View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_low_75 (Length: 298)
Name: NF18317_low_75
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_low_75 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 6259606 - 6259323
Alignment:
| Q |
1 |
ttggttaaacttctctctgatcctgacaaaatcgctcatcaaaattctatatgcctacttgactgtgtacttccccgaagactcctctttccacattact |
100 |
Q |
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| T |
6259606 |
ttggttaaacttctctctgatcctgacaaaatcgctcatcaaaattctatatgcctacttgactgtgtacttccccgaagactcctctttccacattact |
6259507 |
T |
|
| Q |
101 |
ctatctatctcgccctctcaaaatgtactaccatccaattcaattagtaattgtgctaataattacttcccaaatgaacaattctcttctccaaacgaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6259506 |
ctatctatctcgccctctcaaaatgtactaccatccaattcaattagtaattgtgctaataattacttcccaaatgaacaattctcttctccaaacgaac |
6259407 |
T |
|
| Q |
201 |
gtccaatcccaactctcatccatctgtccattgatgacgaaaacagtctactgtgcttattctttatgatacaccctctcaccc |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6259406 |
gtccaatcccaactctcatccatctgtccattgatgacgaaaacagtctactgtgcttattctttatgatacaccctctcaccc |
6259323 |
T |
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