View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18317_low_111 (Length: 235)

Name: NF18317_low_111
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18317_low_111
NF18317_low_111
[»] chr3 (28 HSPs)
chr3 (1-126)||(47763588-47763713)
chr3 (127-214)||(40851690-40851777)
chr3 (127-225)||(43720007-43720105)
chr3 (127-225)||(2229900-2229998)
chr3 (151-225)||(27033592-27033666)
chr3 (139-225)||(34373645-34373731)
chr3 (129-225)||(34373750-34373846)
chr3 (135-225)||(19830491-19830583)
chr3 (139-219)||(46167322-46167402)
chr3 (122-216)||(550885-550979)
chr3 (125-219)||(12402881-12402975)
chr3 (135-228)||(48084744-48084837)
chr3 (138-224)||(52859441-52859528)
chr3 (129-205)||(32577451-32577526)
chr3 (135-194)||(3009174-3009233)
chr3 (135-194)||(31523749-31523808)
chr3 (135-194)||(42613015-42613074)
chr3 (135-228)||(36354320-36354413)
chr3 (160-216)||(566843-566898)
chr3 (135-195)||(20485808-20485868)
chr3 (135-194)||(49679351-49679410)
chr3 (130-168)||(25506612-25506650)
chr3 (138-194)||(27959045-27959101)
chr3 (160-228)||(2310261-2310327)
chr3 (135-195)||(31523633-31523694)
chr3 (135-203)||(778901-778969)
chr3 (139-183)||(31996801-31996845)
chr3 (135-203)||(33338243-33338310)
[»] chr6 (16 HSPs)
chr6 (125-225)||(4804363-4804463)
chr6 (127-225)||(32737791-32737889)
chr6 (127-225)||(29698080-29698178)
chr6 (126-225)||(1249206-1249305)
chr6 (126-225)||(7162000-7162099)
chr6 (125-225)||(21159429-21159525)
chr6 (151-225)||(17944103-17944177)
chr6 (153-219)||(30460763-30460829)
chr6 (155-225)||(12412582-12412652)
chr6 (135-225)||(27826463-27826553)
chr6 (135-228)||(227621-227714)
chr6 (155-205)||(17398774-17398824)
chr6 (159-225)||(1518338-1518404)
chr6 (160-225)||(1516249-1516314)
chr6 (160-219)||(17275921-17275980)
chr6 (185-225)||(13089809-13089849)
[»] chr5 (24 HSPs)
chr5 (127-225)||(32129677-32129775)
chr5 (127-225)||(4895795-4895893)
chr5 (135-225)||(39902340-39902430)
chr5 (127-225)||(13032036-13032133)
chr5 (135-225)||(35660669-35660759)
chr5 (127-225)||(37266648-37266746)
chr5 (127-225)||(1475698-1475796)
chr5 (127-225)||(40753222-40753320)
chr5 (128-225)||(4592719-4592815)
chr5 (135-219)||(11775717-11775802)
chr5 (127-225)||(8441031-8441129)
chr5 (139-225)||(14349733-14349818)
chr5 (135-225)||(18625481-18625571)
chr5 (154-205)||(43309062-43309113)
chr5 (127-219)||(34827111-34827201)
chr5 (155-229)||(3057210-3057284)
chr5 (122-228)||(3057328-3057434)
chr5 (160-218)||(32793324-32793382)
chr5 (135-225)||(10173873-10173959)
chr5 (135-195)||(23253718-23253778)
chr5 (135-193)||(38283828-38283886)
chr5 (135-194)||(36290537-36290596)
chr5 (161-225)||(28142835-28142901)
chr5 (160-198)||(30355218-30355256)
[»] chr4 (35 HSPs)
chr4 (127-225)||(12153088-12153186)
chr4 (127-225)||(5763222-5763320)
chr4 (127-225)||(12241468-12241566)
chr4 (127-225)||(34778338-34778436)
chr4 (127-225)||(56558196-56558294)
chr4 (127-219)||(52018700-52018792)
chr4 (135-225)||(23610567-23610657)
chr4 (127-228)||(18207097-18207198)
chr4 (124-225)||(19901978-19902079)
chr4 (135-225)||(38079780-38079870)
chr4 (125-217)||(17080708-17080800)
chr4 (146-225)||(3952230-3952309)
chr4 (127-225)||(33247190-33247286)
chr4 (127-225)||(39862434-39862532)
chr4 (138-217)||(12312571-12312650)
chr4 (127-225)||(5416525-5416625)
chr4 (127-225)||(47922135-47922233)
chr4 (138-225)||(33262612-33262699)
chr4 (135-205)||(24073542-24073612)
chr4 (168-228)||(30567859-30567919)
chr4 (141-217)||(26428574-26428650)
chr4 (135-194)||(37002332-37002391)
chr4 (135-194)||(56269158-56269217)
chr4 (135-225)||(31862280-31862370)
chr4 (169-225)||(43447640-43447697)
chr4 (135-194)||(5524382-5524441)
chr4 (135-189)||(25442271-25442325)
chr4 (155-225)||(33841864-33841934)
chr4 (135-219)||(3326441-3326526)
chr4 (135-228)||(47922424-47922517)
chr4 (135-190)||(5361378-5361433)
chr4 (154-219)||(32366433-32366498)
chr4 (135-195)||(36688153-36688214)
chr4 (139-183)||(23119486-23119530)
chr4 (138-194)||(28701915-28701971)
[»] chr1 (23 HSPs)
chr1 (127-225)||(12380970-12381068)
chr1 (127-225)||(12385037-12385135)
chr1 (127-225)||(7841770-7841868)
chr1 (126-219)||(45977938-45978031)
chr1 (126-219)||(50484302-50484395)
chr1 (135-225)||(12151692-12151782)
chr1 (137-225)||(50294123-50294211)
chr1 (127-225)||(23862015-23862114)
chr1 (135-225)||(40328201-40328293)
chr1 (138-218)||(40988643-40988723)
chr1 (135-225)||(2845190-2845281)
chr1 (125-225)||(48327213-48327314)
chr1 (169-228)||(45970805-45970864)
chr1 (156-225)||(46608437-46608504)
chr1 (127-194)||(680101-680168)
chr1 (135-194)||(30077725-30077784)
chr1 (128-171)||(32361374-32361417)
chr1 (154-205)||(42720837-42720888)
chr1 (135-201)||(1609622-1609688)
chr1 (135-205)||(5047460-5047530)
chr1 (135-228)||(18976362-18976452)
chr1 (135-225)||(23916013-23916101)
chr1 (129-194)||(30210801-30210866)
[»] scaffold0012 (1 HSPs)
scaffold0012 (127-228)||(207980-208081)
[»] chr8 (20 HSPs)
chr8 (127-225)||(30426729-30426827)
chr8 (127-225)||(41511179-41511277)
chr8 (127-225)||(36991273-36991371)
chr8 (135-225)||(28069644-28069734)
chr8 (139-225)||(28318962-28319048)
chr8 (135-195)||(5033031-5033091)
chr8 (128-225)||(40695307-40695404)
chr8 (127-225)||(12177624-12177722)
chr8 (127-225)||(12422052-12422150)
chr8 (135-225)||(24101941-24102031)
chr8 (135-219)||(8412179-8412263)
chr8 (135-225)||(10652677-10652768)
chr8 (127-225)||(10672572-10672670)
chr8 (139-224)||(27490067-27490152)
chr8 (135-228)||(45113195-45113288)
chr8 (144-219)||(37966508-37966583)
chr8 (138-225)||(44859227-44859314)
chr8 (135-194)||(34612498-34612557)
chr8 (135-187)||(44888560-44888612)
chr8 (157-203)||(21492730-21492777)
[»] chr7 (28 HSPs)
chr7 (127-225)||(21151069-21151167)
chr7 (139-225)||(7362497-7362583)
chr7 (136-228)||(45260484-45260576)
chr7 (138-225)||(9559114-9559201)
chr7 (127-225)||(12139245-12139341)
chr7 (130-225)||(16366438-16366533)
chr7 (129-225)||(47226134-47226229)
chr7 (135-225)||(18198181-18198271)
chr7 (135-225)||(44647890-44647977)
chr7 (135-225)||(25084788-25084878)
chr7 (135-225)||(4888392-4888482)
chr7 (135-224)||(29630973-29631062)
chr7 (135-228)||(47500340-47500433)
chr7 (135-228)||(33450431-33450524)
chr7 (135-228)||(34986003-34986095)
chr7 (129-194)||(6882149-6882214)
chr7 (129-194)||(32916098-32916163)
chr7 (135-194)||(19889115-19889174)
chr7 (135-194)||(32915884-32915943)
chr7 (155-225)||(40019626-40019696)
chr7 (185-228)||(39855870-39855913)
chr7 (139-194)||(47080360-47080415)
chr7 (139-194)||(47799981-47800036)
chr7 (135-189)||(8607966-8608020)
chr7 (139-201)||(21945784-21945846)
chr7 (138-191)||(36726331-36726384)
chr7 (154-194)||(30588489-30588529)
chr7 (135-187)||(47271205-47271257)
[»] chr2 (22 HSPs)
chr2 (127-225)||(35316742-35316840)
chr2 (135-225)||(39465700-39465790)
chr2 (135-225)||(28564816-28564907)
chr2 (135-225)||(13238606-13238696)
chr2 (126-224)||(41983401-41983498)
chr2 (138-224)||(374499-374585)
chr2 (127-225)||(23259547-23259645)
chr2 (135-215)||(2061302-2061382)
chr2 (151-225)||(45625122-45625196)
chr2 (126-195)||(10877618-10877686)
chr2 (139-211)||(12949399-12949471)
chr2 (135-194)||(8988791-8988850)
chr2 (135-194)||(29188588-29188647)
chr2 (138-192)||(42075456-42075510)
chr2 (139-194)||(374932-374987)
chr2 (135-194)||(23459927-23459986)
chr2 (143-194)||(3354844-3354895)
chr2 (135-195)||(375042-375103)
chr2 (154-203)||(30824122-30824171)
chr2 (139-204)||(38397012-38397076)
chr2 (154-203)||(41073021-41073070)
chr2 (135-203)||(6591144-6591212)
[»] scaffold0250 (1 HSPs)
scaffold0250 (127-225)||(7064-7162)
[»] scaffold0006 (1 HSPs)
scaffold0006 (138-228)||(73897-73987)
[»] scaffold0035 (1 HSPs)
scaffold0035 (127-228)||(16454-16555)
[»] scaffold0456 (1 HSPs)
scaffold0456 (155-225)||(13641-13711)
[»] scaffold0126 (1 HSPs)
scaffold0126 (139-219)||(22508-22588)
[»] scaffold0009 (1 HSPs)
scaffold0009 (161-225)||(6495-6559)
[»] scaffold0008 (1 HSPs)
scaffold0008 (135-205)||(9278-9348)
[»] scaffold0171 (1 HSPs)
scaffold0171 (135-194)||(17387-17446)
[»] scaffold0468 (1 HSPs)
scaffold0468 (159-228)||(5559-5628)


Alignment Details
Target: chr3 (Bit Score: 118; Significance: 2e-60; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47763588 - 47763713
Alignment:
Q  1 ttgttgccactgctcaaagtttctggcagatttgcaaggagaaacgatggaatcgcaaatgcgatgaacttctttgagagatttctgaacttaaactaca 100  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47763588 ttgttgccgctgctcaaagtttctggcggatttgcaaggagaaacgatggaatcgcaaatgcgatgaacttctttgagagatttctgaacttaaactaca 47763687  T
Q  101 aatccaatccttggtgtgttgaagtg 126  Q
    ||||||||||||||||||||||||||    
T  47763688 aatccaatccttggtgtgttgaagtg 47763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 40851690 - 40851777
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatat 214  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40851690 gggttaggatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatat 40851777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 43720105 - 43720007
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  43720105 gggttaggatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatg 43720007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 2229900 - 2229998
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  2229900 gggttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 2229998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 27033592 - 27033666
Alignment:
Q  151 tgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27033592 tgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 27033666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 34373731 - 34373645
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatg 34373645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 34373750 - 34373846
Alignment:
Q  129 gttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||| |||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34373750 gttaggatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 34373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 19830583 - 19830491
Alignment:
Q  135 atcctctccattt-atatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa-gtaaaatataattactgatg 225  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  19830583 atcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgatg 19830491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 46167322 - 46167402
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataatta 46167402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 550979 - 550885
Alignment:
Q  122 aagtggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataa 216  Q
    |||||| ||||  ||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||    
T  550979 aagtggagttaagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataa 550885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 12402881 - 12402975
Alignment:
Q  125 tggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatctt-gaaaaaagtaaaatataatta 219  Q
    ||||||||| ||| ||||||||||| ||||||| |||||  | |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12402881 tggggttaggatc-tctccatttatgtgtttcttcattttcttaatttggagagataaagacacataaaatcttaaaaaaaagtaaaatataatta 12402975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 48084744 - 48084837
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||||||||||| |  |||||||||||| | ||||||||||||| ||||||| ||||| ||||||||| ||||| ||||||| ||||||||    
T  48084744 atcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatg 48084837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 52859528 - 52859441
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattactgat 224  Q
    |||| ||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||| ||||    
T  52859528 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgat 52859441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 32577451 - 32577526
Alignment:
Q  129 gttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    ||||| ||||| |||||||| |   |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32577451 gttaggatcctttccatttaaactcttctccatttcttctatttggagagataaagacaca-aaaatcttgaaaaaa 32577526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 3009174 - 3009233
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  3009174 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 3009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 31523808 - 31523749
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  31523808 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 31523749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 42613015 - 42613074
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  42613015 atcctctccatttataaatttctccatttgttctatttagagagataaagacacataaaa 42613074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 36354413 - 36354320
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    |||||||||||||| |  | |||| ||||| ||||||| || ||||||||||||| ||||||||||||| |||| |  ||||||| ||||||||    
T  36354413 atcctctccatttacaattctctcaatttcctcaatttagaaagataaagacacaaaaaatcttgaaaatagtatacaataattaatgatgatg 36354320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 566898 - 566843
Alignment:
Q  160 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataa 216  Q
    |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||    
T  566898 atttcttccatttggagagataaaaatacataaaatcttga-aaaagtaaaatataa 566843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 20485868 - 20485808
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 195  Q
    |||||||||||||| || ||||||||||||| | ||||||||||||| | |||||||||||    
T  20485868 atcctctccatttaaatttttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 49679410 - 49679351
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||  |||| |||||||||||||||||||||    
T  49679410 atcctctccatttataaatttctccatttgtttcatttagagagataaagacacataaaa 49679351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 25506650 - 25506612
Alignment:
Q  130 ttagcatcctctccatttatatgtttctccatttcttca 168  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  25506650 ttaggatcctctccatttatatgtttctccatttcttca 25506612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 27959045 - 27959101
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    |||||||||||||  ||||||||||| ||| |||| |||||||||| ||||||||||    
T  27959045 ctctccatttataaatttctccatttgttccatttagagagataaatacacataaaa 27959101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 2310261 - 2310327
Alignment:
Q  160 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    |||||||| |||| |||||||||||||||  ||||| || || ||||||||| ||||||| ||||||||    
T  2310261 atttcttccatttagagagataaagacac--aaaattttaaagaaagtaaaaaataattaatgatgatg 2310327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 31523633 - 31523694
Alignment:
Q  135 atcctctccatttatatgtttctccatttctt-caatttggagagataaagacacataaaat 195  Q
    ||||||||||||||||  ||||||||||| || ||||||||||||| | ||||||| |||||    
T  31523633 atcctctccatttataaatttctccatttattgcaatttggagagagatagacacaaaaaat 31523694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 778969 - 778901
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 203  Q
    |||||||||||||| |  ||||||  ||||||| ||||| ||||||||||| ||| |||||||| ||||    
T  778969 atcctctccatttaaacttttctctctttcttccatttgtagagataaagaaacaaaaaatcttaaaaa 778901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 31996801 - 31996845
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaa 183  Q
    |||||||||||  || ||||||||||||| |||||||||||||||    
T  31996801 tctccatttattagtgtctccatttcttctatttggagagataaa 31996845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 33338310 - 33338243
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 203  Q
    |||||||||||||| |   || |||||||||||  |||| ||||||||||||||| |||||||||||||    
T  33338310 atcctctccatttaaactcttttccatttcttccgtttgaagagataaagacaca-aaaatcttgaaaa 33338243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 4804363 - 4804463
Alignment:
Q  125 tggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgat 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  4804363 tggggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 4804462  T
Q  225 g 225  Q
    |    
T  4804463 g 4804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 32737791 - 32737889
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  32737791 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 32737889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 29698080 - 29698178
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29698080 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 29698178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 1249305 - 1249206
Alignment:
Q  126 ggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1249305 ggggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 1249206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 7162000 - 7162099
Alignment:
Q  126 ggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7162000 ggggttaggatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 7162099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 21159525 - 21159429
Alignment:
Q  125 tggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgat 224  Q
    ||||||||| ||||||||| ||||| |||    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21159525 tggggttaggatcctctccgtttatgtgt----ccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 21159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 17944103 - 17944177
Alignment:
Q  151 tgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  17944103 tgtttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatg 17944177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 30460763 - 30460829
Alignment:
Q  153 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30460763 tttcttcatttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 30460829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 12412582 - 12412652
Alignment:
Q  155 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| |||||    
T  12412582 tctccatttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatg 12412652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 27826463 - 27826553
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||  ||  ||||| ||||||||||||| |||||    
T  27826463 atcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatg 27826553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 227714 - 227621
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||| ||||||| || |||||||||||| ||||||||||||||| ||||||| ||| | |||||||| |||||| ||||| | ||||||||    
T  227714 atcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatg 227621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 17398824 - 17398774
Alignment:
Q  155 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  17398824 tctccctttcctccatttggagagataaagacacataaaatcttgaaaaaa 17398774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 1518404 - 1518338
Alignment:
Q  159 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||  ||||| | ||||||| ||||||||||| || |||||||||||||||||||| |||||    
T  1518404 catttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatg 1518338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 1516314 - 1516249
Alignment:
Q  160 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||  ||||| | ||||||| ||||||||||| || |||||||||||||||||||| |||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatg 1516249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 17275921 - 17275980
Alignment:
Q  160 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    |||| ||| |||||||||||||||||  ||||||||||| |||||| ||||| |||||||    
T  17275921 atttattctatttggagagataaagatgcataaaatcttaaaaaaaataaaaaataatta 17275980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 13089849 - 13089809
Alignment:
Q  185 acacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||| ||||||||| ||||||||||||| |||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatg 13089809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 32129775 - 32129677
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  32129775 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 32129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 4895893 - 4895795
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  4895893 gggttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 4895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 39902340 - 39902430
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  39902340 atcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatg 39902430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 13032036 - 13032133
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  13032036 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt-aaaaaaataaaatataattaatgatg 13032133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 35660759 - 35660669
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35660759 atcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 35660669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 37266648 - 37266746
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  37266648 gggttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgatg 37266746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 1475796 - 1475698
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  1475796 gggttaggatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 1475698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 40753320 - 40753222
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| || ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  40753320 gggttaggatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 40753222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 4592719 - 4592815
Alignment:
Q  128 ggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||    
T  4592719 ggttagaatcctctccatttatgtgtttctccatttcttcaatttggagagat-aatacacataaaatattgaaaaaagtaaaatataattaatgatg 4592815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 11775717 - 11775802
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttg-aaaaaagtaaaatataatta 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  11775717 atcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataatta 11775802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 8441129 - 8441031
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||| ||||||||||| ||||||||| |||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||| |||||    
T  8441129 gggttaggatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatg 8441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 14349733 - 14349818
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  14349733 tctccatttatgtgtttctccatttctttaatttggaaagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgatg 14349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 18625571 - 18625481
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| ||||| || |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  18625571 atcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 18625481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 43309062 - 43309113
Alignment:
Q  154 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43309062 ttctccatttcttcaatttgaagagataaagacacataaaatcttgaaaaaa 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 34827111 - 34827201
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttg-aaaaaagtaaaatataatta 219  Q
    ||||||| |||||| |||||||||||||| |||||||||| |||||| ||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  34827111 gggttaggatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacac--aaaattttgaaaaaaagtaaaatataatta 34827201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 3057284 - 3057210
Alignment:
Q  155 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatgt 229  Q
    ||||||||||||| ||||| |||||||||||||| |||| | || |||||||||||||||||||| |||| ||||    
T  3057284 tctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgt 3057210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 3057328 - 3057434
Alignment:
Q  122 aagtggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattact 221  Q
    |||||| ||||  ||| ||||||||||| | | ||||  ||||||| |||| |||||||||||||||| ||||  |||||||||||| || ||||||| |    
T  3057328 aagtggagttaagatcatctccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaat 3057427  T
Q  222 gatgatg 228  Q
    |||||||    
T  3057428 gatgatg 3057434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 32793324 - 32793382
Alignment:
Q  160 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatt 218  Q
    |||||||  ||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataatt 32793382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 10173873 - 10173959
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| |  ||||||||||| |  ||||||||||||||||||||    ||| ||||||||||||||| ||||||| |||||    
T  10173873 atcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatg 10173959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 23253718 - 23253778
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 195  Q
    ||||| |||||||| || ||||||||||||| | ||||||||||||| |||||||||||||    
T  23253718 atcctatccatttaaatttttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 38283886 - 38283828
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaa 193  Q
    ||||||| |||||| || ||||||||||| | ||||||||||||||| |||||||||||    
T  38283886 atcctcttcatttaaatttttctccatttttacaatttggagagatatagacacataaa 38283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 36290537 - 36290596
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||| | ||||| ||| |||| |||||||||||||||||||||    
T  36290537 atcctctccatttataaattttttcatttgttccatttagagagataaagacacataaaa 36290596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 28142901 - 28142835
Alignment:
Q  161 tttcttcaatttggagagataaagacacataaaa-tcttgaaaaaa-gtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||  |||||||||||||| ||||||||||| |||||||||||||| |||||    
T  28142901 tttcttccatttggaaaggcaaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatg 28142835  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 30355218 - 30355256
Alignment:
Q  160 atttcttcaatttggagagataaagacacataaaatctt 198  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  30355218 atttctttaatttggagagataaagacacaaaaaatctt 30355256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 12153088 - 12153186
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12153088 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12153186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 5763320 - 5763222
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  5763320 gggttaggatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 5763222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 12241566 - 12241468
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12241566 gggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12241468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 34778338 - 34778436
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34778338 gggttagaatcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 34778436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 56558196 - 56558294
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  56558196 gggttaggatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 56558294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 52018700 - 52018792
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52018700 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataatta 52018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 23610567 - 23610657
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  23610567 atcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatg 23610657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 18207198 - 18207097
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatga 226  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  18207198 gggttaggatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatga 18207099  T
Q  227 tg 228  Q
    ||    
T  18207098 tg 18207097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 19902079 - 19901978
Alignment:
Q  124 gtggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactga 223  Q
    |||||||||  ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  19902079 gtggggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatga 19901980  T
Q  224 tg 225  Q
    ||    
T  19901979 tg 19901978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 38079870 - 38079780
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38079870 atcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 38079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 17080800 - 17080708
Alignment:
Q  125 tggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataat 217  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17080800 tggggttaggatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataat 17080708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 3952309 - 3952230
Alignment:
Q  146 ttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 3952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 33247286 - 33247190
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||    
T  33247286 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatg 33247190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 39862434 - 39862532
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  39862434 gggttaggatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatg 39862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 12312650 - 12312571
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataat 217  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  12312650 ctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataat 12312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 5416625 - 5416525
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatctt--gaaaaaagtaaaatataattactgat 224  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| ||||    
T  5416625 gggttagaatcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgat 5416526  T
Q  225 g 225  Q
    |    
T  5416525 g 5416525  T

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Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 47922233 - 47922135
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||| ||| |||||    
T  47922233 gggttaggatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatg 47922135  T

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Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 33262699 - 33262612
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||| | ||| || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  33262699 ctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatg 33262612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 24073542 - 24073612
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||    
T  24073542 atcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaaaaaa 24073612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 30567859 - 30567919
Alignment:
Q  168 aatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  30567859 aattttgatagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatg 30567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 26428574 - 26428650
Alignment:
Q  141 tccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataat 217  Q
    ||||||||| |  |||||||||||| ||||||||||||||| ||||||| ||| | ||||||||||||||| |||||    
T  26428574 tccatttatgtccttctccatttctacaatttggagagatatagacacacaaatttttgaaaaaagtaaaaaataat 26428650  T

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Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 37002391 - 37002332
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  37002391 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 37002332  T

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Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 56269217 - 56269158
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  56269217 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 56269158  T

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Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 31862370 - 31862280
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||| ||||||||  ||||| |||||| | ||||||||||||| ||||||| ||||| ||  ||||||||||| ||||||| |||||    
T  31862370 atcctctcaatttatatccttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatg 31862280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 43447697 - 43447640
Alignment:
Q  169 atttggagagataaagacacataaaa-tcttgaaaaaagtaaaatataattactgatg 225  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  43447697 atttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatg 43447640  T

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Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 5524382 - 5524441
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||| ||||||| ||| |||| |||||||||||||||||||||    
T  5524382 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaaa 5524441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 25442325 - 25442271
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacaca 189  Q
    |||||||||||||||    |||||||||||||| |||||||||||||||||||||    
T  25442325 atcctctccatttatggccttctccatttcttccatttggagagataaagacaca 25442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 33841934 - 33841864
Alignment:
Q  155 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||| || ||||||| ||||||||||||| ||||||||||||| |||| |  ||||||| |||||    
T  33841934 tctccatttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatg 33841864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 3326441 - 3326526
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagat-aaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    ||||||||||||||| |  | ||||||||||| ||||| ||||||| ||||||| | ||| | ||||||||||||||| |||||||    
T  3326441 atcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataatta 3326526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 47922517 - 47922424
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||||||||||| | ||| ||||||||| | ||||| || |||| | ||||| ||| | ||||||||||||||| |||||||  |||||||    
T  47922517 atcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatgatg 47922424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 5361378 - 5361433
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacat 190  Q
    ||||||||||||||||  ||||| ||||| ||| |||| |||||||||||||||||    
T  5361378 atcctctccatttataaatttcttcatttgttccatttagagagataaagacacat 5361433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 32366498 - 32366433
Alignment:
Q  154 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    |||||||||||||| |||| |||||| |||||| | || ||| || |||||||||||| |||||||    
T  32366498 ttctccatttcttctatttagagagacaaagacgcgtagaattttaaaaaaagtaaaaaataatta 32366433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 36688153 - 36688214
Alignment:
Q  135 atcctctccatttatatgtttctccatttctt-caatttggagagataaagacacataaaat 195  Q
    ||||||||||||||||  ||||||||||| || ||||||||||||| | ||||||| |||||    
T  36688153 atcctctccatttataaatttctccatttgttgcaatttggagagagatagacacaaaaaat 36688214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 23119530 - 23119486
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaa 183  Q
    |||||||||||  || ||||||||||||| |||||||||||||||    
T  23119530 tctccatttattagtctctccatttcttccatttggagagataaa 23119486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 28701971 - 28701915
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    |||||||||||||  ||||||||||| ||  ||||  ||||||||||||||||||||    
T  28701971 ctctccatttataaatttctccatttgttttatttaaagagataaagacacataaaa 28701915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 12381068 - 12380970
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12381068 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12380970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 12385135 - 12385037
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12385135 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12385037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 7841868 - 7841770
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7841868 gggttaggattctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 7841770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 45977938 - 45978031
Alignment:
Q  126 ggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45977938 ggggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataatta 45978031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 50484302 - 50484395
Alignment:
Q  126 ggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50484302 ggggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 50484395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 12151692 - 12151782
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12151692 atcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12151782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 50294211 - 50294123
Alignment:
Q  137 cctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  50294211 cctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 50294123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 23862114 - 23862015
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaa-aaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| |||| || |||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  23862114 gggttagaatcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatg 23862015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 40328201 - 40328293
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagat-aaagacacataaaatcttg-aaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  40328201 atcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgatg 40328293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 40988643 - 40988723
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatt 218  Q
    |||||||||||||  ||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  40988643 ctctccatttataactttctccattttttctatttggagagataaagacacacaaaattttgaaaaaagtaaaaaataatt 40988723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 2845190 - 2845281
Alignment:
Q  135 atcctctccatttatatgtttctccatttct-tcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| | |||||| |||||| |||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||| |||||    
T  2845190 atcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatg 2845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 48327314 - 48327213
Alignment:
Q  125 tggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaa-aaaagtaaaatataattactga 223  Q
    ||||||||  ||||||||||||||| ||||| || |||||||| ||||||||| ||||||  ||||||||||||||| |||| ||||||||||||| |||    
T  48327314 tggggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatga 48327215  T
Q  224 tg 225  Q
    ||    
T  48327214 tg 48327213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 45970805 - 45970864
Alignment:
Q  169 atttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  45970805 atttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatgatg 45970864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 46608504 - 46608437
Alignment:
Q  156 ctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||| ||||||||| ||||||||||  ||| | ||||||||||||||| ||||||| |||||    
T  46608504 ctccatttcttccatttggagaaataaagacac--aaagttttgaaaaaagtaaaaaataattaatgatg 46608437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 680168 - 680101
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||| ||||||||||||||||  ||| || ||||  || ||||||||||||||||||||| ||||    
T  680168 gggttaggatcctctccatttataactttatcaatttactctatttggagagataaagacacacaaaa 680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 30077784 - 30077725
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  |||||| |||| ||| |||| |||| ||||||||||||||||    
T  30077784 atcctctccatttataaatttctctatttgttccatttagagaaataaagacacataaaa 30077725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 32361417 - 32361374
Alignment:
Q  128 ggttagcatcctctccatttatatgtttctccatttcttcaatt 171  Q
    |||||| ||||||||||||||||  |||||||||||||||||||    
T  32361417 ggttaggatcctctccatttatacatttctccatttcttcaatt 32361374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 42720888 - 42720837
Alignment:
Q  154 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    |||||||||||||  |||| |||||||||||||||||||| | |||||||||    
T  42720888 ttctccatttctttcatttagagagataaagacacataaagttttgaaaaaa 42720837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 1609688 - 1609622
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaa 201  Q
    ||||||| ||||||| | |||  |||||||||  |||| ||||| ||||||||||||||||||||||    
T  1609688 atcctcttcatttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatcttgaa 1609622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 5047530 - 5047460
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    |||||||||||||||   | ||||||||||||| |||| ||||||||||| |||| ||||  |||||||||    
T  5047530 atcctctccatttattactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaaaaaa 5047460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 18976452 - 18976362
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||||||||||| |  |||| ||||||| | ||||||||||||| | ||||  ||||| ||||||||| ||||| ||||||| ||||||||    
T  18976452 atcctctccatttatgtccttcttcatttctaccatttggagagatataaacac--aaaattttgaaaaaaataaaa-ataattaatgatgatg 18976362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 23916013 - 23916101
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||| ||| ||||||||||| ||  ||||||||| ||||| ||||| ||||| |||||||||||  || ||||||| |||||    
T  23916013 atcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatg 23916101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 30210866 - 30210801
Alignment:
Q  129 gttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||| ||||||||||||||| |  | |||||||| ||| |||| |||||||||||||||| ||||    
T  30210866 gttaggatcctctccatttatgttgtcctccatttattctatttagagagataaagacacaaaaaa 30210801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 207980 - 208081
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatga 226  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  207980 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatga 208079  T
Q  227 tg 228  Q
    ||    
T  208080 tg 208081  T

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Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 30426827 - 30426729
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30426827 gggttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 30426729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 41511179 - 41511277
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  41511179 gggttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatg 41511277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 36991273 - 36991371
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  36991273 gggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatg 36991371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 28069644 - 28069734
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  28069644 atcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 28069734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 28319048 - 28318962
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||    
T  28319048 tctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatg 28318962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 5033031 - 5033091
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5033031 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 40695404 - 40695307
Alignment:
Q  128 ggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||| |||||| | |||||| | ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||    
T  40695404 ggttaggatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatg 40695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 12177722 - 12177624
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||  |||||||| ||||  |||||||||||||||| |||||||||| || |||||    
T  12177722 gggttaggatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatg 12177624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 12422150 - 12422052
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||  |||||||| ||||  |||||||||||||||| |||||||||| || |||||    
T  12422150 gggttaggatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatg 12422052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 24101941 - 24102031
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| ||||| || |||| || ||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  24101941 atcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatg 24102031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 8412179 - 8412263
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    ||||||||||||||| | ||||| ||||| ||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  8412179 atcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataatta 8412263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 10652768 - 10652677
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttg-aaaaaagt-aaaatataattactgatg 225  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| |||||    
T  10652768 atcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgatg 10652677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 10672670 - 10672572
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| ||||||| ||||||| ||||| ||||||||||||||||||| | ||||||||| || ||||  |||||||||||||| |||||    
T  10672670 gggttagtatcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatg 10672572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 27490152 - 27490067
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgat 224  Q
    ||||||||||| | |||||| |||||||| ||||| ||||| ||| | ||||||||||||||||||||||||||||||||| ||||    
T  27490152 tctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgat 27490067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 45113195 - 45113288
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    |||||||||||||||||  |||| ||||| | | ||||||||||||| ||||||||||||| ||||||||| ||||| ||||||| ||||||||    
T  45113195 atcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatgatg 45113288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 37966583 - 37966508
Alignment:
Q  144 atttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    |||||| | ||||||||||||||  ||||||||||||||||| ||||||||  || ||||||||||||||||||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataatta 37966508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 44859314 - 44859227
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||  ||||| ||| |||||| ||||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  44859314 ctctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatg 44859227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 34612498 - 34612557
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||| ||||||| ||| |||| |||||||||||||||||||||    
T  34612498 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaaa 34612557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 44888560 - 44888612
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagaca 187  Q
    ||||||||||||||||  | ||||||||| ||| |||||||||||||||||||    
T  44888560 atcctctccatttataattgtctccattttttctatttggagagataaagaca 44888612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 21492730 - 21492777
Alignment:
Q  157 tccatttcttcaatttggagagataaagacaca-taaaatcttgaaaa 203  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||    
T  21492730 tccatttcttccatttggagagataaagacacacaaaaatcttgaaaa 21492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 21151069 - 21151167
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21151069 gggttaggattctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 21151167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 7362497 - 7362583
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7362497 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 7362583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 45260576 - 45260484
Alignment:
Q  136 tcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45260576 tcctctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatg 45260484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 9559201 - 9559114
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  9559201 ctctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 9559114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 12139245 - 12139341
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||| |||||    
T  12139245 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataa--acacataaaatcttaaaaaaagtaaaatataattaatgatg 12139341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 16366438 - 16366533
Alignment:
Q  130 ttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  16366438 ttaggatcatctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatg 16366533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 47226229 - 47226134
Alignment:
Q  129 gttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  47226229 gttaggatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatg 47226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 18198181 - 18198271
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||| |||||    
T  18198181 atcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatg 18198271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 44647890 - 44647977
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  44647890 atcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatg 44647977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 25084878 - 25084788
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  25084878 atcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatg 25084788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 4888392 - 4888482
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||    
T  4888392 atcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatg 4888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 29630973 - 29631062
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgat 224  Q
    |||||||||||| || | ||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||  ||||||| ||||    
T  29630973 atcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgat 29631062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 47500433 - 47500340
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||||||||||| |  |||||||||||| | |||| |||||||| ||||||| ||||| ||||||||| ||||| ||||||| ||||||||    
T  47500433 atcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatg 47500340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 33450431 - 33450524
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||| ||||||| |  |||||||||||| | ||||||||||||| | ||||| ||||| ||||||||| ||||| ||||||| ||||||||    
T  33450431 atcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatgatg 33450524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 34986095 - 34986003
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttg-aaaaaagtaaaatataattactgatgatg 228  Q
    ||||||||||||||| | ||||||||||||| | ||||||||||||| ||  ||||||||| ||| |||||| ||||| ||||||| ||||||||    
T  34986095 atcctctccatttatgtctttctccatttctaccatttggagagatatag--acataaaattttgaaaaaaaataaaaaataattaatgatgatg 34986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 6882214 - 6882149
Alignment:
Q  129 gttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||| |||||||| |||||||  ||||||||||| ||| ||||| ||||||||||||||||||||    
T  6882214 gttaggatcctctcaatttataactttctccatttgttccatttgaagagataaagacacataaaa 6882149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 32916098 - 32916163
Alignment:
Q  129 gttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||| ||||||||||||||||  ||||||||||||||| |||| |||||||||| ||||| ||||    
T  32916098 gttagaatcctctccatttataactttctccatttcttccattttgagagataaatacacacaaaa 32916163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 19889174 - 19889115
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||| ||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  19889174 atcctctccatctataaatttctccatttattccatttagagagataaagacacataaaa 19889115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 32915884 - 32915943
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    |||||| |||||||| |  |||||||||||||| ||||||||||||||||||||| ||||    
T  32915884 atcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaa 32915943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 40019626 - 40019696
Alignment:
Q  155 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||| ||||| || ||||||||||||||| ||||| |||||||||||||||||| ||  |||||| |||||    
T  40019626 tctcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatg 40019696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 39855913 - 39855870
Alignment:
Q  185 acacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||    
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatg 39855870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 47080360 - 47080415
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||  ||||||||||| ||| |||| |||||||| ||||||||||||    
T  47080360 tctccatttataaatttctccatttgttctatttagagagatagagacacataaaa 47080415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 47800036 - 47799981
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||  ||| ||||||| ||| |||| |||||||||||||||||||||    
T  47800036 tctccatttataaatttttccatttgttctatttagagagataaagacacataaaa 47799981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 8607966 - 8608020
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacaca 189  Q
    ||||||||||||||||  ||||||||||| ||| ||||||| ||||| |||||||    
T  8607966 atcctctccatttataactttctccatttgttccatttggaaagatagagacaca 8608020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 21945846 - 21945784
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaa 201  Q
    |||||||||| || ||||| ||||||| | ||||||||||||| ||||||| ||| |||||||    
T  21945846 tctccatttaaatttttcttcatttctactatttggagagatatagacacaaaaattcttgaa 21945784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 36726384 - 36726331
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacata 191  Q
    ||||||||||||  || ||||||||||||  ||||||||||||||||| |||||    
T  36726384 ctctccatttatcagtctctccatttcttttatttggagagataaagatacata 36726331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 30588489 - 30588529
Alignment:
Q  154 ttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    |||||||||| ||| |||| |||||||||||||||||||||    
T  30588489 ttctccatttgttccatttagagagataaagacacataaaa 30588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 47271257 - 47271205
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagaca 187  Q
    ||||||| ||||| | | |||||| | ||||||||||||||||||||||||||    
T  47271257 atcctcttcatttgtctctttctctaattcttcaatttggagagataaagaca 47271205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 35316742 - 35316840
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  35316742 gggttaggatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatg 35316840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 39465700 - 39465790
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  39465700 atcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatg 39465790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 28564816 - 28564907
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatc-ttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  28564816 atcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatg 28564907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 13238606 - 13238696
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  13238606 atcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 13238696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 41983498 - 41983401
Alignment:
Q  126 ggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgat 224  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  41983498 ggggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 374585 - 374499
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgat 224  Q
    |||||||||||| ||||||||| ||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  374585 ctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 23259645 - 23259547
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||| ||| |||||||| |||||| |||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||| |||||    
T  23259645 gggttagaatcatcttcatttatacgtttcttcatttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatg 23259547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 2061302 - 2061382
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatata 215  Q
    |||||||||||||||  || |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  2061302 atcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 45625196 - 45625122
Alignment:
Q  151 tgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||| ||||| |||||    
T  45625196 tgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatg 45625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 10877618 - 10877686
Alignment:
Q  126 ggggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 195  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  10877618 ggggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaat 10877686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 12949399 - 12949471
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaa 211  Q
    ||||||| ||| | ||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  12949399 tctccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaaagtaaaa 12949471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 8988791 - 8988850
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  8988791 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 8988850  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 29188588 - 29188647
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  29188588 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 29188647  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 42075510 - 42075456
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataa 192  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  42075510 ctctccatttattagtttatccatttcttccatttggagagataaagacacataa 42075456  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 374932 - 374987
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  374932 tctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 374987  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 23459986 - 23459927
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||||||||| ||| |||  |||||||||||||||||||||    
T  23459986 atcctctccatttataaatttctccatttgttccattcagagagataaagacacataaaa 23459927  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 3354895 - 3354844
Alignment:
Q  143 catttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||  ||||||||||| ||| |||| |||||||||||||||||||||    
T  3354895 catttataaatttctccatttgttctatttagagagataaagacacataaaa 3354844  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 375103 - 375042
Alignment:
Q  135 atcctctccatttatatgtttctccatttctt-caatttggagagataaagacacataaaat 195  Q
    ||||||||||||||||  ||||||||||| || ||||||||||||| | ||||||| |||||    
T  375103 atcctctccatttataaatttctccatttgttgcaatttggagagagatagacacaaaaaat 375042  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 30824122 - 30824171
Alignment:
Q  154 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 203  Q
    |||||||||||||| |||| |||||||| ||||||| |||||||| ||||    
T  30824122 ttctccatttcttccatttagagagatatagacacaaaaaatcttaaaaa 30824171  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 38397012 - 38397076
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa 204  Q
    ||||||||||| | | |||||||||| |||||||||||||||| ||||| | ||||| ||||||||    
T  38397012 tctccatttatttttctctccatttcatcaatttggagagatatagacaaaaaaaat-ttgaaaaa 38397076  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 41073070 - 41073021
Alignment:
Q  154 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 203  Q
    |||||||||||||  |||| |||||||||||||||| |||||||| ||||    
T  41073070 ttctccatttctttcatttagagagataaagacacaaaaaatcttaaaaa 41073021  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 6591212 - 6591144
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaa 203  Q
    ||||||||||||||||  | ||| |||||| || ||||| | | ||||||||||| |||||||||||||    
T  6591212 atcctctccatttataattatcttcatttcctccatttgaaaatataaagacacaaaaaatcttgaaaa 6591144  T

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Target: scaffold0250 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 7064 - 7162
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  7064 gggttaggatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatg 7162  T

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Target: scaffold0006 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 73987 - 73897
Alignment:
Q  138 ctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  73987 ctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatg 73897  T

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Target: scaffold0035 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 16555 - 16454
Alignment:
Q  127 gggttagcatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatga 226  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||| ||||||    
T  16555 gggttaggatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatga 16456  T
Q  227 tg 228  Q
    ||    
T  16455 tg 16454  T

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Target: scaffold0456 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 13641 - 13711
Alignment:
Q  155 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13641 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 13711  T

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Target: scaffold0126 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 22588 - 22508
Alignment:
Q  139 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataatta 219  Q
    ||||||||||| | | ||||||||||||  |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  22588 tctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataatta 22508  T

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Target: scaffold0009 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 6559 - 6495
Alignment:
Q  161 tttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatg 225  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatg 6495  T

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Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 9348 - 9278
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaa 205  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||    
T  9348 atcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatcttaaaaaaa 9278  T

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Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 17446 - 17387
Alignment:
Q  135 atcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaa 194  Q
    ||||||||||||||||  ||||| ||||| ||| |||| |||||||||||||||||||||    
T  17446 atcctctccatttataaatttcttcatttgttccatttagagagataaagacacataaaa 17387  T

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Target: scaffold0468 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 5559 - 5628
Alignment:
Q  159 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattactgatgatg 228  Q
    ||||||||| ||||||||||||||||||| | | ||  |||||||||||| || ||||||| ||||||||    
T  5559 catttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatgatg 5628  T

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