View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_low_123 (Length: 221)
Name: NF18317_low_123
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_low_123 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 32888295 - 32888213
Alignment:
| Q |
139 |
gaacataagagtgtatagtacctgagcagggaaacgaagagccatagagaaaagggtatcagaaccaaggccaacagagtaaa |
221 |
Q |
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| T |
32888295 |
gaacgtaagagtgtatagtacctgagcagggaaacgaagagccatagagaaaagggtatcagaaccaaggccaacagagtaaa |
32888213 |
T |
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Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 10341586 - 10341635
Alignment:
| Q |
158 |
acctgagcagggaaacgaagagccatagagaaaagggtatcagaaccaag |
207 |
Q |
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| T |
10341586 |
acctgagcagggaaacgaatagccatagagataagagtatcagaaccaag |
10341635 |
T |
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