |||||||||||||||| ||||||||| |||||    
T  23730509 acagtgtatttgttaacacctttccttaattac--accattacctctcttgatttccgacaaataacgaatttaatttgctga 23730589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 19511534 - 19511434
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||| |||||||| | |||||||||||  |||||| ||| ||||||||| ||| ||||  ||| || |||||| | |||||| |||||||||||||    
T  19511534 tttatcaaaaaaatttcgagacagtgtatttattaacacctttccttaattactcactattatctccattgatttccaaaaaataataaatttaattggc 19511435  T
Q  162 t 162  Q
    |    
T  19511434 t 19511434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 44601109 - 44601063
Alignment:
Q  77 tcaaaacagtgtatttgctaacacattttcttaattacgcaccatta 123  Q
    |||| ||||||||||||||||||||||||||||||||| || |||||    
T  44601109 tcaagacagtgtatttgctaacacattttcttaattacacatcatta 44601063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 8123789 - 8123708
Alignment:
Q  88 tatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagacat 169  Q
    ||||||||||||| |||  |||||||  ||  ||||  ||| ||||||||| |||||||||||||||||||| |||||||||    
T  8123789 tatttgctaacacctttctttaattatacattattatctccattaatttccaacaaataacaaatttaattgactgagacat 8123708  T

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Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 30735305 - 30735412
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||||| ||||||| |||||||||||||||||||      
T  30735305 tttatcaagaaaatttcaaaacagtgtatttgctaacactttttcttaattacccagcattacctcccttgatttccgccaaataacaaatttaattgat 30735404  T
Q  162 tgagacat 169  Q
    ||||||||    
T  30735405 tgagacat 30735412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 30700854 - 30700961
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||| ||||||| || ||||||||||||||||||| ||||||||||||| || |||||| ||||||||||| || |||||||||||||||||||      
T  30700854 tttatcaaaaaaattttaagacagtgtatttgctaacaccttttcttaattacacaacattacctcccttaattttcgtcaaataacaaatttaattgat 30700953  T
Q  162 tgagacat 169  Q
    ||||||||    
T  30700954 tgagacat 30700961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 25493941 - 25493836
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctg 163  Q
    |||| |||||||||||| ||||| |||||| ||| |||||| ||||||||| ||||||||| ||| || ||||| |||||| ||||||||||||||||||    
T  25493941 tatccagaaaatttcaagacagtatatttgttaatacatttccttaattacacaccattacctcctttgatttctgacaaagaacaaatttaattggctg 25493842  T
Q  164 agacat 169  Q
    ||||||    
T  25493841 agacat 25493836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 3040244 - 3040351
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || ||||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||| |  || ||||||||||||||||      
T  3040244 tttatcaagaaaattttaagacagtgtatttgctaacacctttccttaattacacaccattacctcccttgattttcaccagataacaaatttaattgat 3040343  T
Q  162 tgagacat 169  Q
    ||||||||    
T  3040344 tgagacat 3040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 40519301 - 40519198
Alignment:
Q  63 ttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggct 162  Q
    ||||||||||||||| || ||||||||||||| || |  ||||||||||||| || |||||| |||| | ||||||  |||||||||||||||||||| |    
T  40519301 ttatcaagaaaattttaagacagtgtatttgccaatattttttcttaattacacatcattacctccc-tgatttccatcaaataacaaatttaattggtt 40519203  T
Q  163 gagac 167  Q
    |||||    
T  40519202 gagac 40519198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 30071895 - 30071790
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||| |||||||||| || ||| ||||||||||||| | ||| || |||||| ||||| ||| | || | |||||| |||||||| ||||||||||||     
T  30071895 tttatgaagaaaattttaagacaatgtatttgctaactcctttcctcaattacacaccactaccttccatgatttccaacaaataataaatttaattggt 30071796  T
Q  162 tgagac 167  Q
    ||||||    
T  30071795 tgagac 30071790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 34280090 - 34280187
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    |||||||| || |||| ||  ||||||||||| |||||  ||| |||||||||  |||||||  | |||||||||||| |||||||||||||||||||    
T  34280090 tttatcaataatattttaagtcagtgtatttgttaacatctttccttaattacataccattatcttccttaatttccgccaaataacaaatttaattg 34280187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 7547366 - 7547293
Alignment:
Q  85 gtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    |||||||||||||||||||| |||||||||  | |||||  | |||| ||||||| |||||||||||||| ||||    
T  7547366 gtgtatttgctaacacatttccttaattacaaatcattatct-ccttgatttccgtcaaataacaaatttgattg 7547293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 20360040 - 20359976
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccatta 123  Q
    |||| |||||||||| |||||| || || ||||||||||||| |||  |||||||| ||||||||    
T  20360040 aactgtatcaagaaagtttcaagacggtatatttgctaacacctttctttaattacacaccatta 20359976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 6784689 - 6784790
Alignment:
Q  65 atcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctga 164  Q
    |||||||||||||| | | ||||||||||||||||| ||||||||||||| ||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  6784689 atcaagaaaatttcgagatagtgtatttgctaacaccttttcttaattacacaccattatctcccttgatttccgacaaataacaaatttaattggctga 6784788  T
Q  165 ga 166  Q
    ||    
T  6784789 ga 6784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 2130476 - 2130580
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||| || || ||| || ||||||| ||||||||||||||||||||     
T  2130476 tttatcaagaaaatttcaaaacggtgtatttgctaacacctttccttaattacacacaatcacctcctttgatttccgccaaataacaaatttaattggt 2130575  T
Q  162 tgaga 166  Q
    |||||    
T  2130576 tgaga 2130580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 34713625 - 34713519
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || | |||||||||| |||||| ||||||||| ||| |||||||||||||||| |||| || |||||||||||||||||| |     
T  34713625 tttatcaagaaaattttaagatagtgtatttgttaacaccttttcttaaatacacaccattacatcccttgattttcgccaaataacaaatttaattagt 34713526  T
Q  162 tgagaca 168  Q
    |||||||    
T  34713525 tgagaca 34713519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 406
Target Start/End: Complemental strand, 6934350 - 6934258
Alignment:
Q  310 atgattgaaaaagagtgttatatagttgtaggttcttgattatgtgtaatgaatggttatttaagccatgtcatattatgtgtaataactgcttaaa 406  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||||||||    |||||||||||||||||||||||||| ||||||||| |||||    
T  6934350 atgatcgaaaaggagagttatatagttgtaggttgttgattatgtgtaatg----gttatttaagccatgtcatattatgtataataactgtttaaa 6934258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 3855720 - 3855807
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaa 150  Q
    ||||||||||||||||||| |||||||||| |||||||| ||| ||||||||| ||  |||||||||||||||||||| ||||||||||    
T  3855720 tttatcaagaaaatttcaagacagtgtatt-gctaacacctttccttaattacacattattacatcccttaatttccgtcaaataacaa 3855807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 408
Target Start/End: Complemental strand, 6942134 - 6941996
Alignment:
Q  270 tagtttccaatggaaaga--gagagaaaactaa--catttttatatgattgaaaaagagtgttatatagttgtaggttcttgattatgtgtaatgaatgg 365  Q
    ||||||||||||||||||  ||||||||||| |  ||||||  |||||| ||||||||||||||||||||||||||||||  ||||| |||    || ||    
T  6942134 tagtttccaatggaaagaaagagagaaaacttaatcattttcttatgatagaaaaagagtgttatatagttgtaggttctcaattatatgt----aaagg 6942039  T
Q  366 ttatttaagccatgtcatattatgtgtaataactgcttaaaaa 408  Q
    ||||||||||  ||| ||| ||||||||||||||| |||||||    
T  6942038 ttatttaagcagtgttatactatgtgtaataactgtttaaaaa 6941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 28867307 - 28867212
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    ||||||||||||||||| ||| |||||||||||| |||||| |||||||||  || ||||| ||| || |||||| ||||||||||||||||||||    
T  28867307 tatcaagaaaatttcaagacaatgtatttgctaaaacatttccttaattacatactattacctcctttgatttccaacaaataacaaatttaattg 28867212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 32871736 - 32871835
Alignment:
Q  62 tttatcaagaaaatttcaaa-acagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    ||||||||||||||||| || ||||||||||| ||||||  ||| ||||||||| ||| ||||| |||||| ||||||| ||||||||||||||||||||    
T  32871736 tttatcaagaaaatttctaagacagtgtatttactaacatttttccttaattacacactattacctcccttgatttccgtcaaataacaaatttaattgg 32871835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 6519337 - 6519257
Alignment:
Q  89 atttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagacat 169  Q
    |||||||||| ||||||||||||||| || |||||||||| || |||| || ||||||||||||||||||| |||||||||    
T  6519337 atttgctaactcattttcttaattacacatcattacatcctttgattttcggcaaataacaaatttaattgactgagacat 6519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 6953675 - 6953601
Alignment:
Q  287 agagagaaaactaa--catttttatatgattgaaaaagagtgttatatagttgtaggttcttgattatgtgtaat 359  Q
    |||||||||||| |  |||||||  ||||| ||||||||| |||||||||||||| ||||| |||||||||||||    
T  6953675 agagagaaaacttaatcattttttgatgatagaaaaagagagttatatagttgtaagttctcgattatgtgtaat 6953601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 11301963 - 11301855
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||| |||||||||||||| |||| ||||||||| ||||||  ||| ||||||||   || ||||| |  ||| |||| ||| |||||||||||| ||||    
T  11301963 aactgtatcaagaaaattttaaaatagtgtatttcctaacatctttccttaattatatactattaccttgcttgattttcgagaaataacaaattcaatt 11301864  T
Q  159 ggctgagac 167  Q
    | |||||||    
T  11301863 gactgagac 11301855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 26443073 - 26442968
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| |||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||     
T  26443073 tttatcaagaaaatttcaagacagtgtatttggtaacaccttttgttaattacacaccattacctcccttgatttccgccaaataacaaatttaattggt 26442974  T
Q  162 tgagac 167  Q
    ||||||    
T  26442973 tgagac 26442968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 18271947 - 18272051
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || | || |||||||||||||| |||  |||||||| ||||||||| ||| || ||||||| ||||||||||||||||||||     
T  18271947 tttatcaagaaaattttaagatagagtatttgctaacacctttctttaattacacaccattacctccattgatttccgccaaataacaaatttaattggt 18272046  T
Q  162 tgaga 166  Q
    |||||    
T  18272047 tgaga 18272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 34905973 - 34905863
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||| |||| ||||||||| || ||||||||||||||||||| ||| ||||||||  || |||||| ||| || ||||  |||||||||||||||||| |    
T  34905973 aactgtatcgagaaaattttaagacagtgtatttgctaacacctttccttaattatacatcattacctcctttgatttttgacaaataacaaatttaact 34905874  T
Q  159 ggctgagacat 169  Q
    |||||||||||    
T  34905873 ggctgagacat 34905863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 1713970 - 1714059
Alignment:
Q  70 gaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||  ||| ||||  |||||||||||||| |||||||||||||||||||    
T  1713970 gaaaatttcaagacagtgtatttattaacatattttcttaattatacacaattatctcccttaatttccgccaaataacaaatttaattg 1714059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 1632932 - 1632825
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||| |||||| ||| |||||||||||| |||||| |||  |||||||| ||||||||| ||| || |||||||  ||||||||||||||||| |     
T  1632932 tttatcaaaaaaattccaagacagtgtatttgttaacacgtttctttaattacacaccattacctcctttgatttccgcaaaataacaaatttaattagt 1632833  T
Q  162 tgagacat 169  Q
    ||||||||    
T  1632832 tgagacat 1632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 45852915 - 45853023
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||| |||||||||||||| || || |||||||||||||||| |||||||||||||  | |||||  |||||| ||| |   ||||||| ||||||||||    
T  45852915 aactgtatcaagaaaattttaagaccgtgtatttgctaacaccttttcttaattacatatcattatctcccttgattgcaagcaaataataaatttaatt 45853014  T
Q  159 ggctgagac 167  Q
    || ||||||    
T  45853015 ggttgagac 45853023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 48897675 - 48897771
Alignment:
Q  73 aatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagacat 169  Q
    ||||||||  |||| ||||||||||||  ||||||||||||| ||||||||  ||| || |||| ||||||||||||||||||| | ||||| ||||    
T  48897675 aatttcaaggcagtctatttgctaacatcttttcttaattacacaccattatttccattgattttcgacaaataacaaatttaacttgctgaaacat 48897771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 31192186 - 31192086
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||| |||||||||||||| || |||| ||||||||||| |  ||| ||||||||| ||| ||||  || |||||||| | | |||||||||||||||||    
T  31192186 aactgtatcaagaaaattttaagacagggtatttgctaatatctttccttaattacacactattatctctcttaattttcaataaataacaaatttaatt 31192087  T
Q  159 g 159  Q
    |    
T  31192086 g 31192086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 10593445 - 10593551
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || | |||||||||| |||||| ||||| ||||||  ||||||||  |  ||| |  ||||  |||||||||||||||||||     
T  10593445 tttatcaagaaaattttaagatagtgtatttgttaacaccttttcctaattatacaccattagttttcttga-atccgctaaataacaaatttaattggt 10593543  T
Q  162 tgagacat 169  Q
    ||||||||    
T  10593544 tgagacat 10593551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 43537134 - 43537234
Alignment:
Q  67 caagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgaga 166  Q
    |||||||||||||| |||||||||||| ||||||||||  |||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  43537134 caagaaaatttcaagacagtgtatttgttaacacatttctttaattacacaccattacctcccttgatttccggcaaataacaaatttaattggctgaga 43537233  T
Q  167 c 167  Q
    |    
T  43537234 c 43537234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 10061716 - 10061611
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| || |||||| |||||| ||||| | ||||||||||||||||||||     
T  10061716 tttatcaagaaaatttcaagacagtttatttgctaacacatttccttaattacacatcattacctcccttgatttctgtcaaataacaaatttaattggt 10061617  T
Q  162 tgagac 167  Q
    ||||||    
T  10061616 tgagac 10061611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 35413150 - 35413045
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||| | |||||||||| |||||| ||| ||||||||| ||| ||||| |||||| ||||||| ||||||||||||||||||||     
T  35413150 tttatcaagaaaatttcaagagagtgtatttgttaacacctttccttaattacacactattacctcccttgatttccgtcaaataacaaatttaattggt 35413051  T
Q  162 tgagac 167  Q
    ||||||    
T  35413050 tgagac 35413045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 29657488 - 29657383
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||  | |||||| ||| || |||| || ||||||||||||||||||||     
T  29657488 tttatcaagaaaatttcaagacagtgtatttgctaacacctttccttaattacatatcattacctcctttgattttcggcaaataacaaatttaattggt 29657389  T
Q  162 tgagac 167  Q
    ||||||    
T  29657388 tgagac 29657383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 21540187 - 21540091
Alignment:
Q  73 aatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagacat 169  Q
    |||||||| |||||||||||| |||||| |||  |||||||| |  |||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  21540187 aatttcaagacagtgtatttgttaacacctttctttaattacacttcattatctcccttaatttccgccaaataacaaatttaattggctgagacat 21540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 26470068 - 26470007
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccatta 123  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||    
T  26470068 tttatcaagaaaattttaaaacagtgtatttgctaacacctttccttaattacacaccatta 26470007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 11470124 - 11470050
Alignment:
Q  86 tgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||  ||||| |||||||||||||| || |||||| |||||| ||||||| ||||||||||||||||||||    
T  11470124 tgtatttcttaacatattttcttaattacacatcattacctcccttgatttccgccaaataacaaatttaattgg 11470050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 23906605 - 23906692
Alignment:
Q  77 tcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctga 164  Q
    |||| ||| ||||||||||||||| |||  |||||||| ||||||||| || ||| ||||  | ||||||||||||||||||||||||    
T  23906605 tcaagacaatgtatttgctaacacctttctttaattacacaccattacctctcttgatttgtggcaaataacaaatttaattggctga 23906692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 35149648 - 35149746
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||| |||||||||| | | ||||||||||||||| ||| ||||||||  || |||||  |||||| ||||  | ||||||||||||||||||||    
T  35149648 tttatcaaaaaaatttcaagagaatgtatttgctaacacctttccttaattatacatcattatctcccttgatttatgtcaaataacaaatttaattgg 35149746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 13085085 - 13085129
Alignment:
Q  122 tacatcccttaatttccgacaaataacaaatttaattggctgaga 166  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  13085085 tacatcccttgatttccggcaaataacaaatttaattgactgaga 13085129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 13716694 - 13716799
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||| || |||| || ||||| ||||||||||||||     
T  13716694 tttatcaagaaaatttcaaaacagtgtatttgctaacaccttttcttaattacacactattacctcctttgattttcgccaaatcacaaatttaattggt 13716793  T
Q  162 tgagac 167  Q
    ||||||    
T  13716794 tgagac 13716799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 32976006 - 32976113
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcacca--ttacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||  ||||  |||| | | || ||||||||||||||||||||||||||||     
T  32976006 tatcaagaaaatttcaaaacagtgtatttactaacaccttttcttaattacataccattttaccttctttgatttccgacaaataacaaatttaattggt 32976105  T
Q  162 tgagacat 169  Q
    ||||||||    
T  32976106 tgagacat 32976113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 19945708 - 19945815
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || |||||||||||| ||| |  ||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |    
T  19945708 tttatcaagaaaattttaagacagtgtatttgttaatatctttccttaattacacaccattacctcccttaatttccgtcaaataacaaatttaattgac 19945807  T
Q  162 tgagacat 169  Q
     |||||||    
T  19945808 cgagacat 19945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 27007293 - 27007187
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||||| || |||||||||||| |||||| ||| ||||| ||| ||| ||||| |||||| ||||||| ||||||||||||||| ||||     
T  27007293 tttatcaagaaaattttaagacagtgtatttgttaacacttttccttaaatacacactattacctcccttgatttccgccaaataacaaatttatttggt 27007194  T
Q  162 tgagaca 168  Q
    |||||||    
T  27007193 tgagaca 27007187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 20143092 - 20142987
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||||| | ||||||||| ||||||| ||| ||||||||| || |||||| | |||| ||||||| ||||||| ||||||||||||     
T  20143092 tttatcaagaaaatttcaagatagtgtattttctaacacctttccttaattacacatcattaccttccttgatttccgccaaataataaatttaattggt 20142993  T
Q  162 tgagac 167  Q
    ||||||    
T  20142992 tgagac 20142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 14131280 - 14131182
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    ||||| |||||||||| || | ||||||||||||||||||||| ||||||||| ||||||||  || ||| ||||||| ||||||||| ||||||||||    
T  14131280 tttatgaagaaaattttaagatagtgtatttgctaacacatttccttaattacacaccattatctcgcttgatttccgccaaataacagatttaattgg 14131182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 3168020 - 3167915
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    ||||||||||||||||  ||| ||| ||||||||||||| |||  |||||||| || |||||| | | || ||||||||||||||| ||||||||||||     
T  3168020 tttatcaagaaaatttttaaatagtatatttgctaacacctttctttaattacacatcattaccttctttgatttccgacaaataataaatttaattggt 3167921  T
Q  162 tgagac 167  Q
    ||||||    
T  3167920 tgagac 3167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 4434427 - 4434324
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccatta---catcccttaatttccgacaaataacaaattta 155  Q
    |||| ||| ||||||||||||||||| | ||||||| ||||||||| ||||||||| ||||||||   | |||||| |||| || |||||||||||||||    
T  4434427 aactgtattaagaaaatttcaaaacaatatatttgccaacacatttacttaattacacaccattacctcctcccttgattttcggcaaataacaaattta 4434328  T
Q  156 attg 159  Q
    ||||    
T  4434327 attg 4434324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 38320190 - 38320282
Alignment:
Q  68 aagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||||| || |||||||||||| |||||||||| |||| |||| || |||||| ||| || ||||||  ||||||||||||||||||||    
T  38320190 aagaaaattttaagacagtgtatttgataacacatttccttatttacacatcattacctcctttgatttccaccaaataacaaatttaattgg 38320282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 31845538 - 31845453
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataa 147  Q
    ||||||||||||||||  | ||||||||||||||||||  ||  ||||||||| ||||||||| || ||| |||||||||||||||    
T  31845538 tttatcaagaaaatttttagacagtgtatttgctaacatcttaccttaattacacaccattacctctcttgatttccgacaaataa 31845453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 37714526 - 37714449
Alignment:
Q  83 cagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||||||||||||| ||| ||||||||| ||||||||  ||| || ||||||  ||||||||||||||||||||    
T  37714526 cagtgtatttgctaacacctttccttaattacacaccattatctcctttgatttccatcaaataacaaatttaattgg 37714449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 35457518 - 35457427
Alignment:
Q  68 aagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    |||||||||| || | ||| |||||| |||||||||| ||||||||| ||||||||| ||| || |||||||  |||||| |||||||||||    
T  35457518 aagaaaattttaagatagtatatttgttaacacatttccttaattacacaccattacctcctttgatttccgctaaataataaatttaattg 35457427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 27407522 - 27407444
Alignment:
Q  86 tgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctga 164  Q
    |||||||||||| |||||| ||||||||| || |||||  | |||| |||||||  |||||||||||||||||||||||    
T  27407522 tgtatttgctaatacatttccttaattacacagcattatcttccttgatttccggtaaataacaaatttaattggctga 27407444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 5881435 - 5881505
Alignment:
Q  82 acagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaat 152  Q
    ||||| |||||||||| || ||| ||||||||| || |||||||| |||| |||||||  |||||||||||    
T  5881435 acagtatatttgctaatacctttccttaattacacatcattacattccttgatttccggtaaataacaaat 5881505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 31645087 - 31645188
Alignment:
Q  69 agaaaatttcaaaacagtgtatttgctaacaca-ttttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagac 167  Q
    ||||||||| || | | |||||||||||||||  ||||||||||||| || |||||| |  ||| ||||||| ||||| | |||||||||||| | ||||    
T  31645087 agaaaattttaagagaatgtatttgctaacacccttttcttaattacacatcattacgtttcttgatttccgccaaattaaaaatttaattggttaagac 31645186  T
Q  168 at 169  Q
    ||    
T  31645187 at 31645188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 18749 - 18661
Alignment:
Q  71 aaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||    
T  18749 aaaaattcaaaacagtgtatttgctaacacatttccttaattactcaccattatctcccttaattttcgacaaataacaaatttaattg 18661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 5718428 - 5718528
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||| |||||||||||||| || ||||||||||||||||||||||| ||||||||| ||||||||| | |||| ||||||||||||||| ||||||||||    
T  5718428 aactatatcaagaaaattttaagacagtgtatttgctaacacatttccttaattacacaccattaccttccttgatttccgacaaataataaatttaatt 5718527  T
Q  159 g 159  Q
    |    
T  5718528 g 5718528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 29414504 - 29414399
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctg 163  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||  ||||||||| | |||| |||| || |||||||||||||||||||||||    
T  29414504 tatcaagaaaatttcaaaacagtgcatttgttaacacctttccttaattaaacaccattaccttccttgattttcggcaaataacaaatttaattggctg 29414405  T
Q  164 agacat 169  Q
    ||||||    
T  29414404 agacat 29414399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 38585072 - 38585168
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||||||||||||||||||| || ||||||||||||||| |||  |||||||| ||| ||||| ||| || ||||||| ||||| ||||||||||||    
T  38585072 tttatcaagaaaatttcaaagcaatgtatttgctaacacttttctttaattacacacaattacctcctttgatttccgccaaatgacaaatttaatt 38585168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 5686276 - 5686371
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    ||||||||||||||||| | || ||||||||||||||||||  ||||||||  |  ||||| |||||| ||||||| |||||||||||||||||||    
T  5686276 tatcaagaaaatttcaagatagcgtatttgctaacacatttcattaattacatattattacctcccttgatttccggcaaataacaaatttaattg 5686371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 25124494 - 25124400
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaa 156  Q
    ||||||||||||||||||| |||||||||||| ||| || ||||||||||||| || |||||  || ||| ||||||| |||||||||| |||||    
T  25124494 tttatcaagaaaatttcaagacagtgtatttgttaataccttttcttaattacacatcattatctctcttgatttccgccaaataacaactttaa 25124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 33543471 - 33543365
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggc 161  Q
    |||||||||||||| |||| ||||| |||||| |||||| |||| |||||||| || |||||  |||||| ||||| | |||||||||||||| |||||     
T  33543471 tttatcaagaaaatatcaagacagtatatttgttaacacctttttttaattacaca-cattatctcccttgatttcagccaaataacaaattttattggt 33543373  T
Q  162 tgagacat 169  Q
    ||||||||    
T  33543372 tgagacat 33543365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 26415650 - 26415571
Alignment:
Q  88 tatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagac 167  Q
    |||||||||| || ||| ||||||||| || |||||  ||  |||||||||| ||||||| |||||||||||| ||||||    
T  26415650 tatttgctaatacctttccttaattacacatcattatctcttttaatttccgtcaaataataaatttaattggttgagac 26415571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 24068125 - 24068205
Alignment:
Q  86 tgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagac 167  Q
    ||||||| ||||||  ||| ||||||||| |||||| || ||| || ||||  | |||||||||||||||||||||||||||    
T  24068125 tgtatttcctaacatctttccttaattacacaccatcacctcctttgattttgg-caaataacaaatttaattggctgagac 24068205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 36947226 - 36947306
Alignment:
Q  79 aaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    ||||||||||||||  ||||||||||  |||||||  || |||||| |||||| ||||  | | |||||||||||||||||    
T  36947226 aaaacagtgtatttattaacacatttctttaattatacatcattacctcccttcatttttggccaataacaaatttaattg 36947306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 5288649 - 5288539
Alignment:
Q  59 aactttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaatt 158  Q
    |||| |||||||||| |||||| || || |||||||||||||||||| |||||||| ||||||||  |||||| |||| || ||||||||||||||||||    
T  5288649 aactgtatcaagaaagtttcaagacggtatatttgctaacacatttttttaattacacaccattatctcccttgatttacggcaaataacaaatttaatt 5288550  T
Q  159 ggctgagacat 169  Q
    |||||||||||    
T  5288549 ggctgagacat 5288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 24060694 - 24060593
Alignment:
Q  68 aagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagac 167  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||  |||||| |||||  || |||||||||||||||| ||| ||||    
T  24060694 aagaaaattttaaaacagtgtatttgctaacacatttccttaattacacaccattatctcccttgatttctaaccaataacaaatttaattagcttagac 24060595  T
Q  168 at 169  Q
    ||    
T  24060594 at 24060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 42504180 - 42504276
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||||||||| || |||||||||||| |||||| ||| ||||||||| || |||||| |||||| ||||||| ||||||||||||||||||||    
T  42504180 tatcaagaaaattttaagacagtgtatttgttaacacctttccttaattacacatcattacctcccttgatttccggcaaataacaaatttaattgg 42504276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 25817757 - 25817684
Alignment:
Q  94 ctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctgagac 167  Q
    ||||||||||||||||||||| ||||||||| || ||| ||||||| |||||||||||||||||||||||||||    
T  25817757 ctaacacattttcttaattacacaccattacctcacttgatttccgtcaaataacaaatttaattggctgagac 25817684  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 16528688 - 16528582
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattac---atcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||||||||| || | |||||||||| ||||||||||  |||||||| ||||||||    |||  || ||||||||||||||||||||||||||||    
T  16528688 tatcaagaaaattttaagatagtgtatttgttaacacatttctttaattacacaccattaatatatcatttgatttccgacaaataacaaatttaattgg 16528589  T
Q  161 ctgagac 167  Q
    |||||||    
T  16528588 ctgagac 16528582  T

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Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 30220821 - 30220726
Alignment:
Q  64 tatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||||||||| || ||||||||||||||||||| ||| ||||||||| ||||| ||| |||||| ||||||| | ||||||||| ||||||||    
T  30220821 tatcaagaaaattttaagacagtgtatttgctaacacttttccttaattacacaccaatac-tcccttgatttccggccaataacaaaattaattgg 30220726  T

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Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 19482609 - 19482544
Alignment:
Q  95 taacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||| ||| ||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||    
T  19482609 taacacctttccttaattacacaccattacttcccttgatttccgccaaataacaaatttaattgg 19482544  T

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Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 37762931 - 37762833
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattgg 160  Q
    |||||||| |||||||||| ||| |||||||| |||||| ||| ||||||||| || |||||  ||| || | || || ||||||||||||||||||||    
T  37762931 tttatcaaaaaaatttcaagacaatgtatttgttaacacttttccttaattacacatcattatttcctttgactttcgtcaaataacaaatttaattgg 37762833  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 51304307 - 51304380
Alignment:
Q  86 tgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    |||||||||||||| ||||| |||||| | | ||||||  ||| || ||||||| |||||||||||||||||||    
T  51304307 tgtatttgctaacatatttttttaattgcacgccattatctcctttgatttccgtcaaataacaaatttaattg 51304380  T

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Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 29065307 - 29065359
Alignment:
Q  107 ttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattg 159  Q
    |||||||| ||||||||| ||| || ||||||| |||||||||||||||||||    
T  29065307 ttaattacacaccattacctccattgatttccgtcaaataacaaatttaattg 29065359  T

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Target: scaffold0194 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 27093 - 27180
Alignment:
Q  62 tttatcaagaaaatttcaaaacagtgtatttgctaacacattttcttaattacgcaccattacatcccttaatttccgacaaataaca 149  Q
    ||||||||||||||||||| |||||||||||| |||||| ||| ||||||||| | | ||||  |||||| ||||||| |||||||||    
T  27093 tttatcaagaaaatttcaagacagtgtatttgttaacacctttccttaattacactctattatctcccttgatttccgccaaataaca 27180  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 69953 - 70011
Alignment:
Q  106 cttaattacgcaccattacatcccttaatttccgacaaataacaaatttaattggctga 164  Q
    ||||||||| | ||||||  |||||| ||||||| | ||||||||||||||||||||||    
T  69953 cttaattacaccccattatctcccttgatttccggccaataacaaatttaattggctga 70011  T

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