View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18315_high_18 (Length: 499)

Name: NF18315_high_18
Description: NF18315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18315_high_18
NF18315_high_18
[»] chr5 (38 HSPs)
chr5 (1-318)||(39777089-39777405)
chr5 (138-314)||(32743840-32744015)
chr5 (327-458)||(291100-291231)
chr5 (323-454)||(12913802-12913933)
chr5 (327-454)||(19655161-19655288)
chr5 (352-454)||(16971172-16971274)
chr5 (352-453)||(3899867-3899968)
chr5 (341-454)||(29699384-29699497)
chr5 (376-454)||(2953242-2953320)
chr5 (332-434)||(16439146-16439248)
chr5 (381-454)||(2093945-2094018)
chr5 (352-453)||(26662427-26662529)
chr5 (352-453)||(26934022-26934124)
chr5 (352-454)||(28818945-28819047)
chr5 (328-458)||(30117832-30117962)
chr5 (323-434)||(3180088-3180198)
chr5 (352-434)||(16802472-16802554)
chr5 (405-452)||(32485630-32485677)
chr5 (405-454)||(13312272-13312321)
chr5 (327-408)||(19598335-19598416)
chr5 (400-460)||(16439140-16439200)
chr5 (327-386)||(16971220-16971279)
chr5 (327-373)||(13312267-13312313)
chr5 (400-454)||(19598340-19598394)
chr5 (350-424)||(38134411-38134485)
chr5 (362-454)||(2356312-2356401)
chr5 (13-100)||(32743707-32743791)
chr5 (317-414)||(39031199-39031296)
chr5 (411-460)||(39031238-39031287)
chr5 (425-482)||(39777031-39777088)
chr5 (376-460)||(228402-228486)
chr5 (327-386)||(2953266-2953325)
chr5 (327-386)||(3899915-3899974)
chr5 (397-448)||(7009401-7009452)
chr5 (401-466)||(291092-291158)
chr5 (320-373)||(12913892-12913945)
chr5 (400-448)||(17849221-17849269)
chr5 (327-371)||(22083001-22083045)
[»] chr8 (28 HSPs)
chr8 (327-454)||(5033164-5033291)
chr8 (327-453)||(35440978-35441104)
chr8 (327-454)||(33841599-33841726)
chr8 (327-461)||(10086760-10086894)
chr8 (327-454)||(45191135-45191262)
chr8 (327-434)||(8243416-8243523)
chr8 (323-434)||(34229640-34229751)
chr8 (327-454)||(5667100-5667227)
chr8 (327-460)||(43844473-43844604)
chr8 (352-460)||(39850983-39851091)
chr8 (327-454)||(8796425-8796552)
chr8 (352-458)||(6296633-6296739)
chr8 (323-434)||(4958599-4958708)
chr8 (376-434)||(34541831-34541889)
chr8 (327-386)||(5033237-5033296)
chr8 (387-434)||(35031642-35031689)
chr8 (400-454)||(5033169-5033223)
chr8 (327-373)||(5667186-5667232)
chr8 (400-454)||(43844545-43844599)
chr8 (401-454)||(5667105-5667158)
chr8 (328-373)||(10086846-10086891)
chr8 (327-394)||(2581828-2581895)
chr8 (327-386)||(33841594-33841653)
chr8 (327-386)||(35440972-35441031)
chr8 (400-454)||(8243464-8243518)
chr8 (400-454)||(33841667-33841721)
chr8 (400-454)||(35441045-35441099)
chr8 (376-445)||(31159903-31159972)
[»] chr1 (45 HSPs)
chr1 (327-454)||(48993925-48994052)
chr1 (327-460)||(29179599-29179732)
chr1 (323-434)||(9157309-9157420)
chr1 (327-454)||(32540756-32540883)
chr1 (327-458)||(17127568-17127699)
chr1 (327-454)||(5995372-5995499)
chr1 (350-454)||(33219599-33219703)
chr1 (327-434)||(37155049-37155156)
chr1 (317-414)||(36290455-36290552)
chr1 (323-434)||(4608995-4609106)
chr1 (327-424)||(1091582-1091679)
chr1 (320-408)||(44706838-44706926)
chr1 (376-454)||(15220863-15220941)
chr1 (352-454)||(29371396-29371498)
chr1 (331-433)||(45728294-45728396)
chr1 (350-436)||(46333972-46334058)
chr1 (352-454)||(49444921-49445021)
chr1 (381-434)||(1819517-1819570)
chr1 (327-400)||(21630045-21630118)
chr1 (327-434)||(48498418-48498525)
chr1 (352-434)||(5694918-5694999)
chr1 (352-434)||(8337879-8337961)
chr1 (315-395)||(28395628-28395708)
chr1 (367-434)||(741530-741597)
chr1 (352-434)||(34062237-34062319)
chr1 (356-434)||(47303427-47303505)
chr1 (352-434)||(48604975-48605057)
chr1 (327-386)||(48993920-48993979)
chr1 (400-454)||(9157318-9157372)
chr1 (400-450)||(21630054-21630104)
chr1 (400-454)||(45728295-45728349)
chr1 (400-454)||(48993993-48994047)
chr1 (327-434)||(19711208-19711313)
chr1 (382-434)||(28928807-28928859)
chr1 (323-386)||(17127563-17127626)
chr1 (323-386)||(29371444-29371507)
chr1 (327-386)||(49444916-49444975)
chr1 (400-458)||(17127640-17127698)
chr1 (328-386)||(29179601-29179659)
chr1 (400-454)||(29179673-29179727)
chr1 (327-372)||(5995459-5995504)
chr1 (327-372)||(46932000-46932045)
chr1 (327-372)||(46932072-46932116)
chr1 (315-371)||(15220902-15220958)
chr1 (410-454)||(36290493-36290537)
[»] chr4 (40 HSPs)
chr4 (320-454)||(23444277-23444411)
chr4 (327-453)||(51265448-51265574)
chr4 (341-454)||(47661859-47661972)
chr4 (327-454)||(35682169-35682296)
chr4 (327-454)||(6271705-6271832)
chr4 (376-454)||(42375062-42375140)
chr4 (317-450)||(47762601-47762734)
chr4 (327-434)||(26186044-26186149)
chr4 (382-448)||(25818387-25818453)
chr4 (352-454)||(53954638-53954740)
chr4 (327-414)||(30861822-30861909)
chr4 (382-436)||(28693949-28694003)
chr4 (328-454)||(44379934-44380060)
chr4 (352-434)||(55090024-55090106)
chr4 (352-424)||(40789207-40789279)
chr4 (327-374)||(2325068-2325115)
chr4 (315-386)||(47661918-47661989)
chr4 (376-434)||(47404613-47404671)
chr4 (376-434)||(50384133-50384191)
chr4 (382-434)||(31430489-31430541)
chr4 (382-434)||(52028607-52028659)
chr4 (326-386)||(53954686-53954746)
chr4 (315-386)||(23444260-23444331)
chr4 (410-460)||(5048886-5048936)
chr4 (400-454)||(26186090-26186144)
chr4 (321-383)||(44380009-44380071)
chr4 (326-386)||(35682242-35682302)
chr4 (323-358)||(25617980-25618015)
chr4 (327-386)||(42375086-42375145)
chr4 (382-425)||(45591447-45591490)
chr4 (327-389)||(3862619-3862681)
chr4 (400-454)||(3862622-3862676)
chr4 (327-389)||(3871376-3871438)
chr4 (400-454)||(3871379-3871433)
chr4 (400-454)||(23444345-23444399)
chr4 (327-373)||(30709989-30710035)
chr4 (400-454)||(51265453-51265507)
chr4 (385-434)||(24006098-24006147)
chr4 (315-352)||(54716349-54716386)
chr4 (342-434)||(31532717-31532809)
[»] chr7 (27 HSPs)
chr7 (327-454)||(11016872-11016999)
chr7 (327-454)||(38975808-38975935)
chr7 (327-434)||(41018256-41018363)
chr7 (330-443)||(15027548-15027661)
chr7 (327-450)||(4290548-4290671)
chr7 (352-454)||(42628323-42628425)
chr7 (327-404)||(45231908-45231985)
chr7 (387-451)||(48000705-48000769)
chr7 (382-454)||(48000795-48000867)
chr7 (327-434)||(34854723-34854830)
chr7 (321-408)||(30217508-30217594)
chr7 (352-434)||(4649348-4649432)
chr7 (327-424)||(27028831-27028928)
chr7 (387-445)||(6225542-6225600)
chr7 (352-422)||(10419486-10419556)
chr7 (327-373)||(11016958-11017004)
chr7 (342-408)||(22764754-22764820)
chr7 (352-424)||(7671949-7672021)
chr7 (415-454)||(34854786-34854825)
chr7 (415-454)||(41018319-41018358)
chr7 (391-434)||(41084208-41084251)
chr7 (327-386)||(42628371-42628430)
chr7 (400-454)||(11016877-11016931)
chr7 (352-434)||(29053342-29053424)
chr7 (400-454)||(38975813-38975867)
chr7 (330-372)||(48000827-48000869)
chr7 (327-372)||(38975895-38975940)
[»] chr3 (25 HSPs)
chr3 (327-454)||(30734410-30734537)
chr3 (323-434)||(33689175-33689286)
chr3 (327-448)||(47492061-47492182)
chr3 (327-460)||(51046075-51046208)
chr3 (327-454)||(41752967-41753094)
chr3 (320-434)||(43139737-43139851)
chr3 (328-454)||(50524706-50524832)
chr3 (323-430)||(55223231-55223338)
chr3 (352-454)||(1801454-1801556)
chr3 (341-434)||(50549992-50550085)
chr3 (391-454)||(45103117-45103180)
chr3 (323-386)||(30734401-30734464)
chr3 (352-434)||(30476502-30476584)
chr3 (328-454)||(30580764-30580890)
chr3 (352-434)||(47677283-47677365)
chr3 (362-430)||(29031746-29031814)
chr3 (376-448)||(30904296-30904368)
chr3 (330-436)||(18321657-18321763)
chr3 (400-454)||(33689184-33689238)
chr3 (352-404)||(39385746-39385798)
chr3 (400-466)||(50549970-50550037)
chr3 (327-372)||(1801449-1801494)
chr3 (410-454)||(18321659-18321703)
chr3 (400-460)||(30580832-30580892)
chr3 (323-351)||(47677263-47677291)
[»] scaffold0586 (1 HSPs)
scaffold0586 (323-454)||(7055-7185)
[»] chr2 (26 HSPs)
chr2 (327-454)||(16514427-16514554)
chr2 (327-454)||(29508698-29508826)
chr2 (362-454)||(14229361-14229453)
chr2 (352-454)||(38933615-38933717)
chr2 (343-454)||(6721970-6722081)
chr2 (352-454)||(6217232-6217334)
chr2 (361-454)||(14470600-14470693)
chr2 (342-437)||(8534164-8534259)
chr2 (323-454)||(24115919-24116050)
chr2 (323-386)||(14470591-14470654)
chr2 (341-434)||(15011297-15011390)
chr2 (352-436)||(2893991-2894075)
chr2 (382-454)||(14892318-14892390)
chr2 (382-454)||(37961764-37961836)
chr2 (323-370)||(45213892-45213939)
chr2 (352-434)||(2828612-2828694)
chr2 (315-383)||(14892339-14892407)
chr2 (352-452)||(29925580-29925680)
chr2 (399-459)||(33018620-33018680)
chr2 (335-434)||(37762029-37762128)
chr2 (416-454)||(45213892-45213930)
chr2 (400-448)||(6721965-6722013)
chr2 (327-386)||(16514500-16514559)
chr2 (327-370)||(29508693-29508736)
chr2 (327-372)||(6217227-6217272)
chr2 (327-408)||(9173035-9173116)
[»] scaffold0016 (2 HSPs)
scaffold0016 (352-454)||(49711-49813)
scaffold0016 (327-386)||(49706-49765)
[»] chr6 (15 HSPs)
chr6 (352-454)||(24618609-24618711)
chr6 (323-454)||(17750902-17751032)
chr6 (376-454)||(12343152-12343230)
chr6 (320-434)||(551193-551307)
chr6 (376-454)||(13043509-13043587)
chr6 (327-421)||(24587464-24587558)
chr6 (352-434)||(10521877-10521959)
chr6 (400-454)||(24587469-24587523)
chr6 (385-434)||(2315332-2315381)
chr6 (352-409)||(31654333-31654390)
chr6 (323-386)||(17750978-17751041)
chr6 (399-454)||(24975760-24975815)
chr6 (1-39)||(1094535-1094573)
chr6 (327-373)||(24618604-24618650)
chr6 (398-458)||(7384492-7384552)
[»] scaffold0180 (2 HSPs)
scaffold0180 (382-454)||(19130-19202)
scaffold0180 (321-386)||(19119-19184)
[»] scaffold0161 (1 HSPs)
scaffold0161 (327-454)||(27228-27355)
[»] scaffold1033 (1 HSPs)
scaffold1033 (376-433)||(2265-2322)
[»] scaffold1029 (1 HSPs)
scaffold1029 (376-433)||(2265-2322)
[»] scaffold0536 (1 HSPs)
scaffold0536 (341-445)||(4909-5010)
[»] scaffold0047 (1 HSPs)
scaffold0047 (352-434)||(63785-63867)
[»] scaffold0481 (1 HSPs)
scaffold0481 (382-430)||(2919-2967)


Alignment Details
Target: chr5 (Bit Score: 290; Significance: 1e-162; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 39777405 - 39777089
Alignment:
Q  1 actcgaggtctgaacacgatggagcttcactaacaatgcccaaaattatggtagaagaacgatagaaaagatgagagcttaatagaaagcatgatgagct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39777405 actcgaggtctgaacacgatggagcttcaataacaatgcccaaaattatggtagaagaacgatagaaaagatgagagcttaatagaaagcatgatgagct 39777306  T
Q  101 tcttttctatatgttccatcttctctctttaatatagagtatatatatgatgctagtggcacaaagtaaatgaatggccctatctttccgttgcaagatt 200  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39777305 tcttttctatatgttccctcttctctcttttata-agagtatatatatgatgctagtggcacaaactaaatgaatggccctatctttccgttgcaagatt 39777207  T
Q  201 tcttagcaatataaaggatatttatggcaatgaaaactgatggaataaaggttgattttttcatgtaacgtttagccaattgaatatgaagaattaagga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39777206 tcttagcaatataaaggatatttatggcaatgaaaactgatggaataaaggttgattttttcatgtaacgtttagccaattgaatatgaagaattaagga 39777107  T
Q  301 gacaaacaatagtaggta 318  Q
    ||||||||||| ||||||    
T  39777106 gacaaacaatattaggta 39777089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 32743840 - 32744015
Alignment:
Q  138 agtatatatatgatgctagtggcacaaagtaaatgaatggccctatctttccgttgcaagatttcttagcaatataaaggatatttatggcaatgaaaac 237  Q
    ||||||||| ||| |  |||||||||||  ||||||||||| ||||||||||||||||| |||||||||||| |||||  ||||| ||||||||||||||    
T  32743840 agtatatatgtgacgtcagtggcacaaacaaaatgaatggctctatctttccgttgcaacatttcttagcaacataaaaaatattaatggcaatgaaaac 32743939  T
Q  238 tgatggaataaaggttgattttttcatgtaacgtttagccaattgaatatgaagaattaaggagacaaacaatagta 314  Q
    | ||||| |||  |||  ||||||| ||||| ||||||| ||||||||||||||| ||||| || ||||||||||||    
T  32743940 taatggattaagcgtttgttttttc-tgtaatgtttagctaattgaatatgaagatttaagtaggcaaacaatagta 32744015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 458
Target Start/End: Original strand, 291100 - 291231
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||| ||||| |||||||||||| ||| |||| ||||||||||||    
T  291100 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtatttctttctctttcacaaacattgtgacattgtgattgat 291199  T
Q  427 caatgtcatcaatgtcacccaactctatatca 458  Q
    |||||||| |||||||||||||||||||||||    
T  291200 caatgtcaccaatgtcacccaactctatatca 291231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 323 - 454
Target Start/End: Original strand, 12913802 - 12913933
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    |||||||||||| ||||  ||||||||| |||||||| ||||| |||||||  |||| ||||||| ||||||||||||||||||||  ||| ||||||||    
T  12913802 ttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtgtatctctctctttcacaagcattatgacattgtgat 12913901  T
Q  423 tgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||| |||| ||| |||||||||||||||||||    
T  12913902 tgaccaatatcaccaatgtcacccaactctat 12913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 19655161 - 19655288
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||      
T  19655161 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgga 19655260  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| ||||||||| |||||||||    
T  19655261 caatgtcaccaatgtcactcaactctat 19655288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 16971172 - 16971274
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  16971172 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 16971271  T
Q  452 tat 454  Q
    |||    
T  16971272 tat 16971274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 3899867 - 3899968
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  3899867 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 3899966  T
Q  452 ta 453  Q
    ||    
T  3899967 ta 3899968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 454
Target Start/End: Original strand, 29699384 - 29699497
Alignment:
Q  341 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 440  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| ||||     
T  29699384 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaata 29699483  T
Q  441 tcacccaactctat 454  Q
    ||||||||||||||    
T  29699484 tcacccaactctat 29699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 2953242 - 2953320
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| |||||||||||||||||||    
T  2953242 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctat 2953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 434
Target Start/End: Original strand, 16439146 - 16439248
Alignment:
Q  332 atagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatg 431  Q
    |||||||| ||| | |||| ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatg 16439245  T
Q  432 tca 434  Q
    |||    
T  16439246 tca 16439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 2094018 - 2093945
Alignment:
Q  381 cttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||| ||||||||||||||    
T  2094018 cttgtgtttctctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctat 2093945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 26662427 - 26662529
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga-ttgatcaatgtcatcaatgtcacccaact 450  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| ||||||| |||| |||||||| |||| ||||||||||    
T  26662427 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26662526  T
Q  451 cta 453  Q
    |||    
T  26662527 cta 26662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 26934022 - 26934124
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga-ttgatcaatgtcatcaatgtcacccaact 450  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| ||||||| |||| |||||||| |||| ||||||||||    
T  26934022 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26934121  T
Q  451 cta 453  Q
    |||    
T  26934122 cta 26934124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 28818945 - 28819047
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    ||||||||  |||| |||||||  |||||||||| |||||||||||||||||||||| |||| ||| ||||||| |||||||| |||| |||| ||||||    
T  28818945 tgacattggtcaatcacaatgtcacaatacttgtatttctctctctttcacaagcattgtgacattatgattgaccaatgtcaccaatatcactcaactc 28819044  T
Q  452 tat 454  Q
    |||    
T  28819045 tat 28819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 328 - 458
Target Start/End: Complemental strand, 30117962 - 30117832
Alignment:
Q  328 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 427  Q
    |||||||||||| | |||||||| ||| ||||  |||| | ||||   |||| ||||||||||||||| ||||| || ||| |||| |||||||||| ||    
T  30117962 tgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtgtttctctctttttcataaacattgtgacattgtgattggtc 30117863  T
Q  428 aatgtcatcaatgtcacccaactctatatca 458  Q
    ||| ||| |||||||||||||||||||||||    
T  30117862 aatatcaccaatgtcacccaactctatatca 30117832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 434
Target Start/End: Complemental strand, 3180198 - 3180088
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    |||||| |||||||||| ||| |||||| ||||||||  |||| ||||||   |||| |||||||||||||||||||||||| ||| |||| ||| ||||    
T  3180198 ttgtgtcacatagagtt-ggtaacattggtgacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattatgat 3180100  T
Q  423 tgatcaatgtca 434  Q
    ||||||||||||    
T  3180099 tgatcaatgtca 3180088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 16802472 - 16802554
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||| ||||| |||||||  ||||| |||||||||||||||||| |||||||| |||| ||| |||||| |||||||||    
T  16802472 tgacattggccaatcacaatgtaacaatatttgtgtttctctctcttttacaagcattgtgacattctgattggtcaatgtca 16802554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 32485630 - 32485677
Alignment:
Q  405 gcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactct 452  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  32485630 gcattgtgatattgtgattgatcaatgtcaccaatgtcacccaactct 32485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 454
Target Start/End: Complemental strand, 13312321 - 13312272
Alignment:
Q  405 gcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  13312321 gcattgtgacattgtgattgatcaatgtcatcaatgtcacctaactctat 13312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 19598335 - 19598416
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 408  Q
    ||||||||||||| ||| |||||| ||||||||  |||| |||||    |||| ||||||||||||||||||||||||||||    
T  19598335 gtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtgtttctctctctttcacaagcat 19598416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 16439200 - 16439140
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 460  Q
    ||||||||| |||| ||||||||||| |||||||| |||| | ||||||||||||||||||    
T  16439200 cacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctatatcatc 16439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 16971279 - 16971220
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  16971279 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 16971220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 13312267 - 13312313
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||    
T  13312267 gtgacatagagttaggtgacattgatgacattgatcaatcacaatgt 13312313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 19598394 - 19598340
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| ||| |||||||||||| |||||||| |||||| ||||||||||||    
T  19598394 cacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctat 19598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 38134485 - 38134411
Alignment:
Q  350 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 424  Q
    ||||| |||| ||||| |||||||  |||| ||||||||||| |||||||||| ||||| |||| ||||||||||    
T  38134485 gatgatattggccaatcacaatgtcacaatgcttgtgtttctttctctttcactagcattgtgacattgtgattg 38134411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 454
Target Start/End: Original strand, 2356312 - 2356401
Alignment:
Q  362 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||||||||||||  ||| ||||||||  ||||||||||| |||||| |||| | ||||||||  |||||||| |||||||| ||||||||||    
T  2356312 caattacaatgttataatgcttgtgtt--tctctctttcataagcattgtgaca-tgtgattggccaatgtcaccaatgtcatccaactctat 2356401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 32743707 - 32743791
Alignment:
Q  13 aacacgatggagcttcactaacaatgcccaaaattatggtagaagaacgatagaaaagatgagagcttaatagaaagcatgatgagct 100  Q
    |||||||||||||||||| |||||| ||||||||||   |  |||||| | | | |||| ||||||||||||||||||||||| ||||    
T  32743707 aacacgatggagcttcacaaacaatacccaaaatta---tcaaagaacaagaaagaagaagagagcttaatagaaagcatgatcagct 32743791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 414
Target Start/End: Complemental strand, 39031296 - 39031199
Alignment:
Q  317 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 414  Q
    |||||||||  |||||||||||  |||||||||| ||||| ||| |||| ||||| |   |||| |||| ||||||| |||||||||||||| |||||    
T  39031296 tagtatttggatgacatagagtggggtgacattggtgacactgatcaatcacaatatcataatatttgtatttctctttctttcacaagcattgtgat 39031199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 460
Target Start/End: Original strand, 39031238 - 39031287
Alignment:
Q  411 tgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 460  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  39031238 tgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatc 39031287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 39777088 - 39777031
Alignment:
Q  425 atcaatgtcatcaatgtcacccaactctatatcatcaagtatccaacacacttaattc 482  Q
    |||||||||| ||||||||||||||||||| ||| | | ||||||||||| |||||||    
T  39777088 atcaatgtcaccaatgtcacccaactctatgtcacccaatatccaacacatttaattc 39777031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 460
Target Start/End: Original strand, 228402 - 228486
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 460  Q
    ||||| |||||||| ||||||||| ||||||||  ||| |||||||||||  ||| |||||||| | |||||||| ||| |||||    
T  228402 caatatttgtgtttttctctcttttacaagcattttgacattgtgattgacaaatctcatcaatattacccaactttatgtcatc 228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 2953325 - 2953266
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| ||||||    
T  2953325 gtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 2953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 3899974 - 3899915
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  3899974 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 7009401 - 7009452
Alignment:
Q  397 tttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 448  Q
    |||||||||||| |||||||||||||||| |||| ||| |||||||| ||||    
T  7009401 tttcacaagcattgtgatattgtgattgaccaatatcaccaatgtcatccaa 7009452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 466
Target Start/End: Complemental strand, 291158 - 291092
Alignment:
Q  401 acaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca-tcaagtat 466  Q
    |||||||| |||  ||||||||||  |||||||| ||||||||||||||||||| ||| ||||||||    
T  291158 acaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcactcaagtat 291092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 12913945 - 12913892
Alignment:
Q  320 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    |||||||||||||||||||| |||||||||| ||| ||||  |||| |||||||    
T  12913945 tatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgt 12913892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 17849221 - 17849269
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 448  Q
    ||||||||| | |||||||||||||| |||||||| |||| ||||||||    
T  17849221 cacaagcattgcgatattgtgattgaccaatgtcaccaatatcacccaa 17849269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 22083001 - 22083045
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaat 371  Q
    |||||||||||||  |||||||| ||||||||||||||| |||||    
T  22083001 gtgacatagagttgtgtgacattaatgacattgaccaatcacaat 22083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 5033164 - 5033291
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  5033164 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 5033263  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||||||||||||||    
T  5033264 caatgtcaccaatgtcacccaactctat 5033291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 35441104 - 35440978
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  35441104 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 35441005  T
Q  427 caatgtcatcaatgtcacccaactcta 453  Q
    |||||||| ||||||||||||||||||    
T  35441004 caatgtcaccaatgtcacccaactcta 35440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 33841726 - 33841599
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  33841726 gtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacaatgtgattggt 33841627  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||||||||||||||    
T  33841626 caatgtcaccaatgtcacccaactctat 33841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 327 - 461
Target Start/End: Original strand, 10086760 - 10086894
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    |||||||||| || |||||||||  ||||||||  |||| |||||||   |||  ||||||||||||||||||||||| ||| |||| |||||||||| |    
T  10086760 gtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattggt 10086859  T
Q  427 caatgtcatcaatgtcacccaactctatatcatca 461  Q
    |||||||| ||||||||||||||||||| ||||||    
T  10086860 caatgtcaccaatgtcacccaactctatgtcatca 10086894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 45191262 - 45191135
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| | ||| |||| |||||||||||||| | |||||| ||||  |||||||||||||||||||| |||||| |||  ||||||||| ||    
T  45191262 gtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtgtttctctctctttcataagcattgtggcattgtgattaat 45191163  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||| ||| ||||||||||    
T  45191162 caatgtcaccaatatcatccaactctat 45191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 8243523 - 8243416
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||| |||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  ||||||||||||    
T  8243523 gtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattgat 8243424  T
Q  427 caatgtca 434  Q
    ||||||||    
T  8243423 caatgtca 8243416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 34229640 - 34229751
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||||||||||| |||||||||  ||||||    |||| |||||||   ||| |||||||||||||||||||||||||||| |||||||||||||    
T  34229640 ttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtgtttctctctctttcacaagcattgtgatattgtgat 34229739  T
Q  423 tgatcaatgtca 434  Q
    ||| ||||||||    
T  34229740 tgaccaatgtca 34229751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 5667100 - 5667227
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| | |||||||| ||||||||  |||| |||||||  |||| ||||| ||||||||||||||||||||||  ||| ||||| ||||      
T  5667100 gtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgtatttctctctctttcacaagcattatgacattgtaattggc 5667199  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||| | ||||||||    
T  5667200 caatgtcaccaatgtcatcaaactctat 5667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 460
Target Start/End: Complemental strand, 43844604 - 43844473
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| | |||||||| ||| ||||| |||| |||||||  |||| ||||||||||||||||  ||||||||||  ||| ||| ||||| |     
T  43844604 gtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtgtttctctctc--tcacaagcatcctgacattatgattaac 43844507  T
Q  427 caatgtcatcaatgtcacccaactctatatcatc 460  Q
    |||| |||||||| |||||||||||||| |||||    
T  43844506 caatatcatcaatatcacccaactctatgtcatc 43844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 39850983 - 39851091
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  | |||||||||||| ||||||||| ||||||||| |||||     
T  39850983 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattataatattgtgattggtcaatgtcaccaatgtcactcaactt 39851082  T
Q  452 tatatcatc 460  Q
    ||| |||||    
T  39851083 tatgtcatc 39851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 8796425 - 8796552
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| ||||| |||  ||| ||||  |||| |||||||  |||| ||||||||||||| |||||||||||||| |||| ||| |||||| |    
T  8796425 gtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtgtttctctatctttcacaagcattgtgacattttgattggt 8796524  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||| ||||| | ||||||    
T  8796525 caatgtcaccaatatcacctagctctat 8796552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 458
Target Start/End: Original strand, 6296633 - 6296739
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||||||||| |||||||   ||| ||||||||||||||||||||||||| || |||| ||| | |||||  |||||||  ||||||| |||||||    
T  6296633 tgacattgaccaatcacaatgtcataatgcttgtgtttctctctctttcacaagtattgtgacattataattgactaatgtcactaatgtcatccaactc 6296732  T
Q  452 tatatca 458  Q
    |||||||    
T  6296733 tatatca 6296739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 4958599 - 4958708
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    |||||||||||||| |||| ||| ||||||||||||| ||||| |||||||   |||  |||||||||||||||||||||||| || ||||  |||||||    
T  4958599 ttgtgtgacatagaatttg-tgatattgatgacattggccaatcacaatgtcataatgtttgtgtttctctctctttcacaagtattgtga-cttgtgat 4958696  T
Q  423 tgatcaatgtca 434  Q
    || |||||||||    
T  4958697 tggtcaatgtca 4958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 34541889 - 34541831
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  34541889 caatgcttgtgtttctctctctttcacaagcattgtgatattatgattggccaatgtca 34541831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 5033296 - 5033237
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  5033296 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 5033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 35031689 - 35031642
Alignment:
Q  387 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||    
T  35031689 tttctctctctttcacaagcattgcgacattgtgattgatcaatgtca 35031642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 5033223 - 5033169
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  5033223 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 5033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 5667232 - 5667186
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  5667232 gtgacatagagtttgatgacattggtgacattggccaattacaatgt 5667186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 43844545 - 43844599
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  43844545 cacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctat 43844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 5667158 - 5667105
Alignment:
Q  401 acaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||| ||||||||||| |||||||| |||||||| ||||||||||    
T  5667158 acaagcattgtgacattgtgattgaccaatgtcaccaatgtcatccaactctat 5667105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 10086891 - 10086846
Alignment:
Q  328 tgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgt 10086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 2581828 - 2581895
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctc 394  Q
    |||||||||| || |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||    
T  2581828 gtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtgtttctctc 2581895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 33841594 - 33841653
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||  |||| ||||||    
T  33841594 gtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtg 33841653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 35440972 - 35441031
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  35440972 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 35441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 8243464 - 8243518
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||| ||| |||| |||||||||||||||||||    
T  8243464 cacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctat 8243518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 33841667 - 33841721
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||| |||||| ||||||||| |||||||||||||||||||    
T  33841667 cacaagcattgtggcattctgattggtcaatgtcaccaatgtcacccaactctat 33841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 35441045 - 35441099
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  35441045 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 35441099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 31159903 - 31159972
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacc 445  Q
    ||||| || |||||||||||||||||||||||| |||| ||| ||||||   ||||||| |||| |||||    
T  31159903 caatatttttgtttctctctctttcacaagcattgtgacattatgattggcgaatgtcaccaatatcacc 31159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 48994052 - 48993925
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  48994052 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 48993953  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||||||||||||||    
T  48993952 caatgtcaccaatgtcacccaactctat 48993925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 327 - 460
Target Start/End: Complemental strand, 29179732 - 29179599
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  29179732 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 29179633  T
Q  427 caatgtcatcaatgtcacccaactctatatcatc 460  Q
    || ||||| ||||||||||||||||||| |||||    
T  29179632 cagtgtcaccaatgtcacccaactctatgtcatc 29179599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 9157309 - 9157420
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||||||||||| |||||||||| | |||||||||||| |||||||  |||| |||||||||||||||||||| ||||||| |||||||||||||    
T  9157309 ttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttctcaagcattgtgatattgtgat 9157408  T
Q  423 tgatcaatgtca 434  Q
    ||||||||||||    
T  9157409 tgatcaatgtca 9157420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 32540883 - 32540756
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    |||||||||| || | |||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||      
T  32540883 gtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 32540784  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    ||||| || |||||||||||||||||||    
T  32540783 caatgccaccaatgtcacccaactctat 32540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 327 - 458
Target Start/End: Complemental strand, 17127699 - 17127568
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    |||| |||||||| |||||||||  |||||||||||||| | |||||  |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  17127699 gtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 17127600  T
Q  427 caatgtcatcaatgtcacccaactctatatca 458  Q
    ||||||||  ||||||||| ||||||||||||    
T  17127599 caatgtcactaatgtcacctaactctatatca 17127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 5995372 - 5995499
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||||| |||||||| | |||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  |||||||||| |    
T  5995372 gtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattggt 5995471  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||| ||||||||||    
T  5995472 caatgtcaccaatgtcatccaactctat 5995499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 33219599 - 33219703
Alignment:
Q  350 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaac 449  Q
    ||||||||||| |||| |||||||| |||| ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| |||||||| |||||    
T  33219599 gatgacattgatcaatcacaatgttacaatgcttgtgtttttctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatgtcatccaac 33219698  T
Q  450 tctat 454  Q
    |||||    
T  33219699 tctat 33219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 327 - 434
Target Start/End: Original strand, 37155049 - 37155156
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||  |||| ||||||||||||||||||||||||| || |||| ||||||||||      
T  37155049 gtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagtattgtgacattgtgattggc 37155148  T
Q  427 caatgtca 434  Q
    ||||||||    
T  37155149 caatgtca 37155156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 414
Target Start/End: Complemental strand, 36290552 - 36290455
Alignment:
Q  317 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 414  Q
    ||||| ||| ||||||||||||| |||||||||| || ||||||||||| |||||||  ||||| ||||||||||||||||||||||||||| |||||    
T  36290552 tagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaatatttgtgtttctctctctttcacaagcattgtgat 36290455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 4608995 - 4609106
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    |||||||| || ||||| |||||||| | ||||||||||| || |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||    
T  4608995 ttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgat 4609094  T
Q  423 tgatcaatgtca 434  Q
    ||| ||||||||    
T  4609095 tgaccaatgtca 4609106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 327 - 424
Target Start/End: Complemental strand, 1091679 - 1091582
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 424  Q
    ||||||||||||| ||||| |||| |||| ||||||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  1091679 gtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 1091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 44706926 - 44706838
Alignment:
Q  320 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 408  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||    
T  44706926 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcat 44706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 15220863 - 15220941
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||| ||| |||||||||||||||||||    
T  15220863 caatgcttgtgtttctctctctttcacaagcattgtgagattgtgattggccaatatcaccaatgtcacccaactctat 15220941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 29371396 - 29371498
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||| | |||    
T  29371396 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctc 29371495  T
Q  452 tat 454  Q
    |||    
T  29371496 tat 29371498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 331 - 433
Target Start/End: Original strand, 45728294 - 45728396
Alignment:
Q  331 catagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 430  Q
    ||||||||| ||||| |||| ||| |||||||||| ||||| |  |||| ||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaagcattatgacattgtgattgaccaat 45728393  T
Q  431 gtc 433  Q
    |||    
T  45728394 gtc 45728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 46334058 - 46333972
Alignment:
Q  350 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 436  Q
    |||||||||||||||| |||||||  |||| ||||||||| |||||||||||||||||| |||| ||||||||||  ||||||||||    
T  46334058 gatgacattgaccaatcacaatgtcacaatgcttgtgtttttctctctttcacaagcattgtgacattgtgattggccaatgtcatc 46333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 454
Target Start/End: Complemental strand, 49445021 - 49444921
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||  ||||||||| || | ||||||||||||| |||||| ||||||||||||||||    
T  49445021 tgacattggccaatcacaatgccacaatgcttgtgtttctctctct--cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactc 49444924  T
Q  452 tat 454  Q
    |||    
T  49444923 tat 49444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 1819570 - 1819517
Alignment:
Q  381 cttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  1819570 cttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtca 1819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 400
Target Start/End: Original strand, 21630045 - 21630118
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttc 400  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  21630045 gtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttc 21630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 434
Target Start/End: Original strand, 48498418 - 48498525
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||  ||||||||  |||| | |||    ||||  |||||||||||||||||||||||||||||| | |||||||||| |    
T  48498418 gtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtgtttctctctctttcacaagcatggtaacattgtgattggt 48498517  T
Q  427 caatgtca 434  Q
    ||||||||    
T  48498518 caatgtca 48498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 5694999 - 5694918
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  5694999 tgacattggtcaattacaatgtcacaatatttgtgtttctctctctttcacaagcat-ttaatattgtgattgaccaatgtca 5694918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 8337961 - 8337879
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||||||| ||||||   ||||  ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  8337961 tgacattgaccaatcacaatgccacaatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 8337879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 28395628 - 28395708
Alignment:
Q  315 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctct 395  Q
    ||||| ||||| || ||||||||||  ||||||||| |||||||||||||| |||||||  |||| |||||||||||||||    
T  28395628 ggtagcatttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctct 28395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 741597 - 741530
Alignment:
Q  367 acaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  741597 acaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgggcaatgtca 741530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 34062237 - 34062319
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||| ||||| ||||||   |||| ||| |||||||||||||||||||| ||| |||| |||||||||| |||||||||    
T  34062237 tgacattggccaatcacaatgccacaatgcttatgtttctctctctttcacaaacattgtgacattgtgattggtcaatgtca 34062319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 47303427 - 47303505
Alignment:
Q  356 attgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||| |||||||   |||  ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  47303427 attgaccaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 47303505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 48605057 - 48604975
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||| ||||||| |||||  |||| |||| |||||||||||||||||||  || |||| ||||||||||| ||||||||    
T  48605057 tgacattggccaattataatgtcacaatgcttgcgtttctctctctttcacaaatattgtgacattgtgattgaccaatgtca 48604975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 48993920 - 48993979
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  48993920 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 48993979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 9157372 - 9157318
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||| |||||||||| ||||||| | |||||||||||||||||||    
T  9157372 cacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctat 9157318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 21630104 - 21630054
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaact 450  Q
    ||||||||| |||| |||||||||| ||||||||| |||||||||||||||    
T  21630104 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaact 21630054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 45728349 - 45728295
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  45728349 cacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctat 45728295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 48993993 - 48994047
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  48993993 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48994047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 19711313 - 19711208
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    |||| ||| ||||||||||||||| | |||||| |  ||||||||||  |||| ||| |||||||  |||||||||| |||| || | |||||||||| |    
T  19711313 gtgatataaagtttggtgacattggtaacattggctgattacaatgtcacaattcttatgtttct--ctctttcacatgcattgtaacattgtgattggt 19711216  T
Q  427 caatgtca 434  Q
    ||||||||    
T  19711215 caatgtca 19711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 28928859 - 28928807
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||||||||||||||||||||  |||| ||||||||||  ||||||||    
T  28928859 ttgtgtttctctctctttcacaagcactgtgacattgtgattggccaatgtca 28928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 17127563 - 17127626
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    |||||||| |||||||| |||||||||  |||||||||||||| |||||||  |||| ||||||    
T  17127563 ttgtgtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtg 17127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 29371507 - 29371444
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||||| | |||||||||| ||| |||||||||| |||||||  |||| ||||||    
T  29371507 ttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtg 29371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 49444916 - 49444975
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| |||||| || |||| |||||||| |||| ||||||    
T  49444916 gtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg 49444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 17127640 - 17127698
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca 458  Q
    ||||||||| |||| ||| |||||| |||||||||  ||||||||| ||||||||||||    
T  17127640 cacaagcattgtgacattttgattggtcaatgtcactaatgtcacctaactctatatca 17127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 29179601 - 29179659
Alignment:
Q  328 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||  |||| ||||||    
T  29179601 tgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtg 29179659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 29179673 - 29179727
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  29179673 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 29179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 5995504 - 5995459
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    ||||||||||||| | |||||||| |||||||||||||| ||||||    
T  5995504 gtgacatagagttggatgacattggtgacattgaccaatcacaatg 5995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 46932000 - 46932045
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  46932000 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 46932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 46932116 - 46932072
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  46932116 gtgacatagagtt-ggtgacattggtgacattgaccaatcacaatg 46932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15220958 - 15220902
Alignment:
Q  315 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaat 371  Q
    ||||| ||||| ||||||||||||| |||||||||| ||| |||| ||||| |||||    
T  15220958 ggtagcatttgggtgacatagagttgggtgacattggtgatattggccaatcacaat 15220902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 36290493 - 36290537
Alignment:
Q  410 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||||| |||||| || |||||||||||||||||||    
T  36290493 gtgacattgtgattggtcaatgccaccaatgtcacccaactctat 36290537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 320 - 454
Target Start/End: Complemental strand, 23444411 - 23444277
Alignment:
Q  320 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 419  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||    
T  23444411 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 23444312  T
Q  420 gattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||| ||||||||| |||||||||||||||||||    
T  23444311 gattggtcaatgtcaccaatgtcacccaactctat 23444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 51265448 - 51265574
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||| |||||| |    
T  51265448 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggt 51265547  T
Q  427 caatgtcatcaatgtcacccaactcta 453  Q
    |||||||| ||||||||||||||||||    
T  51265548 caatgtcaccaatgtcacccaactcta 51265574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 341 - 454
Target Start/End: Original strand, 47661859 - 47661972
Alignment:
Q  341 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 440  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||    
T  47661859 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatg 47661958  T
Q  441 tcacccaactctat 454  Q
    ||||||||||||||    
T  47661959 tcacccaactctat 47661972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 35682169 - 35682296
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| ||||| |||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  35682169 gtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 35682268  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||||| ||||||||    
T  35682269 caatgtcaccaatgtcacctaactctat 35682296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 6271705 - 6271832
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||||||||||      
T  6271705 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 6271804  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||| |||| |||||||||    
T  6271805 caatgtcaccaatatcactcaactctat 6271832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 42375062 - 42375140
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  42375062 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctat 42375140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 317 - 450
Target Start/End: Original strand, 47762601 - 47762734
Alignment:
Q  317 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatat 416  Q
    ||||||||| ||||||||||| |  |||| |||  |||||||||||||| |||||||| ||||  || |||||||||||||||||||||||| |||| ||    
T  47762601 tagtatttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatgtttatgtttctctctctttcacaagcattgtgacat 47762700  T
Q  417 tgtgattgatcaatgtcatcaatgtcacccaact 450  Q
    | || |||| |||||||| |||| ||| ||||||    
T  47762701 tatggttgaccaatgtcaccaatatcatccaact 47762734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 26186149 - 26186044
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||| |  |||| |||||||||||  ||||||||||||||| |||| |||||||||||     
T  26186149 gtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattgac 26186052  T
Q  427 caatgtca 434  Q
    ||||||||    
T  26186051 caatgtca 26186044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 25818453 - 25818387
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 448  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  25818453 ttgtgtttctctctctttcacaatcattgtgacattgtgattgaccaatgtcatcaatgtcacccaa 25818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 53954638 - 53954740
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| |||||||  |||| || ||||||||| ||||||||||||||| |||| ||||| ||||  |||||||| ||||||||||||||||    
T  53954638 tgacattggccaatcacaatgtcacaatgctagtgtttctcactctttcacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactc 53954737  T
Q  452 tat 454  Q
    |||    
T  53954738 tat 53954740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 30861909 - 30861822
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 414  Q
    ||||||||||||| | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||||    
T  30861909 gtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgat 30861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 436
Target Start/End: Complemental strand, 28694003 - 28693949
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 436  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  28694003 ttgtgtttctctctctttcacaaacattgtgatattgtgattggtcaatgtcatc 28693949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 454
Target Start/End: Original strand, 44379934 - 44380060
Alignment:
Q  328 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 427  Q
    ||||||||||||  |||||||||  ||||||| ||||||| |||||  |||| |||| |||||||||| ||| | ||| || || | |||||||||| ||    
T  44379934 tgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttgcgtttctctctattttataagtattgtaacattgtgattggtc 44380033  T
Q  428 aatgtcatcaatgtcacccaactctat 454  Q
    ||| ||| ||||||||| |||||||||    
T  44380034 aatatcaccaatgtcactcaactctat 44380060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 55090106 - 55090024
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||  |||| |||||||  |||| ||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  55090106 tgacattggtcaatcacaatgtcacaatgcttgtgtctctctctctttcacaagcattgtgacattgtgattgaccaatgtca 55090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 40789207 - 40789279
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 424  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  40789207 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 40789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 2325115 - 2325068
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgtt 374  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  2325115 gtgacatagagtttggtgacattgatgacattgacaaatcacaatgtt 2325068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 386
Target Start/End: Complemental strand, 47661989 - 47661918
Alignment:
Q  315 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  47661989 ggtagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 47661918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 47404671 - 47404613
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||| |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  47404671 caatgcttgggtttctctctctttcacaagcattgtgacattgtgattgaccaatgtca 47404613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 50384191 - 50384133
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  50384191 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 50384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 31430541 - 31430489
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||||||||||||| |||||| |||| |||||||||| |||||||||    
T  31430541 ttgtgtttctctctctttcataagcattgtgacattgtgattggtcaatgtca 31430489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 52028607 - 52028659
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  52028607 ttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 52028659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 53954746 - 53954686
Alignment:
Q  326 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||  |||| ||||||    
T  53954746 tgtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtg 53954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 23444260 - 23444331
Alignment:
Q  315 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||| ||||| || |||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  23444260 ggtagcatttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 23444331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 5048886 - 5048936
Alignment:
Q  410 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 460  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||| |||||    
T  5048886 gtgacattatgattgaccaatgtcatcaatgtcacccaactctatgtcatc 5048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 26186090 - 26186144
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||    
T  26186090 cacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctat 26186144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 44380071 - 44380009
Alignment:
Q  321 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 383  Q
    ||||| |||||||||||||  ||||||||| ||| |||||||||| |||||||| ||||||||    
T  44380071 atttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatactt 44380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 35682302 - 35682242
Alignment:
Q  326 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    |||||||||||||| |||||||||| ||||||||||| || |||||||  |||| ||||||    
T  35682302 tgtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtg 35682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 358
Target Start/End: Original strand, 25617980 - 25618015
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacatt 358  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25617980 ttgtgtgacatagagttgggtgacattgatgacatt 25618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 42375145 - 42375086
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||  |||| ||||||    
T  42375145 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtg 42375086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 425
Target Start/End: Complemental strand, 45591490 - 45591447
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattga 425  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||    
T  45591490 ttgtgtttctctctctttcacaagcattgtgacattatgattga 45591447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 3862681 - 3862619
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 389  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3862681 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3862619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 3862622 - 3862676
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  3862622 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 3862676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 3871438 - 3871376
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 389  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3871438 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 3871379 - 3871433
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  3871379 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 3871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 23444345 - 23444399
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  23444345 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 23444399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 30710035 - 30709989
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||    
T  30710035 gtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 51265507 - 51265453
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  51265507 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 51265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 24006147 - 24006098
Alignment:
Q  385 tgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||||||||||||||||| |||  ||||||||||  ||||||||    
T  24006147 tgtttctctctctttcacaagcattgtgtcattgtgattggccaatgtca 24006098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 54716349 - 54716386
Alignment:
Q  315 ggtagtatttgtgtgacatagagtttggtgacattgat 352  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  54716349 ggtagtatttgagtgacatagagttgggtgacattgat 54716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 31532809 - 31532717
Alignment:
Q  342 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||| | |||||||||||||| |||| ||  ||||  |||| ||||||||||||| |||   || |||| ||||||||||| ||||||||    
T  31532809 gtgacataggtgacattgaccaatcacaacgtcacaatgtttgtatttctctctcttttacatatattgtgacattgtgattgaacaatgtca 31532717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 11016872 - 11016999
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||| |||||||||| |    
T  11016872 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggt 11016971  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||||||||||||||    
T  11016972 caatgtcaccaatgtcacccaactctat 11016999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 38975808 - 38975935
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| | ||||||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  ||| | ||||||    
T  38975808 gtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattataattgat 38975907  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||||||||| ||||||||    
T  38975908 caatgtcaccaatgtcacctaactctat 38975935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 41018363 - 41018256
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || ||||||||||      
T  41018363 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggc 41018264  T
Q  427 caatgtca 434  Q
    ||||||||    
T  41018263 caatgtca 41018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 15027548 - 15027661
Alignment:
Q  330 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaa 429  Q
    ||||||||||   |||||||| |||||||||||||| |||||    ||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  15027548 acatagagttgtttgacattggtgacattgaccaatcacaataccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaa 15027647  T
Q  430 tgtcatcaatgtca 443  Q
    ||||| ||||||||    
T  15027648 tgtcaccaatgtca 15027661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 450
Target Start/End: Original strand, 4290548 - 4290671
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| ||||| |||| ||| ||||  |||| ||||||   |||| || |||||||||||||||||||||| || |||| ||||||||||      
T  4290548 gtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgctcgtgtttctctctctttcacaagaattgtgacattgtgattggc 4290647  T
Q  427 caatgtcatcaatgtcacccaact 450  Q
    |||||||| |||||||||||||||    
T  4290648 caatgtcaccaatgtcacccaact 4290671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 42628323 - 42628425
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || ||||||||||  |||| ||| ||||||||||||||||    
T  42628323 tgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactc 42628422  T
Q  452 tat 454  Q
    |||    
T  42628423 tat 42628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 45231985 - 45231908
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 404  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||| ||||||||||||||||||||    
T  45231985 gtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgcttttgtttctctctctttcacaa 45231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 48000769 - 48000705
Alignment:
Q  387 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||    
T  48000769 tttctctctctttcacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactc 48000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 48000795 - 48000867
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||||||||||||||||  ||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  48000795 ttgtgtttctctctctttcacagacattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48000867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 34854830 - 34854723
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| ||||||||  |||| ||||||   ||||  |||||||||| |||||||||||||||| |||  ||||||||||      
T  34854830 gtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtgtttctatctctttcacaagcattgtggcattgtgattggc 34854731  T
Q  427 caatgtca 434  Q
    ||||||||    
T  34854730 caatgtca 34854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 408
Target Start/End: Complemental strand, 30217594 - 30217508
Alignment:
Q  321 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 408  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |   |||  || ||||||||||||||||||||||||    
T  30217594 atttgtgtgacatagagtttg-tgacattgatgacattcgccaatcacaatatcaaaatgtttatgtttctctctctttcacaagcat 30217508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 4649348 - 4649432
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctc--tctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||  |||| |||||| | |||| ||||||||||||  |||||||||||||||| |||| ||||||||||| ||||||||    
T  4649348 tgacattggtcaatcacaatgctacaatgcttgtgtttctctctctctttcacaagcatcgtgacattgtgattgaccaatgtca 4649432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 424
Target Start/End: Complemental strand, 27028928 - 27028831
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 424  Q
    |||||||||| || |||||  ||| ||||||||  |||| |||||||  ||||  |||||||||||||||||||| |||||| |||| ||||||||||    
T  27028928 gtgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtgtttctctctctttcagaagcattgtgacattgtgattg 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 6225600 - 6225542
Alignment:
Q  387 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacc 445  Q
    ||||||||||||||| ||| |  |||| |||||||||||| ||||||||||||||||||    
T  6225600 tttctctctctttcataaggaccgtgacattgtgattgattaatgtcatcaatgtcacc 6225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 422
Target Start/End: Original strand, 10419486 - 10419556
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||  |||| | |||||| ||||||||||||||||||||||||||||||  | |||| ||||||||    
T  10419486 tgacattggtcaatcataatgttacaatacttgtgtttctctctctttcacaagttttgtgacattgtgat 10419556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 11017004 - 11016958
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||    
T  11017004 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgt 11016958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 22764820 - 22764754
Alignment:
Q  342 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 408  Q
    ||||||||| ||| |||| ||||| |||||||  ||||  |||||||||||||||||||||||||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcat 22764754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 7672021 - 7671949
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 424  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||    
T  7672021 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattg 7671949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 454
Target Start/End: Original strand, 34854786 - 34854825
Alignment:
Q  415 attgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  34854786 attgtgattgaccaatgtcaccaatgtcacccaactctat 34854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 454
Target Start/End: Original strand, 41018319 - 41018358
Alignment:
Q  415 attgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  41018319 attgtgattggtcaatgtcaccaatgtcacccaactctat 41018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 41084251 - 41084208
Alignment:
Q  391 tctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||||||||| || |||||||| ||||||||||||||||    
T  41084251 tctctctttcacaaggattgtgatattatgattgatcaatgtca 41084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 42628430 - 42628371
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||| ||||| ||||||    
T  42628430 gtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtg 42628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 11016931 - 11016877
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  11016931 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 11016877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 29053424 - 29053342
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| | |  ||||||||||  ||||||||    
T  29053424 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgaggcattgtgattggccaatgtca 29053342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 38975867 - 38975813
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||  ||||||||||| |||||| | |||||||||||||||||||    
T  38975867 cacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctat 38975813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 372
Target Start/End: Complemental strand, 48000869 - 48000827
Alignment:
Q  330 acatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    |||||||||| |||||||||| |||||||||||||| ||||||    
T  48000869 acatagagttgggtgacattggtgacattgaccaatcacaatg 48000827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 38975940 - 38975895
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    ||||||||||||| |||||||||| ||||||||| |||||| ||||    
T  38975940 gtgacatagagttaggtgacattggtgacattgatcaattataatg 38975895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 30734537 - 30734410
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  30734537 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 30734438  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    ||||||||||||||||||| ||||||||    
T  30734437 caatgtcatcaatgtcaccaaactctat 30734410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 33689175 - 33689286
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||||||||||| |||||||||||||| ||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  33689175 ttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 33689274  T
Q  423 tgatcaatgtca 434  Q
    ||  ||||||||    
T  33689275 tggccaatgtca 33689286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 327 - 448
Target Start/End: Complemental strand, 47492182 - 47492061
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| | | |||| ||||| |||||||  |||| ||||||||||||||| |||||||||||| |||| ||||||||||      
T  47492182 gtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtgtttctctctttttcacaagcattgtgacattgtgattggc 47492083  T
Q  427 caatgtcatcaatgtcacccaa 448  Q
    |||||||| |||||||||||||    
T  47492082 caatgtcaccaatgtcacccaa 47492061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 327 - 460
Target Start/End: Complemental strand, 51046208 - 51046075
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| | |||||||| |||||||| ||||| ||||||    ||| |||||||||||||||||||||||| ||| |||| ||| ||||||||    
T  51046208 gtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtgtttctctctctttcacaaacattgtgacattatgattgat 51046109  T
Q  427 caatgtcatcaatgtcacccaactctatatcatc 460  Q
    |||||||| |||| ||| |||||||||| |||||    
T  51046108 caatgtcaccaatatcatccaactctatgtcatc 51046075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 41752967 - 41753094
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  |||||||||| |||||||||||||||| |||  ||||||||||      
T  41752967 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctttctctttcacaagcattgtggcattgtgattggc 41753066  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| ||||||||| |||||||||    
T  41753067 caatgtcaccaatgtcactcaactctat 41753094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 43139851 - 43139737
Alignment:
Q  320 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 419  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||  ||| |||||    
T  43139851 tatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtgtttctctctctttcacaagcattctgacattgt 43139752  T
Q  420 gattgatcaatgtca 434  Q
    |||||| | ||||||    
T  43139751 gattgaccgatgtca 43139737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 454
Target Start/End: Original strand, 50524706 - 50524832
Alignment:
Q  328 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 427  Q
    ||||||||||||  |||| | ||||||||||||||||| | |||||  ||||  ||||||||||||||||||||||||||| || | |||||||||||      
T  50524706 tgacatagagttgagtgataatgatgacattgaccaatcataatgtcacaatgtttgtgtttctctctctttcacaagcatcgtaacattgtgattgact 50524805  T
Q  428 aatgtcatcaatgtcacccaactctat 454  Q
    ||| ||| ||||||||| |||||||||    
T  50524806 aatatcaccaatgtcactcaactctat 50524832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 55223231 - 55223338
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||| ||||| ||  ||||||| |||||||||||||||||||||||| |||| ||| ||||    
T  55223231 ttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaatattagaatacttatgtttctctctctttcacaagcattgtgacattatgat 55223330  T
Q  423 tgatcaat 430  Q
    ||| ||||    
T  55223331 tgaccaat 55223338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Complemental strand, 1801556 - 1801454
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||||||||||||||    
T  1801556 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 1801457  T
Q  452 tat 454  Q
    |||    
T  1801456 tat 1801454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 50549992 - 50550085
Alignment:
Q  341 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||| |||| |||||||||||||| ||||| || |||| |||||||||||||||||||||||| |||  ||| ||| ||||||||||||||||    
T  50549992 ggtgatattggtgacattgaccaatcacaatattacaatgcttgtgtttctctctctttcacaaacattatgacattatgattgatcaatgtca 50550085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 45103180 - 45103117
Alignment:
Q  391 tctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||    
T  45103180 tctctctttcacaagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctat 45103117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 30734401 - 30734464
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||  |||| ||||||    
T  30734401 ttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtg 30734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 30476584 - 30476502
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  30476584 tgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 30476502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 454
Target Start/End: Complemental strand, 30580890 - 30580764
Alignment:
Q  328 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 427  Q
    ||||||||| || |||||||||  ||||||||  |||| |||||||  || | ||||||||||| ||||||||||||  || |||| ||| |||||| ||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtgtttctatctctttcacaaatattgtgacattatgattggtc 30580791  T
Q  428 aatgtcatcaatgtcacccaactctat 454  Q
    ||| ||| ||||||||||||| |||||    
T  30580790 aatatcaccaatgtcacccaattctat 30580764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 47677365 - 47677283
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||| |||| |||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||| | |||||||||    
T  47677365 tgacattgatcaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgatcggtcaatgtca 47677283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 430
Target Start/End: Complemental strand, 29031814 - 29031746
Alignment:
Q  362 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 430  Q
    ||||||||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  29031814 caattacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaat 29031746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 30904296 - 30904368
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 448  Q
    |||| ||||||||||||||||||| | ||  || ||||||||||||||||| ||||||||| |||||||||||    
T  30904296 caatgcttgtgtttctctctcttttataaatattgtgatattgtgattgattaatgtcatcgatgtcacccaa 30904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 18321657 - 18321763
Alignment:
Q  330 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaa 429  Q
    |||||||||| ||||| |||| ||||||||  |||| |||||||  |||   |||||||| ||||| ||||||| |||| |||| ||||||||||| |||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatgtcacaaagtttgtgtttttctctttttcacatgcattgtgacattgtgattgaccaa 18321756  T
Q  430 tgtcatc 436  Q
    |||||||    
T  18321757 tgtcatc 18321763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 33689238 - 33689184
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||    
T  33689238 cacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactctat 33689184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 39385798 - 39385746
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 404  Q
    |||||||| ||||| |||||||| ||||| |||| ||||||||||||||||||    
T  39385798 tgacattggccaatcacaatgttacaatatttgtatttctctctctttcacaa 39385746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 50550037 - 50549970
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca-tcaagtat 466  Q
    ||||||||| || |||||||||||| ||||||||| |||| ||||||| || ||||||| ||||||||    
T  50550037 cacaagcattgtaatattgtgattggtcaatgtcaccaatatcacccagctttatatcactcaagtat 50549970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 1801449 - 1801494
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  1801449 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 1801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 454
Target Start/End: Complemental strand, 18321703 - 18321659
Alignment:
Q  410 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| ||||||||||| |||||||| |||| ||||||||||||||    
T  18321703 gtgacattgtgattgaccaatgtcaccaatatcacccaactctat 18321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 30580832 - 30580892
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 460  Q
    ||||||||  |||| ||||||||||| ||||||||  |||||||||||| ||||| |||||    
T  30580832 cacaagcactgtgacattgtgattgaccaatgtcacaaatgtcacccaattctatgtcatc 30580892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 351
Target Start/End: Original strand, 47677263 - 47677291
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattga 351  Q
    |||||||||||||||||||||||||||||    
T  47677263 ttgtgtgacatagagtttggtgacattga 47677291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 323 - 454
Target Start/End: Complemental strand, 7185 - 7055
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  7185 ttgtgtgacatagagtt-ggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 7087  T
Q  423 tgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||   ||| ||| |||||||||||||||||||    
T  7086 tggctaatatcaccaatgtcacccaactctat 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 16514427 - 16514554
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    ||||||||||||| |||||||||| |||||||| ||||| || |||    ||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  16514427 gtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 16514526  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||||||| |||| ||||||||||||||    
T  16514527 caatgtcaccaatctcacccaactctat 16514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 29508826 - 29508698
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgata-ttgtgattga 425  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  | |||||||||     
T  29508826 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcattgtggcatttgtgattgg 29508727  T
Q  426 tcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||||||||||||||||||    
T  29508726 tcaatgtcaccaatgtcacccaactctat 29508698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 14229453 - 14229361
Alignment:
Q  362 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||| ||||||||    
T  14229453 caatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaatgtcaccaatgtcaccgaactctat 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 38933615 - 38933717
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||| ||||||  ||| |||| ||||||||||||||||    
T  38933615 tgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggccaacgtcaccaatgtcacccaactc 38933714  T
Q  452 tat 454  Q
    |||    
T  38933715 tat 38933717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 6721970 - 6722081
Alignment:
Q  343 tgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtc 442  Q
    |||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||||||||| ||| |||| ||||||||||  |||| |||  ||||||    
T  6721970 tgacattggtgacattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggccaatatcactaatgtc 6722069  T
Q  443 acccaactctat 454  Q
    | ||||||||||    
T  6722070 aaccaactctat 6722081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Complemental strand, 6217334 - 6217232
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||||||||||||||    
T  6217334 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 6217235  T
Q  452 tat 454  Q
    |||    
T  6217234 tat 6217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 454
Target Start/End: Complemental strand, 14470693 - 14470600
Alignment:
Q  361 ccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||| |||||||  ||||  ||||||||||||||||||||||||||| |  | |||||||||| ||||||||| |||||||||||||||||||    
T  14470693 ccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctat 14470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 437
Target Start/End: Original strand, 8534164 - 8534259
Alignment:
Q  342 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatca 437  Q
    ||||||||||||||||||| ||||||||||||   |||| |||||||||||||| ||||||||| || |||| ||||| ||||| |||| ||||||    
T  8534164 gtgacattgatgacattgatcaattacaatgtaaaaatatttgtgtttctctctatttcacaagaattgtgacattgtaattgaccaatatcatca 8534259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 454
Target Start/End: Original strand, 24115919 - 24116050
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    |||||||| ||||||||  || |||||| | |||||| ||||| |||||||| |||| | |||||||| | ||||||||||||||| | || ||||||||    
T  24115919 ttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcctgtgtttcacactctttcacaagcattgcgacattgtgat 24116018  T
Q  423 tgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||| |||| |||  |||| |||||||||||||    
T  24116019 tgaccaatatcactaatggcacccaactctat 24116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 14470591 - 14470654
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||| ||||||    
T  14470591 ttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtg 14470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 15011297 - 15011390
Alignment:
Q  341 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||||| ||| |||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  15011297 ggtgacattggtgatattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 15011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 2893991 - 2894075
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 436  Q
    |||||||| ||||| ||||| |  |||| ||||| |||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  2893991 tgacattggccaatcacaatctcacaatgcttgtatttctctctctttcacaagcattgtgacactgtgattgaccaatgtcatc 2894075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 14892318 - 14892390
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| ||||||||||||||| ||| || || | |||||||||||||||||||| |||||||| ||||||||||    
T  14892318 ttgtctttctctctctttcataagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctat 14892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 37961764 - 37961836
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||||||  ||| |||| |||||||||    
T  37961764 ttgtgtttctctctctttcacaagcattgtggcattgtgattggtcaatgtcacaaatatcactcaactctat 37961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 45213939 - 45213892
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaa 370  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  45213939 ttgtgtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 2828612 - 2828694
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||| ||||| |||||||   ||| ||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||    
T  2828612 tgacattggccaatcacaatgtcaaaatgcttgtgtttctctctctttcagaagcattgtgacattgtgattggccaatgtca 2828694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 383
Target Start/End: Complemental strand, 14892407 - 14892339
Alignment:
Q  315 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 383  Q
    ||||| ||||| ||||||||||||| | |||||||| ||||||||| |||| |||||||| ||||||||    
T  14892407 ggtagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatactt 14892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 452
Target Start/End: Complemental strand, 29925680 - 29925580
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  ||| |||||||  |  |||||||| |||| |||||||||||    
T  29925680 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattctgacattgtgaggggccaatgtcaccaatatcacccaactc 29925581  T
Q  452 t 452  Q
    |    
T  29925580 t 29925580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 459
Target Start/End: Original strand, 33018620 - 33018680
Alignment:
Q  399 tcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcat 459  Q
    |||||||||| |||| ||||||||||| |||| ||| ||||||||||||||||||| ||||    
T  33018620 tcacaagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtcat 33018680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 434
Target Start/End: Complemental strand, 37762128 - 37762029
Alignment:
Q  335 gagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||| |||| |||| |||||| |  |||| ||||| |  |||| ||||||||||| |||||||||||||||| | || |||||||||| |||||||||    
T  37762128 gagtttagtgatattggtgacatgggtcaatcacaatatcacaatgcttgtgtttctttctctttcacaagcattgcgacattgtgattggtcaatgtca 37762029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 454
Target Start/End: Original strand, 45213892 - 45213930
Alignment:
Q  416 ttgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  45213892 ttgtgattggtcaatgtcatcaatgtcacccaactctat 45213930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 6722013 - 6721965
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 448  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||||    
T  6722013 cacaagcattgtgatattgtgattggtcaatgtcaccaatgtcatccaa 6721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 16514559 - 16514500
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||||  |||| ||||||    
T  16514559 gtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtg 16514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 29508693 - 29508736
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaa 370  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||    
T  29508693 gtgacatagagttgggtgacattggtgacattgaccaatcacaa 29508736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 6217227 - 6217272
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 372  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  6217227 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 6217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 9173116 - 9173035
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 408  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||||| ||||||| ||||| | ||||||    
T  9173116 gtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgtatttctctttcttttataagcat 9173035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 454
Target Start/End: Complemental strand, 49813 - 49711
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||||||| ||||| ||||||   |||| ||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  49813 tgacattggccaatcacaatgccacaatgcttgtgtttctctttctttcacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactc 49714  T
Q  452 tat 454  Q
    |||    
T  49713 tat 49711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 49706 - 49765
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||  |||| ||||||    
T  49706 gtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtg 49765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 454
Target Start/End: Complemental strand, 24618711 - 24618609
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 451  Q
    |||| ||||||||| |||||||  |||| ||||||||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||||||||    
T  24618711 tgacgttgaccaatcacaatgtcacaatgcttgtgtttctctctctttcataagcattatgacattgtgattgatcaatgtcaccaatgtcacccaactc 24618612  T
Q  452 tat 454  Q
    |||    
T  24618611 tat 24618609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 454
Target Start/End: Original strand, 17750902 - 17751032
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 422  Q
    ||||||||||||||||| | |||||||| ||||||||  |||| |||||||  ||||  |||| ||| |||||||||||||||||| |||| ||||||||    
T  17750902 ttgtgtgacatagagtt-gatgacattggtgacattggtcaatcacaatgtcacaatgtttgtatttatctctctttcacaagcattgtgacattgtgat 17751000  T
Q  423 tgatcaatgtcatcaatgtcacccaactctat 454  Q
     |  ||||||||||||| ||||||||||||||    
T  17751001 cggccaatgtcatcaatatcacccaactctat 17751032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 12343152 - 12343230
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| |||| ||||||||||||||    
T  12343152 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatctcacccaactctat 12343230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 551307 - 551193
Alignment:
Q  320 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 419  Q
    |||||| |||||||||| || | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||  |||||    
T  551307 tatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtggcattgt 551208  T
Q  420 gattgatcaatgtca 434  Q
    |||||| ||||||||    
T  551207 gattgaccaatgtca 551193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 13043509 - 13043587
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||   |||||||| |||| |||| |||||||||    
T  13043509 caatgcttgtgtttctctctctttcacaagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctat 13043587  T

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Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 24587464 - 24587558
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga 421  Q
    ||||||||||||| |||||||||  ||||||||  |||| |||||||  |||| |||||||||||| || |||||||||||| |||| |||||||    
T  24587464 gtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtgtttctcgctttttcacaagcattgtgacattgtga 24587558  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 10521959 - 10521877
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    ||||||||  |||| |||||||   ||| ||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||    
T  10521959 tgacattggtcaatcacaatgtcataatgcttgtgtttctctctctttcataagcattgtgacattgtgattggccaatgtca 10521877  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 24587523 - 24587469
Alignment:
Q  400 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    ||||||||| |||| ||||||||||| ||||||||  ||||||||||||||||||    
T  24587523 cacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctat 24587469  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 2315381 - 2315332
Alignment:
Q  385 tgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||| ||||||||||||| ||| |||| ||||||||||||||||||||    
T  2315381 tgtttcgctctctttcacaaacattgtgacattgtgattgatcaatgtca 2315332  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 31654333 - 31654390
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatg 409  Q
    |||||||| ||||| |||||||  |||| |||||||||||||||||||||||| ||||    
T  31654333 tgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaaacatg 31654390  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 17751041 - 17750978
Alignment:
Q  323 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||||||| ||||| ||||||||||||| || || |||||||  |||| ||||||    
T  17751041 ttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtg 17750978  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 454
Target Start/End: Complemental strand, 24975815 - 24975760
Alignment:
Q  399 tcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||||||||| |||  ||||||||||| |||||||| |||||||| ||||||||||    
T  24975815 tcacaagcattgtggcattgtgattgaccaatgtcaccaatgtcagccaactctat 24975760  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1094535 - 1094573
Alignment:
Q  1 actcgaggtctgaacacgatggagcttcactaacaatgc 39  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  1094535 actcgaggcctgaacacgatggagcttcacaaacaatgc 1094573  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 24618604 - 24618650
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 373  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||    
T  24618604 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgt 24618650  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 458
Target Start/End: Complemental strand, 7384552 - 7384492
Alignment:
Q  398 ttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca 458  Q
    ||||||| |||  ||| |||||||||| |||||||||  ||||||| ||||||||||||||    
T  7384552 ttcacaaacattatgacattgtgattggtcaatgtcactaatgtcatccaactctatatca 7384492  T

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Target: scaffold0180 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 454
Target Start/End: Complemental strand, 19202 - 19130
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 454  Q
    |||||||||||| |||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  19202 ttgtgtttctctttcttccacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctat 19130  T

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Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 19119 - 19184
Alignment:
Q  321 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 386  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||| |||||||  |||| ||||||    
T  19119 atttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtg 19184  T

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Target: scaffold0161 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 27355 - 27228
Alignment:
Q  327 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 426  Q
    |||| |||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||| ||||||||||||||||||||| ||  ||| ||||||||||      
T  27355 gtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttctgtttctctctctttcacaagaattatgacattgtgattggc 27256  T
Q  427 caatgtcatcaatgtcacccaactctat 454  Q
    |||| |||  ||||||||||||||||||    
T  27255 caatatcactaatgtcacccaactctat 27228  T

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Target: scaffold1033 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtc 433  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1029 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  376 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtc 433  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 445
Target Start/End: Complemental strand, 5010 - 4909
Alignment:
Q  341 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 440  Q
    ||||| |||| ||| ||||  ||||||||||||| ||   ||| ||||| |||||||||||||||||| || |||||||||||| || |||||| |||||    
T  5010 ggtgatattggtgatattggtcaattacaatgttaca---cttatgtttgtctctctttcacaagcattgtaatattgtgattggtcgatgtcaccaatg 4914  T
Q  441 tcacc 445  Q
    |||||    
T  4913 tcacc 4909  T

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Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 63785 - 63867
Alignment:
Q  352 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 434  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  63785 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 63867  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 2967 - 2919
Alignment:
Q  382 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 430  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| |||||    
T  2967 ttgtgtttctctctctttcacaaacattgtgacattgtgattggtcaat 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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