View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_low_63 (Length: 309)
Name: NF18317_low_63
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_low_63 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 27 - 297
Target Start/End: Original strand, 43057856 - 43058121
Alignment:
| Q |
27 |
tatcttaggcgaaccaacagtttatgcactaactataaacatcatcagtggtataaatgaatgggaggagattagtcaacaagcttggcagtgggtgacc |
126 |
Q |
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| T |
43057856 |
tatcttaggcgaaccaacagtttatgcactaactataaacatcatcaatggtataaatgaatgggatgagattagtcaacaagcttggcagtgggtgacc |
43057955 |
T |
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| Q |
127 |
accagtttgatggcatggagtacactgaatcaatgatattttgacaaatacccatactatacaatcaattgtgtttttgactgaatgcctataccataat |
226 |
Q |
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| T |
43057956 |
accagtttgatggcatggagtacactgaatcaatgatattttgacaaatac-----ctatacaatcaattgtgtttttgactgaatgcctataccataat |
43058050 |
T |
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| Q |
227 |
tgggaaaaagaatgatatctaaatattgtgcaagtatgttcggtttgcaatttgaaaactgcattttgatg |
297 |
Q |
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| T |
43058051 |
tgggaaaaagaatgatatctaaatattgtgcaagtatgttcggtttgcaatttgaaaactgcatttggatg |
43058121 |
T |
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