View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18315_low_77 (Length: 266)
Name: NF18315_low_77
Description: NF18315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18315_low_77 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 46228817 - 46229052
Alignment:
| Q |
14 |
catcataacagtaaagtactaaatgataaactcatcaaatttctaaagctttagtgttttggctcacaaagttaatgtggacataactaagagcttggtg |
113 |
Q |
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| T |
46228817 |
catcataacagtaaagtactaaatgataaactcctcaaatttctaaagctttagtgttttggctcacaaagttaatgtggacataactaagagcttggtg |
46228916 |
T |
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| Q |
114 |
cataaccaacaacgtcaaatagaccacctgtcaatctgtaatccacttaacaatctacaacatggcataaaaatcaagtttaatggtggttcactgaaaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46228917 |
cataaccaacaacgtcaaatagaccacctgtcaatctgtaatccacttaacaatctacaacatggcataaaaatcaagtttaatggtggttcactgaaaa |
46229016 |
T |
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| Q |
214 |
ttattttacagagttagccaatcaaatttcattctt |
249 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
46229017 |
ttattttacagagttagccaatcaaatttcattctt |
46229052 |
T |
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