View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18317_high_54 (Length: 338)

Name: NF18317_high_54
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18317_high_54
NF18317_high_54
[»] chr7 (54 HSPs)
chr7 (5-183)||(24213514-24213704)
chr7 (191-302)||(39520794-39520904)
chr7 (192-302)||(42896997-42897106)
chr7 (199-302)||(36202788-36202891)
chr7 (191-302)||(47238617-47238728)
chr7 (191-302)||(25969391-25969512)
chr7 (191-302)||(27353915-27354036)
chr7 (191-302)||(48163402-48163523)
chr7 (191-302)||(554890-555001)
chr7 (191-302)||(40095644-40095765)
chr7 (192-302)||(11829684-11829804)
chr7 (190-302)||(34238151-34238273)
chr7 (191-302)||(38262993-38263114)
chr7 (192-302)||(27555369-27555489)
chr7 (205-302)||(9250422-9250529)
chr7 (194-302)||(1043071-1043189)
chr7 (194-302)||(34122617-34122735)
chr7 (191-302)||(16850780-16850901)
chr7 (192-302)||(4291507-4291616)
chr7 (194-302)||(16564379-16564476)
chr7 (194-302)||(16601186-16601283)
chr7 (194-302)||(27398047-27398165)
chr7 (191-302)||(26773712-26773833)
chr7 (192-302)||(19510518-19510638)
chr7 (116-183)||(24213823-24213890)
chr7 (116-183)||(24213915-24213982)
chr7 (202-302)||(26845896-26846006)
chr7 (191-302)||(21409385-21409506)
chr7 (192-266)||(23079086-23079160)
chr7 (194-283)||(15878374-15878462)
chr7 (116-185)||(24214007-24214076)
chr7 (192-302)||(44960135-44960255)
chr7 (193-302)||(47720172-47720277)
chr7 (191-254)||(11058346-11058409)
chr7 (116-183)||(24213729-24213796)
chr7 (194-302)||(35159862-35159980)
chr7 (192-254)||(33454065-33454127)
chr7 (232-302)||(36660523-36660593)
chr7 (116-177)||(24214099-24214160)
chr7 (194-302)||(35136056-35136164)
chr7 (204-302)||(7416631-7416729)
chr7 (203-302)||(49015070-49015175)
chr7 (194-254)||(36758054-36758114)
chr7 (194-254)||(36767578-36767638)
chr7 (194-302)||(1363012-1363130)
chr7 (256-299)||(8028766-8028809)
chr7 (195-254)||(18113997-18114055)
chr7 (211-302)||(23311736-23311837)
chr7 (192-266)||(38064590-38064664)
chr7 (204-302)||(8056334-8056438)
chr7 (191-236)||(24956244-24956290)
chr7 (192-241)||(26973062-26973111)
chr7 (200-249)||(44269729-44269778)
chr7 (262-302)||(40041454-40041494)
[»] chr3 (56 HSPs)
chr3 (191-302)||(22611384-22611495)
chr3 (194-302)||(53192498-53192606)
chr3 (191-302)||(10225162-10225272)
chr3 (190-302)||(40497326-40497448)
chr3 (194-302)||(1528502-1528610)
chr3 (191-302)||(7327709-7327830)
chr3 (192-302)||(35389748-35389868)
chr3 (191-302)||(37996811-37996932)
chr3 (190-302)||(2567398-2567509)
chr3 (191-302)||(1679698-1679819)
chr3 (192-302)||(19879103-19879213)
chr3 (191-302)||(55269016-55269133)
chr3 (194-302)||(47642017-47642124)
chr3 (189-302)||(48122820-48122943)
chr3 (192-302)||(22310703-22310823)
chr3 (192-300)||(42464909-42465027)
chr3 (191-302)||(52121177-52121298)
chr3 (193-302)||(28882678-28882797)
chr3 (190-302)||(28704723-28704845)
chr3 (204-302)||(5271489-5271587)
chr3 (191-302)||(52505833-52505953)
chr3 (192-301)||(21006496-21006605)
chr3 (194-302)||(19349600-19349708)
chr3 (191-266)||(41742118-41742193)
chr3 (194-266)||(13748493-13748565)
chr3 (194-302)||(6134382-6134500)
chr3 (194-301)||(22289722-22289839)
chr3 (191-302)||(30787562-30787683)
chr3 (193-250)||(19420904-19420961)
chr3 (202-301)||(13353197-13353296)
chr3 (195-266)||(28968511-28968582)
chr3 (192-257)||(29915859-29915924)
chr3 (192-257)||(29965012-29965077)
chr3 (194-266)||(30226420-30226492)
chr3 (193-302)||(52684200-52684319)
chr3 (190-302)||(25937064-25937185)
chr3 (202-301)||(983202-983311)
chr3 (192-302)||(2122702-2122825)
chr3 (192-266)||(42229672-42229746)
chr3 (256-302)||(45532980-45533026)
chr3 (212-302)||(3983715-3983815)
chr3 (191-230)||(33238720-33238759)
chr3 (192-266)||(21157775-21157849)
chr3 (256-302)||(33240022-33240068)
chr3 (204-257)||(49419245-49419298)
chr3 (190-254)||(38889138-38889201)
chr3 (190-266)||(45347295-45347369)
chr3 (256-302)||(19421488-19421534)
chr3 (205-254)||(47750948-47750997)
chr3 (234-302)||(53165509-53165577)
chr3 (203-257)||(20510211-20510265)
chr3 (256-302)||(28968582-28968628)
chr3 (256-302)||(41742072-41742118)
chr3 (257-302)||(7899719-7899764)
chr3 (261-302)||(45347374-45347415)
chr3 (191-266)||(25700759-25700832)
[»] chr4 (39 HSPs)
chr4 (193-302)||(3403585-3403694)
chr4 (194-302)||(38492269-38492377)
chr4 (190-302)||(19738693-19738815)
chr4 (191-302)||(52122869-52122990)
chr4 (191-302)||(5834827-5834948)
chr4 (194-302)||(8064109-8064227)
chr4 (190-302)||(42472569-42472691)
chr4 (191-302)||(28376993-28377114)
chr4 (191-302)||(41145609-41145730)
chr4 (192-302)||(53322335-53322455)
chr4 (191-297)||(14795020-14795115)
chr4 (194-302)||(5325721-5325839)
chr4 (223-302)||(36943708-36943787)
chr4 (204-302)||(52721274-52721382)
chr4 (194-266)||(2586336-2586408)
chr4 (194-266)||(55901185-55901257)
chr4 (194-302)||(40694070-40694188)
chr4 (194-257)||(52572210-52572273)
chr4 (194-266)||(1176981-1177053)
chr4 (191-266)||(10257697-10257772)
chr4 (190-302)||(46431933-46432054)
chr4 (191-249)||(47607107-47607165)
chr4 (194-266)||(17892248-17892320)
chr4 (194-266)||(36511980-36512052)
chr4 (194-266)||(44121888-44121960)
chr4 (204-295)||(21058843-21058944)
chr4 (193-255)||(31946262-31946324)
chr4 (256-302)||(39957636-39957682)
chr4 (194-302)||(21637665-21637783)
chr4 (256-302)||(4400540-4400586)
chr4 (194-255)||(36561771-36561831)
chr4 (192-302)||(37992533-37992653)
chr4 (196-245)||(51858834-51858883)
chr4 (203-254)||(27981905-27981956)
chr4 (192-255)||(51674856-51674919)
chr4 (202-232)||(726624-726654)
chr4 (202-232)||(754190-754220)
chr4 (240-302)||(4119505-4119567)
chr4 (273-302)||(52572278-52572307)
[»] chr5 (38 HSPs)
chr5 (191-302)||(12852116-12852226)
chr5 (191-302)||(26795004-26795114)
chr5 (191-302)||(32707831-32707952)
chr5 (191-302)||(39690763-39690884)
chr5 (190-302)||(6243169-6243280)
chr5 (194-302)||(33829753-33829871)
chr5 (191-302)||(1639782-1639903)
chr5 (191-302)||(9792316-9792437)
chr5 (191-302)||(30777522-30777643)
chr5 (192-302)||(32624875-32624995)
chr5 (194-302)||(30284607-30284725)
chr5 (194-302)||(41392712-41392830)
chr5 (191-266)||(10656817-10656892)
chr5 (192-300)||(30918376-30918494)
chr5 (194-302)||(7629070-7629177)
chr5 (192-266)||(1795390-1795464)
chr5 (191-302)||(26716270-26716391)
chr5 (191-302)||(26986010-26986131)
chr5 (196-302)||(11906220-11906336)
chr5 (190-302)||(32728709-32728831)
chr5 (196-302)||(26691618-26691734)
chr5 (196-302)||(26961350-26961466)
chr5 (239-302)||(7977296-7977359)
chr5 (195-302)||(17138254-17138370)
chr5 (192-266)||(5612488-5612562)
chr5 (195-265)||(42366150-42366220)
chr5 (194-302)||(3934788-3934906)
chr5 (191-266)||(5721985-5722059)
chr5 (192-266)||(22774552-22774626)
chr5 (204-265)||(15066148-15066209)
chr5 (262-302)||(5986068-5986108)
chr5 (203-254)||(14836390-14836441)
chr5 (200-291)||(22737862-22737948)
chr5 (260-302)||(21251541-21251583)
chr5 (201-255)||(27938170-27938224)
chr5 (256-302)||(34032441-34032487)
chr5 (192-257)||(35746306-35746371)
chr5 (203-255)||(41233388-41233440)
[»] chr8 (40 HSPs)
chr8 (194-302)||(32638866-32638974)
chr8 (190-302)||(16384613-16384735)
chr8 (192-302)||(2872910-2873030)
chr8 (194-302)||(12357889-12357996)
chr8 (194-302)||(12359017-12359124)
chr8 (191-301)||(5539433-5539541)
chr8 (191-302)||(13422205-13422326)
chr8 (191-302)||(32759370-32759491)
chr8 (191-302)||(32877434-32877555)
chr8 (191-302)||(34901382-34901503)
chr8 (191-302)||(36483432-36483553)
chr8 (191-302)||(43771704-43771825)
chr8 (191-302)||(22201337-22201458)
chr8 (191-302)||(28876566-28876687)
chr8 (190-302)||(4245936-4246058)
chr8 (191-302)||(6028484-6028605)
chr8 (191-302)||(12580553-12580674)
chr8 (192-302)||(25022123-25022243)
chr8 (191-302)||(45217220-45217341)
chr8 (192-273)||(40412433-40412514)
chr8 (192-266)||(19436272-19436346)
chr8 (192-266)||(19572421-19572495)
chr8 (191-301)||(37372256-37372376)
chr8 (194-266)||(7411636-7411708)
chr8 (201-257)||(32424928-32424984)
chr8 (196-292)||(19948006-19948112)
chr8 (191-302)||(37668579-37668700)
chr8 (192-302)||(27886188-27886308)
chr8 (192-302)||(27944846-27944966)
chr8 (199-257)||(5818366-5818424)
chr8 (188-266)||(38388661-38388739)
chr8 (191-266)||(32678-32753)
chr8 (191-254)||(29355620-29355683)
chr8 (261-302)||(42949207-42949248)
chr8 (194-257)||(27968103-27968166)
chr8 (194-257)||(28025089-28025152)
chr8 (194-237)||(28737255-28737298)
chr8 (239-302)||(8171239-8171297)
chr8 (200-249)||(20182380-20182429)
chr8 (192-221)||(41099377-41099406)
[»] scaffold0177 (1 HSPs)
scaffold0177 (191-302)||(25541-25651)
[»] scaffold0037 (1 HSPs)
scaffold0037 (191-302)||(27791-27902)
[»] chr1 (45 HSPs)
chr1 (191-302)||(36367702-36367813)
chr1 (194-302)||(20409554-20409672)
chr1 (191-302)||(1043224-1043345)
chr1 (191-302)||(28949241-28949362)
chr1 (191-302)||(6916874-6916995)
chr1 (191-302)||(8132180-8132301)
chr1 (191-302)||(37346848-37346969)
chr1 (191-302)||(38330424-38330545)
chr1 (191-302)||(52895713-52895834)
chr1 (194-302)||(37104120-37104238)
chr1 (191-302)||(1036456-1036577)
chr1 (191-302)||(3426845-3426966)
chr1 (195-302)||(5984228-5984345)
chr1 (191-302)||(13012992-13013113)
chr1 (191-302)||(43189652-43189773)
chr1 (191-302)||(38948729-38948850)
chr1 (190-266)||(9781638-9781714)
chr1 (191-302)||(30323712-30323833)
chr1 (191-302)||(31653402-31653523)
chr1 (192-302)||(25256614-25256734)
chr1 (203-302)||(28659300-28659409)
chr1 (208-301)||(9092494-9092587)
chr1 (194-302)||(24590124-24590233)
chr1 (190-266)||(2364673-2364749)
chr1 (190-266)||(2472900-2472976)
chr1 (191-254)||(34096610-34096673)
chr1 (191-257)||(29167944-29168010)
chr1 (196-266)||(41676035-41676105)
chr1 (200-302)||(38218404-38218501)
chr1 (190-249)||(34432446-34432505)
chr1 (192-266)||(3708325-3708399)
chr1 (192-254)||(14167082-14167144)
chr1 (192-242)||(24849362-24849412)
chr1 (194-250)||(10822402-10822458)
chr1 (259-302)||(14334235-14334278)
chr1 (192-300)||(48715227-48715345)
chr1 (192-266)||(29861799-29861873)
chr1 (196-250)||(40775997-40776051)
chr1 (208-257)||(9528894-9528943)
chr1 (191-232)||(14334169-14334209)
chr1 (196-302)||(32381059-32381175)
chr1 (195-243)||(36551492-36551540)
chr1 (199-257)||(33039618-33039676)
chr1 (194-271)||(8829751-8829826)
chr1 (262-302)||(34432383-34432423)
[»] chr2 (41 HSPs)
chr2 (189-302)||(20536770-20536883)
chr2 (190-302)||(7876710-7876832)
chr2 (191-302)||(38602322-38602443)
chr2 (191-302)||(4170502-4170623)
chr2 (191-302)||(33324815-33324936)
chr2 (192-302)||(6497649-6497769)
chr2 (191-302)||(16561797-16561918)
chr2 (191-302)||(40308897-40309018)
chr2 (191-302)||(6124170-6124291)
chr2 (191-302)||(7807374-7807495)
chr2 (191-302)||(18300969-18301090)
chr2 (192-302)||(45159308-45159418)
chr2 (194-302)||(22484267-22484385)
chr2 (194-301)||(3563851-3563957)
chr2 (191-282)||(12819298-12819388)
chr2 (191-266)||(28746698-28746773)
chr2 (194-301)||(22570937-22571054)
chr2 (190-266)||(4561784-4561860)
chr2 (194-266)||(35342317-35342389)
chr2 (194-302)||(4355325-4355443)
chr2 (192-302)||(14824146-14824256)
chr2 (191-264)||(1776484-1776557)
chr2 (193-257)||(1005512-1005576)
chr2 (193-302)||(2319274-2319393)
chr2 (194-302)||(40536242-40536350)
chr2 (190-257)||(5588103-5588170)
chr2 (194-302)||(44156597-44156715)
chr2 (194-257)||(24585530-24585592)
chr2 (194-302)||(34146180-34146298)
chr2 (191-298)||(31236190-31236307)
chr2 (194-254)||(14217212-14217272)
chr2 (194-254)||(43214572-43214632)
chr2 (189-283)||(15880443-15880537)
chr2 (196-254)||(37134356-37134414)
chr2 (256-302)||(40497385-40497431)
chr2 (194-254)||(21104482-21104542)
chr2 (200-254)||(8482975-8483029)
chr2 (191-301)||(45158134-45158244)
chr2 (189-250)||(25933560-25933621)
chr2 (193-257)||(12206024-12206088)
chr2 (202-257)||(35996651-35996706)
[»] scaffold0112 (1 HSPs)
scaffold0112 (194-302)||(42076-42183)
[»] scaffold0640 (1 HSPs)
scaffold0640 (191-302)||(8092-8213)
[»] scaffold0406 (1 HSPs)
scaffold0406 (190-302)||(13862-13974)
[»] chr6 (22 HSPs)
chr6 (191-302)||(1036826-1036947)
chr6 (191-301)||(10894584-10894693)
chr6 (191-302)||(3212474-3212595)
chr6 (194-302)||(8356958-8357076)
chr6 (192-302)||(32130659-32130779)
chr6 (191-266)||(26327152-26327227)
chr6 (194-302)||(7188779-7188894)
chr6 (192-301)||(7254928-7255037)
chr6 (191-301)||(27083982-27084102)
chr6 (204-302)||(31195869-31195977)
chr6 (194-266)||(234306-234378)
chr6 (194-302)||(31079612-31079719)
chr6 (192-266)||(6708087-6708161)
chr6 (201-302)||(31741168-31741267)
chr6 (203-266)||(32017986-32018049)
chr6 (192-302)||(25834496-25834616)
chr6 (192-257)||(3299139-3299204)
chr6 (194-266)||(19128153-19128225)
chr6 (194-254)||(29892966-29893026)
chr6 (194-257)||(13607840-13607903)
chr6 (200-254)||(13061363-13061417)
chr6 (194-255)||(11105286-11105347)
[»] scaffold0250 (1 HSPs)
scaffold0250 (191-302)||(5509-5630)
[»] scaffold0005 (1 HSPs)
scaffold0005 (191-297)||(44616-44711)
[»] scaffold0060 (1 HSPs)
scaffold0060 (191-302)||(30444-30565)
[»] scaffold0285 (1 HSPs)
scaffold0285 (196-257)||(13252-13313)
[»] scaffold0240 (1 HSPs)
scaffold0240 (192-266)||(10598-10672)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 6e-65; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 24213514 - 24213704
Alignment:
Q  5 gtggcagtcacacatacaaacattaataagaactggtttgcaatgttgtatcttctaggtttacaaatgtaaatttagataattggttttgctctgcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  24213514 gtggcagtcacacatacaaacattaataagaactggtttgcaatgttgtatcttctaggtttacaaatataaatttagataattggttttgctctacaaa 24213613  T
Q  105 aagttagcggc------------aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 183  Q
    |||||||||||            |||||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  24213614 aagttagcggcgcatttgtttgtaattttcttgaatagttaagtaacttgaagtagcgaaatagttgttggctttaaaaatctcagcttag 24213704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 39520794 - 39520904
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39520794 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-cttcccgatacgtatccggagagtatccaaatatt 39520892  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  39520893 aaattttatttt 39520904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 42896997 - 42897106
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42896997 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-cttcccgatacgtatccggagagtatccaaatatta 42897095  T
Q  292 aattttatttt 302  Q
    |||||||||||    
T  42897096 aattttatttt 42897106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 36202891 - 36202788
Alignment:
Q  199 ccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaatttta 298  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  36202891 ccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctgcccgatacgtatccggagagtatccaaatattaaatttta 36202792  T
Q  299 tttt 302  Q
    ||||    
T  36202791 tttt 36202788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 47238728 - 47238617
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||  ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  47238728 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctgcccgatatgtatctggagagtatccaaatatt 47238629  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  47238628 aaattttatttt 47238617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 25969391 - 25969512
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  25969391 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 25969490  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  25969491 tccaaatattaaattttatttt 25969512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 27353915 - 27354036
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  27353915 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 27354014  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  27354015 tccaaatattaaattttatttt 27354036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 48163402 - 48163523
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  48163402 ctgtgaagccccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 48163501  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  48163502 tccaaatattaaattttatttt 48163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 555001 - 554890
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | || |||    
T  555001 ctgtgaagccccgatactctaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgataccttcctgatacgtatcaggagagtattcgaagatt 554902  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  554901 aaattttatttt 554890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 40095644 - 40095765
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  40095644 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 40095743  T
Q  281 tccaaatattaaattttatttt 302  Q
    || |||||||||||||||||||    
T  40095744 tctaaatattaaattttatttt 40095765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 11829684 - 11829804
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           |||||| |||||||||||||||||||    
T  11829684 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagtat 11829783  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  11829784 ccaaatattaaattttatttt 11829804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 34238151 - 34238273
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||          ||| ||||||||||| ||||||||    
T  34238151 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagt 34238250  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  34238251 atccaaatattaaattttatttt 34238273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 38262993 - 38263114
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||          ||| |||||||||||||||||||||    
T  38262993 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggagagta 38263092  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  38263093 tccaaatattaaattttatttt 38263114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 27555489 - 27555369
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtat 281  Q
    |||||||||| ||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||          ||||||||||||||||||||||||    
T  27555489 tgtgaagccctgatacttcaaaatggatgacgtaccgtattctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtat 27555390  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  27555389 ccaaatattaaattttatttt 27555369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 302
Target Start/End: Complemental strand, 9250529 - 9250422
Alignment:
Q  205 tacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaat 294  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaat 9250430  T
Q  295 tttatttt 302  Q
    ||||||||    
T  9250429 tttatttt 9250422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 1043189 - 1043071
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||          ||| |||||||||||| |||||||||||    
T  1043189 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatcc 1043090  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  1043089 aaatattaaattttatttt 1043071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 34122735 - 34122617
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||| |||||||||||    
T  34122735 tgaagcctagatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 34122636  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  34122635 aaatattaaattttatttt 34122617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 16850780 - 16850901
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||          ||| |||||||||||| | ||||||    
T  16850780 ctgtgaagccccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaagagta 16850879  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  16850880 tccaaatattaaattttatttt 16850901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 4291507 - 4291616
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggaga-gtatccaaatatt 290  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||   ||| || | |||||||||||||    
T  4291507 tgtgaagccccgatactttaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatac--ttcccgatacgtatccaaatatt 4291604  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  4291605 aaattttatttt 4291616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 16564476 - 16564379
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||| |||||||||||||||||||||    
T  16564476 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc-----------cccgatacgtatcgggagagtatccaaatattaaa 16564388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 16601186 - 16601283
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||| |||||||||||||||||||||    
T  16601186 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc-----------cccgatacgtatcgggagagtatccaaatattaaa 16601274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 27398165 - 27398047
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac----------gtatccggagagtatcc 283  Q
    |||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||| | ||||||          |||||||||||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatcc 27398066  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  27398065 aaatattaaattttatttt 27398047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 26773833 - 26773712
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||| || ||||||||||||||||           |||| ||||||||||| ||||||||    
T  26773833 ctgtgaagccccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcgggagagta 26773734  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  26773733 tccaaatattaaattttatttt 26773712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 19510518 - 19510638
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||          ||||| |||| ||||| || ||||||    
T  19510518 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgcactgatacatgcccgatacttcctgatatgtatcgggtgagtat 19510617  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  19510618 ccaaatattaaattttatttt 19510638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24213823 - 24213890
Alignment:
Q  116 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 183  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||| ||||||||    
T  24213823 aattttcttgaatagtaaagtaacttgaattagagaaacaattcttggctttaaaaatcccagcttag 24213890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24213915 - 24213982
Alignment:
Q  116 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 183  Q
    |||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24213915 aattttcttgaagagtcaagtaaattgaattagcgaaacagttcttggctttaaaaatctcagcttag 24213982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 26846006 - 26845896
Alignment:
Q  202 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatatta 291  Q
    |||||||||||||||||||| |||||||||| | || |||||||||||||||||          |||||||||||||||  |||||||||||||||||||    
T  26846006 cgatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatacctgcccaatacttcccgatacgtatttggagagtatccaaatatta 26845907  T
Q  292 aattttatttt 302  Q
    |||||||||||    
T  26845906 aattttatttt 26845896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 21409385 - 21409506
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagta 280  Q
    |||||||||||  |||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||          |||||||||||||| ||||||||    
T  21409385 ctgtgaagccctcatacttaaaaatggatgacgtatcgtatctcctgtatatcctgcactgatacctgcctgatacatcccgatacgtatcaggagagta 21409484  T
Q  281 tccaaatattaaattttatttt 302  Q
    |||||| |||||||||||||||    
T  21409485 tccaaagattaaattttatttt 21409506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 23079160 - 23079086
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| | |||||||| ||||||||    
T  23079160 tgtgtagccccgatacttcaaaatggatgacataccgtatcccctgcgtatcctggatcgatacctacccgatac 23079086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 15878462 - 15878374
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatcc 283  Q
    ||||||||||||||||||||| |||||| ||||||||||||||  |||||||  ||||||| ||| |||||||||||| |||||||||||    
T  15878462 tgaagccccgatacttcaaaacggatgatgtaccgtatcccctacgtatcctataccgata-ctttccgatacgtatcaggagagtatcc 15878374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 24214007 - 24214076
Alignment:
Q  116 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttagtg 185  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||| |||||||    
T  24214007 aattttcttgaatagtcaagtaacttgaattagcaaaacagttcttggctttataaatctcaacttagtg 24214076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 44960255 - 44960135
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||          |||||||||| ||||| | |||||||    
T  44960255 tgtgaagctccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgacacctgtctgatacttcccgatatgtatcagaagagtat 44960156  T
Q  282 ccaaatattaaattttatttt 302  Q
    ||||| |||||||||||||||    
T  44960155 ccaaagattaaattttatttt 44960135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 47720277 - 47720172
Alignment:
Q  193 gtgaagccccgatacttcaa---aatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 289  Q
    ||||||||||||||||||||   ||||||||||| | ||||||||       || |||||||||  |||||||||||||||||||||||||||| |||||    
T  47720277 gtgaagccccgatacttcaacaaaatggatgacgaatcgtatccc-------tcttgcaccgattacttcccgatacgtatccggagagtatccgaatat 47720185  T
Q  290 taaattttatttt 302  Q
    |||||||||||||    
T  47720184 taaattttatttt 47720172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 11058346 - 11058409
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    |||||||| || | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11058346 ctgtgaagtccaggtacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 11058409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24213729 - 24213796
Alignment:
Q  116 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctcagcttag 183  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  24213729 aatttttttgaatagtcaagtaacttgaattagcgaaacagttcttgacgttaaaaatctcagcttag 24213796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 35159862 - 35159980
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||  ||| ||||||||||||          |||||||||||||||| |||||||||||    
T  35159862 tgaagctccgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcaccgatacttgtctaatacttcccgatacgtatcaggagagtatcc 35159961  T
Q  284 aaatattaaattttatttt 302  Q
     || |||||||||||||||    
T  35159962 gaagattaaattttatttt 35159980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 33454065 - 33454127
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  33454065 tgtgaagccccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgata 33454127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 36660523 - 36660593
Alignment:
Q  232 cccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||| ||||||||||||| ||||||  ||||||||||||| |||||||| ||||||||||||||||||||    
T  36660523 cccctatgtatcctgcaccaatacctgtccgatacgtatccagagagtattcaaatattaaattttatttt 36660593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 24214099 - 24214160
Alignment:
Q  116 aattttcttgaatagtaaagtaacttgaattagcgaaacagttattggctttaaaaatctca 177  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||| |||||||||||||    
T  24214099 aattttcttgaatagtcaaataacttgaattagcgaaacaattattggttttaaaaatctca 24214160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 35136056 - 35136164
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||| | ||||||||||||||| |||||||||||||  |||| ||||| |||||||||| || ||||||||||||  | ||||||||  |  ||||||    
T  35136056 tgaagctcggatacttcaaaatgggtgacgtaccgtatttcctgggtatcttgcaccgatatctgcccgatacgtattggaagagtatcatatcattaaa 35136155  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  35136156 ttttatttt 35136164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 7416631 - 7416729
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||||| |||  |||||  || |||||| |||| ||||| || || |||||||||| ||||||||||| || |||||||||||||||    
T  7416631 atacttcaaaatggatgatgtattgtatcttctatgtatcttgcatcgatatctgcctgatacgtatcaggagagtatccgaagattaaattttatttt 7416729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 49015175 - 49015070
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct-tc-----ccgatacgtatccggagagtatccaaatattaaattt 296  Q
    |||||||||||||||||||| ||||||||| | |||||||| | ||||||||||| ||     |||||||||||| | |||||||||||  |||||||||    
T  49015175 gatacttcaaaatggatgacataccgtatctcatgtgtatcatacaccgatacctgtctgaatccgatacgtatcagaagagtatccaacgattaaattt 49015076  T
Q  297 tatttt 302  Q
    ||||||    
T  49015075 tatttt 49015070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 36758114 - 36758054
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||| |||| |||||||||||    
T  36758114 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 36767638 - 36767578
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||| |||| |||||||||||    
T  36767638 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36767578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 1363130 - 1363012
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    ||||| || ||||||||||||||||||| | ||  ||||||||||||||| ||||| |||||          |||| ||||||||||| |||||||||||    
T  1363130 tgaagtccagatacttcaaaatggatgatgaacattatcccctgtgtatcttgcactgatacatgcttgatacttctcgatacgtatcaggagagtatcc 1363031  T
Q  284 aaatattaaattttatttt 302  Q
     ||||| ||||||||||||    
T  1363030 gaatatgaaattttatttt 1363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 8028766 - 8028809
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttat 299  Q
    ||||| |||||||||| |||||||||||||||||||||||||||    
T  8028766 cttcctgatacgtatcgggagagtatccaaatattaaattttat 8028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 18114055 - 18113997
Alignment:
Q  195 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||| |||| |||||||||||||||||||| ||||| || |||||||||||||||||    
T  18114055 gaagcccagata-ttcaaaatggatgacgtaccatatcctctatgtatcctgcaccgata 18113997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 23311736 - 23311837
Alignment:
Q  211 aaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtatccaaatattaaattttatt 300  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||           |||||||||| ||||| ||||||||||| || |||||||||||||    
T  23311736 aaaatagatgatgtaccgtatcccatgtgtatcctgcaccgatatatgtctgatacttcccgatatgtatcaggagagtatccgaagattaaattttatt 23311835  T
Q  301 tt 302  Q
    ||    
T  23311836 tt 23311837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 38064590 - 38064664
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||| |||||||||||| || |||||| | || ||||| ||||| |||||||  |||||||    
T  38064590 tgtgaagccccgatactttaaaatggatgacataacgtatctcatgcgtatcatgcactgatacctgaccgatac 38064664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 8056438 - 8056334
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgat------accttcccgatacgtatccggagagtatccaaatattaaatttt 297  Q
    ||||||||||||||||||||||||||||||  || ||||| || ||||||        ||| |||||||||||| ||||||||||  || ||||||||||    
T  8056438 atacttcaaaatggatgacgtaccgtatcctttgcgtatcttgtaccgatgtctggtactttccgatacgtatcaggagagtatctgaagattaaatttt 8056339  T
Q  298 atttt 302  Q
    |||||    
T  8056338 atttt 8056334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 24956244 - 24956290
Alignment:
Q  191 ctgtgaagcccc-gatacttcaaaatggatgacgtaccgtatcccct 236  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  24956244 ctgtgaagccccagatacttcaaaattgatgacgtatcgtatcccct 24956290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 26973062 - 26973111
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgta 241  Q
    |||||||||| ||||||| ||||| | ||||||| |||||||||||||||    
T  26973062 tgtgaagccctgatactttaaaatagttgacgtatcgtatcccctgtgta 26973111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 44269729 - 44269778
Alignment:
Q  200 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 249  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||||||    
T  44269729 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgcac 44269778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 40041454 - 40041494
Alignment:
Q  262 gatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||| ||||||||||| || |||||||||||||||    
T  40041454 gatacgtatcaggagagtatccgaagattaaattttatttt 40041494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 22611495 - 22611384
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22611495 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctgcccgatacgtatccggagagtatccaaatatt 22611396  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  22611395 aaattttatttt 22611384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 53192498 - 53192606
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53192498 tgaagccccgatacttcaaaatggatgacgtaccgtataccctgagtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 53192597  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  53192598 ttttatttt 53192606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 10225272 - 10225162
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  10225272 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata-ctttccgatacgtatccggagagtatccaaatatt 10225174  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  10225173 aaattttatttt 10225162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 40497326 - 40497448
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||    
T  40497326 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagt 40497425  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  40497426 atccaaatattaaattttatttt 40497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 1528502 - 1528610
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||| ||||||||||||||||||||||||| | ||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1528502 tgaagctccgatacttcaaaatggatgacgtatcatatcccctgcgtatcatgcatcgatacctgcccgatacgtatccggagagtatccaaatattaaa 1528601  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  1528602 ttttatttt 1528610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 7327709 - 7327830
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||| ||||    
T  7327709 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagta 7327808  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  7327809 tccaaatattaaattttatttt 7327830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 35389748 - 35389868
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| |||||||||    
T  35389748 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtat 35389847  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  35389848 ccaaatattaaattttatttt 35389868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 37996932 - 37996811
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||          ||||||||||||||||||||||||    
T  37996932 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagta 37996833  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  37996832 tccaaatattaaattttatttt 37996811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 2567509 - 2567398
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 289  Q
    ||||||||  |||||||||||||||||||||||||| |||||  |||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  2567509 actgtgaaatcccgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgata-cttcccgatacgtatccagagagtatccgaatat 2567411  T
Q  290 taaattttatttt 302  Q
    |||||||||||||    
T  2567410 taaattttatttt 2567398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 1679819 - 1679698
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||||          |||||||||||||||||||||||||    
T  1679819 ctgtgaagccccgatacttcaaaatggataacgtaccgtatccactgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 1679720  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  1679719 tccaaatattaaattttatttt 1679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 19879213 - 19879103
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||  ||||||||||| || |||     
T  19879213 tgtgaagccgcaatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatatgtataaggagagtatccgaagattc 19879114  T
Q  292 aattttatttt 302  Q
    |||||||||||    
T  19879113 aattttatttt 19879103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 55269133 - 55269016
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac------cttcccgatacgtatccggagagtatcca 284  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||      |||||||||||||||| |||||||||||     
T  55269133 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgatacttcccgatacgtatcaggagagtatccg 55269034  T
Q  285 aatattaaattttatttt 302  Q
    || |||||||||||||||    
T  55269033 aagattaaattttatttt 55269016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 47642017 - 47642124
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||||||||| | ||||||||| || ||||||    
T  47642017 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcaccgata-cttcccaatacgtatcagaagagtatccgaagattaaa 47642115  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  47642116 ttttatttt 47642124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 189 - 302
Target Start/End: Original strand, 48122820 - 48122943
Alignment:
Q  189 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagag 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||           |||||||||||||||| |||||    
T  48122820 cactctgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagag 48122919  T
Q  279 tatccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||||    
T  48122920 tatccaaatattaaattttatttt 48122943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 22310703 - 22310823
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||   |||||||    
T  22310703 tgtgaagccccgatacttcacaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacctgcctgatacttcccgatacgtatcgatagagtat 22310802  T
Q  282 ccaaatattaaattttatttt 302  Q
    | |||||||||||||||||||    
T  22310803 caaaatattaaattttatttt 22310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 42465027 - 42464909
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||    
T  42465027 tgtgaagccccgatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtat 42464928  T
Q  282 ccaaatattaaattttatt 300  Q
    ||||||||||| |||||||    
T  42464927 ccaaatattaatttttatt 42464909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 52121177 - 52121298
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||          |||| ||||||||||| ||||||||    
T  52121177 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagta 52121276  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  52121277 tccaaatattaaattttatttt 52121298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 28882797 - 28882678
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtatc 282  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||           ||| |||||||||||| ||||||||||    
T  28882797 gtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatc 28882698  T
Q  283 caaatattaaattttatttt 302  Q
    ||||||||||||||||||||    
T  28882697 caaatattaaattttatttt 28882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 28704723 - 28704845
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac----------gtatccggagagt 279  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||  |||||||          |||||||||||||    
T  28704723 actgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagt 28704822  T
Q  280 atccaaatattaaattttatttt 302  Q
    ||| |||||||||||||||||||    
T  28704823 atcaaaatattaaattttatttt 28704845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 5271489 - 5271587
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||| |||||| ||| ||||||| || |||||||| |||||||||||||||||||||||| |||||||||||  | |||||||||||||||    
T  5271489 atacttcaaaatagatgacatactgtatcccttgcgtatcctgaaccgataccttcccgatacgtatcaggagagtatccggagattaaattttatttt 5271587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 52505953 - 52505833
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||| ||||||||||||||||||          ||||||||||||||||| ||||||    
T  52505953 ctgtgaagccccgatacttaaaaatggatgatgtactgtat-ccctgcgtatcctgcaccgataccggcccgatatttcccgatacgtatccgaagagta 52505855  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  52505854 tccaaatattaaattttatttt 52505833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 21006605 - 21006496
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    ||||||||||||||||||||||||| |||||||| | |||| | || ||||| |||| |||||||| ||||| |||||| |||||||||||| |||||||    
T  21006605 tgtgaagccccgatacttcaaaatgaatgacgtatcatatctcatgcgtatcttgcatcgatacctgcccgacacgtattcggagagtatccgaatatta 21006506  T
Q  292 aattttattt 301  Q
    || |||||||    
T  21006505 aaatttattt 21006496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 19349708 - 19349600
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||| ||||||||||||||||| ||||||| |||||| |||||||| ||||||| ||||||| ||||||||||||| | ||||||| | || ||||||    
T  19349708 tgaagctccgatacttcaaaatggttgacgtatcgtatctcctgtgtaacctgcactgatacctgcccgatacgtatcagaagagtatacgaagattaaa 19349609  T
Q  294 ttttatttt 302  Q
    |||| ||||    
T  19349608 ttttttttt 19349600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 41742193 - 41742118
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  41742193 ctgtgaagcgccgatacttcaaaatggatgacgtattgtatcctctgtgtatcctgcaccgataccttcctgatac 41742118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 13748565 - 13748493
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| ||||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcaccgatacctgcccgatac 13748493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 6134500 - 6134382
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||| ||||| |||||||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacatacctgatacttcccgatatgtatcaggagagtatcc 6134401  T
Q  284 aaatattaaattttatttt 302  Q
     || ||||||| |||||||    
T  6134400 gaagattaaatattatttt 6134382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 22289839 - 22289722
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||          ||||| |||||||||| |||||||||||    
T  22289839 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccaatacctgcatgatacttcctgatacgtatcaggagagtatcc 22289740  T
Q  284 aaatattaaattttattt 301  Q
     || ||||||||||||||    
T  22289739 gaagattaaattttattt 22289722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 30787683 - 30787562
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || |||||          |||| ||||||||||| ||||||||    
T  30787683 ctgtgaagccccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctgtactgatacttgtttgacacttctcgatacgtatcaggagagta 30787584  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||| || |||||||||||||||    
T  30787583 tccgaagattaaattttatttt 30787562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 19420904 - 19420961
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 250  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19420904 gtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 13353296 - 13353197
Alignment:
Q  202 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttattt 301  Q
    |||||||| ||||||||||||||| |||||| |||| ||||||||| |||||| || |||||||||||||  ||| |||||| || | ||||||||||||    
T  13353296 cgatactttaaaatggatgacgtatcgtatctcctgcgtatcctgcgccgatatctgcccgatacgtatcaagagcgtatccgaagaataaattttattt 13353197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 28968511 - 28968582
Alignment:
Q  195 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||||||||||||||||||||||||| |||||  |  ||||||||||||||||||| ||||||||    
T  28968511 gaagccccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcaccgatacctgcccgatac 28968582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 29915859 - 29915924
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  29915859 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacct 29915924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 29965012 - 29965077
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  29965012 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacct 29965077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 30226420 - 30226492
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||  ||||||||||||||||||| || ||||||| ||| ||||||||||||||||||| ||||||||    
T  30226420 tgaagcccatatacttcaaaatggatgacttatcgtatcctctgcgtatcctgcaccgatacctgcccgatac 30226492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 52684200 - 52684319
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatc 282  Q
    ||||||| ||||||||||||||| ||||||||| |||||| | || |||||||||||||||||          ||| |||||||||||  ||||||||||    
T  52684200 gtgaagctccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatc 52684299  T
Q  283 caaatattaaattttatttt 302  Q
    | ||||||||||||||||||    
T  52684300 cgaatattaaattttatttt 52684319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 25937185 - 25937064
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||| ||||||| ||||||||||||||| |||||| |||| ||||||| |||| ||||          ||| |||||||||||| |||||||    
T  25937185 actgtgaagccc-gatactttaaaatggatgacgtatcgtatctcctgcgtatcctacaccaatacatgcccgatactttccgatacgtatctggagagt 25937087  T
Q  280 atccaaatattaaattttatttt 302  Q
    ||| |||||||||||||||||||    
T  25937086 atctaaatattaaattttatttt 25937064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 983202 - 983311
Alignment:
Q  202 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatccaaatatta 291  Q
    ||||| |||||||||||||||||| ||||||||||||||||  ||||| |||| ||          |||||||||||||| |||||||||||||| ||||    
T  983202 cgataattcaaaatggatgacgtatcgtatcccctgtgtattttgcactgatatctgtctgatacttcccgatacgtatcaggagagtatccaaagatta 983301  T
Q  292 aattttattt 301  Q
    ||||||||||    
T  983302 aattttattt 983311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 2122702 - 2122825
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcc---cctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagag 278  Q
    ||||||||||||||||||||||||||||||||||  ||||||   |||| ||||| |||||||||||          |||||||||||||||| ||||||    
T  2122702 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcaccgatacttgcctgatacttcccgatacgtatcaggagag 2122801  T
Q  279 tatccaaatattaaattttatttt 302  Q
     |||| || |||||||||||||||    
T  2122802 aatccgaagattaaattttatttt 2122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 42229672 - 42229746
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||| || |||||||||||| |||||||||   ||||||||| ||||||||||||||||||| ||||||||    
T  42229672 tgtgaagctccaatacttcaaaatagatgacgtattatatcccctgcgtatcctgcaccgatacctgcccgatac 42229746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 45533026 - 45532980
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  45533026 cttcccgatacgtatccgaagagtatccaaatattaaattttatttt 45532980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 3983715 - 3983815
Alignment:
Q  212 aaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaattttattt 301  Q
    ||||||||||||||| |||||| | |||||||||||||||||||          |||||||||||||||| ||||||||||| || ||||||||||||||    
T  3983715 aaatggatgacgtactgtatcctccgtgtatcctgcaccgatacttgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttattt 3983814  T
Q  302 t 302  Q
    |    
T  3983815 t 3983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 33238720 - 33238759
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgta 230  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33238720 ctgtgaagccccgatacttcaaaatggatgacgtaccgta 33238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 21157849 - 21157775
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| ||||||||||||||||||||||| ||||| | ||||| ||||||||  |||| || ||||||||    
T  21157849 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatac 21157775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 33240022 - 33240068
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33240022 cttcccgatacgtatcgggagagtatccaaatattatattttatttt 33240068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 49419245 - 49419298
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||||||||||||||||| |||||||| || |||||||||| ||||||||    
T  49419245 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcatcgatacct 49419298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 38889201 - 38889138
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| ||  | ||||||||||||||    
T  38889201 actgtgaagccctgatacttcaaaatggatgacgtatcgtatcctctacg-atcctgcaccgata 38889138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 45347295 - 45347369
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| ||||||||||||||||| |||| || |||||||||||  |||||||||| ||||||| ||||||||    
T  45347295 actgtgaagctccgatacttcaaaatggttgac-tatcgtatcccctg-ctatcctgcactgatacctgcccgatac 45347369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 19421488 - 19421534
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||    
T  19421488 cttcccgatacgtatcaggagagtatccgaagattaaattttatttt 19421534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 47750997 - 47750948
Alignment:
Q  205 tacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  47750997 tacttcaaaatggatgacgtactatatcctctgcgtatcctgcaccgata 47750948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 53165577 - 53165509
Alignment:
Q  234 cctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||| ||||| ||||| ||||||||||||||||||||| | |||| |||| || |||| ||||||||||    
T  53165577 cctgcgtatcatgcactgataccttcccgatacgtatcagaagagcatccgaagattatattttatttt 53165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 20510265 - 20510211
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||||||||||||||||| | |||||||| || ||||| || ||||||||||    
T  20510265 gatacttcaaaatggatgacgcatcgtatcccgtgcgtatcttgtaccgatacct 20510211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 28968582 - 28968628
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||| | ||||||||| || |||||||||||||||    
T  28968582 cttcccgatacgtatcagaagagtatccgaagattaaattttatttt 28968628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 41742118 - 41742072
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||    
T  41742118 cttcccgatacatatctggagagtatccgaagattaaattttatttt 41742072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 7899764 - 7899719
Alignment:
Q  257 ttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||||||| | ||||||||| || |||||||||||||||    
T  7899764 ttcccgatacgtatcagaagagtatccgaagattaaattttatttt 7899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 45347374 - 45347415
Alignment:
Q  261 cgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  45347374 cgatacgtatccgaagagtatccgaagattaaattttatttt 45347415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 25700759 - 25700832
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| |||||||||||  |||||||  ||  |||||| ||| ||||||||||||||||||| || |||||    
T  25700759 ctgtgaagcctcgatacttcaa--tggatgatatattgtatcctctgcgtatcctgcaccgatacctgcctgatac 25700832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 3403694 - 3403585
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaa 292  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3403694 gtgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgatatcttcccgatacgtatccggagagtatccaaatattaa 3403595  T
Q  293 attttatttt 302  Q
    ||||||||||    
T  3403594 attttatttt 3403585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 38492377 - 38492269
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38492377 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 38492278  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  38492277 ttttatttt 38492269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 19738693 - 19738815
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||    
T  19738693 actgggaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagt 19738792  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  19738793 atccaaatattaaattttatttt 19738815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 52122990 - 52122869
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  52122990 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 52122891  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  52122890 tccaaatattaaattttatttt 52122869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 5834827 - 5834948
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  5834827 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagta 5834926  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  5834927 tccaaatattaaattttatttt 5834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 8064227 - 8064109
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||||     
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 8064128  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  8064127 aaatattaaattttatttt 8064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 42472691 - 42472569
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||          |||||| |||||||||||||||||    
T  42472691 actgtgaagtcccgatacttcaaaatggatgacgtactgtattccctgcgtatcctgcaccgatacttgcccgatacttcccaatacgtatccggagagt 42472592  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  42472591 atccaaatattaaattttatttt 42472569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 28376993 - 28377114
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcc----------cgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||          ||||||||| | ||||||||    
T  28376993 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctacccgatacttttcgatacgtaccgggagagta 28377092  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  28377093 tccaaatattaaattttatttt 28377114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 41145609 - 41145730
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||          ||| ||||||||||| |||||||||    
T  41145609 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagta 41145708  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  41145709 tccaaatattaaattttatttt 41145730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 53322335 - 53322455
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagtat 281  Q
    |||||||||||||||||||||||||||||||||| |||||||  || ||||||||||| ||||||          |||||||||||||||||||||||||    
T  53322335 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagtat 53322434  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  53322435 ccaaatattaaattttatttt 53322455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 14795020 - 14795115
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||           |||||||||||||||||||||||||||||||    
T  14795020 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------ccgatacgtatccggagagtatccaaatatt 14795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 5325839 - 5325721
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||          |||||||||||||||| |||||||||||    
T  5325839 tgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 5325740  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  5325739 aaatattaaattttatttt 5325721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 36943708 - 36943787
Alignment:
Q  223 gtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| || |||||| ||||||||    
T  36943708 gtaccgtatcccctgtgtatcctgcaccgatacctacccgatacgtatcagaagagtatccgaagattaaaatttatttt 36943787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 52721274 - 52721382
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||          ||||||||||||| ||||||||||||||||||||||    
T  52721274 atacttcaaaatagatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccgatacgtattcggagagtatccaaatattaaa 52721373  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  52721374 ttttatttt 52721382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 2586336 - 2586408
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||    
T  2586336 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgagtatccttcaccgacacctgcccgatac 2586408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 55901257 - 55901185
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  55901257 tgaaaccccgatactttaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacatacccgatac 55901185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 40694070 - 40694188
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||| ||| |||||||| || |||| ||||||||||||          |||||||||||||||| ||||||||||     
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcaccgatacctgattgatacttcccgatacgtatcaggagagtatct 40694169  T
Q  284 aaatattaaattttatttt 302  Q
     || |||||||||||||||    
T  40694170 gaagattaaattttatttt 40694188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 52572210 - 52572273
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||    
T  52572210 tgaagccccgatactttaaaatggatgacgttccgtatcccctgtgcatcatgcaccgatacct 52572273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 1176981 - 1177053
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||||||| | ||||||| ||||||||||  |||||||||||| |||||| ||||||||    
T  1176981 tgaagccccgatacttcaaaatagttgacgtatcgtatcccctacgtatcctgcacccatacctgcccgatac 1177053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 10257697 - 10257772
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||| |||| ||| | |||||||| ||||||||    
T  10257697 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatccgctgcgtattctgtatcgatacctgcccgatac 10257772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 46432054 - 46431933
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||| |||||||||||| |||||||||| ||||||| |||  ||||||||| ||||||          ||||||||||||||||  ||||||    
T  46432054 actgtgaagccc-gatacttcaaaacggatgacgtatcgtatcctctgcatatcctgcaacgatacctgactgatacttcccgatacgtatcaagagagt 46431956  T
Q  280 atccaaatattaaattttatttt 302  Q
    ||||||| |||||||||||||||    
T  46431955 atccaaagattaaattttatttt 46431933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 47607107 - 47607165
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 249  Q
    |||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||    
T  47607107 ctgtgaagccccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgcac 47607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 17892248 - 17892320
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||| |||||||||||||||||| ||||||||||||| | || ||||| | ||||||||||| ||||||||    
T  17892248 tgaagctccgatacttcaaaatggacgacgtaccgtatctcatgcgtatcatacaccgatacctgcccgatac 17892320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 36512052 - 36511980
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||||||||| |||||||  ||||||| || ||||||||| ||||||| | ||||||||    
T  36512052 tgaagccccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgcgccgatacttgcccgatac 36511980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 44121960 - 44121888
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||  ||||||||||||||| |||||| ||||||  ||| ||||||||||||||||||| ||||||||    
T  44121960 tgaagcccacatacttcaaaatggacgacgtatcgtatcttctgcgtatcctgcaccgatacctgcccgatac 44121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 295
Target Start/End: Original strand, 21058843 - 21058944
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||| |||||| |||||||| ||||||| |||||||||||||||||||||           ||||||||||||||| |||||||||||||| ||||||    
T  21058843 atactttaaaatgaatgacgtagcgtatccactgtgtatcctgcaccgatacatgtctgatatttcccgatacgtatctggagagtatccaaagattaaa 21058942  T
Q  294 tt 295  Q
    ||    
T  21058943 tt 21058944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 31946324 - 31946262
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 255  Q
    |||||||  |||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||    
T  31946324 gtgaagcttcgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcaccgatac 31946262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 39957636 - 39957682
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39957636 cttctcgatacgtatccggagagtatccgaatattaaattttatttt 39957682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 21637665 - 21637783
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatcc 283  Q
    ||||| || |||||||||||||||||||||| || || ||||| ||||| |||||  |||||||          |||||||||||||| |||||||||||    
T  21637665 tgaagtccagatacttcaaaatggatgacgtcccataccccctatgtattctgcattgatacctctcttatacttcccgatacgtatcaggagagtatcc 21637764  T
Q  284 aaatattaaattttatttt 302  Q
     || |||||||||||||||    
T  21637765 gaagattaaattttatttt 21637783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 4400540 - 4400586
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4400540 cttcccgatacgtatcaggagagtatcagaatattaaattttatttt 4400586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 36561831 - 36561771
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 255  Q
    |||||| | |||||||||||||||||||| ||  |||||||| |||||||||||||||||||    
T  36561831 tgaagctctgatacttcaaaatggatgacttattgtatcccc-gtgtatcctgcaccgatac 36561771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 37992653 - 37992533
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||||| ||| |||||||||||||| ||||||  ||||||| || | ||| |||||||||||          ||| |||||||||||| | |||||||    
T  37992653 tgtgaagctccggtacttcaaaatggaagacgtattgtatcccttgcggatcttgcaccgatacatgtctgatactttccgatacgtatcagaagagtat 37992554  T
Q  282 ccaaatattaaattttatttt 302  Q
    ||||| |||||||||||||||    
T  37992553 ccaaagattaaattttatttt 37992533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 51858834 - 51858883
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcct 245  Q
    |||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  51858834 aagccccgatactttaaaatggatgacgtatcgtatctcctgcgtatcct 51858883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 27981905 - 27981956
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||||||||||||||| |||||| |||| | ||||| ||||||||    
T  27981905 gatacttcaaaatggatgacgtatcgtatctcctgcgcatcctccaccgata 27981956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 51674856 - 51674919
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 255  Q
    |||||||| ||||||||||||||| ||||||||| |||||| ||||  ||| |||||| |||||    
T  51674856 tgtgaagcgccgatacttcaaaatagatgacgtatcgtatctcctgcatattctgcactgatac 51674919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 726654 - 726624
Alignment:
Q  202 cgatacttcaaaatggatgacgtaccgtatc 232  Q
    |||||||||||||||||||||||||||||||    
T  726654 cgatacttcaaaatggatgacgtaccgtatc 726624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 754190 - 754220
Alignment:
Q  202 cgatacttcaaaatggatgacgtaccgtatc 232  Q
    |||||||||||||||||||||||||||||||    
T  754190 cgatacttcaaaatggatgacgtaccgtatc 754220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 4119567 - 4119505
Alignment:
Q  240 tatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||  ||||||| || |||||||||| ||||||||||| |  |||||||||||||||    
T  4119567 tatcctgcattgatacctgcctgatacgtatcgggagagtatccgacaattaaattttatttt 4119505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 52572278 - 52572307
Alignment:
Q  273 ggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||||||||||    
T  52572278 ggagagtatccaaatattaaattttatttt 52572307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 12852116 - 12852226
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  12852116 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-cttcctgatacgtatccggagagtatccaaatatt 12852214  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  12852215 aaattttatttt 12852226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 26795114 - 26795004
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  26795114 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata-ctttccgatacgtatccggagagtatccaaatatt 26795016  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  26795015 aaattttatttt 26795004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 32707952 - 32707831
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  32707952 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 32707853  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  32707852 tccaaatattaaattttatttt 32707831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 39690884 - 39690763
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  39690884 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagta 39690785  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  39690784 tccaaatattaaattttatttt 39690763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 6243280 - 6243169
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 289  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6243280 actgtgaagctccgatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcaccgata-ctttccgatacgtatccggagagtatccgaatat 6243182  T
Q  290 taaattttatttt 302  Q
    |||||||||||||    
T  6243181 taaattttatttt 6243169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 33829753 - 33829871
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||    
T  33829753 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagagtatcc 33829852  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||| ||||    
T  33829853 aaatattaaattttttttt 33829871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 1639903 - 1639782
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||          |||||||||||||||||| ||||||    
T  1639903 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagta 1639804  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  1639803 tccaaatattaaattttatttt 1639782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 9792316 - 9792437
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||          ||||||||||||||||| |||||||    
T  9792316 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctgcccgatacttcccgatacgtatccagagagta 9792415  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  9792416 tccaaatattaaattttatttt 9792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 30777643 - 30777522
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||          |||||||||||||||||||||||||    
T  30777643 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 30777544  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  30777543 tccaaatattaaattttatttt 30777522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 32624875 - 32624995
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||          ||||||||||||||| || |||||||    
T  32624875 tgtgaagccccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctgcccgatacttcccgatacgtattcgaagagtat 32624974  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  32624975 ccaaatattaaattttatttt 32624995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 30284725 - 30284607
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| |||||||||||    
T  30284725 tgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatcc 30284626  T
Q  284 aaatattaaattttatttt 302  Q
     || |||||||||||||||    
T  30284625 gaagattaaattttatttt 30284607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 41392830 - 41392712
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||| |||||||| ||||||||    
T  41392830 tgaagtccagatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatcc 41392731  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  41392730 aaatattaaattttatttt 41392712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 10656817 - 10656892
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  10656817 ctgtgaagccccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatac 10656892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 30918376 - 30918494
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||          ||||||||||||||| ||||||||||    
T  30918376 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtattcggagagtat 30918475  T
Q  282 ccaaatattaaattttatt 300  Q
    | ||||||||| |||||||    
T  30918476 caaaatattaatttttatt 30918494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 7629070 - 7629177
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || || |||| |||||||||||||||| ||||||||||  || ||||||    
T  7629070 tgaagccctgatacctcaaaatggatgacgtatcgtatcccctgcgtatcttgtactgata-cttcccgatacgtatcaggagagtatctgaagattaaa 7629168  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  7629169 ttttatttt 7629177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 1795390 - 1795464
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  1795390 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcaccgatacctgcccgatac 1795464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 26716270 - 26716391
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||          |||||||||||||||| | ||||||    
T  26716270 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagta 26716369  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||| || |||||||||||||||    
T  26716370 tccgaagattaaattttatttt 26716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 26986010 - 26986131
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||          |||||||||||||||| | ||||||    
T  26986010 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagta 26986109  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||| || |||||||||||||||    
T  26986110 tccgaagattaaattttatttt 26986131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 11906220 - 11906336
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatccaa 285  Q
    ||||| ||||||||||||||||||||||||  |||| ||||| |||||||||||||||| ||          |||||||||||||||||||||||||| |    
T  11906220 aagcctcgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccga 11906319  T
Q  286 atattaaattttatttt 302  Q
    |||||||||||||||||    
T  11906320 atattaaattttatttt 11906336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 32728831 - 32728709
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagt 279  Q
    |||||||||| ||||||||||||||| ||||| |||  |||||||||| ||||| |||| ||||||||          ||||||||||||||||||||||    
T  32728831 actgtgaagctccgatacttcaaaattgatgatgtattgtatcccctgcgtatcttgcatcgatacctgcccgatacttcccgatacgtatccggagagt 32728732  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||| ||||||||||    
T  32728731 atccaaatattagattttatttt 32728709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 26691618 - 26691734
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 285  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||          ||||||||||||||||  |||||||||| |    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26691717  T
Q  286 atattaaattttatttt 302  Q
    | |||||||||||||||    
T  26691718 agattaaattttatttt 26691734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 26961350 - 26961466
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 285  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||          ||||||||||||||||  |||||||||| |    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26961449  T
Q  286 atattaaattttatttt 302  Q
    | |||||||||||||||    
T  26961450 agattaaattttatttt 26961466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 302
Target Start/End: Original strand, 7977296 - 7977359
Alignment:
Q  239 gtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||    
T  7977296 gtatcctgcaccgatacttgcccgatacgtattcggagagtatctaaatattaaattttatttt 7977359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 17138370 - 17138254
Alignment:
Q  195 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagtatcca 284  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||           |||||||||||||||| ||||| |||||     
T  17138370 gaagccccgatacttcaaaatagatgacgta-tgtatcccctgcgtatcctgcaccgataattgcctgatacttcccgatacgtatcaggagaatatccg 17138272  T
Q  285 aatattaaattttatttt 302  Q
    || |||||||||||||||    
T  17138271 aagattaaattttatttt 17138254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 5612562 - 5612488
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| ||||||||||||||||||||||| ||||| | ||||| ||||||||  |||| || ||||||||    
T  5612562 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatac 5612488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 42366220 - 42366150
Alignment:
Q  195 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgata 265  Q
    ||||| || |||||||||||| ||||| |||| |||||||||| ||||||||||| ||||||| |||||||    
T  42366220 gaagctccaatacttcaaaatagatgatgtactgtatcccctgcgtatcctgcactgatacctgcccgata 42366150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 3934906 - 3934788
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    ||||||| | |||||| |||||||||||||||   ||||||||| |||||| ||||||||||          ||| |||||||||||| |||||||||||    
T  3934906 tgaagcctccatactttaaaatggatgacgtattatatcccctgcgtatcccgcaccgatacctacctgatacttaccgatacgtatcaggagagtatcc 3934807  T
Q  284 aaatattaaattttatttt 302  Q
     || |||||||||||||||    
T  3934806 gaagattaaattttatttt 3934788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 5721985 - 5722059
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||| |||| || ||||| ||||||||| ||||||||||| ||||||||||| ||||| | ||||||||    
T  5721985 ctgtgaagccc-gatattttaaaattgatgacgtatcgtatcccctgcgtatcctgcactgatacatgcccgatac 5722059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 22774552 - 22774626
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||| | |||||||| ||||||| || |||| |||||||||||  ||||||||||||||| || ||||||||    
T  22774552 tgtgaagtctcgatactttaaaatggttggcgtatcgtatcccctgcatatcctgcaccgatatctgcccgatac 22774626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 15066148 - 15066209
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgata 265  Q
    |||||||||||| ||||| ||| |||||||| ||||||| ||||||||||| || |||||||    
T  15066148 atacttcaaaatagatgatgtatcgtatcccatgtgtattctgcaccgatatctgcccgata 15066209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 5986108 - 5986068
Alignment:
Q  262 gatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  5986108 gatacgtattgggagagtatccaaatattaaattttatttt 5986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 14836390 - 14836441
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||||||| |||||||  |||||||||| |||||||||| |||||    
T  14836390 gatacttcaaaatggttgacgtattgtatcccctgcgtatcctgcatcgata 14836441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 22737862 - 22737948
Alignment:
Q  200 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    |||||||||||||||| |||||||||  |||||  |||     | |||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  22737862 cccgatacttcaaaattgatgacgtattgtatcatctg-----catgcatcgatacctgcccgatacgtatcaggagagtatccaaagatta 22737948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 21251541 - 21251583
Alignment:
Q  260 ccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  21251541 ccgatacgtatcaggagagtatccgaatattaaatttaatttt 21251583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 27938170 - 27938224
Alignment:
Q  201 ccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 255  Q
    |||||||||||||||||||||||||  ||||| | || ||||| |||||||||||    
T  27938170 ccgatacttcaaaatggatgacgtattgtatctcatgcgtatcatgcaccgatac 27938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 34032441 - 34032487
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||| ||||||||||| || ||||| |||||||||    
T  34032441 cttcccgatacgtatcaggagagtatccgaagattaatttttatttt 34032487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 35746371 - 35746306
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||| ||||||||||||||| |||||||||  ||||| |||  ||||| |||| ||||||||    
T  35746371 tgtgaagctccgatacttcaaaatagatgacgtattgtatctcctacgtatcatgcatcgatacct 35746306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 41233388 - 41233440
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 255  Q
    ||||||||||||||||||||||| |||||  |||  |||||||||| ||||||    
T  41233388 gatacttcaaaatggatgacgtatcgtatttcctacgtatcctgcaacgatac 41233440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 32638974 - 32638866
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32638974 tgaagctctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 32638875  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  32638874 ttttatttt 32638866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 16384613 - 16384735
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||| |||||    
T  16384613 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagt 16384712  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  16384713 atccaaatattaaattttatttt 16384735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 2873030 - 2872910
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||    
T  2873030 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 2872931  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||| ||||||||||||    
T  2872930 ccaaatatgaaattttatttt 2872910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 12357889 - 12357996
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaa 12357987  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  12357988 ttttatttt 12357996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 12359017 - 12359124
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaa 12359115  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  12359116 ttttatttt 12359124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 5539433 - 5539541
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5539433 ctgtgaagccc-gatacttcaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgatacctgcccgatatgtatccggagagtatccaaatatt 5539530  T
Q  291 aaattttattt 301  Q
    |||||||||||    
T  5539531 aaattttattt 5539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 13422205 - 13422326
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||          ||||||||||||||| |||||||||    
T  13422205 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagta 13422304  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  13422305 tccaaatattaaattttatttt 13422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 32759370 - 32759491
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  32759370 ctgtgaagcctcgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagta 32759469  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  32759470 tccaaatattaaattttatttt 32759491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 32877434 - 32877555
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  32877434 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagta 32877533  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  32877534 tccaaatattaaattttatttt 32877555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 34901503 - 34901382
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  34901503 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 34901404  T
Q  281 tccaaatattaaattttatttt 302  Q
    || |||||||||||||||||||    
T  34901403 tctaaatattaaattttatttt 34901382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 36483432 - 36483553
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||| ||||||    
T  36483432 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaagagta 36483531  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  36483532 tccaaatattaaattttatttt 36483553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 43771825 - 43771704
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  43771825 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 43771726  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  43771725 tccaaatattaaattttatttt 43771704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 22201458 - 22201337
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  22201458 ctgtgaagtcccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 22201359  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  22201358 tccaaatattaaattttatttt 22201337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 28876687 - 28876566
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||          |||| |||||||||||| |||||||    
T  28876687 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatccagagagta 28876588  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  28876587 tccaaatattaaattttatttt 28876566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 4245936 - 4246058
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||          |||||||||||||||||| |||||    
T  4245936 actgtgaagccccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagt 4246035  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  4246036 atccaaatattaaattttatttt 4246058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 6028484 - 6028605
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           ||| ||||||| |||| ||||||||    
T  6028484 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagta 6028583  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  6028584 tccaaatattaaattttatttt 6028605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 12580674 - 12580553
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||           |||||||||||||||||||||||||    
T  12580674 ctgtgaagccccgatacttcaaaatagatgatgtaccgtatctcctgcgtatcctgcaccgataactgtctgatacttcccgatacgtatccggagagta 12580575  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  12580574 tccaaatattaaattttatttt 12580553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 25022123 - 25022243
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||          ||||| |||||||||| |||||||||    
T  25022123 tgtgaagccccaatacttcaaaatggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagtat 25022222  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  25022223 ccaaatattaaattttatttt 25022243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 45217341 - 45217220
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| |||||||||||  ||  |||||||||| |||||||||||||||||||          | |||||||||||||||||||||    
T  45217341 ctgtgaagccccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagta 45217242  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  45217241 tccaaatattaaattttatttt 45217220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 40412433 - 40412514
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccg 273  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  40412433 tgtgaagccccaatacttcaaaatggatgatgtatcgtatcccctgcgtatcctgcaccgttacctgcccgatacgtatccg 40412514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 19436272 - 19436346
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||  |||||||    
T  19436272 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatac 19436346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 19572421 - 19572495
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||  |||||||    
T  19572421 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatac 19572495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 37372256 - 37372376
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||| ||||||||||| |||||          |||||||||||||||| ||||||||    
T  37372256 ctgtgaagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagta 37372355  T
Q  281 tccaaatattaaattttattt 301  Q
    ||| || ||||||||||||||    
T  37372356 tccgaagattaaattttattt 37372376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 7411636 - 7411708
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||| |||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||| ||||||||    
T  7411636 tgaagctccgatacttcaaaatggatggcgtatcgtatccactgtgtatcctgcatcgatacctgcccgatac 7411708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 32424928 - 32424984
Alignment:
Q  201 ccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacct 32424984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 19948112 - 19948006
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 285  Q
    |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||          |||||||||||||| | |||||||||||||    
T  19948112 aagccctgatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgctcgatacttcccgatacgtaccgggagagtatccaa 19948013  T
Q  286 atattaa 292  Q
    |||||||    
T  19948012 atattaa 19948006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 37668579 - 37668700
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||           ||||||||||| ||| |||| | ||    
T  37668579 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcttgcaccaatatctgtctgatacttcccgatacatatacggataata 37668678  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  37668679 tccaaatattaaattttatttt 37668700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 27886188 - 27886308
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||| ||||||||||||||||||||||||||  |||| |||||  ||||||||||||||||          |||||||||||||||| |||||||||    
T  27886188 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtat 27886287  T
Q  282 ccaaatattaaattttatttt 302  Q
    || || |||||| ||||||||    
T  27886288 ccgaagattaaagtttatttt 27886308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 27944846 - 27944966
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||| ||||||||||||||||||||||||||  |||| |||||  ||||||||||||||||          |||||||||||||||| |||||||||    
T  27944846 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtat 27944945  T
Q  282 ccaaatattaaattttatttt 302  Q
    || || |||||| ||||||||    
T  27944946 ccgaagattaaagtttatttt 27944966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 5818424 - 5818366
Alignment:
Q  199 ccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||||||||||||||||||||||| |||||| | || |||||||||||||||||||    
T  5818424 ccccgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcaccgatacct 5818366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 38388661 - 38388739
Alignment:
Q  188 gcactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| ||||||||||||||||||||||  |||  |||||| ||| |||||||||||||||||||  |||||||    
T  38388661 gcactgtgaaaccccgatacttcaaaatggatgctgtattgtatcctctgcgtatcctgcaccgatacctgtccgatac 38388739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 32678 - 32753
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||| |||||||||||||| ||||||| ||||||| | ||||| |||||||||||||| ||||| || ||||||||    
T  32678 ctgtaaagccccgatactttaaaatggttgacgtatcatatcctctgtgtatcctgcatcgatatctgcccgatac 32753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 29355620 - 29355683
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||| |||||||||||||||||||| || | ||||||||| |||||||||| |||||    
T  29355620 ctgtgaagccctgatacttcaaaatggatgacatatcatatcccctgggtatcctgcatcgata 29355683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 42949207 - 42949248
Alignment:
Q  261 cgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  42949207 cgatacgtatcgggagagtatccaaatattaaattttatttt 42949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 27968103 - 27968166
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||| |||||||||| ||||| |||||||||  |||| |||||  ||||||||||||||||||    
T  27968103 tgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacct 27968166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 28025089 - 28025152
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||| |||||||||| ||||| |||||||||  |||| |||||  ||||||||||||||||||    
T  28025089 tgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacct 28025152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 28737255 - 28737298
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctg 237  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||    
T  28737255 tgaagccccgatatttcaaaatggatgacgtattgtatcccctg 28737298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 8171297 - 8171239
Alignment:
Q  239 gtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||||||    |||||||||| | ||||||||| ||||||||||||||||||    
T  8171297 gtatcctgcaccgatacct----gatacgtatc-gtagagtatccgaatattaaattttatttt 8171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 20182380 - 20182429
Alignment:
Q  200 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 249  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||||||    
T  20182380 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgcac 20182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 221
Target Start/End: Complemental strand, 41099406 - 41099377
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatga 221  Q
    ||||||||||||||||||||||||||||||    
T  41099406 tgtgaagccccgatacttcaaaatggatga 41099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 25651 - 25541
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  25651 ctgtgaagccccgatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcaccgata-cttcccgatacgtatccggagagtatccaaatatt 25553  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  25552 aaattttatttt 25541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 27902 - 27791
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  27902 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgtccgatacgtatccgcagagtatccaaatatt 27803  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  27802 aaattttatttt 27791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 36367813 - 36367702
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    |||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36367813 ctgtgaagtcctgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatatt 36367714  T
Q  291 aaattttatttt 302  Q
    ||||||||||||    
T  36367713 aaattttatttt 36367702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 20409672 - 20409554
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||    
T  20409672 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 20409573  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  20409572 aaatattaaattttatttt 20409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 1043224 - 1043345
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  1043224 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 1043323  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  1043324 tccaaatattaaattttatttt 1043345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 28949362 - 28949241
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  28949362 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagta 28949263  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  28949262 tccaaatattaaattttatttt 28949241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 6916995 - 6916874
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  6916995 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 6916896  T
Q  281 tccaaatattaaattttatttt 302  Q
    || |||||||||||||||||||    
T  6916895 tctaaatattaaattttatttt 6916874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 8132180 - 8132301
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  8132180 ctgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggagagta 8132279  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  8132280 tccaaatattaaattttatttt 8132301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 37346969 - 37346848
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| || |||||    
T  37346969 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggggagta 37346870  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  37346869 tccaaatattaaattttatttt 37346848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 38330424 - 38330545
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  38330424 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 38330523  T
Q  281 tccaaatattaaattttatttt 302  Q
    || |||||||||||||||||||    
T  38330524 tctaaatattaaattttatttt 38330545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 52895834 - 52895713
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  52895834 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 52895735  T
Q  281 tccaaatattaaattttatttt 302  Q
    || |||||||||||||||||||    
T  52895734 tctaaatattaaattttatttt 52895713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 37104120 - 37104238
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          ||||| ||||||||||||||||||||||    
T  37104120 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatcc 37104219  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  37104220 aaatattaaattttatttt 37104238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 1036456 - 1036577
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  1036456 ctgtgaagccctcatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 1036555  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  1036556 tccaaatattaaattttatttt 1036577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 3426845 - 3426966
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||          ||||| |||||||||||||||||||    
T  3426845 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 3426944  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  3426945 tccaaatattaaattttatttt 3426966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 5984228 - 5984345
Alignment:
Q  195 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcca 284  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||          |||||| ||||||||| ||||||||||||    
T  5984228 gaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtattctgcaccgatacatgcttgatacttcccaatacgtatctggagagtatcca 5984327  T
Q  285 aatattaaattttatttt 302  Q
    ||||||||||||||||||    
T  5984328 aatattaaattttatttt 5984345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 13013113 - 13012992
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||| |||||          |||||||||||||||| ||||||||    
T  13013113 ctgtgaagccccaatacttcaaaatggatgacatatcgtatcccctgtgtatcatgcactgatacctgcccgatacttcccgatacgtatcgggagagta 13013014  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  13013013 tccaaatattaaattttatttt 13012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 43189652 - 43189773
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||| ||||||||||| ||||||||    
T  43189652 ctgtgaagacccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcaggagagta 43189751  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||| ||||    
T  43189752 tccaaatattaaattttttttt 43189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 38948729 - 38948850
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||           |||| ||||||||||||| ||| ||    
T  38948729 ctgtgaagctccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccaatacttctcgatacgtatccgaagaata 38948828  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  38948829 tccaaatattaaattttatttt 38948850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 9781638 - 9781714
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  9781638 actgtgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatac 9781714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 30323712 - 30323833
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    |||| |||||||||||||||||||||||||||| | ||||| | ||||||||||||||| ||||           |||||||||||||||| ||||||||    
T  30323712 ctgtaaagccccgatacttcaaaatggatgacgcaacgtattctctgtgtatcctgcactgatatctgcccgatacttcccgatacgtatctggagagta 30323811  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  30323812 tccaaatattaaattttatttt 30323833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 31653523 - 31653402
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||||||| ||||||||||||||||| | ||| |||||||| |||||||| ||||||||||           |||||||||||||||| ||||||||    
T  31653523 ctgtgaagccctgatacttcaaaatggataatgtatcgtatcccttgtgtatcatgcaccgatatctgcccgatacttcccgatacgtatcgggagagta 31653424  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  31653423 tccaaatattaaattttatttt 31653402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 25256614 - 25256734
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtat 281  Q
    |||||||| | |||| ||||||||||||||||||| |||||| ||| |||| ||||||||||||||          ||||||||||||||||||||||||    
T  25256614 tgtgaagctctgatatttcaaaatggatgacgtactgtatcctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtat 25256713  T
Q  282 ccaaatattaaattttatttt 302  Q
     ||||||||||||||||||||    
T  25256714 tcaaatattaaattttatttt 25256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 28659409 - 28659300
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaa 292  Q
    ||||||| |||||||||||||||| |||| ||||| ||||| |||||||||||          ||| |||||||||||||||||||||||||||||||||    
T  28659409 gatactttaaaatggatgacgtacggtattccctgcgtatcatgcaccgatacatgcccgatactttccgatacgtatccggagagtatccaaatattaa 28659310  T
Q  293 attttatttt 302  Q
    ||||||||||    
T  28659309 attttatttt 28659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 9092587 - 9092494
Alignment:
Q  208 ttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttattt 301  Q
    ||||||||||||||||||| ||||||  |||||||||||||   |||||| || |||||||||| ||||||||||| || ||||||||||||||    
T  9092587 ttcaaaatggatgacgtactgtatcctatgtgtatcctgcagtcatacctgcctgatacgtatcaggagagtatccgaagattaaattttattt 9092494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 24590233 - 24590124
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct-tcccgatacgtatccggagagtatccaaatattaa 292  Q
    |||||| |||||||||||||| ||||| |||||||||| || || ||||||||||| |||||||  |||||||||||||  ||||||||   || |||||    
T  24590233 tgaagcgccgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgcactgatacctgccccgatacgtatcaagagagtatttgaagattaa 24590134  T
Q  293 attttatttt 302  Q
    ||||||||||    
T  24590133 attttatttt 24590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 2364673 - 2364749
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||| ||| ||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||| ||| ||||    
T  2364673 actgtgaaacccagatacttcaaaatggataacgtaccatatcccctgcgtatcctgcatcgatacctgcccaatac 2364749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 2472976 - 2472900
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||  |||||||||||| ||||| || |||||    
T  2472976 actgtgaagctccgatacttcaaaatagatgacgtatcgtatcccctgcatatcctgcaccggtacctgcctgatac 2472900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 34096673 - 34096610
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||||| ||||||||||||||||    
T  34096673 ctgtgaagccccgatatttcaaaatgattgacgtatcgtatcccctgcgtatcctgcaccgata 34096610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 29167944 - 29168010
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||| ||||| | |||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  29167944 ctgtaaagcctccatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacct 29168010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 41676105 - 41676035
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||| || |||||||||||||||||||||| |||| ||||| |||||||||||||  |||||||    
T  41676105 aagccccgatattttaaaatggatgacgtaccgtatctcctgcgtatcatgcaccgatacctgtccgatac 41676035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 38218404 - 38218501
Alignment:
Q  200 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttat 299  Q
    ||||||||||||||||||||||||||||||||||| || ||||    | |||||| ||||  |||||||||| | ||||||||| || ||||||||||||    
T  38218404 cccgatacttcaaaatggatgacgtaccgtatcccttgcgtat----ctccgata-cttcttgatacgtatcagaagagtatccgaagattaaattttat 38218498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34432505 - 34432446
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 249  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||| ||||| |||||    
T  34432505 actgtgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgcac 34432446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 3708399 - 3708325
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||  |||||| |||| |||| | ||||||||    
T  3708399 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatac 3708325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 14167082 - 14167144
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||| | ||||||||||||||||||||| || |||||| |||| ||||||||||||||||    
T  14167082 tgtgaagtctcgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcaccgata 14167144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 24849362 - 24849412
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtat 242  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  24849362 tgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtat 24849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 10822402 - 10822458
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 250  Q
    ||||||| |||||||||||||||||||||||| | ||| ||||| ||||||||||||    
T  10822402 tgaagcctcgatacttcaaaatggatgacgtatcatattccctgcgtatcctgcacc 10822458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 14334235 - 14334278
Alignment:
Q  259 cccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  14334235 cccgatacgtattgggagagtatccaaatattaaattttatttt 14334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 48715345 - 48715227
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||| |||||||||||||||||||||   ||| |||||| |||| ||||||| |||||||||          |||||||||||||||| ||||||| |    
T  48715345 tgtgaaaccccgatacttcaaaatggatattgtatcgtatctcctgcgtatcctacaccgataccggcccgatacttcccgatacgtatcaggagagtgt 48715246  T
Q  282 ccaaatattaaattttatt 300  Q
    || || |||||||||||||    
T  48715245 ccgaagattaaattttatt 48715227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 29861799 - 29861873
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||||||||||| |||||||  ||||| |||  ||||| |||||| | |||| ||||||||    
T  29861799 tgtgaagccccgatacttcaaaatggttgacgtattgtatctcctacgtatcatgcacccacacctgcccgatac 29861873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 40775997 - 40776051
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 250  Q
    |||||| |||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  40775997 aagcccagatacttcaaaatggaagacgtaatgtatcccctgcgtatcctgcacc 40776051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 9528943 - 9528894
Alignment:
Q  208 ttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||||||||||||||  ||||||| |||||||| |||||||||||||    
T  9528943 ttcaaaatggatgacgtattgtatcccttgtgtatcttgcaccgatacct 9528894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 14334169 - 14334209
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatc 232  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  14334169 ctgtgaagccc-gatacttcaaaatggatgacgtaccgtatc 14334209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 302
Target Start/End: Complemental strand, 32381175 - 32381059
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaa 285  Q
    |||||||||||||| |||||||||||  ||||||||||||||  |||| |||||| |||           |||||| ||||||||| ||||||||||| |    
T  32381175 aagccccgatactttaaaatggatgatataccgtatcccctgcatatcatgcaccaatatttgtctgatacttcccaatacgtatcaggagagtatccga 32381076  T
Q  286 atattaaattttatttt 302  Q
    | |||||||||||||||    
T  32381075 agattaaattttatttt 32381059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 36551492 - 36551540
Alignment:
Q  195 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatc 243  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |||||    
T  36551492 gaagccccgatacttcaaaattgatgacgtactgtctcccctgcgtatc 36551540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 33039618 - 33039676
Alignment:
Q  199 ccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||||||| ||||||||| || ||  ||||||| || |||||||||||||||||||    
T  33039618 ccccgatactttaaaatggataacatattgtatcccttgcgtatcctgcaccgatacct 33039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 8829826 - 8829751
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatc 271  Q
    ||||||||  |||||||||||| || || |||||||||  |||| |||||||||| ||||| ||||||||||||||||    
T  8829826 tgaagcccaaatacttcaaaatagacgaagtaccgtat-tcctgcgtatcctgcatcgata-cttcccgatacgtatc 8829751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 34432423 - 34432383
Alignment:
Q  262 gatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||| ||||||||||| || |||||||||||||||    
T  34432423 gatacgtatcaggagagtatccgaagattaaattttatttt 34432383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 189 - 302
Target Start/End: Original strand, 20536770 - 20536883
Alignment:
Q  189 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaata 288  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| | ||||||||||||| | ||||||||||||||    
T  20536770 cactgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgatacttgcccgatacgtatcggaagagtatccaaata 20536869  T
Q  289 ttaaattttatttt 302  Q
    ||||||||||||||    
T  20536870 ttaaattttatttt 20536883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 7876710 - 7876832
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||    
T  7876710 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagt 7876809  T
Q  280 atccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||||    
T  7876810 atccaaatattaaattttatttt 7876832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 38602443 - 38602322
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  38602443 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 38602344  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  38602343 tccaaatattaaattttatttt 38602322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 4170623 - 4170502
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  4170623 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagta 4170524  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  4170523 tccaaatattaaattttatttt 4170502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 33324815 - 33324936
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  33324815 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 33324914  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  33324915 tccaaatattaaattttatttt 33324936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 6497769 - 6497649
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||    
T  6497769 tgtgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtat 6497670  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  6497669 ccaaatattaaattttatttt 6497649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 16561797 - 16561918
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||          |||||||||||||||||||||||||    
T  16561797 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 16561896  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  16561897 tccaaatattaaattttatttt 16561918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 40309018 - 40308897
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||          |||||||||||||||||||||||||    
T  40309018 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 40308919  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  40308918 tccaaatattaaattttatttt 40308897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 6124170 - 6124291
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||          ||||| |||||||||||||||||||    
T  6124170 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgtgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 6124269  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  6124270 tccaaatattaaattttatttt 6124291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 7807495 - 7807374
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||          |||||||||||||||||||| ||||    
T  7807495 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagta 7807396  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  7807395 tccaaatattaaattttatttt 7807374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 18300969 - 18301090
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||          |||| ||||||||||| ||||||||    
T  18300969 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagta 18301068  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  18301069 tccaaatattaaattttatttt 18301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 45159418 - 45159308
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    |||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||| ||| || ||||||||||||| | ||||||| | |||||||    
T  45159418 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcaccaatatctgcccgatacgtatctgaagagtattcgaatatta 45159319  T
Q  292 aattttatttt 302  Q
    |||||||||||    
T  45159318 aattttatttt 45159308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 22484267 - 22484385
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||| ||          ||||||||||||||||||||||||||    
T  22484267 tgaagccccgatacttcaaaatggatgatgtaccgtattccctgcgtatcctgcatcgatatctgtccgatacttcccgatacgtatccggagagtatcc 22484366  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  22484367 aaatattaaattttatttt 22484385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 3563851 - 3563957
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||||||||||||||||||||||||||||||  |||||||||   ||| |||||| |||| |||||||||||||||| ||||||||||| || ||||||    
T  3563851 tgaagccccgatacttcaaaatggatgacgtattgtatcccctacatattctgcactgata-cttcccgatacgtatcaggagagtatccgaagattaaa 3563949  T
Q  294 ttttattt 301  Q
    ||||||||    
T  3563950 ttttattt 3563957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 12819298 - 12819388
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatc 282  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| ||||||||||||| ||||||||||    
T  12819298 ctgtgaagccctgatacttcaaaatggatgatgtaccgtatcccctgtgtatcctgc-catatacctgcccgatacgtatcgggagagtatc 12819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 28746773 - 28746698
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  28746773 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatac 28746698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 22570937 - 22571054
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||          ||||| ||||||||||||| ||||||||    
T  22570937 tgaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggggagtatcc 22571036  T
Q  284 aaatattaaattttattt 301  Q
    ||||||||||||||||||    
T  22571037 aaatattaaattttattt 22571054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 4561784 - 4561860
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| || |||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||    
T  4561784 actgtgaagctccaatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatacctgcccgatac 4561860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 35342317 - 35342389
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||    
T  35342317 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatac 35342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 4355325 - 4355443
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||          |||||||||||||||| ||||||||| |    
T  4355325 tgaagcctcgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagtatgc 4355424  T
Q  284 aaatattaaattttatttt 302  Q
    ||| |||||||||||||||    
T  4355425 aaagattaaattttatttt 4355443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 14824146 - 14824256
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    ||||||| |||||||||||||||| ||||||||| |||||| | || ||||| |||||||||| ||  | |||||||||| | ||||||||| || ||||    
T  14824146 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctgtctgatacgtatcagaagagtatccgaagatta 14824245  T
Q  292 aattttatttt 302  Q
    |||||||||||    
T  14824246 aattttatttt 14824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 1776557 - 1776484
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgat 264  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| || |||| |||||||||||||| ||||||    
T  1776557 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgat 1776484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 1005512 - 1005576
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  1005512 gtgaagctctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacct 1005576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 2319274 - 2319393
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatc 282  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||          ||||| |||||||||| | ||||||||    
T  2319274 gtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcaccgatacttgcttgatacttcctgatacgtatcagaagagtatc 2319373  T
Q  283 caaatattaaattttatttt 302  Q
    | || |||||||||||||||    
T  2319374 cgaagattaaattttatttt 2319393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 40536242 - 40536350
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||||||  |||||||||||||| | |||||| ||||| | || ||||||||||||||||||| ||||||||||||| | ||||||||  |  ||||||    
T  40536242 tgaagcccaaatacttcaaaatgggtaacgtactgtatcacatgcgtatcctgcaccgatacctacccgatacgtatcggaagagtatcagatcattaaa 40536341  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  40536342 ttttatttt 40536350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 5588103 - 5588170
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||    
T  5588103 actgtgaagctccgatacttcaaaatggatgacgtatcgtatcctctttgtatcttgcaccgatacct 5588170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 44156597 - 44156715
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||| ||||||          |||||||||||||||| |||||||||||    
T  44156597 tgaatccccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatcc 44156696  T
Q  284 aaatattaaattttatttt 302  Q
     || |||||||||||||||    
T  44156697 gaagattaaattttatttt 44156715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 24585530 - 24585592
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  24585530 tgaagccccgatacttcaaaatggatgatgtatcgtat-ccctgcgtatcctgcaccgatacct 24585592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 34146180 - 34146298
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct----------tcccgatacgtatccggagagtatcc 283  Q
    |||||| ||||||||| ||||||||||||||| ||||||  ||| |||| ||||||||||| ||          |||||||||||||| |||||||||||    
T  34146180 tgaagctccgatactttaaaatggatgacgtatcgtatcttctgcgtattctgcaccgatatctgcctgatacttcccgatacgtatcaggagagtatcc 34146279  T
Q  284 aaatattaaattttatttt 302  Q
    ||| |||||||||||||||    
T  34146280 aaagattaaattttatttt 34146298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 31236307 - 31236190
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||| |||||||||||| | |||          ||||||||||||||| ||||||||    
T  31236307 ctgtgaagccccgatactttaaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggagagta 31236208  T
Q  281 tccaaatattaaatttta 298  Q
    ||| || |||||||||||    
T  31236207 tccgaagattaaatttta 31236190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 14217272 - 14217212
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    |||||| |||||||||||||||||||||||||  |||||||||| |||| |||||||||||    
T  14217272 tgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcaccgata 14217212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 43214572 - 43214632
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  43214572 tgaagtccagatacttcaaaatggatgacgtatcgtatcccatgtgtatcctgcatcgata 43214632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 15880443 - 15880537
Alignment:
Q  189 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatcc 283  Q
    |||| ||||||||  |||||| ||||| |||||||| || |||  | || ||||| |||||||||||||||| |||||||||| |||||||||||    
T  15880443 cactttgaagcccaaatactttaaaatagatgacgttccatatttcttgcgtatcttgcaccgataccttcctgatacgtatcaggagagtatcc 15880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 37134414 - 37134356
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    |||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||    
T  37134414 aagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcactgata 37134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 40497431 - 40497385
Alignment:
Q  256 cttcccgatacgtatccggagagtatccaaatattaaattttatttt 302  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||    
T  40497431 cttcccgatacgtatcaggagagtatccaaagattaaattttatttt 40497385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 21104482 - 21104542
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  21104482 tgaagccccaatactttaaaatggatgacgtatcgtatcctctgcgtatcttgcaccgata 21104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 8483029 - 8482975
Alignment:
Q  200 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||||||||| |||||||| |||||||  || ||||||||||||||||    
T  8483029 cccgatacttcaaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgata 8482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 45158244 - 45158134
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||| |  |||||||||||| |||||| || ||||||   |  ||||| |||||  ||||||||||||||| |||| ||||||||||| |  |||    
T  45158244 ctgtgaagcacaaatacttcaaaattgatgacatatcgtatcagatacgtatcatgcactaataccttcccgatacatatcgggagagtatccgacaatt 45158145  T
Q  291 aaattttattt 301  Q
    |||||||||||    
T  45158144 aaattttattt 45158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 25933560 - 25933621
Alignment:
Q  189 cactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcacc 250  Q
    |||| ||||||||  |||||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  25933560 cactctgaagcccatatacttcaaaatggatgatgtatcgtatcccctgcgtatcatgcacc 25933621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 12206024 - 12206088
Alignment:
Q  193 gtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||| ||| ||||| ||||||||||||||| ||||||  ||||||||| |||| ||||||||    
T  12206024 gtgaagctccggtactttaaaatggatgacgtatcgtatcatctgtgtatcttgcatcgatacct 12206088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 35996651 - 35996706
Alignment:
Q  202 cgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    ||||||||||||||| |||| |||  |||||||||| ||||| |||||||||||||    
T  35996651 cgatacttcaaaatgaatgatgtattgtatcccctgcgtatcttgcaccgatacct 35996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 42183 - 42076
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  42183 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgata-cttcccgatacgtatctagagagtatccaaatattaaa 42085  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  42084 ttttatttt 42076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 8213 - 8092
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  8213 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 8114  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  8113 tccaaatattaaattttatttt 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 13862 - 13974
Alignment:
Q  190 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatat 289  Q
    ||||||||| ||||||||||||||||||||||||||| |||||  ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  13862 actgtgaagtcccgatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcactgttacctacccgatacgtatccggagagtatccaaatat 13961  T
Q  290 taaattttatttt 302  Q
    |||||||| ||||    
T  13962 taaattttttttt 13974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 1036947 - 1036826
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||    
T  1036947 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 1036848  T
Q  281 tccaaatattaaattttatttt 302  Q
    || |||||||||||||||||||    
T  1036847 tctaaatattaaattttatttt 1036826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 10894693 - 10894584
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| || |||||||||| |||||||||||||| |||    
T  10894693 ctgtgaagccctgatacttcaaaatggatgacgtaccgtatcccc-gcgtatcatgcaccgatacctgcctgatacgtatcaggagagtatccaaagatt 10894595  T
Q  291 aaattttattt 301  Q
    |||||||||||    
T  10894594 aaattttattt 10894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 3212474 - 3212595
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata----------ccttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||           |||||||||||||||||||||||||    
T  3212474 ctgtgaagccccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagagta 3212573  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  3212574 tccaaatattaaattttatttt 3212595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 8356958 - 8357076
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||| |||||||||    
T  8356958 tgaagtcctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatcc 8357057  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  8357058 aaatattaaattttatttt 8357076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 32130779 - 32130659
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacc----------ttcccgatacgtatccggagagtat 281  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||          ||||||||||||||| |||||||||    
T  32130779 tgtgaagccccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagtat 32130680  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  32130679 ccaaatattaaattttatttt 32130659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 26327152 - 26327227
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  26327152 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctgcccgatac 26327227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 7188894 - 7188779
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatcc 283  Q
    |||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||          ||||| ||||||||||||||||||||||    
T  7188894 tgaagccccgatacttcaaaatggatg---taccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcctgatacgtatccggagagtatcc 7188798  T
Q  284 aaatattaaattttatttt 302  Q
    |||||||||||||||||||    
T  7188797 aaatattaaattttatttt 7188779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 7254928 - 7255037
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatta 291  Q
    ||||||||  ||||||||||||||||| || ||| ||||||||||||||||| ||||||||||| | ||||||||||||| | ||||||||| || ||||    
T  7254928 tgtgaagcttcgatacttcaaaatggacgatgtatcgtatcccctgtgtatcatgcaccgatacatgcccgatacgtatcagaagagtatccgaagatta 7255027  T
Q  292 aattttattt 301  Q
    ||||||||||    
T  7255028 aattttattt 7255037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 27083982 - 27084102
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||| ||||||||  ||||||||    
T  27083982 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgctcaatacttcccaatacgtataaggagagta 27084081  T
Q  281 tccaaatattaaattttattt 301  Q
    |||||| ||||||||||||||    
T  27084082 tccaaagattaaattttattt 27084102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 31195977 - 31195869
Alignment:
Q  204 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||| |||||||||||||||||||||    
T  31195977 atacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaa 31195878  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  31195877 ttttatttt 31195869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 234306 - 234378
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||| ||||||||    
T  234306 tgaagccccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcaccgatacctgcccgatac 234378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 31079612 - 31079719
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaa 293  Q
    |||||| ||||||||| |||||||||||||||  |||||||||| |||||||||||||||| |||| ||||| ||||| ||| ||||||  || ||||||    
T  31079612 tgaagctccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgata-cttctcgataagtatcaggatagtatcttaagattaaa 31079710  T
Q  294 ttttatttt 302  Q
    |||||||||    
T  31079711 ttttatttt 31079719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 6708161 - 6708087
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||| |||||    
T  6708161 tgtgaagccccgatactttaaaatggatgacatattgtatcccctgtgtatcatgcaccgataccttcctgatac 6708087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 31741267 - 31741168
Alignment:
Q  201 ccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatattaaattttatt 300  Q
    ||||||||||||||||||||||||| ||||||||||  | ||| |||| |||||||| ||||||||||||| ||||||  || |||||| ||||||||||    
T  31741267 ccgatacttcaaaatggatgacgtatcgtatcccctacgcatcatgcatcgatacctgcccgatacgtatcgggagag--tctaaatatcaaattttatt 31741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 32017986 - 32018049
Alignment:
Q  203 gatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcccgatac 32018049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 25834616 - 25834496
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagtat 281  Q
    |||||| ||||||||||||||| ||||||||||| |||||||| || ||||||||||| |||||           ||| ||||||||||| ||| |||||    
T  25834616 tgtgaaaccccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtat 25834517  T
Q  282 ccaaatattaaattttatttt 302  Q
    |||||||||||||||||||||    
T  25834516 ccaaatattaaattttatttt 25834496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 3299139 - 3299204
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| |||  ||||||||||||||||||    
T  3299139 tgtgaagccctgatacttcaaaatagatgatgtaccgtatcctctgcatatcctgcaccgatacct 3299204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 19128153 - 19128225
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||| || |||||| ||||||| ||||||| |||||||||||||||||||||||| |||||  ||||||||    
T  19128153 tgaagctccaatactttaaaatggttgacgtatcgtatcccctgtgtatcctgcaccaatacccgcccgatac 19128225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 29892966 - 29893026
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    |||||||| ||||||| ||||||||||| |||| |||||||||| |||||||||| |||||    
T  29892966 tgaagcccagatactttaaaatggatgatgtactgtatcccctgcgtatcctgcatcgata 29893026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 13607903 - 13607840
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||| ||| ||||||||||||||||||||||| ||||||| |||  |||||||||| |||||||    
T  13607903 tgaatccctgatacttcaaaatggatgacgtatcgtatcctctgcatatcctgcactgatacct 13607840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 13061417 - 13061363
Alignment:
Q  200 cccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgata 254  Q
    ||||||||||||||||| |||||||||| ||| | ||| |||||||||| |||||    
T  13061417 cccgatacttcaaaatgaatgacgtaccatattctctgcgtatcctgcatcgata 13061363  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 11105286 - 11105347
Alignment:
Q  194 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac 255  Q
    |||||| | ||||||| ||||||||||||||||||||| |  || |||||||||| ||||||    
T  11105286 tgaagctctgatactttaaaatggatgacgtaccgtattctttgcgtatcctgcatcgatac 11105347  T

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Target: scaffold0250 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 5509 - 5630
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||||||    
T  5509 ctgtaaagccccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagta 5608  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  5609 tccaaatattaaattttatttt 5630  T

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Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 44711 - 44616
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatacgtatccggagagtatccaaatatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||           ||||||||||||||||||||||||||||    
T  44711 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccg-----------atacgtatccggagagtatccaaatatt 44623  T

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Target: scaffold0060 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 30565 - 30444
Alignment:
Q  191 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatac----------cttcccgatacgtatccggagagta 280  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||| ||||||| |||||||||          ||||| |||||||||||||||||||    
T  30565 ctgtgaagccccgatacttcaaaatggataacgtaccgtatttcctgcgtatcctacaccgatacctgcccgatacttcctgatacgtatccggagagta 30466  T
Q  281 tccaaatattaaattttatttt 302  Q
    ||||||||||||||||||||||    
T  30465 tccaaatattaaattttatttt 30444  T

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Target: scaffold0285 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 13252 - 13313
Alignment:
Q  196 aagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacct 257  Q
    |||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  13252 aagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatacct 13313  T

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Target: scaffold0240 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 10598 - 10672
Alignment:
Q  192 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcaccgataccttcccgatac 266  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||||| | ||||||||    
T  10598 tgtgaagcccagatactttaaaatggatgatgtaccatatcccctgcgtatcatgcaccgatacttgcccgatac 10672  T

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