View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_high_88 (Length: 263)
Name: NF18317_high_88
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_high_88 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 8007277 - 8007042
Alignment:
| Q |
18 |
atatctctgttccatcccattctctatatactatgagatactcaatcatttacattattcattgtatcactccctccatcaacatatagcatctattggt |
117 |
Q |
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| T |
8007277 |
atatctctgttccatcccattctctatatactatgagatactcaatcatttacattattcattgtatcactccctccatcaacatatagcatctattggt |
8007178 |
T |
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| Q |
118 |
tccatttggaccataaaataatatggaatccaactttgatgaacttcatcaaccaatattaactcatgatcatccaccaccacctgaactgaattctagt |
217 |
Q |
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| T |
8007177 |
tccatttggaccataaaataatatggaatccaactttgatgaacttcatcaaccaatattaactcatgatcatccaccaccacctgaactgaattctagt |
8007078 |
T |
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| Q |
218 |
cttgaagaagtgttatcaaacactcagttacctttg |
253 |
Q |
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||||||||| |||||||||||||||||||||||||| |
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| T |
8007077 |
cttgaagaaatgttatcaaacactcagttacctttg |
8007042 |
T |
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