View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_low_113 (Length: 234)
Name: NF18317_low_113
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_low_113 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 32888229 - 32888034
Alignment:
| Q |
17 |
aaggccaacagagtaaaacgcagcagtaccagtagggttaaagctagcaccacccattgcattaccaatcatggtaaacaagaaaacaagaagaaaaaca |
116 |
Q |
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| T |
32888229 |
aaggccaacagagtaaaacgcagcagtaccagtagggttaaagctagcaccacccattgcattaccaatcatggtaaacaagaaaacaagaagaaaaaca |
32888130 |
T |
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| Q |
117 |
agggtagttgttacaatcaaagaagggtaagggaaaccattgtatgaaacgttttgaagatcgagggctttggttatagcacttgaaactatacct |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32888129 |
agggtagttgttacaatcaaagaagggtaagggaaaccattgtatgaaacgttttgaagatcgagggctttggttatagcacttgaaactatacct |
32888034 |
T |
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