View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18314_high_13 (Length: 300)
Name: NF18314_high_13
Description: NF18314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18314_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 5018193 - 5018009
Alignment:
| Q |
10 |
agcaaagggataattgaaaaagacataggtgataggtgcatctatctcttgagtnnnnnnnnnnnnn--gtgtatctatctcattcatacctctctttgt |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
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| T |
5018193 |
agcaaagggataattgaaaaagacataggtgataggtgcatctatctcttgagtaaaaaaaaagaagaagtgtacctatctcattcatacctctctttgt |
5018094 |
T |
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| Q |
108 |
ttctattgagagaatattctttactaaagataaaataaattaacccatatgaataaagtataaagtgatataaaacattctcccc |
192 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5018093 |
ttctattgagagaatattctttacaaaagataaaataaattaacccatatgaataaagtataaagtgatataaaacattctcccc |
5018009 |
T |
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