View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_high_121 (Length: 219)
Name: NF18317_high_121
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_high_121 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 50491492 - 50491682
Alignment:
| Q |
5 |
caaccaacaccttatactccataagtcattataagccaagaactcaaccaacaataaatctaagtatttctccctaactcgtttaaaataagcatataac |
104 |
Q |
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| T |
50491492 |
caaccaacaccttatacttcataagtcattataagccaagaactcaaccaacaataaatctaagtatttctccctaactcgcttaaaataagcatataac |
50491591 |
T |
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| Q |
105 |
tgttaaccagggcgaattgtgatatatcctaatccatgttcattctcaagaacaatcagaaaaaccgtcactgacaaagagtgaagttacc |
195 |
Q |
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| T |
50491592 |
tgttaaccagggcgaattgtgatatatcctaatccatgttcattctcaagaacaatcagaaaaaacgtcactaacaaagagtgaagttacc |
50491682 |
T |
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