View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_low_94 (Length: 259)
Name: NF18317_low_94
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_low_94 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 38752809 - 38753058
Alignment:
| Q |
1 |
taatcataatcatttatcaccatctttatagacnnnnnnngaattaaacaagaggaaagggaagattattagaacgatgaatattttaattacataaggt |
100 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
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| T |
38752809 |
taatcataatcatttatcaccatctttatagacaaaaaaagaattaaacaagaggaaagggaagattattagaacgatgaatattt-aatttcataaggt |
38752907 |
T |
|
| Q |
101 |
tcccttaatggcctacatgttaattattttatttcatataaaactatatcaccaaatttttatttgttagaaaatgagattcttatttaaaaacatcctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38752908 |
tcccttaatggcctacatgttaattattttatttcatataaaactatatcaccaaaattttatttgttagaaaatgagattcttatttaaaaacatcctt |
38753007 |
T |
|
| Q |
201 |
atgtgacaaaattaagagatagcattaaccaaacccattttgtttgatgat |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38753008 |
atgtgacaaaattaagagatagcattaaccaaacccattttgtttgatgat |
38753058 |
T |
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