View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18315_high_59 (Length: 305)
Name: NF18315_high_59
Description: NF18315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18315_high_59 |
 | |
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| [»] chr2 (2 HSPs) |
| |
|
| [»] chr1 (6 HSPs) |
| |
|
| [»] chr6 (2 HSPs) |
| |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 6 - 305
Target Start/End: Complemental strand, 38253529 - 38253230
Alignment:
| Q |
6 |
gaggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253529 |
gaggagaagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
38253430 |
T |
|
| Q |
106 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253429 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
38253330 |
T |
|
| Q |
206 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253329 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
38253230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 6 - 305
Target Start/End: Original strand, 43156013 - 43156312
Alignment:
| Q |
6 |
gaggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
43156013 |
gaggagaagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
43156112 |
T |
|
| Q |
106 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43156113 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
43156212 |
T |
|
| Q |
206 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43156213 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttaatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
43156312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 6 - 305
Target Start/End: Original strand, 11473337 - 11473636
Alignment:
| Q |
6 |
gaggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473337 |
gaggagaagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
11473436 |
T |
|
| Q |
106 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473437 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
11473536 |
T |
|
| Q |
206 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473537 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
11473636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 6 - 305
Target Start/End: Complemental strand, 28246721 - 28246400
Alignment:
| Q |
6 |
gaggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
105 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28246721 |
gaggagaagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaatccaaatgggaa |
28246622 |
T |
|
| Q |
106 |
aaacatacacacacac----------------------tgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagac |
183 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28246621 |
aaacatacacacacacacacacacacacacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagac |
28246522 |
T |
|
| Q |
184 |
atgaatctgactctctttgtgaatatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtag |
283 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28246521 |
atgaatctgactctctttgtgaatatgtcatcacaaaggcaaaacatgaaggatcttgaagagtttcatttaaccgtgtttcaaattccatcacttgtag |
28246422 |
T |
|
| Q |
284 |
ttgtaggaaatttgatactttt |
305 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
28246421 |
ttgtaggaaatttgatactttt |
28246400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 10465961 - 10465668
Alignment:
| Q |
8 |
ggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaaaa |
107 |
Q |
| |
|
|||| |||||| ||||||| ||| |||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
10465961 |
ggagaagagagaaaaagaactgaaatgtgattatgagtcctcacataagcttgcaaggttagtgtatgaaacttcaccattactaatccaaatgggaaag |
10465862 |
T |
|
| Q |
108 |
acatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtgaat |
207 |
Q |
| |
|
| ||||||||||||| ||||||| ||||||||| | ||||||||||||||||| |||| ||| |||| |||||||||||| |||||||||| ||||||| |
|
|
| T |
10465861 |
atatacacacacactatatttgagttgtttcaaaacgagtttaagttattcttggctttgtctatacctattagacatgaaactgactctctatgtgaat |
10465762 |
T |
|
| Q |
208 |
atgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatac |
301 |
Q |
| |
|
||||||| || || | |||||||||||||||| ||||| |||||||| |||||||||| |||||| ||||||||||||| ||| | |||||| |
|
|
| T |
10465761 |
atgtcattactaatacgaaacatgaaggatcttttagagtgtcatttaatcgtgtttcaacttccattacttgtagttgtaagaagtatgatac |
10465668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 43735613 - 43735320
Alignment:
| Q |
8 |
ggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaaaa |
107 |
Q |
| |
|
|||| |||||| ||||||| ||| |||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
43735613 |
ggagaagagagaaaaagaactgaaatgtgattatgagtcctcacataagcttgcaaggttagtgtatgaaacttcaccattactaatccaaatgggaaag |
43735514 |
T |
|
| Q |
108 |
acatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtgaat |
207 |
Q |
| |
|
| ||||||||||||| ||||||| ||||||||| | ||||||||||||||||| |||| ||| |||| |||||||||||| |||||||||| ||||||| |
|
|
| T |
43735513 |
atatacacacacactatatttgagttgtttcaaaacgagtttaagttattcttggctttgtctatacctattagacatgaaactgactctctatgtgaat |
43735414 |
T |
|
| Q |
208 |
atgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatac |
301 |
Q |
| |
|
||||||| || || | |||||||||||||||| ||||| |||||||| |||||||||| |||||| ||||||||||||| ||| | |||||| |
|
|
| T |
43735413 |
atgtcattactaatacgaaacatgaaggatcttttagagtgtcatttaatcgtgtttcaacttccattacttgtagttgtaagaagtatgatac |
43735320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 112 - 301
Target Start/End: Complemental strand, 7282439 - 7282250
Alignment:
| Q |
112 |
acacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtgaatatgt |
211 |
Q |
| |
|
||||||||||| ||||||| ||||||||| | ||||||||||||||||| |||| |||||||| |||||||||||| |||||||||| ||||||||||| |
|
|
| T |
7282439 |
acacacacactatatttgagttgtttcaaaacgagtttaagttattcttggctttgtctgtacctattagacatgaaactgactctctatgtgaatatgt |
7282340 |
T |
|
| Q |
212 |
catcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatac |
301 |
Q |
| |
|
|||||| || | |||||||||||||||| ||||| |||||||| |||||||||| |||||| ||||||||||||| ||| | |||||| |
|
|
| T |
7282339 |
catcactaatacgaaacatgaaggatcttttagagtgtcatttaatcgtgtttcaacttccattacttgtagttgtaagaagtatgatac |
7282250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 7282563 - 7282465
Alignment:
| Q |
8 |
ggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaaa |
106 |
Q |
| |
|
|||| |||||| ||||||| ||| |||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
7282563 |
ggagaagagagaaaaagaactgaaatgtgattatgagtcctcacataagcttgcaaggttagtgtatgaaacttcaccattactaatccaaatgggaaa |
7282465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 6 - 305
Target Start/End: Complemental strand, 10124718 - 10124420
Alignment:
| Q |
6 |
gaggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10124718 |
gaggagaagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggatagcatatgaaactgcaccaatactaatccaaatgggaa |
10124619 |
T |
|
| Q |
106 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10124618 |
aaacatacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtga |
10124519 |
T |
|
| Q |
206 |
atatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
305 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10124518 |
atat-tcatcacaaaggcaaaacatgaatgatcttggagagtttcatttaactgtgtttcaaattccatcacttgtagttgtaggaaatttgatactttt |
10124420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 305
Target Start/End: Complemental strand, 19308397 - 19308092
Alignment:
| Q |
16 |
gagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaaaaacatacac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19308397 |
gagcaaaagaattgagttgtgtgtatgaatcctcacataagcttgcaaggttagcatatgaaactgcaccaatactaatccaaatgggaaaaacatacac |
19308298 |
T |
|
| Q |
116 |
acacac----------------tgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctct |
199 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19308297 |
acacacacacacacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatttgactctct |
19308198 |
T |
|
| Q |
200 |
ttgtgaatatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgat |
299 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19308197 |
ttgtgattatgtcatcactaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgat |
19308098 |
T |
|
| Q |
300 |
actttt |
305 |
Q |
| |
|
|||||| |
|
|
| T |
19308097 |
actttt |
19308092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 6 - 305
Target Start/End: Original strand, 25381448 - 25381749
Alignment:
| Q |
6 |
gaggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaa |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
25381448 |
gaggagaagagagcaaaagaattgagttgtgtgtatgaatcctcacataagcttgcaaggttagcatatgaaactgcaccaatactaatccaaatgggaa |
25381547 |
T |
|
| Q |
106 |
aaacatacac--acacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgt |
203 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
25381548 |
aaacatacacacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatatgtaccagttagacatgaatctgactctctttgt |
25381647 |
T |
|
| Q |
204 |
gaatatgtcatcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatactt |
303 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
25381648 |
gaatatgtcatcactaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtagaaaatttgatactt |
25381747 |
T |
|
| Q |
304 |
tt |
305 |
Q |
| |
|
|| |
|
|
| T |
25381748 |
tt |
25381749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 39 - 301
Target Start/End: Original strand, 25862078 - 25862338
Alignment:
| Q |
39 |
tatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaaaaacatacacacacactgtatttgaattgtttc |
138 |
Q |
| |
|
||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| ||||||| ||||||| |
|
|
| T |
25862078 |
tatgagtcctcacataagcttgcaaggttagtgtatgaaacttcaccattactaatccaaatgggaaagatatacacacatactatatttgagttgtttc |
25862177 |
T |
|
| Q |
139 |
aagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtgaatatgtcatcacaaaggcaaaacatgaaggatc |
238 |
Q |
| |
|
|| | ||| |||||||||||| |||| |||||||| |||||||||||| |||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
25862178 |
aaaacgag--taagttattcttggctttgtctgtacctattagacatgaaactgactctctatgtgaatatgtcatcactaataagaaacatgaaggatc |
25862275 |
T |
|
| Q |
239 |
ttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgtaggaaatttgatac |
301 |
Q |
| |
|
|| ||||| |||||||| |||||||||| |||||| ||||||||||||| ||| | |||||| |
|
|
| T |
25862276 |
ttttagagtgtcatttaatcgtgtttcaacttccattacttgtagttgtaagaagtatgatac |
25862338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 288
Target Start/End: Original strand, 5910711 - 5910887
Alignment:
| Q |
112 |
acacacacactgtatttgaattgtttcaagatgagtttaagttattcttaactttatctgtaccaattagacatgaatctgactctctttgtgaatatgt |
211 |
Q |
| |
|
||||||||||| ||||||| ||||||||| | ||||||||||||||||| |||| |||||||| |||||||||||| |||||||||| ||||||||||| |
|
|
| T |
5910711 |
acacacacactatatttgagttgtttcaaaacgagtttaagttattcttggctttgtctgtacccattagacatgaaactgactctctatgtgaatatgt |
5910810 |
T |
|
| Q |
212 |
catcacaaaggcaaaacatgaaggatcttggagagtttcatttaaccgtgtttcaaattccatcacttgtagttgta |
288 |
Q |
| |
|
|||||| || |||||||||||||||| ||||| |||||||| |||||||||| ||| || ||||||||||||| |
|
|
| T |
5910811 |
catcactaataagaaacatgaaggatcttttagagtgtcatttaatcgtgtttcaacttcaattacttgtagttgta |
5910887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 5910575 - 5910688
Alignment:
| Q |
8 |
ggagcagagagcaaaagaattgagttgtgtgtatgaatcctcccataagcttgcaaggttagcatatgaaactgcaccaatactaattcaaatgggaaaa |
107 |
Q |
| |
|
|||| |||||| ||||||| ||| |||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
5910575 |
ggagaagagagaaaaagaactgaaatgtgattatgagtcctcacataagcttgcaaggttagtgtatgaaacttcaccattactaatccaaatgggaaag |
5910674 |
T |
|
| Q |
108 |
acatacacacacac |
121 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
5910675 |
atatacacacacac |
5910688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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