View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18313_high_23 (Length: 310)
Name: NF18313_high_23
Description: NF18313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18313_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 42021198 - 42021490
Alignment:
| Q |
1 |
tctttctgatgctaagtatgatgaaggacctgaaccggttaatggattttacgtcatggttttggtgaactctgaattgggtttattcctcggagacaaa |
100 |
Q |
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| T |
42021198 |
tctttctgatgctaagtatgatgaaggacctgaaccggttaatggattttacgtcatggttttggtgaactctgaattgggtttattcctcggagacaaa |
42021297 |
T |
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| Q |
101 |
gaagaagattcgttgaagaacttggaagataagaaaaaccatgatgcaaaattctcaatggtttcaagaagtgaaagattttatggtacaagtgtttatg |
200 |
Q |
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| T |
42021298 |
gaagaagattcgttggagaacttggaagataagaaaaaccatgatgcaaaattctcaatggtttcaagaagtgaaagattttatggtacaagtgtttatg |
42021397 |
T |
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| Q |
201 |
caacaaaggcaaagttttctgaaacaggaatttcacacgatatattgataaagtgtggagtagaagaagaaggatcaacatcaaagagtcaca |
293 |
Q |
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| T |
42021398 |
caacaaaggcaaagttttctgaaacaggaatttcacacgatatattgataaagtgtggagtagaagaagaaggatcaacatcaaagagtcaca |
42021490 |
T |
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