View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18315_low_11 (Length: 638)

Name: NF18315_low_11
Description: NF18315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18315_low_11
NF18315_low_11
[»] chr1 (58 HSPs)
chr1 (324-608)||(52832345-52832626)
chr1 (8-294)||(52832026-52832312)
chr1 (67-266)||(52561632-52561831)
chr1 (17-266)||(9509308-9509557)
chr1 (16-262)||(39140509-39140750)
chr1 (17-266)||(9599437-9599686)
chr1 (17-260)||(18469131-18469374)
chr1 (67-266)||(32404569-32404768)
chr1 (17-266)||(1210735-1210984)
chr1 (17-266)||(4001498-4001747)
chr1 (41-206)||(48431509-48431674)
chr1 (8-270)||(8671899-8672161)
chr1 (17-266)||(34792392-34792641)
chr1 (117-266)||(39318219-39318368)
chr1 (17-245)||(696259-696487)
chr1 (67-266)||(25979274-25979473)
chr1 (8-266)||(51602037-51602295)
chr1 (17-266)||(22090086-22090335)
chr1 (117-266)||(37311798-37311947)
chr1 (8-266)||(37462919-37463174)
chr1 (17-266)||(49347436-49347685)
chr1 (72-229)||(34827183-34827341)
chr1 (17-190)||(2544589-2544761)
chr1 (17-266)||(30202173-30202422)
chr1 (17-266)||(38807714-38807963)
chr1 (164-264)||(29128920-29129020)
chr1 (164-267)||(11331246-11331349)
chr1 (164-267)||(11489267-11489370)
chr1 (17-196)||(43240492-43240671)
chr1 (17-167)||(27847947-27848097)
chr1 (17-175)||(36624006-36624158)
chr1 (152-266)||(41560354-41560468)
chr1 (17-266)||(8391762-8392011)
chr1 (169-274)||(16142015-16142120)
chr1 (170-271)||(27520245-27520346)
chr1 (17-266)||(32230997-32231246)
chr1 (17-177)||(15085924-15086084)
chr1 (17-208)||(9592724-9592915)
chr1 (156-266)||(3818899-3819009)
chr1 (164-262)||(7762484-7762582)
chr1 (117-252)||(9002442-9002577)
chr1 (69-192)||(50771673-50771795)
chr1 (180-266)||(10200349-10200435)
chr1 (152-209)||(8628155-8628212)
chr1 (67-135)||(10569241-10569309)
chr1 (17-177)||(32082877-32083037)
chr1 (179-262)||(52739557-52739641)
chr1 (17-104)||(1661420-1661507)
chr1 (17-196)||(4029112-4029291)
chr1 (155-254)||(8342936-8343035)
chr1 (17-196)||(51440878-51441057)
chr1 (152-266)||(4415474-4415588)
chr1 (156-266)||(6025734-6025844)
chr1 (157-271)||(11941618-11941732)
chr1 (152-218)||(26299210-26299276)
chr1 (152-266)||(52921205-52921319)
chr1 (67-136)||(5338764-5338833)
chr1 (17-141)||(35828718-35828842)
[»] chr7 (49 HSPs)
chr7 (17-262)||(36136754-36136999)
chr7 (17-262)||(7189266-7189518)
chr7 (8-266)||(43281655-43281913)
chr7 (67-266)||(28627976-28628175)
chr7 (18-266)||(2885765-2886013)
chr7 (17-207)||(13859110-13859300)
chr7 (17-266)||(11593950-11594199)
chr7 (67-266)||(43491348-43491547)
chr7 (152-266)||(40979971-40980085)
chr7 (17-266)||(12841318-12841567)
chr7 (147-266)||(9210747-9210866)
chr7 (17-266)||(37617934-37618184)
chr7 (17-266)||(49029266-49029515)
chr7 (17-266)||(29650374-29650623)
chr7 (164-263)||(21517426-21517525)
chr7 (17-208)||(33349907-33350098)
chr7 (17-208)||(44855273-44855464)
chr7 (17-266)||(34869410-34869659)
chr7 (17-266)||(35906244-35906493)
chr7 (17-266)||(46355899-46356148)
chr7 (17-196)||(31005213-31005392)
chr7 (167-266)||(36239839-36239938)
chr7 (17-266)||(39906415-39906662)
chr7 (17-266)||(45836525-45836772)
chr7 (17-266)||(6374858-6375107)
chr7 (117-266)||(7273190-7273339)
chr7 (41-266)||(31682645-31682870)
chr7 (7-92)||(36514424-36514509)
chr7 (17-266)||(47848664-47848912)
chr7 (181-269)||(35922407-35922495)
chr7 (87-250)||(1531420-1531583)
chr7 (8-175)||(33072933-33073100)
chr7 (67-266)||(38135256-38135454)
chr7 (17-266)||(35559036-35559286)
chr7 (87-263)||(1011107-1011282)
chr7 (27-266)||(36869287-36869526)
chr7 (179-266)||(14057630-14057717)
chr7 (179-266)||(14367658-14367745)
chr7 (224-274)||(36101812-36101862)
chr7 (17-177)||(38606994-38607154)
chr7 (17-97)||(48736111-48736191)
chr7 (17-95)||(5335910-5335988)
chr7 (179-229)||(18795839-18795889)
chr7 (152-266)||(24598230-24598344)
chr7 (152-266)||(45601601-45601715)
chr7 (17-134)||(19262609-19262725)
chr7 (41-266)||(36652006-36652231)
chr7 (237-266)||(44401170-44401199)
chr7 (179-266)||(42187593-42187680)
[»] chr3 (34 HSPs)
chr3 (17-266)||(39600724-39600973)
chr3 (67-266)||(48508275-48508474)
chr3 (17-266)||(19676124-19676372)
chr3 (12-271)||(26490300-26490559)
chr3 (17-266)||(54128368-54128618)
chr3 (43-250)||(39235154-39235361)
chr3 (17-172)||(49503691-49503846)
chr3 (17-263)||(22063-22308)
chr3 (17-266)||(35033136-35033385)
chr3 (20-266)||(50960680-50960922)
chr3 (17-266)||(52138790-52139039)
chr3 (17-266)||(45289134-45289385)
chr3 (17-266)||(5168822-5169071)
chr3 (19-248)||(38430840-38431069)
chr3 (17-266)||(28245427-28245676)
chr3 (17-263)||(54279010-54279256)
chr3 (179-266)||(49042088-49042176)
chr3 (17-175)||(19757889-19758047)
chr3 (41-266)||(38850134-38850360)
chr3 (17-140)||(19736986-19737110)
chr3 (41-266)||(48953462-48953690)
chr3 (116-263)||(33755390-33755535)
chr3 (17-96)||(3987037-3987116)
chr3 (17-96)||(11581434-11581513)
chr3 (179-266)||(15296059-15296146)
chr3 (199-266)||(29601064-29601131)
chr3 (223-266)||(39208804-39208847)
chr3 (128-266)||(52678893-52679029)
chr3 (17-175)||(38060421-38060579)
chr3 (8-134)||(48734310-48734436)
chr3 (184-266)||(53519737-53519819)
chr3 (16-96)||(21200539-21200617)
chr3 (17-202)||(27917560-27917745)
chr3 (158-263)||(40116514-40116619)
[»] chr4 (57 HSPs)
chr4 (8-266)||(51421711-51421969)
chr4 (17-266)||(31959857-31960106)
chr4 (117-266)||(26037548-26037697)
chr4 (67-271)||(39708473-39708677)
chr4 (100-263)||(45204886-45205047)
chr4 (17-266)||(4440843-4441092)
chr4 (67-266)||(53518366-53518562)
chr4 (17-266)||(56375280-56375529)
chr4 (17-266)||(436219-436468)
chr4 (17-266)||(33190891-33191140)
chr4 (117-266)||(35690361-35690510)
chr4 (17-266)||(52569558-52569807)
chr4 (18-294)||(20591321-20591591)
chr4 (8-266)||(39100579-39100836)
chr4 (17-266)||(48174136-48174385)
chr4 (19-271)||(53707786-53708038)
chr4 (67-266)||(1777060-1777259)
chr4 (19-208)||(20192025-20192214)
chr4 (17-266)||(33227199-33227448)
chr4 (41-141)||(47611741-47611841)
chr4 (67-266)||(32479078-32479277)
chr4 (17-192)||(35555764-35555939)
chr4 (17-208)||(43433914-43434105)
chr4 (152-266)||(8286564-8286678)
chr4 (19-141)||(10209026-10209148)
chr4 (155-269)||(16003054-16003168)
chr4 (17-266)||(23906340-23906587)
chr4 (8-266)||(27450223-27450480)
chr4 (116-206)||(28351648-28351738)
chr4 (156-270)||(53540419-53540533)
chr4 (72-201)||(1211498-1211627)
chr4 (156-264)||(31043201-31043309)
chr4 (17-97)||(41192826-41192906)
chr4 (8-208)||(48622644-48622844)
chr4 (117-208)||(50679594-50679685)
chr4 (17-96)||(54470197-54470276)
chr4 (179-288)||(40420235-40420342)
chr4 (152-218)||(55809081-55809147)
chr4 (145-266)||(36198934-36199054)
chr4 (41-141)||(20601814-20601914)
chr4 (33-97)||(42285912-42285976)
chr4 (155-266)||(21528416-21528527)
chr4 (8-135)||(25257755-25257882)
chr4 (67-250)||(42639079-42639262)
chr4 (17-96)||(44360077-44360155)
chr4 (120-262)||(21236951-21237093)
chr4 (237-266)||(3979130-3979159)
chr4 (67-136)||(28497529-28497598)
chr4 (43-104)||(29182498-29182559)
chr4 (8-141)||(56225047-56225180)
chr4 (155-266)||(6957726-6957837)
chr4 (41-141)||(7092388-7092488)
chr4 (159-263)||(21107124-21107228)
chr4 (8-96)||(28236164-28236252)
chr4 (179-243)||(28550521-28550585)
chr4 (120-192)||(42566332-42566404)
chr4 (152-208)||(47265296-47265352)
[»] chr6 (26 HSPs)
chr6 (41-270)||(9593749-9593974)
chr6 (120-263)||(5095927-5096070)
chr6 (17-266)||(30031246-30031495)
chr6 (71-262)||(6055818-6056009)
chr6 (17-266)||(32755911-32756160)
chr6 (41-263)||(24665824-24666047)
chr6 (152-266)||(21351880-21351994)
chr6 (17-266)||(5631812-5632061)
chr6 (17-265)||(5258192-5258440)
chr6 (117-266)||(12890665-12890814)
chr6 (17-266)||(28085366-28085615)
chr6 (70-234)||(28026902-28027066)
chr6 (17-97)||(33084048-33084128)
chr6 (156-266)||(34548-34658)
chr6 (164-266)||(31818668-31818770)
chr6 (181-266)||(608315-608400)
chr6 (76-196)||(7133795-7133915)
chr6 (76-196)||(7136718-7136838)
chr6 (17-141)||(14389336-14389459)
chr6 (195-271)||(33711190-33711266)
chr6 (8-175)||(10099993-10100160)
chr6 (180-274)||(1747980-1748074)
chr6 (224-274)||(7513025-7513075)
chr6 (164-266)||(8364693-8364795)
chr6 (237-274)||(30700426-30700463)
chr6 (190-266)||(3206502-3206578)
[»] chr8 (34 HSPs)
chr8 (72-266)||(29520695-29520888)
chr8 (17-263)||(13589476-13589715)
chr8 (67-266)||(43904708-43904907)
chr8 (8-266)||(45419218-45419474)
chr8 (67-266)||(42854047-42854246)
chr8 (67-266)||(30559733-30559932)
chr8 (17-266)||(36545139-36545388)
chr8 (17-266)||(36565284-36565533)
chr8 (117-266)||(42469770-42469919)
chr8 (21-261)||(39946851-39947091)
chr8 (67-266)||(11523766-11523965)
chr8 (17-266)||(40813314-40813563)
chr8 (67-266)||(29700316-29700515)
chr8 (42-266)||(37077768-37077988)
chr8 (129-262)||(2796655-2796788)
chr8 (183-266)||(490491-490574)
chr8 (8-266)||(8932683-8932942)
chr8 (8-203)||(18125154-18125348)
chr8 (117-271)||(26904945-26905098)
chr8 (41-266)||(12491181-12491406)
chr8 (152-269)||(28169517-28169634)
chr8 (198-266)||(31715991-31716059)
chr8 (129-264)||(2027632-2027767)
chr8 (17-135)||(32043580-32043698)
chr8 (67-271)||(29735847-29736051)
chr8 (67-131)||(42584411-42584475)
chr8 (17-193)||(45512611-45512787)
chr8 (183-270)||(36069758-36069845)
chr8 (152-266)||(2216413-2216525)
chr8 (67-97)||(2776441-2776471)
chr8 (90-192)||(38178377-38178479)
chr8 (180-266)||(45041359-45041444)
chr8 (237-266)||(24558693-24558722)
chr8 (223-263)||(42584555-42584595)
[»] chr5 (47 HSPs)
chr5 (17-266)||(38684957-38685206)
chr5 (17-266)||(1275255-1275503)
chr5 (17-266)||(4496374-4496623)
chr5 (67-266)||(7359304-7359501)
chr5 (120-243)||(15168864-15168987)
chr5 (17-206)||(24178500-24178689)
chr5 (8-141)||(31636088-31636221)
chr5 (17-193)||(79503-79679)
chr5 (17-208)||(1287680-1287871)
chr5 (152-262)||(28007-28117)
chr5 (117-266)||(13561429-13561578)
chr5 (152-269)||(32516681-32516797)
chr5 (17-245)||(16347442-16347670)
chr5 (119-266)||(14911264-14911411)
chr5 (17-192)||(15489609-15489784)
chr5 (17-262)||(12492431-12492679)
chr5 (41-266)||(20456787-20457012)
chr5 (129-266)||(3301946-3302083)
chr5 (17-262)||(14749297-14749542)
chr5 (20-97)||(33667209-33667286)
chr5 (17-197)||(2075586-2075766)
chr5 (17-244)||(14665704-14665931)
chr5 (179-266)||(28276390-28276477)
chr5 (8-262)||(28976906-28977160)
chr5 (41-105)||(27553845-27553909)
chr5 (156-266)||(6889122-6889232)
chr5 (19-192)||(2712936-2713109)
chr5 (117-266)||(2915539-2915687)
chr5 (8-85)||(11002647-11002724)
chr5 (181-270)||(35615437-35615526)
chr5 (135-263)||(14725626-14725754)
chr5 (21-97)||(28676589-28676665)
chr5 (214-266)||(32442168-32442220)
chr5 (117-229)||(38501498-38501610)
chr5 (158-274)||(38684611-38684727)
chr5 (17-80)||(14667753-14667816)
chr5 (152-266)||(10639427-10639541)
chr5 (116-250)||(12576919-12577053)
chr5 (152-266)||(34273138-34273252)
chr5 (67-141)||(43475280-43475354)
chr5 (185-266)||(418077-418158)
chr5 (116-193)||(1525733-1525810)
chr5 (237-270)||(11069201-11069234)
chr5 (223-276)||(42504280-42504333)
chr5 (238-274)||(12534423-12534459)
chr5 (242-270)||(20367108-20367136)
chr5 (17-97)||(34273017-34273097)
[»] chr2 (37 HSPs)
chr2 (45-270)||(13149349-13149575)
chr2 (17-266)||(3866062-3866311)
chr2 (17-266)||(38429874-38430123)
chr2 (17-205)||(36183441-36183629)
chr2 (27-266)||(45367668-45367907)
chr2 (8-266)||(11992151-11992409)
chr2 (17-266)||(2610578-2610827)
chr2 (22-263)||(12141539-12141780)
chr2 (8-271)||(12734680-12734944)
chr2 (17-136)||(43752120-43752239)
chr2 (152-263)||(45543119-45543229)
chr2 (152-266)||(39029706-39029820)
chr2 (157-266)||(12882088-12882197)
chr2 (41-245)||(41763107-41763310)
chr2 (67-266)||(451691-451890)
chr2 (17-208)||(8180770-8180961)
chr2 (179-266)||(9496018-9496105)
chr2 (17-208)||(38452787-38452977)
chr2 (117-271)||(6237791-6237945)
chr2 (72-266)||(7326203-7326397)
chr2 (23-266)||(18958903-18959150)
chr2 (127-266)||(35755288-35755431)
chr2 (8-265)||(3243697-3243954)
chr2 (117-266)||(28508768-28508917)
chr2 (67-271)||(41197265-41197470)
chr2 (71-262)||(11744567-11744758)
chr2 (17-266)||(25834671-25834917)
chr2 (164-266)||(31959658-31959760)
chr2 (67-208)||(24583733-24583874)
chr2 (117-252)||(13592354-13592490)
chr2 (164-266)||(33504360-33504463)
chr2 (67-141)||(3481181-3481255)
chr2 (17-135)||(42092507-42092625)
chr2 (152-266)||(43573173-43573286)
chr2 (41-97)||(9578915-9578971)
chr2 (115-191)||(19235102-19235178)
chr2 (182-266)||(19336936-19337020)
[»] scaffold0570 (1 HSPs)
scaffold0570 (8-266)||(991-1249)
[»] scaffold0692 (1 HSPs)
scaffold0692 (117-264)||(4726-4873)
[»] scaffold0018 (2 HSPs)
scaffold0018 (17-266)||(31458-31707)
scaffold0018 (19-97)||(44080-44158)
[»] scaffold0041 (1 HSPs)
scaffold0041 (152-263)||(16703-16814)
[»] scaffold0024 (1 HSPs)
scaffold0024 (152-266)||(82844-82957)
[»] scaffold0045 (1 HSPs)
scaffold0045 (117-271)||(86647-86801)
[»] scaffold1259 (1 HSPs)
scaffold1259 (164-209)||(1619-1664)
[»] scaffold0060 (1 HSPs)
scaffold0060 (224-269)||(21299-21344)


Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-141; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 324 - 608
Target Start/End: Original strand, 52832345 - 52832626
Alignment:
Q  324 cttggtcaactccaagctctcaatgtcgctagaataaggttttctaaaggctttgttgtggtaataagaaggaggaagaaaagtaacgaatctaaaagtc 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52832345 cttggtcaactccaagctctcaatgtcgctagaataaggttttctaaaggctttgttgtggtaatgagaaggaggaagaaaagtaacgaatctaaaagtc 52832444  T
Q  424 tagttttgaatactgataatcaaaagttcctgccataatttgggagaaaattggtgtatgtaatacttgttttgcggagtaaaagtgggaaaagcgatgg 523  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52832445 tagttttgaatactgataatcaaaggttcctgccataatttgggagaaaattggtgtatgtaatacttgttttgcggagtaaaagtgggaagagcgatgg 52832544  T
Q  524 taatgcatcaaaagattcttagtttttaatgaattattttaattcatctcaactggtgttgatgtatgtgggaattgaggatggt 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||    
T  52832545 taatgcatcaaaagattcttagtttttaatgaattattttaattcatctcaactgg---tgatgtatgtgggaattgaggttggt 52832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 52832026 - 52832312
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  52832026 gacatcattaaagagagttggggtagtagctacagtagaaaagatgatacaaaataaatttaggtggtttgggcatgttaagagaagaccgatagatgtt 52832125  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  52832126 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaagtattagaaaagatttagagg 52832225  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagttgattctgtttagtaggataaga 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  52832226 ttgataagttgaatacaaatattgtttcagatagaacattatgacgtaatttgatccatatagttgattcaatttagtaggataaga 52832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 52561831 - 52561632
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||| ||||||| ||||||||||||||||||||||  ||||  ||||||||| ||||||||||||||   ||||||| ||||||||||| ||     
T  52561831 ttaggtggtttcggcatgtagagagaagaccgatagatgttgcagtacgaagagtagatcagatggaggagagttagattagaagaggtagaggaagact 52561732  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| | |||||||||| |||| ||| ||||||||||| || ||||| || ||||||| ||||  | |||||||||||| || ||||||||||||    
T  52561731 tagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggatccaaatatggtttcgggtagaacattatggcgaaatttgatccat 52561632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 9509308 - 9509557
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||| | ||| ||||||||||||| || ||||||   |||||| |||||||||||| |||||||||||| || ||| | | ||||      
T  9509308 agagagagttggggtagcacctatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagaccggtatatgctttagtactt 9509407  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||| | |||| |||||||||| ||| ||||| ||  | || |||    
T  9509408 agagtagatcagatggaggagagtcatattagaagaggtagaggaagacctagaaaaactataagataaactattaggaaagatttacagcctaatgagt 9509507  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  |  ||||||| ||||  ||| |||||||||| ||||||| |||||||    
T  9509508 tagagccaaatatggtttatgattgaacattatggcgtaattcgatccat 9509557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 39140509 - 39140750
Alignment:
Q  16 cagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtaca 115  Q
    ||||||||||||| |||| | ||| |||||||||||||  | |||||    ||||||||||||||||||| ||||||||||||||| ||||||| ||||     
T  39140509 cagagagagttggcgtagcacctatagtagaaaagatggcaaaaaattggcttaggtggtttgggcatgtagagagaagaccgatacatgttgtagtacg 39140608  T
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataag 215  Q
     ||||||||| ||||||| |||||||  ||||||| |||||||||||   ||  |||||    | ||||||||||||| ||||||||||||||| || ||    
T  39140609 aagagtagatcagatggatgagagtcagattagaagaggtagaggaa---ct--aaaaaagttatgagaaactattaggaaaaatttagaggttaattag 39140703  T
Q  216 ttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    ||| || ||||||| |||| ||||||||||||||| |||||||||||    
T  39140704 ttggatccaaatatggtttcagatagaacattatggcgtaatttgat 39140750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 9599686 - 9599437
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||||| |||  | ||| ||||||||||||| || ||||||   |||||||||| |||||| |  | ||| ||||   ||||||| | |||||     
T  9599686 agagagagttggagtaacacctatagtagaaaagatggtagaaaataggcttaggtggttcgggcatataaatagatgacctgcagatgttatagtacaa 9599587  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| |||||||||||||||  || | || ||||||||||| |||||||||||| | ||||||||||||||| ||| |||||||| || || |||    
T  9599586 agagtagatcagatggaggagagtcagatcataagaggtagaggaagacctagaaaaactacaagagaaactattaggaaatatttagagtttaatgagt 9599487  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || || |||| ||||  |||||||| ||||| |||||||||||||||    
T  9599486 ttgatccagatatggtttatgatagaacgttatggcgtaatttgatccat 9599437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 18469374 - 18469131
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||  | ||| |||||| ||||||||| ||||||   |||||| |||||| ||| | | |||||||| | |||||||||| ||||      
T  18469374 agagagagttggggtaacacctatagtagagaagatgatagaaaataggattaggtagtttggacatatagtgagaagactggtagatgttgtagtacga 18469275  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||||| || |||||||| ||||||| || | || ||||||| ||| || ||||||||  | |||||||||| |||| ||| ||| ||||||  || |||    
T  18469274 agagtaaatcagatggagaagagtcggatcaaaagaggtagatgaagacttagaaaaattataagagaaacttttaggaaatattaagaggtcaatgagt 18469175  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttg 260  Q
    || |||||||||| ||||  ||| ||||||||||  ||||||||    
T  18469174 tggatacaaatatagtttatgatcgaacattatggtgtaatttg 18469131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 32404768 - 32404569
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||||||||||||  |||| |||||||||||  |||||  | | |||  ||||||||| ||||||||||| |||| ||| | || ||||||||||| |||    
T  32404768 ttaggtggtttggatatgtagagagaagacctgtagattctatagtaaggagagtagagaagatggaggatagtcatatcacaagaggtagaggaagacc 32404669  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || |||||| | ||||||||||||||| ||| |||||||| || || |||| ||| |||| || ||||  |||| ||||| ||| |||||||||||||||    
T  32404668 tacaaaaactataagagaaactattaggaaagatttagagattaatgagttaaatccaaacatggtttatgatataacataatggcgtaatttgatccat 32404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 1210735 - 1210984
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  1210735 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 1210834  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  1210835 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 1210934  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  1210935 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 1210984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 4001747 - 4001498
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| ||||| |||||  ||||||  ||||||       
T  4001747 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacccgtagatgccgttgtaaga 4001648  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||   ||||||| |||| |||| ||||||||||  || |||    
T  4001647 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattaaaaaagatttagaggtcaatgagt 4001548  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| ||||||||  |||||| | |||||||||||    
T  4001547 tggatccaaatatggtttttgatagaaccctatgacatcatttgatccat 4001498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 41 - 206
Target Start/End: Complemental strand, 48431674 - 48431509
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    ||||||||||||| |  ||||||   ||||||||||||||||||| ||||||||||   ||||| |||| ||| ||||||| ||| |||||||||| |||    
T  48431674 agtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagatggaggatagt 48431575  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagag 206  Q
    || |||| || ||||||||||| ||| | |||||| | ||||||||||||||  ||| ||||||||    
T  48431574 cggattacaagaggtagaggaagacccaaaaaaactataagagaaactattaagaaagatttagag 48431509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 8671899 - 8672161
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||||| |  ||||||      
T  8671899 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgcc 8671998  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  |||||||||    
T  8671999 gtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagagg 8672098  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatag 270  Q
    |  || ||||| || ||||| | || |  ||||||||| |||  ||| |||||||||||||||    
T  8672099 tcaatgagttggatccaaatttggtgtatgatagaacactatagcgtcatttgatccatatag 8672161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 34792641 - 34792392
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||| ||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  34792641 agagagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 34792542  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||| ||||  || |||    
T  34792541 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttaaaggtcaatgagt 34792442  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | ||||  ||||||||| |||| ||| |||||||||||    
T  34792441 tggatccaaatttggtttatgatagaacactatggcgtcatttgatccat 34792392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 39318219 - 39318368
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||| |||| ||||||||||||||||  | | || ||||||||||| |||||| ||||| | ||||||||| ||||||||  ||||||||||  || |||    
T  39318219 agagcagatcagatggaggagagtcgggtcaaaagaggtagaggaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagt 39318318  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||| |||| |||||||||||||||    
T  39318319 tggatccaaatatggtttatgatagaacactatggcgtaatttgatccat 39318368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 696259 - 696487
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| ||| |||| ||||| |||||||||||  ||||||  ||||||       
T  696259 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggcttggacatgtagagagaagacccgtagatgccgttgtaaga 696358  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  696359 agagtagatcatatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 696458  T
Q  217 tgaatacaaatattgttttagatagaaca 245  Q
    |  || ||||||| ||||| |||||||||    
T  696459 ttgatccaaatatggtttttgatagaaca 696487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 25979473 - 25979274
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||| ||||| |||||||||||  |||||| |||||||  ||||||||||   |||||||||||||   ||| || ||||||||||| |||    
T  25979473 ttagatggtttggacatgtagagagaagacccgtagatgctgttgtaaggagagtagatcgaatggaggagagtcaggttaaaagaggtagaggaagacc 25979374  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
     |  ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||||| ||||  ||||||||| |||| ||| |||||||||||    
T  25979373 catgaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccat 25979274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 51602037 - 51602295
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| |||||||||  |||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  |||||||     
T  51602037 gacaccattagagagagtgagggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgtc 51602136  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  ||| |||| |||||||   |||||||||    
T  51602137 gtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagaaaaaccattagaagggatttagagg 51602236  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||| || ||||| | || |  |||||||||| ||| ||| |||||||||||    
T  51602237 tcaatgagttggatccaaatttggtgtatgatagaacatcatggcgtcatttgatccat 51602295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 22090086 - 22090335
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| | |||||||||  ||||||  || |||       
T  22090086 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagggagaagacccgtagatgccgtggtaaga 22090185  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    | ||||||| | |||||||||||||   ||| ||  |||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  22090186 aaagtagatcaaatggaggagagtcaagttaaaaggggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 22090285  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||||| |||||||||||    
T  22090286 tggatccaaatttggtgtatgatagaacactatgacgtcatttgatccat 22090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 37311947 - 37311798
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||| | |||||| |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  37311947 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggtagacctaggaaaaccatttgagaaaccattagaaaagatttagaggtcaatgagt 37311848  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| ||||||||| |||| ||| |||||||||||    
T  37311847 tggatccaaatatggtttttgatagaacactatggcgtcatttgatccat 37311798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 37463174 - 37462919
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||||||||||| | ||| |||||||||||   || ||||||   |||||||||||||||   |  |||| ||||   ||||||      
T  37463174 gacaccattagagagagttggggtagcacctatagtagaaaagacagtagaaaataggcttaggtggtttgggc---tatagagtagacatgtagatgcc 37463078  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaat-aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagag 206  Q
    || ||||  ||||||||| |||||||||||||||| || | ||  |||||||||| ||||||||||||| | ||||||||| || || ||  ||||||||    
T  37463077 gtagtacgaagagtagatcagatggaggagagtcggatcaaaaagaggtagaggattacctagaaaaactataagagaaacgatcaggaatgatttagag 37462978  T
Q  207 gttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| || ||||  || ||||||| ||||   ||||||||||||| |||||||||||||||    
T  37462977 gttaatgagtttgat-caaatatggtttatcatagaacattatggcgtaatttgatccat 37462919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 49347685 - 49347436
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||  |||||||||||  ||||||  || |||       
T  49347685 agagagagtaggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgcagagagaagacccgtagatgccgtggtaaga 49347586  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  49347585 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 49347486  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  49347485 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 49347436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 34827341 - 34827183
Alignment:
Q  72 tggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaa 171  Q
    |||||||| |||||  |||||||||||||||||| | | |||   | ||||||| ||||||||||||||    |||||| |  || ||||| ||||||||    
T  34827341 tggtttggacatgtaaagagaagaccgatagatgctctagtaagaaaagtagattagatggaggagagtaaggttagaaaaaataaaggaagacctagaa 34827242  T
Q  172 aaaccaaaagagaaactattagaaaaaatttagagg-ttgataagttgaatacaaatat 229  Q
    |||| | ||||||||||||||||||| ||||||||| || || |||||||| |||||||    
T  34827241 aaactataagagaaactattagaaaagatttagaggtttaatcagttgaatccaaatat 34827183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 2544589 - 2544761
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||| | ||| ||||||||||||| |  |||| | | ||||||||||||| ||||| ||||||||||| ||||||  | | |||  |    
T  2544589 agagagagttggggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagattctatagtaagg 2544688  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactat 190  Q
    ||||||||| |||||||||| ||||  |  |  | ||||||||||| |||||||||||| |  |||||||||||    
T  2544689 agagtagatcagatggaggatagtc-aaacactagaggtagaggaagacctagaaaaactatcagagaaactat 2544761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 30202422 - 30202173
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||| | || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  || |||       
T  30202422 agagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagagaagacccgtagatgccgtggtaaga 30202323  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||| |||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  30202322 agagtagatcaaatggacgagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 30202223  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  30202222 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 30202173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 38807963 - 38807714
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||| | ||||||| | ||| |||||||||| || || |||||| | |||| |||||| |||||||  ||||||||||  ||||||  || |||       
T  38807963 agagagaatgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttaggcatgtaaagagaagacccttagatgccgtcgtaaga 38807864  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||  |||||||||||||||  || | || || ||| |||| |||||  ||||| | ||||||||| ||||||||  ||||||||||  |  |||    
T  38807863 agagtagaccagatggaggagagtcagatcaaaagagctaggggaagacctaagaaaactataagagaaaccattagaaaggatttagaggtcaacgagt 38807764  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||| |||| ||||||||| |||||    
T  38807763 tggatccaaatatggtttatgatagaacactatggcgtaatttgttccat 38807714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 29128920 - 29129020
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||||||||| | ||||||||||||||| ||| ||||||||||| | |||||| || ||||||| ||||  ||||||||||||||  ||||| |||||    
T  29128920 acctagaaaaactataagagaaactattaggaaagatttagaggttaacaagttggatccaaatatggtttatgatagaacattatggtgtaatatgatc 29129019  T
Q  264 c 264  Q
    |    
T  29129020 c 29129020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 11331349 - 11331246
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||||||||  | ||||||||||||| ||||| ||||||||||| |||||||| ||  |||||| ||||  |||  |||||||||| |||||||||||    
T  11331349 acctagaaaaagtataagagaaactatttgaaaagatttagaggttaataagttggatttaaatatggtttatgatgaaacattatgatgtaatttgatc 11331250  T
Q  264 cata 267  Q
    ||||    
T  11331249 cata 11331246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 11489370 - 11489267
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||||||||  | ||||||||||||| ||||| ||||||||||| |||||||| ||  |||||| ||||  |||  |||||||||| |||||||||||    
T  11489370 acctagaaaaagtataagagaaactatttgaaaagatttagaggttaataagttggatttaaatatggtttatgatgaaacattatgatgtaatttgatc 11489271  T
Q  264 cata 267  Q
    ||||    
T  11489270 cata 11489267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 43240671 - 43240492
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||  ||||| ||||||   |||| | ||||| |||||| |||||||||||  |||||||||| |||       
T  43240671 agagagagtgggggtagcacctatagtagaaaaattgatagaaaataggcttagatagtttgagcatgtagagagaagacccgtagatgttgtggtaaga 43240572  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaa 196  Q
    ||||||||| | ||||||||||||    ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||    
T  43240571 agagtagatcaaatggaggagagttaagttaaaaaaggtagaggaagacctaggaaaactattagagaaaccattagaaa 43240492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 27848097 - 27847947
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||| ||||| | ||   |||||||||||| || |||||||  ||||||||||||||||||  |||||||||||  |||||| ||| |||       
T  27848097 agagagagttgtggtagcacctgtggtagaaaagatggtagaaaataagcttaggtggtttgggcatgcagagagaagacctgtagatgctgtagtatga 27847998  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacct 167  Q
    |||||| || |||||||||||||||   | |||| ||||||||||| ||||    
T  27847997 agagtatatcagatggaggagagtcagctcagaagaggtagaggaagacct 27847947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 36624158 - 36624006
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||||||||||||  | |||||||||||||  || ||||||   ||||||||||||| ||||| |||||||||| | ||     ||| |||       
T  36624158 agagagagttggggtagtacttgcagtagaaaagattgtagaaaataggcttaggtggtttgg-catgtcgagagaagactggta-----tgtagtatga 36624065  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
    ||||||||| |||||||||||||||| || |||| ||||||||||| ||||||| ||||    
T  36624064 agagtagatcagatggaggagagtcggatcagaagaggtagaggaagacctagagaaac 36624006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 41560354 - 41560468
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||| ||| |||||||||| | | ||||||||||||||| | | |||||||| || || ||||| || ||||||| | ||  ||||||||||||||     
T  41560354 aggtagaagaagacctagaaaagctataagagaaactattaggatacatttagagattaatgagttggatccaaatatgggttatgatagaacattatgg 41560453  T
Q  252 cgtaatttgatccat 266  Q
    |||||||||||||||    
T  41560454 cgtaatttgatccat 41560468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 8391762 - 8392011
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| | |||||| ||||| ||||| |||||  ||||||  ||||||       
T  8391762 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagattgtttggacatgtagagaggagacccgtagatgccgttgtaaga 8391861  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||| ||||||||| | ||| |  ||||| | ||| |||||  |||||||   ||||||  ||||||||| ||||||||||  ||||||    
T  8391862 agagtagatcaaatgaaggagagtcatgttaaaggaggtatatgaagacctaagaaaaccattcgagaaatcattagaaaagatttagaggtcaataagt 8391961  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || |||||||  |||| ||||||| | |||| ||| |||||||||||    
T  8391962 tggatccaaatatgatttttgatagaatactatggcgtcatttgatccat 8392011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 274
Target Start/End: Complemental strand, 16142120 - 16142015
Alignment:
Q  169 gaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatat 268  Q
    ||||||| | ||||||||| ||||||||| |||||||| || |||||||  || ||| ||| ||||  ||| ||||| |||||||||||||||||||| |    
T  16142120 gaaaaactataagagaaaccattagaaaagatttagagtttaataagttagatccaattatggtttatgatcgaacaatatgacgtaatttgatccatgt 16142021  T
Q  269 agttga 274  Q
    ||||||    
T  16142020 agttga 16142015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 27520346 - 27520245
Alignment:
Q  170 aaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatata 269  Q
    |||||| | |||||||||||||||||||||||||||| || || || || || |||||||  |||  ||||||||||||||| |||||||||| ||| ||    
T  27520346 aaaaactataagagaaactattagaaaaaatttagagattaatgagctggatccaaatatgatttatgatagaacattatgatgtaatttgattcatgta 27520247  T
Q  270 gt 271  Q
    ||    
T  27520246 gt 27520245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 32231246 - 32230997
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||  || || ||||||   |||| |||||||||||||| ||||||||||   ||||||  ||  ||       
T  32231246 agagagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacttgtagatgccgtcataaga 32231147  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  32231146 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 32231047  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||  | || |  ||||||||| ||||  ||||||||||||||    
T  32231046 tggatccaaagttggtctatgatagaacactatggtgtaatttgatccat 32230997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 15085924 - 15086084
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  |||||        
T  15085924 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttaga 15086023  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaacca 177  Q
    ||||||||| | |||||||||||||  |||| || ||||||||||| |||||  |||||||    
T  15086024 agagtagatcaaatggaggagagtcagattaaaagaggtagaggaagacctaagaaaacca 15086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 9592724 - 9592915
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| |  || ||||||   |||| ||| |||||||||| |||||||||||  ||||||  || |||       
T  9592724 agagagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatgggttgggcatgtagagagaagacccgtagatgccgtggtaaga 9592823  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||| | |  |||||||| ||||||||  ||||||||||    
T  9592824 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaacctattagagaaaccattagaaatgatttagaggt 9592915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 3819009 - 3818899
Alignment:
Q  156 agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgta 255  Q
    ||||||| |||| ||||||| | ||||||||||||||  ||| |||||||| || || ||||||||| |||||| ||||  ||| |||||||||| ||      
T  3819009 agaggaagaccttgaaaaactataagagaaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattatgtcgcc 3818910  T
Q  256 atttgatccat 266  Q
    |||||||||||    
T  3818909 atttgatccat 3818899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 7762582 - 7762484
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    |||||||||||| | ||||||||||||||||||| ||||||| ||| || ||||| ||  |||||| ||||   |||||||||||||  ||||||||||    
T  7762582 acctagaaaaactataagagaaactattagaaaagatttagatgttaatgagttggatctaaatatggtttataatagaacattatggtgtaatttgat 7762484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 9002442 - 9002577
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | || ||||| | || |||||||| ||||| || || ||||||| |||| |  ||| |||||||| ||||| ||||| || || |||| |    
T  9002442 agagtagatcaaatagaggataatcatattagaagaggtatagaaagacctagagaaactatcagaaaaactatttgaaaagatttatagattaataaat 9002541  T
Q  217 tgaatacaaatattgttttagatagaacattatgac 252  Q
    |||||  |||||| |||| |||||||||||||||||    
T  9002542 tgaatctaaatatagtttaagatagaacattatgac 9002577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 50771795 - 50771673
Alignment:
Q  69 aggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaataccta 168  Q
    ||||||||||||| ||| ||||||||||| || ||| |||| |||  |||||||||| ||||||||| |||||  || |  | |||||| |||| |||||    
T  50771795 aggtggtttgggc-tgtagagagaagacccatggattttgtagtaaggagagtagatcagatggaggggagtcaaatgactagaggtaggggaagaccta 50771697  T
Q  169 gaaaaaccaaaagagaaactatta 192  Q
    ||||||| | ||| ||||||||||    
T  50771696 gaaaaactataagcgaaactatta 50771673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 10200435 - 10200349
Alignment:
Q  180 agagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||| |||||||||||| |||||||| | ||| ||||| || ||||||| ||||  |||||||||| |||  ||||||||||||||    
T  10200435 agagagactattagaaaagatttagagatcgatgagttggatccaaatatggtttatgatagaacatcatggtgtaatttgatccat 10200349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 8628155 - 8628212
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggtt 209  Q
    ||||||||||| |||||||||||| | || |||||||||||| ||| |||||||||||    
T  8628155 aggtagaggaagacctagaaaaactataacagaaactattaggaaagatttagaggtt 8628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 10569309 - 10569241
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggagg 135  Q
    ||||||||||||||||||| |||||||||||  |||||  ||| |||| ||| |||||| |||||||||    
T  10569309 ttaggtggtttgggcatgtagagagaagacctgtagattctgtagtacggagggtagattagatggagg 10569241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 32083037 - 32082877
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||  ||||| |||||  ||||||  ||||||       
T  32083037 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgcagagaggagacccgtagatgccgttgtaaga 32082938  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaacca 177  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||    
T  32082937 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaacca 32082877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 52739641 - 52739557
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttt-tagatagaacattatgacgtaatttgat 262  Q
    ||||||||||||||| ||| ||||  ||||| || |||||||| |||||||  ||| | |||||||||||||||| |||||||||    
T  52739641 aagagaaactattaggaaagatttttaggttaatgagttgaatccaaatataatttatggatagaacattatgacttaatttgat 52739557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 1661420 - 1661507
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagat 104  Q
    ||||||||||||||||| | ||| ||||||||||||| |  ||||||   | || ||||||| |||||| ||||||||||| ||||||    
T  1661420 agagagagttggggtagcacctatagtagaaaagatggtggaaaataggctcagatggtttgagcatgtagagagaagacctatagat 1661507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 4029112 - 4029291
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||| ||| || || ||||||   ||||  ||||||| ||||| |||||||||||  ||||||  || |||       
T  4029112 agagagagtgggggtagcacctagagtagacaagttggtagaaaataggcttagaaggtttggacatgtagagagaagacccgtagatgccgtggtaaga 4029211  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaa 196  Q
    ||| ||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||    
T  4029212 agaatagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaa 4029291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 8343035 - 8342936
Alignment:
Q  155 tagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgt 254  Q
    |||||||| |||||||||||| | ||||||||| ||||  ||| || ||||| || || ||||| ||| |||||| || || ||| ||||||||||||||    
T  8343035 tagaggaagacctagaaaaactataagagaaacaattaataaagatctagagattaatgagttggatagaaatatagtatttgatggaacattatgacgt 8342936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 51441057 - 51440878
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||  | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||   |||||  || |||       
T  51441057 agagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccggagatgccgtggtaaga 51440958  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaa 196  Q
    ||||||||  | |||||||||||||   ||| |  ||||||||||| |||||| ||||| |  |||||||| ||||||||    
T  51440957 agagtagagcaaatggaggagagtcaagttaaaggaggtagaggaagacctaggaaaactattagagaaaccattagaaa 51440878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 4415474 - 4415588
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || ||||| ||  ||||||  ||||  |||||||||||||     
T  4415474 aggtagaggaaaacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggatctaaatatgattttttatagaacattatgg 4415573  T
Q  252 cgtaatttgatccat 266  Q
    | | |||||||||||    
T  4415574 catcatttgatccat 4415588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 6025734 - 6025844
Alignment:
Q  156 agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgta 255  Q
    ||||||| |||||||||||| | |||||| |||| || |||| || ||||| || || ||||| ||| |||||| || |  |||||||||| ||| |||     
T  6025734 agaggaagacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagttggatagaaatatggtatctgatagaacatgatggcgtc 6025833  T
Q  256 atttgatccat 266  Q
    |||||||||||    
T  6025834 atttgatccat 6025844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 11941732 - 11941618
Alignment:
Q  157 gaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaa 256  Q
    |||||| |||||||||||| | ||||||| ||||||||||| |||||||| ||  | ||||| ||   | ||| ||||  |||| ||||||||| ||||     
T  11941732 gaggaagacctagaaaaacaataagagaagctattagaaaagatttagagattattgagttggatcggagtatggtttatgataaaacattatggcgtat 11941633  T
Q  257 tttgatccatatagt 271  Q
    |||||||||| ||||    
T  11941632 tttgatccatgtagt 11941618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 26299210 - 26299276
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttg 218  Q
    ||||||||||| |||||| ||||| | ||||||||||||||  ||| ||||||||||| || |||||    
T  26299210 aggtagaggaaaacctaggaaaactataagagaaactattatgaaagatttagaggttaatgagttg 26299276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 52921205 - 52921319
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || | ||| || ||||||| ||||  ||||||||| |||      
T  52921205 aggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgaattggatccaaatatggtttatgatagaacactattg 52921304  T
Q  252 cgtaatttgatccat 266  Q
    ||| |||||||||||    
T  52921305 cgtcatttgatccat 52921319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 5338764 - 5338833
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggagga 136  Q
    ||||||||||||||||||  |||||||||||  |||||| | | |||  |||||||||| ||||||||||    
T  5338764 ttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagatggagga 5338833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 35828842 - 35828718
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||| | |||| | |||  |||||||||||| |  ||||||  |||||||||||||| | ||| ||||||||||| ||||||  ||| |||  |    
T  35828842 agagagagtttgagtagcacctatggtagaaaagatggtggaaaatagggttaggtggtttggacgtgtagagagaagacctatagattatgtagtaagg 35828743  T
Q  117 agagtagataagatggaggagagtc 141  Q
    |||| |||| | |||||||| ||||    
T  35828742 agagaagatcatatggaggatagtc 35828718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 36136754 - 36136999
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||| | ||| ||||||||||||| || ||||||   |||||| |||||||||| | ||||||| ||| ||||||||||| ||||      
T  36136754 agagagagttggggtagcacctatagtagaaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaatacctatagatgttgtagtacga 36136853  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||| |||| |||||||||||||||  || |||| | ||||||||| |||||||||||| | ||||||||||||| | ||| ||||||| ||| || | |    
T  36136854 agagcagatcagatggaggagagtcagatcagaagaagtagaggaagacctagaaaaactataagagaaactatttggaaagatttagatgttaatgaat 36136953  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    || || ||||||| ||||  |||||||||||||   ||||||||||    
T  36136954 tggatccaaatatggtttatgatagaacattatagggtaatttgat 36136999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 7189518 - 7189266
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgt---- 112  Q
    ||||||||||||||| | | ||| ||||||||||||| || |||||||  ||||||||||||||||||| ||||||| | ||||||||||||| ||        
T  7189518 agagagagttggggtcgcacctatagtagaaaagatggtagaaaataagcttaggtggtttgggcatgtagagagaaaatcgatagatgttgtagttgta 7189419  T
Q  113 --acagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaact-attagaaaaaatttagaggtt 209  Q
      |   ||||||||| ||||||||||||||| |||||||| | ||||||||| |||||||||||| | ||| ||| || ||||||||| |||||||||||    
T  7189418 gtatgaagagtagatcagatggaggagagtcatattagaagatgtagaggaagacctagaaaaactataagggaagctaattagaaaagatttagaggtt 7189319  T
Q  210 gataagttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
     |  ||||||||| |||| | |||| | |||||||||||| || |||| ||||    
T  7189318 aaggagttgaatataaatttggtttcaaatagaacattataacttaatgtgat 7189266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 43281655 - 43281913
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||      
T  43281655 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgcc 43281754  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    ||||||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| |||||||||    
T  43281755 gttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagagg 43281854  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||| || ||||||| ||||| ||||||||| |||| ||| |||||||||||    
T  43281855 tcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccat 43281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 28628175 - 28627976
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||||||||||||||||||  |||||| |||  |||||  ||| |||  ||||||||||  ||||||||| ||||  || | || ||||||||||| |||    
T  28628175 ttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccgatggaggatagtcaaatcacaagaggtagaggaagacc 28628076  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| | ||||||||||||||| ||| |||||||| || || ||||| || ||||| | ||||  |||||||||||||| |||||||||||||||    
T  28628075 tagaaaaactataagagaaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccat 28627976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 266
Target Start/End: Complemental strand, 2886013 - 2885765
Alignment:
Q  18 gagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacaga 117  Q
    |||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||||| |  ||||||  |||||||  |    
T  2886013 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgccgttgtacgaa 2885914  T
Q  118 gagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagtt 217  Q
    |||||||| |||||||||||||||   | | || ||||||| ||| |||||| ||||| | ||||||||| ||||||||  |||||| |||  || ||||    
T  2885913 gagtagatcagatggaggagagtcaggtcaaaagaggtagaagaagacctaggaaaactataagagaaaccattagaaatgatttagtggtcaatgagtt 2885814  T
Q  218 gaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    | |  ||||||| ||||  ||||||||| ||||  ||||||||||||||    
T  2885813 ggacccaaatatggtttatgatagaacactatggtgtaatttgatccat 2885765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 13859300 - 13859110
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  |||||| ||| |||       
T  13859300 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaaga 13859201  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    ||||||||| | |||||||||||||   |||||| ||||||||||| |||||| ||||| |  |||||||| ||||||||  |||||||||    
T  13859200 agagtagatcaaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagagg 13859110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 11593950 - 11594199
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||  ||||| |||||||||||||| |||||||||||  ||||||   | |||       
T  11593950 agagagagtgggggtagcacctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtagagagaagacccgtagatgccatggtaaga 11594049  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  11594050 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 11594149  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  11594150 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 11594199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 266
Target Start/End: Original strand, 43491348 - 43491547
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||||||||| |||||||||||  ||||||  || |||   ||||| ||| |||||||||||||||   | | || ||||||||||| |||    
T  43491348 ttagatggtttgggcatgtagagagaagacccgtagatgccgtcgtaagaagagttgatcagatggaggagagtcaggtcaaaagaggtagaggaagacc 43491447  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| ||||  | ||||||||| |||||||| |||||||||||  |||||||| || |||||||  |||  ||||||||| ||||| ||||||| ||||||    
T  43491448 taggaaaattataagagaaaccattagaaagaatttagaggtcaataagttggatccaaatatgatttatgatagaacactatgatgtaatttcatccat 43491547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 40980085 - 40979971
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||| ||||||||||  || ||||| || ||||||| ||||  ||||||||| ||||     
T  40980085 aggtagaggaagacctaggaaaactataagagaaactattagaaaagatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatgg 40979986  T
Q  252 cgtaatttgatccat 266  Q
    |||||||||||||||    
T  40979985 cgtaatttgatccat 40979971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 12841567 - 12841318
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| | ||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  12841567 agagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 12841468  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  12841467 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 12841368  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | ||||  ||||||||| |||| ||| |||||||||||    
T  12841367 tgtatccaaatttggtttatgatagaacactatggcgtcatttgatccat 12841318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 9210866 - 9210747
Alignment:
Q  147 agaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacat 246  Q
    |||| |||| |||||| |||||| ||||| | |||||||||| |||| ||||||||||||||| || ||||| || ||||||| ||||  |||| |||||    
T  9210866 agaagaggttgaggaagacctaggaaaactataagagaaacttttaggaaaaatttagaggttaatgagttggatccaaatatggtttatgatacaacat 9210767  T
Q  247 tatgacgtaatttgatccat 266  Q
    |||| |||||||||||||||    
T  9210766 tatggcgtaatttgatccat 9210747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 37617934 - 37618184
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaag-ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtaca 115  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||  | | |||| |||||||||||||| |||||||||||  ||||||  || |||      
T  37617934 agagagagtgggggtagcacctatagtagaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaag 37618033  T
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataag 215  Q
     ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  |||||    
T  37618034 aagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaataag 37618133  T
Q  216 ttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| || ||||| | || |  ||||||||| ||||  || |||||||||||    
T  37618134 ttggatccaaatttggtgtatgatagaacactatggtgtcatttgatccat 37618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 49029266 - 49029515
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || ||| ||    
T  49029266 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggta-ag 49029364  T
Q  117 a-gagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataag 215  Q
    | || ||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || ||    
T  49029365 acgaatagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgag 49029464  T
Q  216 ttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  49029465 ttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 49029515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 29650374 - 29650623
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| |||| || | ||| |||||||||  || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  ||||||       
T  29650374 agagagagtgggggcagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaaga 29650473  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||| ||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  29650474 agagtagatcaaatggaggagagtcaggttaaaagaggtaaaggaaaacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 29650573  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||||| ||||| ||||||||| || | ||| |||||||||||    
T  29650574 ttgatccaaatatggtttttgatagaacactaaggcgtcatttgatccat 29650623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 21517525 - 21517426
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||||||||| | |||||||||||||| |||| |||||||| || |||||||| || |||||||  |||  |||| ||||||||||||||||||||||    
T  21517525 acctagaaaaactataagagaaactattaaaaaatatttagagattaataagttggatccaaatatgatttatgatataacattatgacgtaatttgatc 21517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 33350098 - 33349907
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||| | | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  33350098 agagagagtgggggttgcacctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 33349999  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||    
T  33349998 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaatgatttagaggt 33349907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 44855464 - 44855273
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||| ||||| ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  ||  ||       
T  44855464 agagagagtggggatagtacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtcataaga 44855365  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||| | |||||||||||||   ||| || | ||||||||| |||||| ||||| |  |||||||| ||||||||| ||||||||||    
T  44855364 agagtagatcaaatggaggagagtcaagttaaaagaagtagaggaagacctaggaaaactattagagaaaccattagaaaagatttagaggt 44855273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 34869410 - 34869659
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  || |||  || |||       
T  34869410 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtaaatgccgtggtaaga 34869509  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||||||||   |||| ||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  34869510 agagtagatccaatggtggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 34869609  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  34869610 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 34869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 35906493 - 35906244
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| | ||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  35906493 agagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 35906394  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||||| || | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  |||| |||||  || |||    
T  35906393 agagtatatcatatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttcgaggtcaatgagt 35906294  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  35906293 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 35906244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 46356148 - 46355899
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||| | ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||||||   |||||||||| |||       
T  46356148 agagagaatgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacacgtagatgttgtggtaaga 46356049  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  | |||||| ||||||||  ||||| ||||  || |||    
T  46356048 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaaaacctaggaaaactattaaagaaaccattagaaaggatttaaaggtcaatgagt 46355949  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| | | |||||||||||    
T  46355948 tggatccaaatctggtgtatgatagaacactatgccatcatttgatccat 46355899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 31005213 - 31005392
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  31005213 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 31005312  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaa 196  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||| ||||    
T  31005313 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccatttgaaa 31005392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 36239938 - 36239839
Alignment:
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| | ||||||||||||||| |||||||||||| || |  ||||| || |||||||  |||  |||||||||||||| |||||||||||||||    
T  36239938 tagaaaaactataagagaaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccat 36239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 39906662 - 39906415
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||  |||||| | ||| |||||||||| || || ||||||   |||| || ||||||||||| ||||||||||| |||||||| || |||       
T  39906662 agagagagtgagggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccatagatgtcgtggtaaga 39906563  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||  ||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || | |    
T  39906562 agagtagatcaaatggaggag--tcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgact 39906465  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  39906464 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 39906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 45836772 - 45836525
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  ||||||       
T  45836772 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaaga 45836673  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||||||||||  ||    |  ||||||||| | |||||| | ||| |  |||||||| ||||||||  ||||||||||  || |||    
T  45836672 agagtagatcaaatggaggagagt--taggttatgaggtagagggagacctaggacaactattagagaaaccattagaaaggatttagaggtcaatgagt 45836575  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||| |||| ||| |||||||||||    
T  45836574 tggatccaaatatggtttatgatagaacactatggcgtcatttgatccat 45836525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 6374858 - 6375107
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| ||||||| |||||| |||||||||||  |||||| ||| |||       
T  6374858 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagaccagtagatgctgtggtaaga 6374957  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    || |||||| | ||| |||||| ||   ||| || ||||||||||| | |||| ||||| |  |||||||| |||||||| |||||||||||   | |||    
T  6374958 agggtagatcaaatgtaggagaatcaagttaaaagaggtagaggaagatctaggaaaactattagagaaaccattagaaagaatttagaggtcagtgagt 6375057  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  6375058 tggatccaaatttagtgtatgatagaacactatggcgtcatttgatccat 6375107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 7273190 - 7273339
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||||||||  ||||||||||||||   | | || ||||||||||| |||||  ||||| | ||||||||| ||||||||| ||| ||||||  || |||    
T  7273190 agagtagattggatggaggagagtcaggtcaaaagaggtagaggaagacctatgaaaactataagagaaaccattagaaaatattcagaggtcaatgagt 7273289  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  |||| | || ||||||||||||||||||||    
T  7273290 tggattcaaatatggtttatgatatagcactatgacgtaatttgatccat 7273339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 266
Target Start/End: Complemental strand, 31682870 - 31682645
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || ||||||   |||| ||||||||| |||| |||||||||||  ||||||  ||  ||   ||||||||| | ||||||||||||    
T  31682870 agtagaaaagttggtagaaaataggcttagatggtttgggtatgtagagagaagacccgtagatgccgtcataagaagagtagatcaaatggaggagagt 31682771  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagata 240  Q
    |   |||||| ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || | ||| || || || | ||||  ||||    
T  31682770 caagttagaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgaattggatccatatttggtttatgata 31682671  T
Q  241 gaacattatgacgtaatttgatccat 266  Q
    ||||| |||| ||| |||||||||||    
T  31682670 gaacactatggcgtcatttgatccat 31682645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 36514509 - 36514424
Alignment:
Q  7 ggacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagaga 92  Q
    ||||| ||| ||||||||||||||||| | ||| ||||||||||||| || ||| || | ||||||||||||||||||| ||||||    
T  36514509 ggacaacattagagagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagaga 36514424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 47848664 - 47848912
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||||||||||   ||| ||||||||||||| |  ||||||   ||||||||||||||||||| ||||||||||   || ||  |||  ||  |    
T  47848664 agagagagttggggtagcgcctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaagg 47848763  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| |||||||||| ||||  || |  | ||| ||||||| | |||||||||| | ||||||||||||| | ||| |||| | | || || ||     
T  47848764 agagtagatcagatggaggatagtctgatcactagaggcagaggaagaactagaaaaactataagagaaactatt-ggaaagatttggggattaatgagc 47848862  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||||||||   |||||||||||||    
T  47848863 tggatccaaatatggtttatgatagaacattatggtttaatttgatccat 47848912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 35922407 - 35922495
Alignment:
Q  181 gagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatata 269  Q
    ||||||||||||  ||| ||||||||||| || ||||||||  ||||||  |||  |||||||||||||||| ||||||||||||||||    
T  35922407 gagaaactattaagaaagatttagaggttaatgagttgaatctaaatatgatttatgatagaacattatgacctaatttgatccatata 35922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 1531583 - 1531420
Alignment:
Q  87 gagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaa 186  Q
    |||||||||||  |||||||||| ||||  | ||||||| ||||  ||||||| |  || | || ||||||||||| ||||| |||||| | |||  |||    
T  1531583 gagagaagacctctagatgttgtagtacgaatagtagatcagataaaggagagccagatcaaaagaggtagaggaagacctaaaaaaactataagcaaaa 1531484  T
Q  187 ctattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatg 250  Q
     |||||| ||||||||||||||| || ||||| |  ||||||| ||||  ||||||||||||||    
T  1531483 ttattaggaaaaatttagaggttaatgagttggacccaaatatggtttgggatagaacattatg 1531420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 33072933 - 33073100
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| || ||||||||||| |||||||||||  |||||||     
T  33072933 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccgtagatgtc 33073032  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
    || |||   ||||||||| | |||||| ||||||   ||| || ||||||||||| |||||| |||||    
T  33073033 gtggtaagaagagtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaac 33073100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 38135454 - 38135256
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||||| ||||| || ||||||||  ||||| |||| |||  |||| ||||| |||||||||| ||||  || |  | ||| ||| ||| |||    
T  38135454 ttaggtggtttggacatgtagacagaagaccagtagattttgtagtaaggaga-tagatcagatggaggatagtcagatcattagaggcagatgaagacc 38135356  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||  | |||||||||||||| |||| |||||||| || || ||||| |   |||||| | ||  ||||||| |||||| |||||||||||||||    
T  38135355 tagaaaaagtataagagaaactattaaaaaagatttagagattaatgagttggaccgaaatatgggttatgatagaatattatggcgtaatttgatccat 38135256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 35559286 - 35559036
Alignment:
Q  17 agagagagttggggtagtagct-acagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtaca 115  Q
    ||||||||| ||||||| | || | |||||||||| || || ||||||   |||| || ||||| ||| | | |||||||||  ||||||| || |||      
T  35559286 agagagagtgggggtagcaccttatagtagaaaagttggtagaaaataggcttagatgatttggacatttagtgagaagacccctagatgtcgtggtaag 35559187  T
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataag 215  Q
     ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||| ||||||||||  || ||    
T  35559186 aagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgag 35559087  T
Q  216 ttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| || ||||| | ||||  | |||||||||||  | | |||||||||||    
T  35559086 ttggatccaaatttagtttatggtagaacattatagcatcatttgatccat 35559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 263
Target Start/End: Original strand, 1011107 - 1011282
Alignment:
Q  87 gagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaa 186  Q
    ||||||||||   |||||||||| ||||  ||||||||| ||||  |||||||||  || | || ||||||||||| |||||||||||  |  |||||||    
T  1011107 gagagaagacatctagatgttgtagtacgaagagtagatcagataaaggagagtcagatcaaaagaggtagaggaagacctagaaaaattatgagagaaa 1011206  T
Q  187 ctattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
     |||||| ||| ||||| ||||| || | ||| || | ||||| ||||  ||||||||||||||  |||||||||||    
T  1011207 ttattaggaaatatttaaaggttaatgatttggat-ccaatatggtttaggatagaacattatggtgtaatttgatc 1011282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 266
Target Start/End: Complemental strand, 36869526 - 36869287
Alignment:
Q  27 ggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagata 126  Q
    ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  |||||| |||   |   |||||||||     
T  36869526 ggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttggtcatgtagagagaagacccgtagatgctgtcagaagaagagtagatc 36869427  T
Q  127 agatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaa 226  Q
    | |||||||||||||   |||||||||||||||||| |||| | ||||| |  | |||||| ||||||||  ||||||| ||  || ||||  || ||||    
T  36869426 aaatggaggagagtcaagttagaataggtagaggaagacctgggaaaactattaaagaaaccattagaaaggatttagatgtcaatgagttagattcaaa 36869327  T
Q  227 tattgtttta-gatagaacattatgacgtaatttgatccat 266  Q
    | ||| |||| ||||||||| |||| ||| |||||||||||    
T  36869326 t-ttgatttatgatagaacactatggcgtcatttgatccat 36869287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 14057630 - 14057717
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||| ||| ||||||||||| ||  |||  || ||||||| ||||  ||||||||||||||  ||||||||||||||    
T  14057630 aagagaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccat 14057717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 14367658 - 14367745
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||| ||| ||||||||||| ||  |||  || ||||||| ||||  ||||||||||||||  ||||||||||||||    
T  14367658 aagagaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccat 14367745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 36101862 - 36101812
Alignment:
Q  224 aaatattgttttagatagaacattatgacgtaatttgatccatatagttga 274  Q
    |||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  36101862 aaatatggtttatgatagaacattatgacgtaatttgatccatgtagttga 36101812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 38606994 - 38607154
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||| | || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  |||||        
T  38606994 agagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttaga 38607093  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaacca 177  Q
    ||||||||| | |||||||||||||   |||||| ||| ||||||| |||||  |||||||    
T  38607094 agagtagatcaaatggaggagagtcacgttagaagagggagaggaagacctaagaaaacca 38607154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 48736191 - 48736111
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||||||||||||||| | |||||||||||||||||  | ||| || | ||||||||||||  ||||| ||| |||||||    
T  48736191 agagagagttggggtagcacctacagtagaaaagatgggagaaactagacttaggtggtttgctcatgtagagcgaagacc 48736111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 5335910 - 5335988
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaaga 95  Q
    ||||||||||||||||| | ||| ||||| ||||||| |  ||| || | ||||||||||||||||| | |||||||||    
T  5335910 agagagagttggggtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggcatatagagagaaga 5335988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 18795839 - 18795889
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatat 229  Q
    ||||||||||||| ||||| ||||||||||| || |||||||| |||||||    
T  18795839 aagagaaactattcgaaaagatttagaggttaatgagttgaattcaaatat 18795889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 24598344 - 24598230
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||  |||| ||   ||||||| ||||||||| ||||||||||  || |||||||| |||||||  |||| ||||||| ||| ||     
T  24598344 aggtagaggaagacctaagaaaatcattcgagaaaccattagaaaagatttagaggtcaatgagttgaatccaaatatgatttttgatagaatattttgg 24598245  T
Q  252 cgtaatttgatccat 266  Q
    | | |||||||||||    
T  24598244 catcatttgatccat 24598230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 45601601 - 45601715
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||||||||| | ||||||||| ||||  ||| || ||||| || || ||||| ||  ||||||  |||  ||||||||| ||||     
T  45601601 aggtagaggaagacctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatgg 45601700  T
Q  252 cgtaatttgatccat 266  Q
     ||||||||||||||    
T  45601701 tgtaatttgatccat 45601715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 19262725 - 19262609
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||| | |||  |||||||||||| || ||| |    |||||||||||| |||||| |||||||||||  ||||| |||| |||       
T  19262725 agagagagttggggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagat-ttgtagtaaga 19262627  T
Q  117 agagtagataagatggag 134  Q
    ||||||||| ||||||||    
T  19262626 agagtagatcagatggag 19262609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 266
Target Start/End: Original strand, 36652006 - 36652231
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || ||||||   |||| ||||||  |||||| |||||||||||  ||||||  || |||   ||||||||| | || ||||| |||    
T  36652006 agtagaaaagttggtagaaaataggcttagatggtttcagcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatagaggatagt 36652105  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagata 240  Q
    |   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||| ||||||  || |||||||| ||||| | || |  ||||    
T  36652106 caagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggattcagaggtcaatgagttgaatccaaatttggtgtatgata 36652205  T
Q  241 gaacattatgacgtaatttgatccat 266  Q
    ||||| |||| ||| |||||||||||    
T  36652206 gaacactatggcgtcatttgatccat 36652231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 266
Target Start/End: Complemental strand, 44401199 - 44401170
Alignment:
Q  237 gatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||||||||||||||||||    
T  44401199 gatagaacattatgacgtaatttgatccat 44401170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 42187593 - 42187680
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaaca-ttatgacgtaatttgatccat 266  Q
    ||||||||||||||| ||| |||||||| || || ||||| || ||||| | ||||  ||||||||| ||||| |||||||||||||||    
T  42187593 aagagaaactattaggaaatatttagagattaattagttggatccaaat-tggtttatgatagaacatttatggcgtaatttgatccat 42187680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 39600973 - 39600724
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||||| ||| ||||||||||||| |  |||| ||  ||||||||||| |||||||  ||||||||||  |||||  ||| |    |    
T  39600973 agagagagttggggtagtacctatagtagaaaagatggtggaaaacaagcttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgagg 39600874  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| |||| ||||| ||||  |||  || ||||||||||| |||||||||||| | ||||||||||||||  ||| ||||||||||| || |||    
T  39600873 agagtagatcagatcgaggatagtcagattgcaagaggtagaggaagacctagaaaaactataagagaaactattaagaaagatttagaggttaatgagt 39600774  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | ||||  ||||||||||||||  ||||||||||||||    
T  39600773 tggatccaaatctggtttacgatagaacattatggtgtaatttgatccat 39600724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 266
Target Start/End: Original strand, 48508275 - 48508474
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||||||||| |||||||||||  |||||||||| |||   ||||||||| |||||||||||||||   | | || ||||||||||| |||    
T  48508275 ttagatggtttgggcatgtagagagaagacccgtagatgttgtcgtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacc 48508374  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| ||||| | ||||||||| ||||||||  ||||||||||  || ||||| || ||||||| ||||  ||||||||| |||| |||||||||||||||    
T  48508375 taggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccat 48508474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 19676372 - 19676124
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||| |||||||||| | ||| |||| ||||||||||| |||||    ||||||||| | ||||||| |||||||||||  |||||| ||| |||||     
T  19676372 agagagtgttggggtagcacctatagtacaaaagatgatagaaaattggcttaggtggtattggcatgtagagagaagacctgtagatgctgtagtacaa 19676273  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||| |||| |||| ||||||||||  || | || ||||| ||||| ||||||||||||   ||||||||||||||| ||||||||||||||| || |||    
T  19676272 agagaagatcagatagaggagagtcagatcaaaagaggta-aggaagacctagaaaaactgtaagagaaactattaggaaaaatttagaggttaatgagt 19676174  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || |||||||  | |  |||||| ||||||| ||| |||||||||||    
T  19676173 tggatccaaatatgctgtatgatagagcattatggcgtgatttgatccat 19676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 12 - 271
Target Start/End: Original strand, 26490300 - 26490559
Alignment:
Q  12 tcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttg 111  Q
    |||| ||| ||||||| ||||| | ||| ||||||||||||| || ||||||   ||||||||||||| ||||| || | ||||||| | |||||||| |    
T  26490300 tcattagacagagttgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgtagataaaagaccgttggatgttgtag 26490399  T
Q  112 tacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttga 211  Q
    |||  ||||||||| |||| ||||||| || |||||||  ||| || |||| |  ||||||||| | ||||||||||||||||||| ||||||||  | |    
T  26490400 tacgaagagtagatcagatagaggagaatcatattagatgaggcagtggaagatatagaaaaactagaagagaaactattagaaaagatttagagactaa 26490499  T
Q  212 taagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
    | ||||  || ||||| |  ||| | |||||| |||||| ||||||||||||||||||||    
T  26490500 tgagtttgatccaaatgtgatttcatatagaatattatggcgtaatttgatccatatagt 26490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 54128368 - 54128618
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||| |||||||||| | ||| ||||||||||||| || ||||||   ||||||||||||||||||| |||| ||||||  |||||| ||  ||||      
T  54128368 agagagtgttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagacctgtagatgatgcagtacgt 54128467  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaacca-aaagagaaactattagaaaaaatttagaggttgataag 215  Q
    ||||||||| |||||||||  ||||  ||   || ||||||||||| |||||||||||| |  |||||||||||| || ||| ||||||||||  || ||    
T  54128468 agagtagatcagatggaggttagtcagatcgaaagaggtagaggaagacctagaaaaactattaagagaaactataaggaaagatttagaggtcaatgag 54128567  T
Q  216 ttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| |  ||||||| ||||  |||||||||||||| | |||||||||||||    
T  54128568 ttggacccaaatatggtttatgatagaacattatggcataatttgatccat 54128618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 250
Target Start/End: Original strand, 39235154 - 39235361
Alignment:
Q  43 tagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcg 142  Q
    ||||||||||| || ||||||   ||||||||||||||||||| |||||||||||  |||||||||| ||||  ||||||||| |||||||||| ||||     
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggaggaaagtca 39235253  T
Q  143 tattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagataga 242  Q
     || | || ||||||||||| ||| | |||||| | | || |||||||||| ||| ||||||| ||| || ||||| ||  |||||| ||||  ||||||    
T  39235254 gatcaaaagaggtagaggaagacccaaaaaaactataggataaactattaggaaagatttagaagttaatgagttggatctaaatatggtttacgataga 39235353  T
Q  243 acattatg 250  Q
    ||||||||    
T  39235354 acattatg 39235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 49503846 - 49503691
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||  ||||| | ||| ||||||||||||| || ||||||   ||||||||||||||||||| ||||||||||| |||||||||||  ||||     
T  49503846 agagagagttcaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagaccaatagatgttgtaatacaa 49503747  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaa 172  Q
    | ||||||| ||||||||| |||||  ||||||| | ||||||||| |||||||||    
T  49503746 acagtagatcagatggaggggagtctgattagaagatgtagaggaagacctagaaa 49503691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 22063 - 22308
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||| ||   |||| |||||||| ||||| |||||||||||  ||||||  ||||||       
T  22063 agagagagtgggggtagcacctatagtagaaaagttggtagaaa-taggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaaga 22161  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||||||||||||  ||| || ||||||||||| || ||  |||||||  |||||||| ||||||||  ||||||||||  || |||    
T  22162 agagtagattaaatggaggagagtcgggttaaaagaggtagaggaagacttaagaaaaccattagagaaaccattagaaaggatttagaggtcaatgagt 22261  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    || || ||||||| ||||| ||||||||| |||| ||| ||||||||    
T  22262 tggatccaaatatggtttttgatagaacactatggcgtcatttgatc 22308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 35033136 - 35033385
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||  |||||||| ||||| |||||||||||  ||||||   |||||       
T  35033136 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagacccgtagatgccattgtaaga 35033235  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||||| || | |||||||||||||   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  35033236 agagtaaatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 35033335  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| ||||||||| |||| ||| |||||||||||    
T  35033336 tggatccaaatatggtttttgatagaacactatggcgttatttgatccat 35033385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 50960922 - 50960680
Alignment:
Q  20 gagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagaga 119  Q
    |||||||||||||| | ||| ||||||||||||| || ||||||   ||||||||||||||||||| |||||||||||     ||||||| | |   |||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacc----tatgttgtagaaagaaga 50960827  T
Q  120 gtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttga 219  Q
    |||||| |||||||||||||||| ||   || ||| ||||||| |||||||||||    ||||||||||||||| |||  ||||||| || || |||||     
T  50960826 gtagatcagatggaggagagtcggatcgaaagagggagaggaagacctagaaaaaatttaagagaaactattaggaaaggtttagagattaatgagttgg 50960727  T
Q  220 atacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || ||||||| || |   ||||| |||||||  ||||||||||||||    
T  50960726 atccaaatatggtgtatcatagaccattatggtgtaatttgatccat 50960680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 52138790 - 52139039
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  52138790 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacctgtagatgccgtggtaaga 52138889  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||| ||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  52138890 agaatagattaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 52138989  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||||| |||||||||||    
T  52138990 tggatccaaatttggtgtatgatagaacactatgacgttatttgatccat 52139039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 45289385 - 45289134
Alignment:
Q  17 agagagagttggggtagtagcta--cagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtac 114  Q
    ||||||||||||||||| | |||  |||||||||||||| |  ||||||   |||||||||||||||| || ||||||| ||   ||||| |||| |||     
T  45289385 agagagagttggggtagcacctattcagtagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaa 45289286  T
Q  115 agagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataa 214  Q
      ||||||||| |||||||||| |||   |||| || || |||||||| | |||  ||||| | ||||||||||||||| ||| |||||||| || || |    
T  45289285 gaagagtagatcagatggaggatagttagattacaagagatagaggaagatctatgaaaactataagagaaactattaggaaagatttagagattaatga 45289186  T
Q  215 gttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||| || ||||||| ||||  |||||||||||||  | |||||||||||||    
T  45289185 gttggatccaaatatggtttatgatagaacattatagcataatttgatccat 45289134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 5168822 - 5169071
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | |||  ||||||||| || || ||||||   |||| |||||||  ||||| |||||||||||  ||||||  |||||        
T  5168822 agagagagtgggggtagcacctatggtagaaaagttggtagaaaatacgcttagatggtttgaacatgtagagagaagacccgtagatgccgttgttaga 5168921  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||  |||||||| ||||||||  ||||| ||||  || |||    
T  5168922 agagtagatcaaatggaggagagtctagttaaaagaggtagaggaagacctaagaaaaccattagagaaaccattagaaaggatttataggtcaatgagt 5169021  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| ||||||||| |||| ||| |||||||||||    
T  5169022 tggatccaaatatggtttttgatagaacactatggcgtcatttgatccat 5169071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 38430840 - 38431069
Alignment:
Q  19 agagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagag 118  Q
    |||| |||| ||||| | ||| ||||||||||||| || ||||||   |||||| | |||||||||| |||||| ||||   ||||||||| |||   ||    
T  38430840 agagcgttgaggtagcacctatagtagaaaagatggtagaaaataggcttaggttgattgggcatgtagagagacgacctgcagatgttgtagtatgaag 38430939  T
Q  119 agtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttg 218  Q
    ||||||| |||||||||||||||  || | || ||||||||||| || ||||||||| | |||||||||||||    ||  |||||||||| || |||||    
T  38430940 agtagatcagatggaggagagtcaaatcaaaagaggtagaggaagacttagaaaaactacaagagaaactattgtggaaggtttagaggttaatgagttg 38431039  T
Q  219 aatacaaatattgttttagatagaacatta 248  Q
     || ||||||| ||||  ||||||||||||    
T  38431040 gatccaaatatggtttatgatagaacatta 38431069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 28245427 - 28245676
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || |||||| | |||| |||||||||||||| ||||||| |||  ||||||  || |||       
T  28245427 agagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaaaacccgtagatgccgtggtaaga 28245526  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    |||||| || | |||||||||||||   ||| || ||||||| ||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  28245527 agagtatatcaaatggaggagagtcaagttaaaagaggtagatgaagacctaggaaaactattagagaaacgattagaaatgatttagaggtcaatgagt 28245626  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |   |||||||| |||||||| |||||||||||    
T  28245627 tggatccaaatttggtgtataatagaacactatgacgtcatttgatccat 28245676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 54279010 - 54279256
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   ||||  |||||||||| || |||||||||||  ||||||  || ||| |     
T  54279010 agagagagtaggggtagcacctatagtagaaaagttggtagaaaataggcttagacggtttgggcacgtagagagaagacccgtagatgccgtggtaaaa 54279109  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||| ||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  54279110 agagtagatcaaatggaggagagtcaagttaaaagaggtagaagaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 54279209  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    || || ||||| | || |  ||||||||| |||| ||| ||||||||    
T  54279210 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatc 54279256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 49042088 - 49042176
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgtttta-gatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||| ||| ||||||||||| || ||||| || ||||||| |||||| ||||||||| |||| |||||||||||||||    
T  49042088 aagagaaactattaggaaagatttagaggttaatgagttggatccaaatatggttttatgatagaacactatggcgtaatttgatccat 49042176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 19757889 - 19758047
Alignment:
Q  17 agagagagttggggt-agtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtaca 115  Q
    ||||||||||||||  || | ||| ||||||||||||| || ||||||   |||||||||||| |||||  |||||||||||  |||||||||| |||      
T  19757889 agagagagttgggggcagcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaag 19757988  T
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
     ||||||||| ||||||||||||||   || | || ||||||||||| ||||||||||||    
T  19757989 aagagtagatcagatggaggagagttagatca-aaaaggtagaggaagacctagaaaaac 19758047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 266
Target Start/End: Original strand, 38850134 - 38850360
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || |||||| | |||| |||||||||||||| ||||||||| |  |||| || || |||   |||||||||   ||||||||||||    
T  38850134 agtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaagatcagtagaggtcgtcgtaagaagagtagatcgaatggaggagagt 38850233  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaa-aatttagaggttgataagttgaatacaaatattgttttagat 239  Q
    |   |||||| ||||||||||| |||||| ||||  |  ||| |||| |||||||||  || |||| ||  || | |||||| ||||| | ||||  |||    
T  38850234 caagttagaagaggtagaggaagacctaggaaaattattagataaaccattagaaaaggatctagaagtcaatgaattgaattcaaatttggtttatgat 38850333  T
Q  240 agaacattatgacgtaatttgatccat 266  Q
    |||||| ||||||||||||||||||||    
T  38850334 agaacactatgacgtaatttgatccat 38850360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 19736986 - 19737110
Alignment:
Q  17 agagagagttggggt-agtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtaca 115  Q
    ||||||||||||||  || | ||| ||||||||||||| || ||||||   |||||||||||| |||||  |||||||||||  |||||||||| |||      
T  19736986 agagagagttgggggcagcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaag 19737085  T
Q  116 gagagtagataagatggaggagagt 140  Q
     ||||||||| ||||||||||||||    
T  19737086 aagagtagatcagatggaggagagt 19737110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 266
Target Start/End: Complemental strand, 48953690 - 48953462
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaa-gaccgatagatgttgttgtacagagagtagataagatggaggagag 139  Q
    |||||||||| || || |||||||| |||| || |||||||||||  |||||| ||||   ||||||||| |||   ||||||||| |||||||||||||    
T  48953690 agtagaaaagttggtagaaaataaacttagatgatttgggcatgtaaagagaaagacccgcagatgttgtcgtaagaagagtagatcagatggaggagag 48953591  T
Q  140 tcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaa--tttagaggttgataagttgaatacaaatattgttttag 237  Q
    |||  | | || | ||||||||| |||||| ||||| | ||||||||  |||| ||| ||  | || ||||  || ||||| || |||||||  |||  |    
T  48953590 tcgggtcaaaagaagtagaggaagacctaggaaaactataagagaaatcattaaaaagaacttataaaggtcaatgagttggatccaaatatgatttatg 48953491  T
Q  238 atagaacattatgacgtaatttgatccat 266  Q
    |||||||| ||||||||||||| ||||||    
T  48953490 atagaacactatgacgtaatttaatccat 48953462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 263
Target Start/End: Complemental strand, 33755535 - 33755390
Alignment:
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataag 215  Q
    |||||||||| ||||||||||  |||| || |  | ||| ||||||| |||||||||||| | ||||||||||||||| ||||| |||||| || || ||    
T  33755535 gagagtagatcagatggaggatggtcggatcactagaggcagaggaaaacctagaaaaactataagagaaactattaggaaaaacttagagattaatgag 33755436  T
Q  216 ttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    ||| |   | |||| ||||  ||  |||||||||||||||||||||||    
T  33755435 ttggaccaagatatggttt--gagtgaacattatgacgtaatttgatc 33755390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 3987037 - 3987116
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagac 96  Q
    ||||||||||||||||  | ||| ||||||||||||| || ||| || | |||||||||||||| |||| ||||||||||    
T  3987037 agagagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagac 3987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 11581434 - 11581513
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagac 96  Q
    |||||||||| |||||| | ||||| ||||||||||| || ||| || | |||||||||||||| |||| ||||||||||    
T  11581434 agagagagttagggtagaacctacaatagaaaagatggtagaaactagacttaggtggtttgggtatgtagagagaagac 11581513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 15296059 - 15296146
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||| ||| ||||||||||| || | ||| || |||||||  |||  ||||||||||||||  ||||||||||||||    
T  15296059 aagagaaactattaggaaagatttagaggttaatgaattggatccaaatatgatttcggatagaacattatggtgtaatttgatccat 15296146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 29601064 - 29601131
Alignment:
Q  199 atttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||||||| || || ||||| || ||||||| ||||  ||||||||||||||| ||||||||||||||    
T  29601064 atttagagattaatgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccat 29601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 39208804 - 39208847
Alignment:
Q  223 caaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||    
T  39208804 caaatatggtttatgatagaacattatgacgtaatttgatccat 39208847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 52679029 - 52678893
Alignment:
Q  128 gatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaat 227  Q
    |||||||||||||||  ||| || | ||||| ||| |||||| ||||| ||  ||||||||||||  ||| ||||||||||| || |||||||| |||||    
T  52679029 gatggaggagagtcgggttaaaagatgtagaagaagacctaggaaaactaa--gagaaactattatgaaagatttagaggttaatgagttgaattcaaat 52678932  T
Q  228 attgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||  ||   |||| || |||||  |||||||||||||||    
T  52678931 atgattcatgatataatattatagcgtaatttgatccat 52678893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 38060421 - 38060579
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| | |||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  || |||       
T  38060421 agagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtagatgccgtcgtaaga 38060520  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
    ||||||||| | |||||||||||||   ||| || ||||||||| | |||||| |||||    
T  38060521 agagtagattaaatggaggagagtcaggttaaaaaaggtagagggagacctaggaaaac 38060579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 48734436 - 48734310
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| |||||| ||||||||||    || ||||||| ||||| || ||||||   ||||||||||||||||||| ||||||||| |  |||| | |    
T  48734436 gacaccattagagagtgttggggtagcgcgtatagtagaacagatggtagaaaataggcttaggtggtttgggcatgtagagagaagaactgtagaggct 48734337  T
Q  108 gttgtacagagagtagataagatggag 134  Q
    || ||||  ||||||||| ||||||||    
T  48734336 gtagtacgaagagtagatcagatggag 48734310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 53519737 - 53519819
Alignment:
Q  184 aaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||| |||| |||| ||||||||||  || ||||| || ||||||  ||||| ||||||||| |||||||| |||||||||||    
T  53519737 aaaccattaaaaaagatttagaggtcaatgagttggatccaaataaggtttttgatagaacactatgacgtcatttgatccat 53519819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 21200539 - 21200617
Alignment:
Q  16 cagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagac 96  Q
    |||||||| ||||||||| | |||  |||||||||||| |  ||| || | ||||||||||||||||||| ||||||||||    
T  21200539 cagagagaattggggtagcaccta--gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagac 21200617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 27917560 - 27917745
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||| ||||||||||| | ||| ||||||||||||| ||  |||||   |||| |||||||| ||||| || |||||||   ||||||||||  || |     
T  27917560 agagaaagttggggtagcacctatagtagaaaagatggtaggaaataggcttagatggtttggacatgtagaaagaagacttgtagatgttgtattagaa 27917659  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaattt 202  Q
    ||| ||||| | |||||||| | ||  || | |||||||||| ||| ||||| |||||| | |||||| || | ||||||| ||||    
T  27917660 agaatagatcaaatggaggacaatcagatcataataggtagacgaagacctataaaaactataagagagacaactagaaaagattt 27917745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 40116619 - 40116514
Alignment:
Q  158 aggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaat 257  Q
    ||||| |||||||||||| | ||||||||||||||| | | |||||||| || || ||||| |   |||||| ||||  ||||||||||| || ||||||    
T  40116619 aggaagacctagaaaaactataagagaaactattaggatagatttagagattaatgagttggaccgaaatatggtttatgatagaacattgtggcgtaat 40116520  T
Q  258 ttgatc 263  Q
    | ||||    
T  40116519 tcgatc 40116514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 8e-32; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 51421711 - 51421969
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| |||||| |||||||||| |  || ||||||  |||||||| ||||||   ||||||||||||||||| |  ||||||||||| ||||||||    
T  51421711 gacaccattagagagtgttggggtagcacatatagtagattagatgatagaaaataggcttaggtggtttgggcatatacagagaagaccggtagatgtt 51421810  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    ||  |||  ||||||||| | |||||||   |||  || | || ||||||||||| |  ||||||||| | ||||||||||||||| ||| |||||||||    
T  51421811 gtaatacgaagagtagatcaaatggaggtttgtcagatcaaaagaggtagaggaagatttagaaaaactataagagaaactattaggaaagatttagagg 51421910  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || | ||| || |||| || ||||  ||||||||||||||||||||||||||||||    
T  51421911 ttaatgaattggatccaaaaatggtttatgatagaacattatgacgtaatttgatccat 51421969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 31960106 - 31959857
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  31960106 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 31960007  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||||||||||||  ||||||||||  || |||    
T  31960006 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaactattagaaaggatttagaggtcaatgagt 31959907  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  31959906 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 31959857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 26037697 - 26037548
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| |||||||||||||||   ||| || ||| ||||||| |||||| ||||||| ||||||||||||||| ||| ||||||||||  || |||    
T  26037697 agagtagatcagatggaggagagtcaggttaaaagaggcagaggaaaacctaggaaaaccataagagaaactattaggaaagatttagaggtgaatgagt 26037598  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||| |||| ||||||| |||||||    
T  26037597 tggatccaaatatggtttatgatagaacactatggcgtaattggatccat 26037548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 271
Target Start/End: Original strand, 39708473 - 39708677
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| ||||||| ||||||  |||||||||  |||||||  || |||   ||||||||| |||||||||||||||   | | || ||||||||||| |||    
T  39708473 ttagatggtttgagcatgtatagagaagacacatagatgccgtcgtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacc 39708572  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| ||||| | ||||||||| ||||||||  ||||||||||  || ||||| || ||||||| ||||  ||||||||| |||| |||||||||||||||    
T  39708573 taggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatgtcgtaatttgatccat 39708672  T
Q  267 atagt 271  Q
     ||||    
T  39708673 gtagt 39708677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 100 - 263
Target Start/End: Complemental strand, 45205047 - 45204886
Alignment:
Q  100 tagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaa 199  Q
    |||||| ||||||||  ||||||||| |||||||||||||  | || | || |||| |||||| |||||||||||| | ||||||||||||||| ||| |    
T  45205047 tagatgatgttgtacgaagagtagatcagatggaggagagcag-atcaaaagaggtggaggaagacctagaaaaactataagagaaactattaggaaaga 45204949  T
Q  200 tttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    ||||||| || |||||||| || ||||||| ||||  |||||||||||| | ||||||||||||    
T  45204948 tttagagtttaataagttggatccaaatatggtttatgatagaacatta-ggcgtaatttgatc 45204886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 4440843 - 4441092
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| |||| || | ||| |||||||||| || || ||||||   |||| |||||||||||| | |||||||||||  |||||| ||| |||       
T  4440843 agagagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaaga 4440942  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  4440943 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 4441042  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  4441043 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 4441092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 53518562 - 53518366
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||||||||||||| |||| |||||||||||  | |||| ||| ||||  ||||||||| ||||||||   ||||  || |||| |||||||||||  ||    
T  53518562 ttaggtggtttgggtatgtagagagaagacctgtggatgctgtagtacgaagagtagatcagatggag---agtcaaatcagaagaggtagaggaaggcc 53518466  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| |  ||| |||||| ||| ||| ||||||||||| || ||||| ||  |||||| ||||  ||||||||| |||| |||||||||||||||    
T  53518465 tagaaaaactatgagaaaaactaataggaaagatttagaggttaatgagttggatctaaatatggtttatgatagaacactatggcgtaatttgatccat 53518366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 56375280 - 56375529
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| | |||||||| || || |||| |   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  56375280 agagagagtaggggtagcacctataatagaaaagttggtagaaaacaggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 56375379  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||||| |||||||||||||   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  56375380 agagtagataaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtgaatgagt 56375479  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||||| |||||||||||    
T  56375480 tggatccaaatttggtgtatgatagaacactatgacgtcatttgatccat 56375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 436219 - 436468
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| || ||||||||||| |||||||||||  ||||||  || |||       
T  436219 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacctgtagatgccgtggtaaga 436318  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| | ||||||  ||||||||||  || |||    
T  436319 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccactagaaaggatttagaggtcaatgagt 436418  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||| ||||| | || |  ||||||||| |||| | | |||||||||||    
T  436419 tgaatccaaatttggtgtatgatagaacactatggcatcatttgatccat 436468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 33191140 - 33190891
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || |||||| | |||| | |||||||||||| |||||||||||  ||||||  ||  ||       
T  33191140 agagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagacccgtagatgccgtgttaaga 33191041  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    || |||||| | |||||| ||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  33191040 agggtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 33190941  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||| ||||| | || |  ||||||||| |||||||| |||||| ||||    
T  33190940 tgaatccaaatttggtgtatgatagaacactatgacgtcatttgacccat 33190891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 35690361 - 35690510
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||| ||| |||||||||| ||||  || | || ||||||||||| |||||||||||| | ||||||||||||||  ||||||||||||||| || |||    
T  35690361 agagtggattagatggaggaaagtcagatcaaaagaggtagaggaagacctagaaaaactataagagaaactattacgaaaaatttagaggttaatgagt 35690460  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || |||  |  ||||  |||||||||||||| |||||||||||||||    
T  35690461 ttgatccaatcagggtttatgatagaacattatggcgtaatttgatccat 35690510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 52569807 - 52569558
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  52569807 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 52569708  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  ||||| |  | |||||| ||||||||  ||||||||||  || |||    
T  52569707 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctacgaaaactattaaagaaaccattagaaaggatttagaggtcaatgagt 52569608  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  52569607 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 52569558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 20591591 - 20591321
Alignment:
Q  18 gagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacaga 117  Q
    |||||||| ||||||| |  || |||||||||| || || |||||||  |||| |||||||||||||| ||||||||||  |||||||| | ||||   |    
T  20591591 gagagagtgggggtagcacttatagtagaaaagttggtagaaaataagattagatggtttgggcatgtagagagaagactcatagatgtcg-tgtaagaa 20591493  T
Q  118 gagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagtt 217  Q
    ||||| || |||||||||||||||     || | ||||||||||| |||||  ||||| | ||||||  | ||||||||  ||||||||||  || ||||    
T  20591492 gagtatatcagatggaggagagtc----aagtagaggtagaggaagacctaagaaaactataagagaccccattagaaaggatttagaggtcaatgagtt 20591397  T
Q  218 gaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagttgattctgtttagtaggataaga 294  Q
    | || ||||||| ||| | |||||||||  ||||||||||||||| |||||| | ||  || |||||| ||||||||    
T  20591396 ggattcaaatatggttat-gatagaacacaatgacgtaatttgattcatatattcgaccctttttagtgggataaga 20591321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 39100836 - 39100579
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| || ||||||| ||||| ||||||   |||| |||||||  ||||| ||||||||| |  ||||||      
T  39100836 gacaccattagagagagtgggggtagcacctatagaagaaaagttgatagaaaataggcttagatggtttgaacatgtagagagaagatccgtagatgc- 39100738  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    ||||||   ||||||||| ||||||| || ||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  |||| ||||    
T  39100737 gttgtaagaagagtagatcagatggaagatagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttggagg 39100638  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||| || ||||||||||||   ||||||||||||| |||||| | ||||||    
T  39100637 tcaatgagttggatccaaatattgtttatcatagaacattatggcgtaatataatccat 39100579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 48174385 - 48174136
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||  | ||| |||||||||| || || ||||||   |||| || ||||||||||| |||||||||||  ||||||  || |||       
T  48174385 agagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccgtagatgccgtggtaaga 48174286  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  48174285 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 48174186  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  |||| ||||||||| ||| |||||||||||    
T  48174185 tggatccaaatttggtgtatgataaaacattatggcgtcatttgatccat 48174136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 271
Target Start/End: Original strand, 53707786 - 53708038
Alignment:
Q  19 agagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagag 118  Q
    ||||||| | ||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||   ||    
T  53707786 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 53707885  T
Q  119 agtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttg 218  Q
    |||| || | |||||||| ||||   ||| || ||||||||||| ||| || ||||| |  |||||||| ||||||||  ||||||||||  || |||||    
T  53707886 agtatatcaaatggaggatagtcaagttaaaagaggtagaggaagaccgaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 53707985  T
Q  219 aatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
     || ||||| | || |  ||||||||| |||||||| ||||||||||| ||||    
T  53707986 gatccaaatttggtgtatgatagaacactatgacgtcatttgatccatttagt 53708038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 1777259 - 1777060
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||| ||| | ||||||||||  |||||||  || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||    
T  1777259 ttagatggtttggacatctagagagaagactcatagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacc 1777160  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| ||||| |  |||||||| ||||||||| ||||||||||  || ||||| || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  1777159 taggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacagtatggcgtcatttgatccat 1777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 20192025 - 20192214
Alignment:
Q  19 agagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagag 118  Q
    ||||||| ||||||| |  || |||||||||| ||||| |||||||  |||| | |||||||||||| |||||||||||  |||||| ||| |||   ||    
T  20192025 agagagtgggggtagcacttatagtagaaaagttgatagaaaataagcttagatagtttgggcatgtagagagaagacccgtagatgctgtggtaagaag 20192124  T
Q  119 agtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    |||| || | |||||||||||||   ||| || |||||| |||| ||||  |||||| |  |||||||| ||||||||  ||||||||||    
T  20192125 agtatatcaaatggaggagagtcaagttaaaagaggtagtggaagacctgaaaaaactattagagaaaccattagaaaggatttagaggt 20192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 33227199 - 33227448
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| | |||||||||||| |||||||||||  ||||||  ||  ||       
T  33227199 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagattgtttgggcatgtagagagaagacccgtagatgccgtgttaaga 33227298  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||| |||||||   ||| || ||||||| ||| |||||| ||||| |  ||| |||| ||||||||  ||||||||||  || |||    
T  33227299 agagtagatcaaatggaagagagtcaagttaaaagaggtagatgaagacctaggaaaactattagaaaaaccattagaaaggatttagaggtcaatgagt 33227398  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||||| |||||||||||    
T  33227399 tggatccaaatttggtgtatgatagaacactatgacgtcatttgatccat 33227448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 47611741 - 47611841
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||||||||  ||||||   ||||||||||||||||||| ||||||||||| | |||| ||||  ||  ||||||| || ||||||||||||||    
T  47611741 agtagaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaagacctagagattttgtaataaggagagtaaatcagatggaggagagt 47611840  T
Q  141 c 141  Q
    |    
T  47611841 c 47611841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 266
Target Start/End: Original strand, 32479078 - 32479277
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||| ||||| ||||| |||||  |||| |  ||||||   ||||||||| | ||||||||||| |   ||  || ||||||||||| |||    
T  32479078 ttagatggtttggacatgtagagaggagacctgtagaggccgttgtaagaagagtagatcaaatggaggagagacaggttgaaagaggtagaggaagacc 32479177  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||  |||||||   ||||||| ||||||||| ||||||||||  || ||||| ||  |||||| ||||| ||||||||| |||| ||| |||||||||||    
T  32479178 taagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggatcaaaatatggtttttgatagaacactatggcgtcatttgatccat 32479277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 35555939 - 35555764
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||| |||||| | ||| ||||||||||||| || ||| || | ||||||||||||||||| | |||||||||||  | |||  ||| ||   |    
T  35555939 agagagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagttagg 35555840  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactatta 192  Q
    ||||||||| |||| ||||||||| |  | |  | |||||| || | |||||||||||| | ||||||||||||||    
T  35555839 agagtagattagatagaggagagttgggtcactagaggtaggggtagacctagaaaaactataagagaaactatta 35555764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 43433914 - 43434105
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  43433914 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 43434013  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    |||||| || | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| |||  |||  ||||||||||    
T  43434014 agagtaaatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattgaaaatgatttagaggt 43434105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 8286564 - 8286678
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| | ||||  ||||||||| |||||    
T  8286564 aggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatga 8286663  T
Q  252 cgtaatttgatccat 266  Q
    ||| |||||||||||    
T  8286664 cgtcatttgatccat 8286678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 10209026 - 10209148
Alignment:
Q  19 agagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagag 118  Q
    ||||||||||||||| | ||| |||||||||||||  | ||| |||| |||| |||||||||||||| | |||||||||  |  || || | |||  |||    
T  10209026 agagagttggggtagaacctatagtagaaaagatggcagaaactaaacttagttggtttgggcatgtagcgagaagacctgtgaattttttagtaaggag 10209125  T
Q  119 agtagataagatggaggagagtc 141  Q
    ||||||| |||||||||||||||    
T  10209126 agtagatcagatggaggagagtc 10209148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 16003054 - 16003168
Alignment:
Q  155 tagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgt 254  Q
    ||||||||||||   |||||| | ||||||||| ||||||||||||||||||||  || ||||| ||  ||||||  |||  |||| |||| ||||||||    
T  16003054 tagaggaataccgtaaaaaactataagagaaaccattagaaaaaatttagaggtcaatgagttggatctaaatatgatttatgataaaacactatgacgt 16003153  T
Q  255 aatttgatccatata 269  Q
    ||||| |||||||||    
T  16003154 aatttaatccatata 16003168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 23906587 - 23906340
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| |  || ||||||   |||| ||||||| |||||| ||||||||||   ||||||  || |||       
T  23906587 agagagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatggtttgagcatgtagagagaagacg--tagatgccgtggtaaga 23906490  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||| | ||| |||||||||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  23906489 agagtagattaaatggaggagagtcaagttaaaaaaggtaaatgaagacctagaaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 23906390  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  23906389 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 23906340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 27450480 - 27450223
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||| | ||||| |||||||||||  ||||||      
T  27450480 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttttgacatgtagagagaagacccgtagatgcc 27450381  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    ||||||   ||||||||| | |||||| ||| ||   ||| || ||||| ||||| |||||  |||| ||   ||||||| ||| ||||| |||||||||    
T  27450380 gttgtaagaagagtagatcaaatggagtagaatcaggttaaaagaggtaaaggaagacctaagaaaatcattcgagaaaccattggaaaagatttagagg 27450281  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||| || |||||| || ||| ||||||||| |||| ||| |||||||||||    
T  27450280 tcaatgagttggatccaaata-tgattttgatagaacactatggcgtcatttgatccat 27450223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 28351648 - 28351738
Alignment:
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagag 206  Q
    |||||||||| |||||||||| ||||  |||| || |||||||| || |||||||||||| | ||||||||||||||  ||| ||||||||    
T  28351648 gagagtagatcagatggaggatagtcagattacaagaggtagagaaagacctagaaaaactataagagaaactattacgaaagatttagag 28351738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 53540419 - 53540533
Alignment:
Q  156 agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgta 255  Q
    ||||||| |||||||||||| | |||| |||||||||| ||| | || ||| || || ||||| | | |||||| ||||  |||||||||||||| | ||    
T  53540419 agaggaagacctagaaaaactataagataaactattaggaaagacttggagattaatgagttggacaaaaatatggtttatgatagaacattatggcata 53540518  T
Q  256 atttgatccatatag 270  Q
    |||||||||||||||    
T  53540519 atttgatccatatag 53540533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 1211627 - 1211498
Alignment:
Q  72 tggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaa 171  Q
    ||||||||| |||| ||||||||||| |||||| |||| |||   ||||||||| |||||||| ||||||| || | || || |||||||| || ||| |    
T  1211627 tggtttgggaatgtagagagaagacctatagatattgtcgtaagaagagtagatcagatggagtagagtcggatcaaaagagatagaggaagacatagga 1211528  T
Q  172 aaaccaaaagagaaactattagaaaaaatt 201  Q
     ||| | |||| ||| ||||||||||||||    
T  1211527 gaactataagataaattattagaaaaaatt 1211498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 31043201 - 31043309
Alignment:
Q  156 agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgta 255  Q
    ||||||| ||| ||| |||| ||||||||||||||||| ||| |||||||| || || ||||| || ||||||| ||||  ||||||||| |||  | ||    
T  31043201 agaggaagacccagataaactaaaagagaaactattaggaaagatttagagattaatgagttggatccaaatatggtttgtgatagaacactattgcata 31043300  T
Q  256 atttgatcc 264  Q
    |||||||||    
T  31043301 atttgatcc 31043309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 41192826 - 41192906
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||||||||||||||| | ||||||||||||||||| |  ||| || | ||||||| |||| |||||| |||||||||||    
T  41192826 agagagagttggggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacc 41192906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 48622844 - 48622644
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | | | |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  || |||      
T  48622844 gacaccattagagagagtgggggtagcacccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtaaatgcc 48622745  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    || |||   | || |||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||  ||||||||| |||||||||    
T  48622744 gtggtaagaaaagaagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaatcattagaaaagatttagagg 48622645  T
Q  208 t 208  Q
    |    
T  48622644 t 48622644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 50679594 - 50679685
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||| | |||||||||||||   |||||| ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||    
T  50679594 agagtagattaaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggt 50679685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 54470197 - 54470276
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagac 96  Q
    ||||||||||||||||| | ||| ||||||||||||| |  ||| || | ||| ||||||||||||||| ||||||||||    
T  54470197 agagagagttggggtagcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagac 54470276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 40420342 - 40420235
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagttgattct 278  Q
    |||||||||||||| |||||||  |||| || || |||||||| | ||||| ||||  |||||||||||| ||||||||||||| ||| | || ||| ||    
T  40420342 aagagaaactattaaaaaaaat--agagattaatgagttgaatcctaatatggtttatgatagaacattacgacgtaatttgatacatgttgtcgatcct 40420245  T
Q  279 gtttagtagg 288  Q
     |||||||||    
T  40420244 atttagtagg 40420235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 55809147 - 55809081
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttg 218  Q
    ||||||||||| |||||||||||| | |||||||||| |||| ||| ||||||||||| || |||||    
T  55809147 aggtagaggaagacctagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttg 55809081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 36198934 - 36199054
Alignment:
Q  145 ttagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaac 244  Q
    |||||| ||||| || ||||||||||||||| | |||| |||  ||||||||| |||||||||||  | ||||  || ||||||| |||| | ||| |||    
T  36198934 ttagaaaaggtaaagaaatacctagaaaaactataagaaaaaa-attagaaaagatttagaggttattgagtttgattcaaatatggtttcaaataaaac 36199032  T
Q  245 attatgacgtaatttgatccat 266  Q
    ||||||||| || |||||||||    
T  36199033 attatgacgaaacttgatccat 36199054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 141
Target Start/End: Complemental strand, 20601914 - 20601814
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || ||||||   |||| ||||||| |||||| |||||||||||  ||||||  ||||||   |||||| |||||||||||||||||    
T  20601914 agtagaaaagttggtagaaaataggattagatggtttgtgcatgtagagagaagacctgtagatgccgttgtaagaagagtatataagatggaggagagt 20601815  T
Q  141 c 141  Q
    |    
T  20601814 c 20601814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 42285976 - 42285912
Alignment:
Q  33 gtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||||| ||||||||||||| || ||| || | |||||||||||||||||||  ||||||||||    
T  42285976 gtagctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtatagagaagacc 42285912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 21528416 - 21528527
Alignment:
Q  155 tagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgt 254  Q
    |||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || ||||| || ||||||| ||||| ||||||||| ||||  |     
T  21528416 tagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggattcaaatatggtttttgatagaacactatggtgg 21528515  T
Q  255 aatttgatccat 266  Q
     |||||||||||    
T  21528516 catttgatccat 21528527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 25257882 - 25257755
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||||| ||||  | ||||| || |||||||| || ||  || | |||||||||||| |||||| |||||||||||  |  ||| |    
T  25257882 gacaacattagagagagttgaggtaacacctacaatataaaagatggtagaagctagacttaggtggtttgagcatgtagagagaagacctgtgaatgct 25257783  T
Q  108 gttgtacagagagtagataagatggagg 135  Q
    ||||||  |||||||||| |||||||||    
T  25257782 gttgtaaggagagtagatcagatggagg 25257755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 250
Target Start/End: Complemental strand, 42639262 - 42639079
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||||| ||||| ||||||||||  || |||  ||| |||  | | ||| || ||||||||| |||||  || |  | ||||||||||||| |    
T  42639262 ttaggtggtttggacatgtagagagaagacttatggattctgtggtaaggggggtaaattagatggaggggagtcaaatcactagaggtagaggaatatc 42639163  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatg 250  Q
    |||||||||   ||||||||||||||  ||| || ||| | || || ||||| ||| |||||| || || ||||||||||||||    
T  42639162 tagaaaaactgcaagagaaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatg 42639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 44360077 - 44360155
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagac 96  Q
    ||||||||||||||||  | ||| ||||||||||||| || ||| || | |||||| |||||||||||| ||||||||||    
T  44360077 agagagagttggggtatcacctatagtagaaaagatggtagaaactaga-ttaggttgtttgggcatgtagagagaagac 44360155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 262
Target Start/End: Original strand, 21236951 - 21237093
Alignment:
Q  120 gtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttga 219  Q
    |||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||||     
T  21236951 gtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttgg 21237050  T
Q  220 atacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    || ||||| | || |  ||||||||| |||| ||| |||||||    
T  21237051 atccaaatttggtatatgatagaacactatggcgtcatttgat 21237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 266
Target Start/End: Original strand, 3979130 - 3979159
Alignment:
Q  237 gatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||||||||||||||||||    
T  3979130 gatagaacattatgacgtaatttgatccat 3979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 28497529 - 28497598
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggagga 136  Q
    ||||||||||||||||||| ||||||||||   |||||  ||| |||  |||||||||| ||||||||||    
T  28497529 ttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggagagtagatcagatggagga 28497598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 29182498 - 29182559
Alignment:
Q  43 tagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagat 104  Q
    ||||||||||| |||||| |||  ||||||||||| ||||||| ||||||| |||| |||||    
T  29182498 tagaaaagatgctacaaactaagcttaggtggtttaggcatgtagagagaaaaccggtagat 29182559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 56225047 - 56225180
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||| ||||||| || || ||| |||| |||||||| || ||||||   |||||||||||| | |||| ||||||||    |||||||||    
T  56225047 gacaccataagagaaagttgggataatacctatagtataaaagatggtagaaaataggcttaggtggtttgagtatgtagagagaaggaacatagatgtt 56225146  T
Q  108 gttgtacagagagtagataagatggaggagagtc 141  Q
    || ||||  |||||| || | |||||||||||||    
T  56225147 gtagtacgtagagtatatcatatggaggagagtc 56225180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 6957726 - 6957837
Alignment:
Q  155 tagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgtttta-gatagaacattatgacg 253  Q
    |||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| ||| | || ||||||||| |||||||    
T  6957726 tagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaat-ttgatgtatgatagaacactatgacg 6957824  T
Q  254 taatttgatccat 266  Q
    | |||||||||||    
T  6957825 tcatttgatccat 6957837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 141
Target Start/End: Complemental strand, 7092488 - 7092388
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    ||||||||| |||||| ||||||   ||| ||||||||||||| | ||||||||||   |||||||| | |||   ||||||||| ||||||| ||||||    
T  7092488 agtagaaaatatgatagaaaataggtttaagtggtttgggcatatagagagaagacatgtagatgttatagtatgaagagtagatcagatggatgagagt 7092389  T
Q  141 c 141  Q
    |    
T  7092388 c 7092388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 21107124 - 21107228
Alignment:
Q  159 ggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatt 258  Q
    |||| |||||||||||| | ||||||||||||||| |||  ||||| | || || ||||| || ||||||| ||||  |||||||| ||||| | || ||    
T  21107124 ggaagacctagaaaaactataagagaaactattaggaaagttttagtgattaattagttggatccaaatatggtttatgatagaactttatggcttagtt 21107223  T
Q  259 tgatc 263  Q
    |||||    
T  21107224 tgatc 21107228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 28236164 - 28236252
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagac 96  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || |  ||||||   |||| |||||||||||||| ||||||||||    
T  28236164 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagac 28236252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 28550585 - 28550521
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaa 243  Q
    ||||||||||||||| ||| ||||||||||| || ||||  || ||||||| ||||| |||||||    
T  28550585 aagagaaactattaggaaagatttagaggttaatgagtttgatccaaatatggtttttgatagaa 28550521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 42566332 - 42566404
Alignment:
Q  120 gtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactatta 192  Q
    |||||| ||||| ||||||||| ||| |  | |||| |||||||||||| |||||| | ||||||||||||||    
T  42566332 gtagattagatgtaggagagtcatatcactagaggttgaggaatacctaaaaaaactacaagagaaactatta 42566404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 47265352 - 47265296
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||||| |||||| ||||| |  |||||||| |||||||| |||||||||||    
T  47265352 aggtagaggaagacctaggaaaactattagagaaaccattagaaagaatttagaggt 47265296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 9593974 - 9593749
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    ||||||||||||| || ||||||   ||||||||||||||||||| ||||||||||   |||||| ||| |||   ||||||||| ||||||||||||||    
T  9593974 agtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagt 9593875  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagata 240  Q
    |  || |  | ||||||||||| |||||||||||  | ||||||||||||||| ||| | |||||| || || ||||| || | ||||| ||||  ||||    
T  9593874 caaatca--agaggtagaggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggatcccaatatggtttatgata 9593777  T
Q  241 gaacattatgacgtaatttgatccatatag 270  Q
    ||||||||||  ||||||||||||||||||    
T  9593776 gaacattatg--gtaatttgatccatatag 9593749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 5095927 - 5096070
Alignment:
Q  120 gtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttga 219  Q
    |||||| ||||||| ||||||   || |||| ||||||||||| |||||||||||| | |||||||||| |||| ||| |||||| |||| || |||||     
T  5095927 gtagatcagatggaagagagttagatcagaagaggtagaggaagacctagaaaaactagaagagaaactcttaggaaagatttagtggttaatgagttgg 5096026  T
Q  220 atacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    ||  |||||| ||||  |||||||||||||| ||||||||||||    
T  5096027 atcaaaatatggtttatgatagaacattatggcgtaatttgatc 5096070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 30031246 - 30031495
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||| |||| ||||||| | ||| |||||||||| || || ||||||   |||| ||  |||| ||||| ||||||||||| |||||||  || |||       
T  30031246 agagggagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgagttggacatgtagagagaagacccatagatgccgtcgtaaga 30031345  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||| | |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  30031346 agagtagatcaaatggaggagagtcaggttaaaagaggtagagggagacctaggaaaactattagagaaacaattagaaaggatttagaggtcaatgagt 30031445  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || ||  |||||| ||||  ||||||||| |||| |||||||||||||||    
T  30031446 tggatttaaatatggtttatgatagaacactatggcgtaatttgatccat 30031495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 262
Target Start/End: Complemental strand, 6056009 - 6055818
Alignment:
Q  71 gtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctaga 170  Q
    |||||||| |||||| |||||||||    |||||||||| || || | ||||||| ||||||| |||||||  || | || ||||||||||| ||||| |    
T  6056009 gtggtttgagcatgtagagagaagagttgtagatgttgtagtgcaaatagtagatcagatggaagagagtcaaataaaaaaaggtagaggaagacctata 6055910  T
Q  171 aaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    |||||   ||||||||||||||  ||| ||||||||||| || ||||  || ||||||| || |   ||||||||||| |||||||||||||    
T  6055909 aaaactttaagagaaactattatgaaagatttagaggttaatgagttagatccaaatatagtgtataatagaacattacgacgtaatttgat 6055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 32755911 - 32756160
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| ||| |||||||   |||||| ||  ||       
T  32755911 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgtagagggaagacccgaagatgtcgtaataaga 32756010  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || |||||||| || |||||| ||||| |  |||||||| ||||||||| ||||||||||  || |||    
T  32756011 agagtagatcaaatggaggagagtcaagttaaaagaggtagagaaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagt 32756110  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  32756111 tggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 32756160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 24665824 - 24666047
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt-gttgtacagagagtagataagatggaggagag 139  Q
    ||||||||| ||| || ||||||   ||||||||||||| ||||| |||||||||||  ||||| || || |||  |||||||||| ||||| || | ||    
T  24665824 agtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatcagatgaagcatag 24665923  T
Q  140 tcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagat 239  Q
    ||| || |  | ||| |||||||  | ||||| ||| | ||||||||||||||  ||| ||||||||||  || ||||| ||  |||||| ||||  |||    
T  24665924 tcggatcaccagaggcagaggaagtcatagaataactacaagagaaactattaagaaatatttagaggtcaatgagttggatcgaaatatggtttatgat 24666023  T
Q  240 agaacattatgacgtaatttgatc 263  Q
    ||||||||||||| ||||||||||    
T  24666024 agaacattatgacttaatttgatc 24666047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 21351994 - 21351880
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||  |||||||| |||||||| ||||||||| ||||||||||  || || || || |||||||  |||| ||||||||| |||||    
T  21351994 aggtagaggaagacctaagaaaaccaatagagaaaccattagaaaagatttagaggtcaatgagctggatccaaatatgatttttgatagaacactatga 21351895  T
Q  252 cgtaatttgatccat 266  Q
    ||| | |||||||||    
T  21351894 cgttaattgatccat 21351880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 5631812 - 5632061
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||  | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||   | |||       
T  5631812 agagagagtgggggtaacacctatagtagaaaagttggtagaaaatatgcttagatggtttggacatgtagagagaagacccgtagatgccttcgtaaga 5631911  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    | ||||||| | |||||||||||||  |||| || ||  | ||||| || ||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  5631912 atagtagatcaaatggaggagagtcagattaaaagagacaaaggaagacttaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 5632011  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| |||| |||| |||||||| |||||||||||    
T  5632012 tggatccaaatatggtttttgatataacactatgacgtcatttgatccat 5632061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 265
Target Start/End: Complemental strand, 5258440 - 5258192
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  |||||   ||||||       
T  5258440 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagattccgttgtaaga 5258341  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||||||||||| | ||| || |||||||| || |||||  |||||||   ||||||  |||||| || ||||||||||  || ||     
T  5258340 agagtagatcaaatggaggagagtcatgttaaaagaggtagagaaagacctaagaaaaccattcgagaaatcattagacaagatttagaggtcaatgagc 5258241  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatcca 265  Q
    |  || ||||||| ||||| |||  |||| |||| ||| ||||||||||    
T  5258240 tagatccaaatatggtttttgattaaacactatggcgtcatttgatcca 5258192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 12890665 - 12890814
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| ||||||||||||||    | | || ||||||| ||| |||||| ||||| | ||||||||| ||||||||  ||||||| ||  || |||    
T  12890665 agagtagatcagatggaggagagtaaggtcaaaagaggtagatgaagacctaggaaaactataagagaaaccattagaaaggatttagacgtcaatgagt 12890764  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||||| ||||  ||||||||| |||| |||||||||||||||    
T  12890765 tagatccaaatatggtttatgatagaacactatggcgtaatttgatccat 12890814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 28085366 - 28085615
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  || ||   || |||       
T  28085366 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtaaataaagtggtaaga 28085465  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||| ||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  28085466 agagtagatcaaatggagtagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 28085565  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| ||||  || |||||||||||    
T  28085566 tggatccaaatttggtgtatgatagaacactatggtgtcatttgatccat 28085615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 28027066 - 28026902
Alignment:
Q  70 ggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctag 169  Q
    |||||||||| ||||| |||| || |||  ||||||  || ||||  |||||| || |||||||||||||||  ||||||| ||||||||||| |||||     
T  28027066 ggtggtttggacatgtagagataacacctgtagatgcggtagtacgaagagtatatcagatggaggagagtcagattagaagaggtagaggaagacctaa 28026967  T
Q  170 aaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttt 234  Q
    |||||| | |||| |||| ||||  ||| ||||| ||||| || | ||| || ||||||| ||||    
T  28026966 aaaaactataagaaaaaccattatgaaagatttacaggttaatgatttgtattcaaatatggttt 28026902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 33084048 - 33084128
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||||||||||||||| | |||  |||||||||||| || ||| || | |||||||||||||| |||| |||||||||||    
T  33084048 agagagagttggggtagcacctatggtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagacc 33084128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 34658 - 34548
Alignment:
Q  156 agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgta 255  Q
    ||||||| |||||||||||| | ||||||||| ||||  ||| || || || || || ||||| ||  |||||| ||||  |||||||||||||| ||||    
T  34658 agaggaagacctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgta 34559  T
Q  256 atttgatccat 266  Q
    |||||||||||    
T  34558 atttgatccat 34548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 31818668 - 31818770
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||||||||| | ||||||||||||||| |||  ||| ||| || || ||||| ||  || ||| ||||  |||||||||||||| ||||||||||||    
T  31818668 acctagaaaaactataagagaaactattaggaaaggtttggagattaatgagttggatcaaagtatggtttatgatagaacattatgtcgtaatttgatc 31818767  T
Q  264 cat 266  Q
    |||    
T  31818768 cat 31818770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 608315 - 608400
Alignment:
Q  181 gagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||| ||||||||| |||||||| |  || ||||| || ||||||| ||||| ||||||| | |||||||| |||||||||||    
T  608315 gagaaaccattagaaaagatttagagttcaatgagttggatccaaatatggtttttgatagaatactatgacgtcatttgatccat 608400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 7133795 - 7133915
Alignment:
Q  76 ttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
    |||||||||| |||||||||||   |||||  || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| ||||||||||||    
T  7133795 ttgggcatgtagagagaagacccgaagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctagaaaaac 7133894  T
Q  176 caaaagagaaactattagaaa 196  Q
     |  |||||||| ||||||||    
T  7133895 tattagagaaaccattagaaa 7133915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 7136718 - 7136838
Alignment:
Q  76 ttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
    |||||||||| |||||||||||   |||||  || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| ||||||||||||    
T  7136718 ttgggcatgtagagagaagacccgaagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctagaaaaac 7136817  T
Q  176 caaaagagaaactattagaaa 196  Q
     |  |||||||| ||||||||    
T  7136818 tattagagaaaccattagaaa 7136838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 14389459 - 14389336
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||| ||||| | |||  |||||||||||| |  |||  ||| ||||||||||||| ||||| ||||||||||| |||||  |||| |||  |    
T  14389459 agagagagttgaggtagcacctatcgtagaaaagatggtggaaac-aaacttaggtggtttggacatgtagagagaagacctatagactttgtagtaagg 14389361  T
Q  117 agagtagataagatggaggagagtc 141  Q
    ||| ||||| |||||||||| ||||    
T  14389360 agaatagatcagatggaggatagtc 14389336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 33711266 - 33711190
Alignment:
Q  195 aaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
    ||||||||| ||||| |||||||| ||  |||||| || |  | |||||||| ||||||||||||||||||||||||    
T  33711266 aaaaatttacaggttaataagttggatttaaatatggtctcgggtagaacatgatgacgtaatttgatccatatagt 33711190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 10100160 - 10099993
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||| | |  || |||||||||| || || |||||||  |||| |||||||| ||||| ||||||||||   ||||||      
T  10100160 gacaccattagagagagtgggggtcgcacatatagtagaaaagttggtagaaaataagcttagatggtttggacatgtagagagaagactcgtagatgcc 10100061  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaac 175  Q
    ||||||   ||||||||| | ||| |||||||||   ||| || ||||||||||| |||||| |||||    
T  10100060 gttgtaagaagagtagatcaaatgaaggagagtcagtttaaaagaggtagaggaagacctaggaaaac 10099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 1748074 - 1747980
Alignment:
Q  180 agagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagttga 274  Q
    |||||||||| ||  |||||||||||| || || ||||| ||| |||||| || |  |||||||||||| |||||  |||||||||| |||||||    
T  1748074 agagaaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacattacgacgtcgtttgatccatgtagttga 1747980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 7513075 - 7513025
Alignment:
Q  224 aaatattgttttagatagaacattatgacgtaatttgatccatatagttga 274  Q
    |||||| ||||  ||||||||||||||||||||||||||| || |||||||    
T  7513075 aaatatggtttatgatagaacattatgacgtaatttgatctatgtagttga 7513025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 8364693 - 8364795
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    ||||| |||||| | ||||||||||||||  ||| |||||||  || |||||||| |   ||| || ||||  |||||||||||||| ||||||||||||    
T  8364693 acctaaaaaaactataagagaaactattaagaaagatttagaaattaataagttggactgaaacatggtttatgatagaacattatggcgtaatttgatc 8364792  T
Q  264 cat 266  Q
    |||    
T  8364793 cat 8364795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 30700463 - 30700426
Alignment:
Q  237 gatagaacattatgacgtaatttgatccatatagttga 274  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  30700463 gatagaatattatgacgtaatttgatctatatagttga 30700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 3206578 - 3206502
Alignment:
Q  190 ttagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||||||| ||||||||||  || ||||| || ||||||| |||||  |||||||| |||| ||| |||||||||||    
T  3206578 ttagaaaagatttagaggtcaatgagttggatccaaatatggtttttaatagaacactatggcgtcatttgatccat 3206502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 72 - 266
Target Start/End: Original strand, 29520695 - 29520888
Alignment:
Q  72 tggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaa 171  Q
    |||||||||||||| ||||||||||   ||||| |||| |||  |||||||||| |||||||||| ||||  || | || |||||||||||  |||||||    
T  29520695 tggtttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcacaagaggtagaggaag-cctagaa 29520793  T
Q  172 aaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||| | |||||||||| |||| ||  |||||||| || || ||||| || ||||||| ||||  |||||||||||||| |||||||||||||||    
T  29520794 aaactataagagaaactgttaggaacgatttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccat 29520888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 13589476 - 13589715
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||| |||||   ||| | ||||||| ||| || ||||||   ||||||||||||  ||||||||||||||||||||||||||||| ||||      
T  13589476 agagagagttgaggtagcgcctataatagaaaatatggtagaaaatatgattaggtggtttgaacatgttgagagaagaccgatagatgttgtagtacga 13589575  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||| | |       ||| ||||||| ||| || ||||||||| | ||||||||||||||||||| ||||| || || || |||    
T  13589576 agagtagattatatggaggacaat-------gaagaggtagatgaagacttagaaaaactataagagaaactattagaaaagatttaaagattaatgagt 13589668  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||  ||||||  ||||| |||||||| |||| || |||||||||    
T  13589669 tgaatcaaaatatgattttaaatagaacaatatggcgcaatttgatc 13589715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 43904907 - 43904708
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||| |||   ||| ||||| |||||||||| ||||  |||| || ||||| ||||| |||    
T  43904907 ttaggtggtttggacatgtagagagaagacctatagatgttgtagtaagaagaatagatcagatggaggatagtcaaattacaagaggtacaggaagacc 43904808  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||||| || | |||||||||  |||  | | |||||||| || || ||||| ||  |||||| ||||  |||||||||||||| |||||||||||||||    
T  43904807 tagaaatactataagagaaacggttatgagagatttagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccat 43904708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 45419218 - 45419474
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||| ||||||||| | ||| ||||||||||||| || |||||| | ||||||||||||||||||| |||| ||||||  |||| |      
T  45419218 gacaccattagagagaattggggtagcacctatagtagaaaagatggtataaaatagacttaggtggtttgggcatgtagagataagacctgtagagg-- 45419315  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
     | |||   ||||||||| |||||||||||||||  ||  ||| ||||||||||| |||||||||||| | ||||||||||||||| |||  |||| |      
T  45419316 ctagtatgaagagtagatcagatggaggagagtcagatctgaagaggtagaggaagacctagaaaaactataagagaaactattaggaaaggtttaaatc 45419415  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
     | || ||||  || ||||| | ||||  ||||||||||||||  ||||||||||||||    
T  45419416 ataatgagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccat 45419474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 42854246 - 42854047
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||| ||||| |||||||||||  ||||||  ||||||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||    
T  42854246 ttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacc 42854147  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||  |||||||   ||||||| ||||||||| ||||||||||  || ||||| || ||||||| ||||| |||| |||| |||| ||| |||||||||||    
T  42854146 taagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatataacactatggcgtcatttgatccat 42854047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 67 - 266
Target Start/End: Original strand, 30559733 - 30559932
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||||||||| | ||||||||||   ||||| |||| |||  || ||| ||| |||||||||| ||||| || |  | || |||| ||| ||     
T  30559733 ttaggtggtttgggcatttagagagaagacatgtagattttgtagtaaggacagtggatcagatggaggatagtcggatcactagagatagatgaagact 30559832  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || |||||| | |||||||||||| || ||| |||||||| || || ||||| || || |||| ||||  ||||||||||||||||||||||||||||||    
T  30559833 taaaaaaactataagagaaactatcaggaaagatttagagattaatgagttggatccatatatggtttatgatagaacattatgacgtaatttgatccat 30559932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 36545139 - 36545388
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||  | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  36545139 agagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 36545238  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||| ||||   ||| || | ||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  36545239 agagtagatcaaatggaggatagtcaagttaaaagacgtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 36545338  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||||| |||||||||||    
T  36545339 tggatccaaatttggtgtatgatagaacactatgacgtcatttgatccat 36545388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 36565533 - 36565284
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||| |||  ||||||  || |||       
T  36565533 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaatacccgtagatgccgtggtaaga 36565434  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    || |||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  36565433 agggtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 36565334  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  36565333 tggatccaaatttggtgtatgatagaacactatggcgttatttgatccat 36565284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 42469919 - 42469770
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  42469919 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 42469820  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| ||||||||| |||| ||| |||||||||||    
T  42469819 tggatccaaatatggtttttgatagaacactatggcgtcatttgatccat 42469770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 261
Target Start/End: Original strand, 39946851 - 39947091
Alignment:
Q  21 agagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagag 120  Q
    ||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| || ||||||||  ||||||  || |||   ||||    
T  39946851 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagacctgtagatgccgtcgtaagaagag 39946950  T
Q  121 tagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaa 220  Q
    ||||| | |||||||||| ||   |||||| ||||||||||  |||||||||||| |  |||||||| ||||||||| ||||||||||  || |||||||    
T  39946951 tagatcaaatggaggagactcaagttagaagaggtagaggacgacctagaaaaactattagagaaaccattagaaaagatttagaggtcaatgagttgaa 39947050  T
Q  221 tacaaatattgttttagatagaacattatgacgtaatttga 261  Q
    | ||||| | ||||  ||||||||  |||| ||| ||||||    
T  39947051 tccaaatttggtttatgatagaacgctatggcgtcatttga 39947091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 11523965 - 11523766
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||||||||| |||||||||||  ||||||  || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||    
T  11523965 ttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacc 11523866  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  11523865 taggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 11523766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 40813314 - 40813563
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||||| |  ||||||  || |||       
T  40813314 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagatctgtagatgccgtggtaaga 40813413  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||   | |||    
T  40813414 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtcagtgagt 40813513  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||| | |||||||||||    
T  40813514 tggatccaaatttggtgtgtgatagaacactatgacatcatttgatccat 40813563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 266
Target Start/End: Original strand, 29700316 - 29700515
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||||||||| | |||| ||||||  | |||  ||| |||  |||||||||| |||||||||| |||| ||| |  | ||||||||||| |||    
T  29700316 ttaggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattagatggaggatagtcatatcactagaggtagaggaagacc 29700415  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| ||||||||||||| ||| ||| | || ||| |  || ||| | |   |||| ||||||  ||||||||||||||  ||||||||||||||    
T  29700416 tagaaaaactaaaagagaaactaataggaaagacttggagataaatgagtcggaccaaaattttgtttatgatagaacattatggtgtaatttgatccat 29700515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 42 - 266
Target Start/End: Original strand, 37077768 - 37077988
Alignment:
Q  42 gtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtc 141  Q
    ||||||||| || || |||||| | |||| |||||||||||||| |||||  |||| |||||||  || |||   ||||||||| | |||||||||||||    
T  37077768 gtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagag--gacccatagatgccgtcgtaagaagagtagatcaaatggaggagagtc 37077865  T
Q  142 gtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatag 241  Q
    |  | | |||||||||| ||| |||||| ||||  | ||||||||| ||||||||  ||||||||||  || ||||| || |||||| | |   ||||||    
T  37077866 gggtcaaaataggtagatgaagacctaggaaaattataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatactttggaagatag 37077965  T
Q  242 aacattatgacgtaatttgatccat 266  Q
    ||||   ||||||||||||||||||    
T  37077966 aaca--ctgacgtaatttgatccat 37077988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 262
Target Start/End: Original strand, 2796655 - 2796788
Alignment:
Q  129 atggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaata 228  Q
    ||||||||||||| | ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  || |||||||  |||||     
T  2796655 atggaggagagtcatgttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtcaattagttgaactcaaatt 2796754  T
Q  229 ttgttttagatagaacattatgacgtaatttgat 262  Q
    | ||||| ||||||||| |||| |||||||||||    
T  2796755 tggtttttgatagaacagtatggcgtaatttgat 2796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 490491 - 490574
Alignment:
Q  183 gaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||||||| || ||| |||||||| ||||| ||||| || ||||||| ||||  |||||||||||||| |||||||||||||||    
T  490491 gaaactataaggaaagatttagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccat 490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 8932683 - 8932942
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaaga-ccgatagatgt 106  Q
    |||| ||| ||||||||| ||||||| |  ||||||||||||| || || |||||| | |||| |||||||| ||||| || |||||| ||| || |||     
T  8932683 gacaccattagagagagtgggggtagcacatacagtagaaaagttggtagaaaatagatttagatggtttggacatgtagaaagaagatccgttaaatgc 8932782  T
Q  107 tgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagag 206  Q
      |||||   |||||| || | ||||| |||||||   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||| ||    
T  8932783 cattgtaagaagagtaaatcaaatggaagagagtcaagttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttaaag 8932882  T
Q  207 gttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| || ||||| ||  |||||| | ||| |||| |||| |||| ||| |||||||||||    
T  8932883 gttaatgagttggatcaaaatatggcttttgataaaacactatggcgtcatttgatccat 8932942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 18125154 - 18125348
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||  ||||| |||||||||||  ||||||      
T  18125154 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgcc 18125253  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaattta 203  Q
    || |||   | ||||||| | ||||||||||||||  ||| || ||||||||| | |||||||||||| |  |||||||| ||||||||| |||||    
T  18125254 gtcgtaagaatagtagatcaaatggaggagagtcgggtta-aagaggtagagggagacctagaaaaactattagagaaaccattagaaaagattta 18125348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 271
Target Start/End: Complemental strand, 26905098 - 26904945
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||| |||||||  || | || ||||||||| | |||||| ||||| |  |||||||| ||||||||| ||||||||||  ||||||    
T  26905098 agagtagatcaaatggaagagagtcagataaaaagaggtagagggagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaataagt 26904999  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
    || |  ||||||| ||||   ||| |||| |||| ||||||||||||||||||||    
T  26904998 tggac-caaatatagtttataataaaacactatgtcgtaatttgatccatatagt 26904945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 266
Target Start/End: Complemental strand, 12491406 - 12491181
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||   ||||||||| | ||| ||||||||    
T  12491406 agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatgaaggagagt 12491307  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagata 240  Q
    |   ||| || ||||||| ||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| | || |  ||||    
T  12491306 caagttaaaagaggtagatgaagacctatgaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgata 12491207  T
Q  241 gaacattatgacgtaatttgatccat 266  Q
    ||||| |||| ||| |||||||||||    
T  12491206 gaacactatggcgtcatttgatccat 12491181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 28169517 - 28169634
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| ||||| |||||| | ||||||||||||||| ||| |||| ||| || || ||||| || ||||||| ||||  |||| || ||||||     
T  28169517 aggtagaggaagacctaaaaaaactataagagaaactattaggaaagattttgagattaatgagttggattcaaatatggtttatgataaaatattatgg 28169616  T
Q  252 cgtaatttgatccatata 269  Q
     ||||||| |||||||||    
T  28169617 tgtaattttatccatata 28169634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 31715991 - 31716059
Alignment:
Q  198 aatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| || || ||||| || ||||||| |||| ||||||||||||||| |||||||||||||||    
T  31715991 aatttagagattaattagttggatccaaatatggtttaagatagaacattatggcgtaatttgatccat 31716059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 264
Target Start/End: Original strand, 2027632 - 2027767
Alignment:
Q  129 atggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaata 228  Q
    |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || ||||  || ||||||    
T  2027632 atggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaatgatttagaggtcaatgagttatattcaaata 2027731  T
Q  229 ttgttttagatagaacattatgacgtaatttgatcc 264  Q
    | ||||  ||||||||| |||||||  |||||||||    
T  2027732 tggtttatgatagaacactatgacgccatttgatcc 2027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 32043580 - 32043698
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||  | ||| |||| |||||||| || ||| || | || |||||||||| ||||| |||||||||||  | |||||||| |||  |    
T  32043580 agagagagttggggtatcacctatagtacaaaagatggtagaaactagactttggtggtttggccatgtagagagaagacctgtggatgttgtagtaagg 32043679  T
Q  117 agagtagataagatggagg 135  Q
    ||| ||||| |||||||||    
T  32043680 agaatagatcagatggagg 32043698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 271
Target Start/End: Original strand, 29735847 - 29736051
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||||| |||| | |||||  |||||| ||||||||||| | |  |||  ||||| ||| |||| || |||||||  || |||| || |||||||| | |    
T  29735847 ttaggtagtttcgacatgtacagagaataccgatagatgctataatacgaagagtggatcagatagacgagagtcagatcagaagagatagaggaagatc 29735946  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| | |||| || ||||||||||| | |||  | || | ||||||||| |||||||  |||  ||| |||| ||||||||||||||||| |||    
T  29735947 tagaaaaactataagaaaagctattagaaaagacttaatgattaacaagttgaatccaaatatgatttatgattgaactttatgacgtaatttgattcat 29736046  T
Q  267 atagt 271  Q
     ||||    
T  29736047 gtagt 29736051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 42584411 - 42584475
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatg 131  Q
    ||||||||||||||||||| ||||||| |||  |||||||||| ||||  ||||||||| |||||    
T  42584411 ttaggtggtttgggcatgtagagagaaaacctgtagatgttgtagtacgaagagtagatcagatg 42584475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 45512787 - 45512611
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||| |||||||||||| | ||| |||||||||||||||  |||||||  |||| |||||||||||| |  |||||||| |  |||||   || |||       
T  45512787 agagggagttggggtagcacctatagtagaaaagatgatggaaaataagcttagatggtttgggcatataaagagaagatctctagattcggtagtaagc 45512688  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattag 193  Q
    ||||||||| ||||||  || ||||  || |  | ||| ||||||| |||||||||||| | |||||||||||||||    
T  45512687 agagtagattagatggcagatagtcaaatcactagaggcagaggaagacctagaaaaactataagagaaactattag 45512611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 36069758 - 36069845
Alignment:
Q  183 gaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatag 270  Q
    ||||||||||  ||| |||||||| || || |||||  || |||||| ||||  |||||||||||| | |||||||||||||||||||    
T  36069758 gaaactattaacaaatatttagagattaatgagttgggtagaaatatggtttatgatagaacattacggcgtaatttgatccatatag 36069845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 2216413 - 2216525
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| ||||||||||| || |||||||||||||| | || |||||||| |  || ||||| || | |||| |||||  |||||||||||||      
T  2216413 aggtagaggaagacctagaaaaaacataagagaaactatta-agaagatttagagatcaatgagttggatcctaata-tgtttatgatagaacattatag 2216510  T
Q  252 cgtaatttgatccat 266  Q
     ||||||||||||||    
T  2216511 tgtaatttgatccat 2216525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 97
Target Start/End: Complemental strand, 2776471 - 2776441
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagacc 97  Q
    |||||||||||||||||||||||||||||||    
T  2776471 ttaggtggtttgggcatgttgagagaagacc 2776441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 38178479 - 38178377
Alignment:
Q  90 agaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaacta 189  Q
    ||||||||  ||||| |||| |||  |||||||||| |||||||||| ||||  ||    | ||||||||||| |||||||||||| | |||||||||||    
T  38178479 agaagacctgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcgctagaggtagaggaagacctagaaaaactataagagaaacta 38178380  T
Q  190 tta 192  Q
    |||    
T  38178379 tta 38178377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 45041444 - 45041359
Alignment:
Q  180 agagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||||||||||||| ||| ||||||||||| || ||||| || | ||||| ||||  |||||  ||||||| |||||||||||||||    
T  45041444 agagaaactattaggaaagatttagaggttaatgagttggat-ccaatatggtttatgatagcgcattatggcgtaatttgatccat 45041359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 266
Target Start/End: Original strand, 24558693 - 24558722
Alignment:
Q  237 gatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||||||||||||||||||||||    
T  24558693 gatagaacattatgacgtaatttgatccat 24558722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 42584555 - 42584595
Alignment:
Q  223 caaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  42584555 caaatatggtttatgatagaacattatgacgtaatttgatc 42584595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 38684957 - 38685206
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||  || |||       
T  38684957 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaaga 38685056  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  38685057 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 38685156  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||| |||| ||| |||||||||||    
T  38685157 tggatccaaatatggtttatgatagaacaatatggcgtcatttgatccat 38685206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 1275255 - 1275503
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||||| |  || |||  || |||       
T  1275255 agagagagt-ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtaaatgccgtggtaaga 1275353  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   |||  |  |||||||||| |||||||||||| |  |||||||| |||| |||  ||||||||||| || |||    
T  1275354 agagtagatcaaatggaggagagtcaagttaacaggggtagaggaagacctagaaaaactattagagaaaccattataaaggatttagaggttaatcagt 1275453  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||| ||||| | || || |||||||||||||||||| |||||||||||    
T  1275454 tgaatccaaatttggtgtttgatagaacattatgacgtcatttgatccat 1275503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 4496374 - 4496623
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  4496374 agagagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 4496473  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  4496474 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 4496573  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| | | |||||||||||    
T  4496574 tggatccaaatttggtgtatgatagaacactatggcatcatttgatccat 4496623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 7359501 - 7359304
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    ||||||||||||| ||||| |||||||||    |||||  ||| |||  |||||||||| |||||||||| |||| ||| |  | ||| |||||||  ||    
T  7359501 ttaggtggtttgg-catgtagagagaagatatgtagattctgtagtaaggagagtagatcagatggaggatagtcatatcactagaggcagaggaaagcc 7359403  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||||| |||||||||||||   |||||| ||||| || |||||||| ||  |||||| ||||  |||| |||||||||||||||||||||||||    
T  7359402 tagaaaaaccataagagaaactatttagaaaaatctagagattaataagttggatcgaaatatggtttacgata-aacattatgacgtaatttgatccat 7359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 15168864 - 15168987
Alignment:
Q  120 gtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttga 219  Q
    |||||| ||||||||||||||   ||||||| ||||||||||  |||||||||||| | |||||||||| |||| ||||||||||||||| ||||||||     
T  15168864 gtagattagatggaggagagtgagattagaagaggtagaggacaacctagaaaaactataagagaaactgttaggaaaaatttagaggttaataagttgg 15168963  T
Q  220 atacaaatattgttttagatagaa 243  Q
    || || |||| ||||  |||||||    
T  15168964 atccagatatggtttatgatagaa 15168987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 24178500 - 24178689
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  24178500 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagacccgtagatgccgtggtaaga 24178599  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagag 206  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||    
T  24178600 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagag 24178689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 31636221 - 31636088
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||| ||||||||||| | ||| ||||||||||||| || ||| || | ||||||||||||||||||| |||||||||||  | ||||||    
T  31636221 gacagcattagagaaagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtggatgtt 31636122  T
Q  108 gttgtacagagagtagataagatggaggagagtc 141  Q
    || |||  |||||||||| |||||| || |||||    
T  31636121 gtagtaaggagagtagattagatggtggggagtc 31636088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 79503 - 79679
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||||| ||| ||||||||||||| |  |||| | | ||||||||||||| ||||| ||||||||||| ||||||  ||| |||  |    
T  79503 agagagagttggggtagtacctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagacctatagattctgtagtaagg 79602  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattag 193  Q
    ||||| ||| | ||||||||  |||| || | || |||  |||||| |||||||||||| |  ||| ||||||||||    
T  79603 agagtcgatcaaatggaggatggtcggatcacaagaggctgaggaagacctagaaaaactatcagataaactattag 79679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 1287871 - 1287680
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| ||||||||||   ||||||  || |||       
T  1287871 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgccgtggtaaga 1287772  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||    
T  1287771 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggt 1287680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 28007 - 28117
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    |||| |||||| |||||||||||| | ||||||||||||||| ||| ||||||||||| |||||||| || |||||||  |||  ||||||||| ||||     
T  28007 aggttgaggaagacctagaaaaactataagagaaactattaggaaagatttagaggttaataagttggatccaaatatgatttctgatagaacactatgg 28106  T
Q  252 cgtaatttgat 262  Q
    | |||||||||    
T  28107 cataatttgat 28117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 13561578 - 13561429
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  13561578 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 13561479  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||| ||| ||||| ||||||||| |||| ||| |||||||||||    
T  13561478 tggatccaactatggtttttgatagaacactatggcgtcatttgatccat 13561429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 32516681 - 32516797
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| ||||| |||||| | ||||||||||||||||  | |||||||| || | |||||| || ||||||| ||||  ||||||| |||||||    
T  32516681 aggtagaggaagaccta-aaaaactataagagaaactattagagcagatttagagattaacaagttggattcaaatatggtttatgatagaatattatga 32516779  T
Q  252 cgtaatttgatccatata 269  Q
    |||||||||||| |||||    
T  32516780 cgtaatttgatcgatata 32516797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 16347670 - 16347442
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||  ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||   ||| |       
T  16347670 agagagagcgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgcctttgcaaga 16347571  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  | |||||| ||||||||| ||||||||||  || | |    
T  16347570 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactattaaagaaaccattagaaaagatttagaggtcaatgatt 16347471  T
Q  217 tgaatacaaatattgttttagatagaaca 245  Q
    || |||||||||| ||||  |||||||||    
T  16347470 tggatacaaatatggtttatgatagaaca 16347442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 266
Target Start/End: Original strand, 14911264 - 14911411
Alignment:
Q  119 agtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttg 218  Q
    ||||||| | ||| ||||||||||  ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||| || |||||    
T  14911264 agtagatcaaatgaaggagagtcgggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggttaatgagttg 14911363  T
Q  219 aatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
     || |||||||  |||| ||||||| | |||| ||| |||||||||||    
T  14911364 gatccaaatatgatttttgatagaatactatggcgtcatttgatccat 14911411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 15489784 - 15489609
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||||| |||  |||||||||||| |  ||| | |  |||| |||||||||||||| |||||||||    ||||| ||||  ||  |    
T  15489784 agagagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagatttgtagattttgtattaagg 15489685  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactatta 192  Q
    ||||||||| |||||||||| ||| | || |  | ||| ||||||| |||||||||||| | ||||||||||||||    
T  15489684 agagtagattagatggaggatagttgaatcactagaggcagaggaagacctagaaaaacaataagagaaactatta 15489609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 12492679 - 12492431
Alignment:
Q  17 agagagagttggggtagtagctac---agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgta 113  Q
    ||||||||| ||||||| | ||||   |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  ||  ||    
T  12492679 agagagagtgggggtagcacctactatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtgtta 12492580  T
Q  114 cagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgata 213  Q
       ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  ||     
T  12492579 agaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatg 12492480  T
Q  214 agttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    ||||| || ||||| | || |  ||||||||| |||| ||| |||||||    
T  12492479 agttggatccaaatttggtgtatgatagaacactatggcgtcatttgat 12492431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 266
Target Start/End: Original strand, 20456787 - 20457012
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || ||||||   |||| |||||||  ||||| |||||||||||  ||||||  || |||   ||||||||| | ||||||||||||    
T  20456787 agtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagt 20456886  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgtttta-gat 239  Q
    |   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  |||||||||||  |||| ||| | || |||    
T  20456887 caagttaaaagaggtagaggaagacctacgaaaactattagagaaaccattagaaaggatttagaggtcaataagttgaatctaaat-ttgatgtatgat 20456985  T
Q  240 agaacattatgacgtaatttgatccat 266  Q
    ||||||||||| ||| |||||||||||    
T  20456986 agaacattatggcgtcatttgatccat 20457012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 3301946 - 3302083
Alignment:
Q  129 atggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaata 228  Q
    |||||||||||||   ||| || ||||||||||| |||||  |||||||  |||||||| |||| |||| ||||||||||  || ||||| || ||||||    
T  3301946 atggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattagagaaaccattataaaagatttagaggtcaatgagttggatccaaata 3302045  T
Q  229 ttgttttagatagaacattatgacgtaatttgatccat 266  Q
    | ||||| ||||||||| || | ||| |||||||||||    
T  3302046 tggtttttgatagaacactacggcgtcatttgatccat 3302083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 14749297 - 14749542
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||||| |||| | ||| |||||||||  || || ||| || | |||| |||||||| ||||| |||||||||||  | |||  |||||||  |    
T  14749297 agagagagttggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtagagagaagacctgtggattctgttgtaagg 14749396  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||| ||| ||||||||| |||||  || |  | ||| ||||||| |||||||||||| | |||||||||||| |  ||  || ||||| || |  |||    
T  14749397 agagtcgatcagatggaggggagtcaaatcactaaaggcagaggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagt 14749496  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    || ||| |||||| ||||| ||||||||| |||| ||| |||||||    
T  14749497 tggatagaaatatggtttttgatagaacactatggcgtcatttgat 14749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 33667209 - 33667286
Alignment:
Q  20 gagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    |||||||||||||| | ||| ||||||||||||| || ||| || | ||||||||||||||||||| |||||||||||    
T  33667209 gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacc 33667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 2075766 - 2075586
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||  | |||||||||||||| || || | ||||   |||| |||||||||||||| |||||||||||  ||||||  || |||       
T  2075766 agagagagtgggggtaacacctacagtagaaaagttggtagacaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaaga 2075667  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaa 197  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| | ||| |  |||||||| |||||||||    
T  2075666 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggataactattagagaaaccattagaaaa 2075586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 14665704 - 14665931
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||| ||| ||||| ||||||   |||| |||||||| ||||| |||||||||||  ||||||  || |||       
T  14665704 agagagagtgggggtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaaga 14665803  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||| ||||||   ||| || ||||||||| | |||||| ||||| |  |||||||| ||||| || |||||||| ||  || |||    
T  14665804 agagtagatcaaatggagcagagtcaggttaaaagaggtagagggagacctaggaaaactattagagaaaccattaggaagaatttagaagtcaatgagt 14665903  T
Q  217 tgaatacaaatattgttttagatagaac 244  Q
    || || ||||||| ||||  ||||||||    
T  14665904 tggatccaaatatggtttatgatagaac 14665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 28276390 - 28276477
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| |||||||| |||||||||||  |||||||| || ||||||||||||  ||||||| | ||||  ||||||||||||||    
T  28276390 aagagaaaccattagaaagaatttagaggtcaataagttggattcaaatattgtttatgatagaaaactatggtgtaatttgatccat 28276477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 262
Target Start/End: Complemental strand, 28977160 - 28976906
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| ||||||| |||||| |||||||||||  || |||      
T  28977160 gacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgtatatgcc 28977061  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    || |||   || |||||| | |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| |||| |||  |||||||||    
T  28977060 gtggtaagaagggtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattataaaggatttagagg 28976961  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    |  || ||||| || ||||| | || |  ||||||||| |||| ||| |||||||    
T  28976960 tcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgat 28976906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 27553845 - 27553909
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatg 105  Q
    ||||||||| |||||| |||||||  |||||||||||| |||||| ||||||||| |||||||||    
T  27553845 agtagaaaatatgatataaaataagcttaggtggtttgagcatgtagagagaagatcgatagatg 27553909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 6889122 - 6889232
Alignment:
Q  156 agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgta 255  Q
    |||||||  ||||||||||| | ||||||||||||||| ||| |||||||| || || |||||     |||||| ||||  |||||||||||||| ||||    
T  6889122 agaggaaggcctagaaaaactataagagaaactattaggaaagatttagagattaattagttgggccaaaatatggtttatgatagaacattatggcgta 6889221  T
Q  256 atttgatccat 266  Q
    |||| ||||||    
T  6889222 atttaatccat 6889232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 2712936 - 2713109
Alignment:
Q  19 agagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagag 118  Q
    ||||||||||||||| | ||| |||  |||||||| || | | || | ||||||||||||||||||| |||||||||||  | |||  |||   |  |||    
T  2712936 agagagttggggtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggag 2713035  T
Q  119 agtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactatta 192  Q
    ||||||| |||||||||||||||  || |  | ||  || |||| |||||||||||| | ||||||||||||||    
T  2713036 agtagatcagatggaggagagtcaaatcactagagtcaggggaagacctagaaaaactataagagaaactatta 2713109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 2915687 - 2915539
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||||||| |||||| | ||| |  |||||||| ||||||||  ||||||||||  || |||    
T  2915687 agagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggataactattagagaaaccattagaaaggatttagaggtcaatgagt 2915588  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| ||| ||  ||||||||| |||| ||| |||||||||||    
T  2915587 tggatccaaat-ttggttatgatagaacactatggcgtcatttgatccat 2915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 11002724 - 11002647
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgt 85  Q
    |||| ||| |||||||||| |||||| | ||||||||||||| ||| || ||| || | |||||||||||||||||||    
T  11002724 gacaacattagagagagttcgggtagcacctacagtagaaaacatggtagaaactagacttaggtggtttgggcatgt 11002647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 35615437 - 35615526
Alignment:
Q  181 gagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatag 270  Q
    |||||||||||   |||||||||||| || || ||||| ||| |||||| ||||  |||||||||||||||| ||| ||||| |||||||    
T  35615437 gagaaactattcataaaaatttagagattaatgagttggataaaaatatagtttatgatagaacattatgacctaacttgattcatatag 35615526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 14725626 - 14725754
Alignment:
Q  135 gagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttt 234  Q
    |||||||| ||||||| ||||||||||| | |||||||||  | |||| ||||||||| |||| ||||| ||||| || ||||| ||  |||||| ||||    
T  14725626 gagagtcggattagaagaggtagaggaaaagctagaaaaattataagataaactattataaaagatttaaaggttaatgagttggatcaaaatatggttt 14725725  T
Q  235 tagatagaacattatgacgtaatttgatc 263  Q
      ||| ||||| || ||| ||||| ||||    
T  14725726 atgatcgaacaatacgacataattcgatc 14725754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 28676589 - 28676665
Alignment:
Q  21 agagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    |||||| |||||| ||||| ||||||||||||| |  ||||||   ||||||||||| ||||||| |||||||||||    
T  28676589 agagttcgggtagcagctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaagacc 28676665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 32442220 - 32442168
Alignment:
Q  214 agttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||| || ||||||| ||||| |||||||||||||| |||||||||||||||    
T  32442220 agttggatccaaatatggttttggatagaacattatggcgtaatttgatccat 32442168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 38501610 - 38501498
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| |||||||||||||||| || | || || | || ||| |||||| | ||| | || |||||||||||||||  ||||||||||  ||||||    
T  38501610 agagtagattagatggaggagagtcggatcaaaagagatggatgaagacctaggagaactataaaagaaactattagaaagtatttagaggtcaataagt 38501511  T
Q  217 tgaatacaaatat 229  Q
    || || |||||||    
T  38501510 tggatccaaatat 38501498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 38684611 - 38684727
Alignment:
Q  158 aggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaat 257  Q
    ||||| |||||||||||| | |||||||||| |||  ||| || ||||| || || ||||| ||| |||||| ||  | |||||||||||||| ||| ||    
T  38684611 aggaagacctagaaaaactacaagagaaacttttaagaaagatctagagattaattagttggatagaaatatggtacttgatagaacattatggcgttat 38684710  T
Q  258 ttgatccatatagttga 274  Q
    ||||| ||| |||||||    
T  38684711 ttgattcatgtagttga 38684727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 14667753 - 14667816
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttggg 80  Q
    ||||||||||||||||| | ||| ||||||||||||| |  |||||| | ||||||||||||||    
T  14667753 agagagagttggggtagcacctatagtagaaaagatggtggaaaatagacttaggtggtttggg 14667816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 10639427 - 10639541
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| | || |  ||||||||| ||||     
T  10639427 aggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgg 10639526  T
Q  252 cgtaatttgatccat 266  Q
    ||| |||||||||||    
T  10639527 cgtcatttgatccat 10639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 12577053 - 12576919
Alignment:
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataag 215  Q
    |||||||||| |||||||||  |||| ||| |  | ||| ||||||| |||||||||||| | |||| |||||||||  ||| || ||||| || || ||    
T  12577053 gagagtagatcagatggagggtagtcctatcactagaggcagaggaagacctagaaaaactacaagataaactattaagaaagatctagagattaatgag 12576954  T
Q  216 ttgaatacaaatattgttttagatagaacattatg 250  Q
    ||||||| |||||| || |  |||||| |||||||    
T  12576953 ttgaatagaaatatggtatatgatagaccattatg 12576919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 34273138 - 34273252
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| | || |  ||||||||| |||||    
T  34273138 aggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatga 34273237  T
Q  252 cgtaatttgatccat 266  Q
    ||| ||| |||||||    
T  34273238 cgtcattcgatccat 34273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 43475280 - 43475354
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtc 141  Q
    |||||||||||||| ||   |||||||||||  |||||||||| |||  |||||||||| |||||||||| ||||    
T  43475280 ttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcagatggaggatagtc 43475354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 418158 - 418077
Alignment:
Q  185 aactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||| |||| ||| |||||||| || || ||||| || ||||| | ||||  |||||||||||||| |||||||||||||||    
T  418158 aacttttaggaaagatttagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccat 418077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 1525733 - 1525810
Alignment:
Q  116 gagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattag 193  Q
    |||||||||| |||||||||||||||  || |  | |||||| || | |||||||||||| | |||||||||||||||    
T  1525733 gagagtagatcagatggaggagagtcagatcactagaggtaggggtagacctagaaaaactacaagagaaactattag 1525810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 11069234 - 11069201
Alignment:
Q  237 gatagaacattatgacgtaatttgatccatatag 270  Q
    |||||||||||||| |||||||||||||||||||    
T  11069234 gatagaacattatggcgtaatttgatccatatag 11069201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 42504333 - 42504280
Alignment:
Q  223 caaatattgttttagatagaacattatgacgtaatttgatccatatagttgatt 276  Q
    ||||||| ||||  ||||||||||||||||||||||||||| |  |||||||||    
T  42504333 caaatatggtttatgatagaacattatgacgtaatttgatcaacgtagttgatt 42504280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 12534423 - 12534459
Alignment:
Q  238 atagaacattatgacgtaatttgatccatatagttga 274  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  12534423 atagaacattatggcgtaatttgatccatttagttga 12534459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 270
Target Start/End: Original strand, 20367108 - 20367136
Alignment:
Q  242 aacattatgacgtaatttgatccatatag 270  Q
    |||||||||||||||||||||||||||||    
T  20367108 aacattatgacgtaatttgatccatatag 20367136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 34273017 - 34273097
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||||||| ||||||| | ||| | |||||||| || || ||||||   |||| |||||||||||||| |||||||||||    
T  34273017 agagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 34273097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 13149349 - 13149575
Alignment:
Q  45 gaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgta 144  Q
    |||||||||||| |||||| | || |||||| ||| ||||| ||||||||||   || ||| ||| |  |  |||||||||||||||||||| ||||  |    
T  13149349 gaaaagatgatagaaaatagacttcggtggtctggccatgtagagagaagacatgtaaatgatgtagctcgaagagtagataagatggaggaaagtcaga 13149448  T
Q  145 ttagaataggt-agaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaa 243  Q
    | |||| | || ||||||| || ||| ||||| | ||||||||||||||  ||| ||||||||||| || ||| |||| ||||||| |||   |||||||    
T  13149449 tcagaagatgttagaggaagacttaggaaaactataagagaaactattatgaaagatttagaggttaatgagtagaatccaaatatcgttgatgatagaa 13149548  T
Q  244 cattatgacgtaatttgatccatatag 270  Q
    ||||||||| |||||||||||||||||    
T  13149549 cattatgacataatttgatccatatag 13149575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 3866062 - 3866311
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||| ||||| || || ||||||   |||| ||||||| |||||| |||||||||||  ||||||| || |||       
T  3866062 agagagagtgggggtagcacctatagtaaaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgtagatgtcgtggtaaga 3866161  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||||||||| |  |||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  3866162 agagtagatcaaatggaggagagacaaattaaaagaggtagaggaaaacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 3866261  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||||| | |||||||||||    
T  3866262 tggatccaaatttggtgtatgatagaacactatgacatcatttgatccat 3866311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 38429874 - 38430123
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| |||| || | ||| |||||||||| || || ||||||   |||| |||||||| |||||  ||||||||||  || |||  ||||||       
T  38429874 agagagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtatatgccgttgtaaga 38429973  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || | ||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || |||    
T  38429974 agagtagatcaaatggaggagagtcaggttaaaagaagtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 38430073  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||| ||||||||| |||| ||| |||||||||||    
T  38430074 tggatccaaatatggtttttgatagaacactatggcgtcatttgatccat 38430123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 36183441 - 36183629
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || |||||||  |||| |||||| ||||||| |||||||||||  ||||||  || |||       
T  36183441 agagagagtaggggtagcacctatagtagaaaagttggtagaaaataatcttagttggtttcggcatgtagagagaagacccgtagatgccgtggtaaga 36183540  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttaga 205  Q
    ||||||||||| |||||||||||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  |||||||    
T  36183541 agagtagataaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttaga 36183629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 266
Target Start/End: Complemental strand, 45367907 - 45367668
Alignment:
Q  27 ggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagata 126  Q
    ||||||| | ||| |||||||||| || || |||||||  |||| |||||||| ||||| |||||||||||  ||||||  |||||    || ||||||     
T  45367907 ggggtagcacctatagtagaaaagttggtagaaaataaccttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagggtagatc 45367808  T
Q  127 agatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaa 226  Q
    | |||||||||||||   ||| || ||||||||||| ||  |  |||||||  |||||||  ||||||||  ||||||||||  || ||||| || ||||    
T  45367807 aaatggaggagagtctagttaaaagaggtagaggaagactcaagaaaaccattagagaaatcattagaaaggatttagaggtaaatgagttggatccaaa 45367708  T
Q  227 tattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||  |||| ||||||||| |||||||| |||||||||||    
T  45367707 tatgatttttgatagaacactatgacgtcatttgatccat 45367668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 11992409 - 11992151
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| |||||||||  |||||| | ||| |||||||||| || || |||||||  |||| |||||||| ||| | |||||||||||  ||||||      
T  11992409 gacaccattagagagagtgagggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttggacatatagagagaagacccgtagatgcc 11992310  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    |||||    ||||| ||| | ||||||||||||||  ||| || ||||| ||||| |||||  |||||||  || ||||  ||||||||  |||||||||    
T  11992309 gttgttagaagagtggatcaaatggaggagagtcgggttaaaagaggtaaaggaagacctaagaaaaccattagggaaatcattagaaaggatttagagg 11992210  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||  || |||||||  |||| |||||||||||||| ||| |||||||||||    
T  11992209 tcaatgagttagatccaaatatgatttttgatagaacattatggcgttatttgatccat 11992151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 2610578 - 2610827
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| ||| |||||| || || ||||||   |||| |||||||||||||| ||||||||||   ||||||| || |||       
T  2610578 agagagagtgggggtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgtcgtggtaaga 2610677  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||| |||||||   ||| || ||||||||||| |||||  ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  2610678 agagtagatcaaatggatgagagtcaagttaaaagaggtagaggaagacctatgaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 2610777  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  2610778 tggatccaaatttggtgtatgatagaacactatggcgttatttgatccat 2610827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 22 - 263
Target Start/End: Original strand, 12141539 - 12141780
Alignment:
Q  22 gagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagt 121  Q
    |||||||||||| | ||| ||||||||||||| |  |||| |   |||||||||||||||| || || ||||||||  |||||  | | |||  ||||||    
T  12141539 gagttggggtagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagacctgtagattctctagtaaggagagt 12141638  T
Q  122 agataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaat 221  Q
    |||| |||| ||||| ||||  |||| || ||||||||||| |||||||||| | | | ||||||||||||| ||| | |||||| || || | ||| ||    
T  12141639 agatcagattgaggatagtcaaattacaagaggtagaggaagacctagaaaagctataggagaaactattaggaaagacttagagattaatgacttggat 12141738  T
Q  222 acaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
     ||||||| || |  |||||||||||||| | | ||||||||    
T  12141739 ccaaatatggtatatgatagaacattatggcatgatttgatc 12141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 271
Target Start/End: Original strand, 12734680 - 12734944
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||||||||  || || ||||||   |||| |||||||| |||||  ||||||||||  ||||||      
T  12734680 gacaccattagagagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtagatgcc 12734779  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaata-ggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagag 206  Q
    || |||   ||||||||| | |||||||||||||   ||| || | |||||||| | |||||| ||||| |  |||||||| ||||||||  ||||||||    
T  12734780 gtggtaagaagagtagatcaaatggaggagagtcaggttaaaagagggtagagggagacctaggaaaactattagagaaaccattagaaaggatttagag 12734879  T
Q  207 gttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
    ||  || ||||| || ||||||| ||||  ||||||||| ||||  |||||||||||||| ||||    
T  12734880 gtcaatgagttggatccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagt 12734944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 43752239 - 43752120
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||||||||||| | ||| |||||||||| || || ||||||   ||||||| ||||| ||||| ||||||||||| ||||||  ||| |||  |    
T  43752239 agagagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagattatgtagtaggg 43752140  T
Q  117 agagtagataagatggagga 136  Q
    ||||||||| ||||||||||    
T  43752139 agagtagatcagatggagga 43752120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 263
Target Start/End: Complemental strand, 45543229 - 45543119
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||| ||||||| | ||||||||||||||||||| ||||||||| | || ||||  || ||||||| ||||  ||||||||||||||     
T  45543229 aggtagaggaagacctggaaaaactataagagaaactattagaaaagatttagagg-taatgagttcgatccaaatatggtttatgatagaacattatgg 45543131  T
Q  252 cgtaatttgatc 263  Q
    |||| |||||||    
T  45543130 cgtactttgatc 45543119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 39029706 - 39029820
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||  |||| ||   ||||||| ||||||||| ||||||||||  || ||||| || ||||||| ||||| ||||||||||||||     
T  39029706 aggtagaggaagacctaagaaaaacattcgagaaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacattatgg 39029805  T
Q  252 cgtaatttgatccat 266  Q
    ||| |||||||||||    
T  39029806 cgtcatttgatccat 39029820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 12882197 - 12882088
Alignment:
Q  157 gaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaa 256  Q
    |||||| ||||| |||| | | ||||||||||| ||| ||| ||||||||||| || ||||| || ||||||| ||||  ||||||||||| || |||||    
T  12882197 gaggaagacctataaaagctataagagaaactactaggaaatatttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaa 12882098  T
Q  257 tttgatccat 266  Q
    ||||||||||    
T  12882097 tttgatccat 12882088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 41 - 245
Target Start/End: Complemental strand, 41763310 - 41763107
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagt 140  Q
    |||||||||| || || ||||||   ||||||||||||| ||||  |||||||||||  ||||||  ||||||   | ||||||| | ||||||||||||    
T  41763310 agtagaaaagttggtagaaaataggcttaggtggtttggacatgcagagagaagacctgtagatgccgttgtaagaaaagtagatcaaatggaggagagt 41763211  T
Q  141 cgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagata 240  Q
    |   ||| || ||||||||||| |||||  |||||||   ||||||| ||||||||||||||| ||||  || ||||| || |||||||  |||| ||||    
T  41763210 caggttaaaaaaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaaaattta-aggtcaattagttggatccaaatatgttttttgata 41763112  T
Q  241 gaaca 245  Q
    |||||    
T  41763111 gaaca 41763107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 451890 - 451691
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||||||||| |||| ||||||  ||||||  || |||   ||||||||| | |||||||||||||   ||| || ||||||||||| |||    
T  451890 ttagatggtttgggcatgtagagaaaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaaaaggtagaggaagacc 451791  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||| ||||| |  |||||||| ||||||||  ||||||||||   | ||||| || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  451790 taggaaaactattagagaaaccattagaaaggatttagaggtcagtgagttggatccaaatttagtgtatgatagaacactatggcgtcatttgatccat 451691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 8180770 - 8180961
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || |||||||  |||| |||||||||||||| |||||||||||  | ||||  || |||       
T  8180770 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttgggcatgtagagagaagacctgtggatgccgtggtaaga 8180869  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    ||||||||| | |||||||||||||   ||| ||  |||||||||| || ||| ||||| |  ||| |||| ||||||||  ||||||||||    
T  8180870 agagtagatcaaatggaggagagtcaagttaaaagcggtagaggaagacataggaaaactattagataaaccattagaaaggatttagaggt 8180961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 9496018 - 9496105
Alignment:
Q  179 aagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||||||||||||   ||| ||||||||||| || ||||| || ||||||| ||||  |||||||||||||| |||||||||||||||    
T  9496018 aagagaaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccat 9496105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 38452977 - 38452787
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||  || ||| ||    
T  38452977 agagagagtgggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggta-ag 38452879  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
    |   ||||| | |||||||| ||||   ||| || ||||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||    
T  38452878 aagatagatcaaatggaggaaagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggt 38452787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 271
Target Start/End: Complemental strand, 6237945 - 6237791
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| ||||||||||||| | | | | || |||||||| || |||||||||||| | |||| |||| ||||||||  ||||||||||  || |||    
T  6237945 agagtagatcagatggaggagagacatgtcaaaagaggtagagtaagacctagaaaaactagaagataaaccattagaaatgatttagaggtcaatcagt 6237846  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
    || || ||||||| ||||  ||||||||| ||||   | |||||||| |||||||    
T  6237845 tggattcaaatatagtttatgatagaacactatgggatgatttgatctatatagt 6237791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 266
Target Start/End: Complemental strand, 7326397 - 7326203
Alignment:
Q  72 tggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaa 171  Q
    |||||||||||||| |||||||||||  ||||||  || |||   ||||||||| | ||| |||||||||   ||| || ||||||||||| || ||| |    
T  7326397 tggtttgggcatgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatgaaggagagtcaagttaaaagaggtagaggaagacatagga 7326298  T
Q  172 aaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |||| |  |||||||| ||||||||  ||||||||||  || ||||| || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  7326297 aaactattagagaaaccattagaaatgatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 7326203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 266
Target Start/End: Original strand, 18958903 - 18959150
Alignment:
Q  23 agttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgg----gcatgttgagagaagaccgatagatgttgttgtacagag 118  Q
    ||||||||||| | ||| ||||||||||||| |  ||||||   |||||||||||||    |||||  |||||||||||   || | |||| |||  |||    
T  18958903 agttggggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttggttgggcatgcagagagaagacctgcagcttttgtagtaaggag 18959002  T
Q  119 agtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttg 218  Q
    ||||||| |||||||||| ||||  || |  | ||| ||||||| |||||||||||| | |||||||||||| || ||| | || ||| || || |||||    
T  18959003 agtagatcagatggaggatagtcagatcatcagaggcagaggaagacctagaaaaactacaagagaaactataaggaaagacttggagattaatgagttg 18959102  T
Q  219 aatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
     ||  |||||| || |  |||||||||||||| | |||||||||||||    
T  18959103 gatcaaaatatggtctatgatagaacattatggcataatttgatccat 18959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 35755431 - 35755288
Alignment:
Q  127 agatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataa----gttgaata 222  Q
    |||||||||| |||| ||| | || ||| |||||||  ||||||||||| | || |||||||||||| ||| ||||||||||| || |    |||| ||     
T  35755431 agatggaggaaagtcatatcaaaagagggagaggaaggcctagaaaaactataacagaaactattaggaaagatttagaggttaattaatgggttggatc 35755332  T
Q  223 caaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||| ||||  ||||||||||| || |||||||||||||||    
T  35755331 caaatatggtttatgatagaacattgtgccgtaatttgatccat 35755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 265
Target Start/End: Complemental strand, 3243954 - 3243697
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| ||||||||| ||||||| | ||| |||| ||||| ||||  ||||||   |||| ||||||||| |||| |||||||||||  ||||||      
T  3243954 gacaccattagagagagtgggggtagcacctatagtaaaaaagttgatggaaaataggcttagatggtttgggaatgtagagagaagacccgtagatgcc 3243855  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    || |||   ||| ||||| | |||||||||||||   ||| || ||| ||||||| |||||| ||||| |  |||||||| ||||||||  |||||||||    
T  3243854 gtggtaagaagaatagatcaaatggaggagagtcaagttaaaagaggcagaggaagacctaggaaaactattagagaaaccattagaaaggatttagagg 3243755  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatcca 265  Q
    |  || ||||| || ||| | | || |  ||||||||| |||| ||| ||||||||||    
T  3243754 tcaatgagttggatccaagtttggtgtatgatagaacactatggcgtcatttgatcca 3243697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 28508768 - 28508917
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || | ||||||||| |||||| ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  28508768 agagtagatcaaatggaggagagtcaagttaaaagatgtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 28508867  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | ||||  ||||||||| |||| ||| |||||||||||    
T  28508868 tggatccaaatttggtttatgatagaacactatggcgtcatttgatccat 28508917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 67 - 271
Target Start/End: Complemental strand, 41197470 - 41197265
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaata-ggtagaggaatac 165  Q
    |||| |||||||| ||||| ||||||||| |  ||||||  ||||||   ||||||||| | |||||||||||||   ||| || | ||||||| || ||    
T  41197470 ttagatggtttggacatgtagagagaagatccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaaaaaggtagagaaagac 41197371  T
Q  166 ctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatcca 265  Q
    |||  |||||||   ||||||| |||| |||| ||||||||||  |  ||||| || | ||||| ||||| |||||||||||||| ||| ||||||||||    
T  41197370 ctaagaaaaccatttgagaaaccattataaaagatttagaggtcaacgagttggatcccaatatggtttttgatagaacattatggcgtcatttgatcca 41197271  T
Q  266 tatagt 271  Q
    | ||||    
T  41197270 tgtagt 41197265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 262
Target Start/End: Original strand, 11744567 - 11744758
Alignment:
Q  71 gtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctaga 170  Q
    |||||||| |||||   ||| ||||||||||| |||||| ||||  ||||||||  ||  |||||||||||| || | ||  |||| ||||| || ||||    
T  11744567 gtggtttgagcatgcatagaaaagaccgataggtgttgtagtacgaagagtagaccagcaggaggagagtcggatcaaaagcggtataggaagacataga 11744666  T
Q  171 aaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    ||||| | || | |||||||||  ||||||||| ||||| || | |||||| ||| |||  |||  ||| ||||||||||| ||||||||||    
T  11744667 aaaactataaaaaaaactattatgaaaaatttaaaggttaatgaattgaattcaattataatttatgatcgaacattatgatgtaatttgat 11744758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 25834671 - 25834917
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  | ||||  ||||||       
T  25834671 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtggatgccgttgtaaga 25834770  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | ||||||  ||||    ||| || ||||||||||| |||||| |||||   || |||||| ||||||||  ||||||||||  || |||    
T  25834771 agagtagatcaaatggag--gagttaggttaaaagaggtagaggaagacctaggaaaactttaa-agaaaccattagaaaggatttagaggtcaatgagt 25834867  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||||| ||||  ||||||||| | || ||| |||||||||||    
T  25834868 tggatccaaatatggtttatgatagaacactgtggcgtcatttgatccat 25834917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 31959658 - 31959760
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatc 263  Q
    |||||| ||||| | ||||||||| ||||||||  ||||||||||  || ||||| || ||||||| ||||  ||||||||| |||| | ||||||||||    
T  31959658 acctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcataatttgatc 31959757  T
Q  264 cat 266  Q
    |||    
T  31959758 cat 31959760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 24583874 - 24583733
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacc 166  Q
    |||| |||||||||||||| |||||||||||  |||||| ||| |||   ||||||||| | |||||||||||||   ||| || || |||| ||| ||     
T  24583874 ttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggaggagagtcaagttaaaagagatagatgaagaca 24583775  T
Q  167 tagaaaaaccaaaagagaaactattagaaaaaatttagaggt 208  Q
     | |||||| || |||||||| ||||||||  ||||||||||    
T  24583774 aaaaaaaactaatagagaaaccattagaaaggatttagaggt 24583733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 13592490 - 13592354
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaa-tttagaggttgataag 215  Q
    ||||||||| | || ||||| |||| ||||  || ||||| ||||| |||||||| ||| | |||||||||||| |||||||| |||| || || | |||    
T  13592490 agagtagatcaaatagaggatagtcatatttcaagaggtataggaagacctagaagaactataagagaaactatcagaaaaaagtttatagattaagaag 13592391  T
Q  216 ttgaatacaaatattgttttagatagaacattatgac 252  Q
    ||||||  |||||| ||||  ||||||||| ||||||    
T  13592390 ttgaatttaaatatggtttatgatagaacaatatgac 13592354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 33504360 - 33504463
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggttga-taagttgaatacaaatattgttttagatagaacattatgacgtaatttgat 262  Q
    |||||||||||| | ||||||||||||||  ||| || ||||| || | ||||||| ||  |||||| || |  |||||||||||||| |||||||||||    
T  33504360 acctagaaaaactataagagaaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaatttgat 33504459  T
Q  263 ccat 266  Q
    ||||    
T  33504460 ccat 33504463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 3481181 - 3481255
Alignment:
Q  67 ttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacagagagtagataagatggaggagagtc 141  Q
    ||||||||||||| ||||| ||||||||||| ||||||  ||| | |  |||||||||| |||||||||| ||||    
T  3481181 ttaggtggtttggacatgtagagagaagacctatagattctgtagcaaggagagtagatcagatggaggatagtc 3481255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 42092507 - 42092625
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    |||||||||||||||||   ||| | ||||||||||| || ||| |||  ||||||| | ||||||||| |||||||| |   ||||| |||| |||  |    
T  42092507 agagagagttggggtagcgcctatactagaaaagatggtagaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaagg 42092606  T
Q  117 agagtagataagatggagg 135  Q
    ||||||||| |||||||||    
T  42092607 agagtagattagatggagg 42092625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 43573286 - 43573173
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||||||||| | |||| |||| | ||| ||| ||||| ||||| || ||||| || |||||||  |||  ||| |||| |||||     
T  43573286 aggtagaggaagacctagaaaaactataagaaaaacaactaggaaagattta-aggttaatgagttggatccaaatatgatttatgatcgaacgttatgg 43573188  T
Q  252 cgtaatttgatccat 266  Q
    |||||||||||||||    
T  43573187 cgtaatttgatccat 43573173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9578971 - 9578915
Alignment:
Q  41 agtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||| |||||||||  |||||| | ||||||||||||| ||||| |||||||||||    
T  9578971 agtagtaaagatgatgtaaaatagacttaggtggtttggacatgtagagagaagacc 9578915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 19235178 - 19235102
Alignment:
Q  115 agagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactatt 191  Q
    ||||||||||| ||||||||| |||||  || |  | || |||||||| |||||||||||| | |||||||||||||    
T  19235178 agagagtagatcagatggaggggagtcaaatcactagagatagaggaagacctagaaaaactataagagaaactatt 19235102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 19337020 - 19336936
Alignment:
Q  182 agaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    ||||||||| |  ||| |||||||| || || ||||| ||  |||||| ||||  |||||||||||||| |||||||||||||||    
T  19337020 agaaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccat 19336936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 1249 - 991
Alignment:
Q  8 gacatcatcagagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgtt 107  Q
    |||| ||| |||||||||  |||||| | ||| |||||||||| || || ||||||   |||| |||||||| ||||| |||||||||||  ||||||      
T  1249 gacaccattagagagagtgagggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtagatgcc 1150  T
Q  108 gttgtacagagagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagagg 207  Q
    || |||   ||||||||| | |||||| ||||||  |||| || ||||||||||| |||||| ||||| |  |||||||| |||| |||| |||||||||    
T  1149 gtggtaagaagagtagatcaaatggagaagagtcaaattaaaagaggtagaggaagacctaggaaaactattagagaaaccattaaaaaagatttagagg 1050  T
Q  208 ttgataagttgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    |  || ||||| || ||||| | || |  ||||||||| |||| ||| |||||||||||    
T  1049 tcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccat 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 4726 - 4873
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| ||||||||||||||   |||| || ||||||| |||  | ||| ||||||| ||||||||| ||||||||  ||||||| ||  || |||    
T  4726 agagtagatcagatggaggagagtaagattaaaagaggtagatgaaggcgtaggaaaaccataagagaaaccattagaaaggatttagacgtcaatgagt 4825  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatcc 264  Q
    | ||| ||||||| ||||  ||||||||| |||| |||||||||||||    
T  4826 taaatccaaatatggtttatgatagaacactatggcgtaatttgatcc 4873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 31458 - 31707
Alignment:
Q  17 agagagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagaccgatagatgttgttgtacag 116  Q
    ||||||||| ||||||| | ||| |||||||||| || || ||||||   |||| |||||||||||||| |||||||||||  ||||||   | |||       
T  31458 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccatggtaaga 31557  T
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || | ||||||||| ||| || ||||| |  |||||||| ||||||||  ||||||||||  || |||    
T  31558 agagtagatcaaatggaggagagtcaagttaaaagatgtagaggaagacccaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagt 31657  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccat 266  Q
    || || ||||| | || |  ||||||||| | ||| || |||||||||||    
T  31658 tggatccaaatttggtgtatgatagaacactgtgaagtcatttgatccat 31707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 44158 - 44080
Alignment:
Q  19 agagagttggggtagtagctacagtagaaaagatgatacaaaataaagttaggtggtttgggcatgttgagagaagacc 97  Q
    ||||||||||||||| | ||| |||||||||||||    ||||||   ||||||||||||||||||| |||||||||||    
T  44158 agagagttggggtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagacc 44080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 263
Target Start/End: Original strand, 16703 - 16814
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||  |||||||   ||||||| ||||||||| ||||||||||  || ||||| || ||||||| ||||| ||||||||| ||||     
T  16703 aggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatgg 16802  T
Q  252 cgtaatttgatc 263  Q
    ||| ||||||||    
T  16803 cgtcatttgatc 16814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 82844 - 82957
Alignment:
Q  152 aggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagttgaatacaaatattgttttagatagaacattatga 251  Q
    ||||||||||| |||||| ||||| | | ||||||| ||||||||  ||||||||||  || ||||| || |||||||  |||  ||||||||| |||||    
T  82844 aggtagaggaagacctaggaaaactata-gagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatgatttatgatagaacactatga 82942  T
Q  252 cgtaatttgatccat 266  Q
    ||| |||||||||||    
T  82943 cgtcatttgatccat 82957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 117 - 271
Target Start/End: Complemental strand, 86801 - 86647
Alignment:
Q  117 agagtagataagatggaggagagtcgtattagaataggtagaggaatacctagaaaaaccaaaagagaaactattagaaaaaatttagaggttgataagt 216  Q
    ||||||||| | |||||||||||||   ||| || ||||||| | | |||||| |||||    |||||||| | ||||||  |||||||||| || | ||    
T  86801 agagtagatcaaatggaggagagtcaggttaaaagaggtagatggagacctaggaaaactgttagagaaaccactagaaaggatttagaggtcgacaggt 86702  T
Q  217 tgaatacaaatattgttttagatagaacattatgacgtaatttgatccatatagt 271  Q
    || || |||||||  | |  ||||||||| |||||||||||||||||||| ||||    
T  86701 tggatccaaatatgatgtatgatagaacactatgacgtaatttgatccatgtagt 86647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 1664 - 1619
Alignment:
Q  164 acctagaaaaaccaaaagagaaactattagaaaaaatttagaggtt 209  Q
    |||||||||||| | ||||||||||||||||||| ||||| |||||    
T  1664 acctagaaaaactataagagaaactattagaaaagatttaaaggtt 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 21299 - 21344
Alignment:
Q  224 aaatattgttttagatagaacattatgacgtaatttgatccatata 269  Q
    |||||| || || ||| |||||||||||||||||||||||||||||    
T  21299 aaatatggtcttggattgaacattatgacgtaatttgatccatata 21344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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